Mock Version: 4.1 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/python-sigprofilermatrixgenerator.spec'], chrootPath='/var/lib/mock/fedora-rawhide-x86_64-1686089735.297851/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1000gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.4j52ahp0:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueprintOutput=True) Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.4j52ahp0:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', 'f9e7add200e148d0be4288d99f6908eb', '-D', '/var/lib/mock/fedora-rawhide-x86_64-1686089735.297851/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.4j52ahp0:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/python-sigprofilermatrixgenerator.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1686009600 Wrote: /builddir/build/SRPMS/python-sigprofilermatrixgenerator-1.2.17-1.fc39.src.rpm Child return code was: 0 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -br --target x86_64 --nodeps /builddir/build/SPECS/python-sigprofilermatrixgenerator.spec'], chrootPath='/var/lib/mock/fedora-rawhide-x86_64-1686089735.297851/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1000gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.4j52ahp0:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueraiseExc=FalseprintOutput=True) Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.4j52ahp0:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '80c0c642e7f84adda3cfef12dd5694c2', '-D', '/var/lib/mock/fedora-rawhide-x86_64-1686089735.297851/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.4j52ahp0:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -br --target x86_64 --nodeps /builddir/build/SPECS/python-sigprofilermatrixgenerator.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1686009600 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.8BzLNY + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf SigProfilerMatrixGenerator-1.2.17 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/SigProfilerMatrixGenerator-1.2.17.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd SigProfilerMatrixGenerator-1.2.17 + /usr/bin/mkdir -p SPECPARTS + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + RPM_EC=0 ++ jobs -p + exit 0 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.GvHn4a + umask 022 + cd /builddir/build/BUILD + cd SigProfilerMatrixGenerator-1.2.17 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(pip) >= 19' + echo 'python3dist(packaging)' + '[' -f pyproject.toml ']' + '[' -f setup.py ']' + echo 'python3dist(setuptools) >= 40.8' + echo 'python3dist(wheel)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/SigProfilerMatrixGenerator-1.2.17/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + TMPDIR=/builddir/build/BUILD/SigProfilerMatrixGenerator-1.2.17/.pyproject-builddir + RPM_TOXENV=py311 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/SigProfilerMatrixGenerator-1.2.17/pyproject-wheeldir --output /builddir/build/BUILD/python-sigprofilermatrixgenerator-1.2.17-1.fc39.x86_64-pyproject-buildrequires Handling setuptools >= 40.8 from default build backend Requirement not satisfied: setuptools >= 40.8 Handling wheel from default build backend Requirement not satisfied: wheel Exiting dependency generation pass: build backend + cat /builddir/build/BUILD/python-sigprofilermatrixgenerator-1.2.17-1.fc39.x86_64-pyproject-buildrequires + rm -rfv '*.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/python-sigprofilermatrixgenerator-1.2.17-1.fc39.buildreqs.nosrc.rpm Child return code was: 11 Dynamic buildrequires detected Going to install missing buildrequires. See root.log for details. ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -br --target x86_64 --nodeps /builddir/build/SPECS/python-sigprofilermatrixgenerator.spec'], chrootPath='/var/lib/mock/fedora-rawhide-x86_64-1686089735.297851/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1000gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.4j52ahp0:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueraiseExc=FalseprintOutput=True) Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.4j52ahp0:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '1e313e20a9f54b41a4800cc7ec42c357', '-D', '/var/lib/mock/fedora-rawhide-x86_64-1686089735.297851/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.4j52ahp0:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -br --target x86_64 --nodeps /builddir/build/SPECS/python-sigprofilermatrixgenerator.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1686009600 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.hh426g + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf SigProfilerMatrixGenerator-1.2.17 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/SigProfilerMatrixGenerator-1.2.17.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd SigProfilerMatrixGenerator-1.2.17 + /usr/bin/mkdir -p SPECPARTS + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + RPM_EC=0 ++ jobs -p + exit 0 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.luISCn + umask 022 + cd /builddir/build/BUILD + cd SigProfilerMatrixGenerator-1.2.17 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(pip) >= 19' + echo 'python3dist(packaging)' + '[' -f pyproject.toml ']' + '[' -f setup.py ']' + echo 'python3dist(setuptools) >= 40.8' + echo 'python3dist(wheel)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/SigProfilerMatrixGenerator-1.2.17/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + TMPDIR=/builddir/build/BUILD/SigProfilerMatrixGenerator-1.2.17/.pyproject-builddir + RPM_TOXENV=py311 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/SigProfilerMatrixGenerator-1.2.17/pyproject-wheeldir --output /builddir/build/BUILD/python-sigprofilermatrixgenerator-1.2.17-1.fc39.x86_64-pyproject-buildrequires Handling setuptools >= 40.8 from default build backend Requirement satisfied: setuptools >= 40.8 (installed: setuptools 67.8.0) Handling wheel from default build backend Requirement satisfied: wheel (installed: wheel 0.40.0) running egg_info writing SigProfilerMatrixGenerator.egg-info/PKG-INFO writing dependency_links to SigProfilerMatrixGenerator.egg-info/dependency_links.txt writing requirements to SigProfilerMatrixGenerator.egg-info/requires.txt writing top-level names to SigProfilerMatrixGenerator.egg-info/top_level.txt reading manifest file 'SigProfilerMatrixGenerator.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE' writing manifest file 'SigProfilerMatrixGenerator.egg-info/SOURCES.txt' Handling wheel from get_requires_for_build_wheel Requirement satisfied: wheel (installed: wheel 0.40.0) running dist_info writing SigProfilerMatrixGenerator.egg-info/PKG-INFO writing dependency_links to SigProfilerMatrixGenerator.egg-info/dependency_links.txt writing requirements to SigProfilerMatrixGenerator.egg-info/requires.txt writing top-level names to SigProfilerMatrixGenerator.egg-info/top_level.txt reading manifest file 'SigProfilerMatrixGenerator.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE' writing manifest file 'SigProfilerMatrixGenerator.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/SigProfilerMatrixGenerator-1.2.17/SigProfilerMatrixGenerator-1.2.17.dist-info' Handling matplotlib (>=2.2.2) from hook generated metadata: Requires-Dist (SigProfilerMatrixGenerator) Requirement not satisfied: matplotlib (>=2.2.2) Handling sigProfilerPlotting (>=1.3.11) from hook generated metadata: Requires-Dist (SigProfilerMatrixGenerator) Requirement not satisfied: sigProfilerPlotting (>=1.3.11) Handling statsmodels (>=0.9.0) from hook generated metadata: Requires-Dist (SigProfilerMatrixGenerator) Requirement not satisfied: statsmodels (>=0.9.0) Handling scipy (>=1.1.0) from hook generated metadata: Requires-Dist (SigProfilerMatrixGenerator) Requirement not satisfied: scipy (>=1.1.0) Handling numpy (>=1.18.5) from hook generated metadata: Requires-Dist (SigProfilerMatrixGenerator) Requirement not satisfied: numpy (>=1.18.5) Handling pandas (<2.0.0,>=0.23.4) from hook generated metadata: Requires-Dist (SigProfilerMatrixGenerator) Requirement not satisfied: pandas (<2.0.0,>=0.23.4) Handling pytest ; extra == 'tests' from hook generated metadata: Requires-Dist (SigProfilerMatrixGenerator) Ignoring alien requirement: pytest ; extra == 'tests' + cat /builddir/build/BUILD/python-sigprofilermatrixgenerator-1.2.17-1.fc39.x86_64-pyproject-buildrequires + rm -rfv SigProfilerMatrixGenerator-1.2.17.dist-info/ removed 'SigProfilerMatrixGenerator-1.2.17.dist-info/LICENSE' removed 'SigProfilerMatrixGenerator-1.2.17.dist-info/METADATA' removed 'SigProfilerMatrixGenerator-1.2.17.dist-info/top_level.txt' removed directory 'SigProfilerMatrixGenerator-1.2.17.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/python-sigprofilermatrixgenerator-1.2.17-1.fc39.buildreqs.nosrc.rpm Child return code was: 11 Dynamic buildrequires detected Going to install missing buildrequires. See root.log for details. ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -br --target x86_64 --nodeps /builddir/build/SPECS/python-sigprofilermatrixgenerator.spec'], chrootPath='/var/lib/mock/fedora-rawhide-x86_64-1686089735.297851/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1000gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.4j52ahp0:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueraiseExc=FalseprintOutput=True) Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.4j52ahp0:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '1bbacc8debc3457bb0b2c7cd4d779781', '-D', '/var/lib/mock/fedora-rawhide-x86_64-1686089735.297851/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.4j52ahp0:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -br --target x86_64 --nodeps /builddir/build/SPECS/python-sigprofilermatrixgenerator.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1686009600 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.6kPkg8 + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf SigProfilerMatrixGenerator-1.2.17 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/SigProfilerMatrixGenerator-1.2.17.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd SigProfilerMatrixGenerator-1.2.17 + /usr/bin/mkdir -p SPECPARTS + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + RPM_EC=0 ++ jobs -p + exit 0 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.yNf8T0 + umask 022 + cd /builddir/build/BUILD + cd SigProfilerMatrixGenerator-1.2.17 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(pip) >= 19' + echo 'python3dist(packaging)' + '[' -f pyproject.toml ']' + '[' -f setup.py ']' + echo 'python3dist(setuptools) >= 40.8' + echo 'python3dist(wheel)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/SigProfilerMatrixGenerator-1.2.17/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + TMPDIR=/builddir/build/BUILD/SigProfilerMatrixGenerator-1.2.17/.pyproject-builddir + RPM_TOXENV=py311 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/SigProfilerMatrixGenerator-1.2.17/pyproject-wheeldir --output /builddir/build/BUILD/python-sigprofilermatrixgenerator-1.2.17-1.fc39.x86_64-pyproject-buildrequires Handling setuptools >= 40.8 from default build backend Requirement satisfied: setuptools >= 40.8 (installed: setuptools 67.8.0) Handling wheel from default build backend Requirement satisfied: wheel (installed: wheel 0.40.0) running egg_info writing SigProfilerMatrixGenerator.egg-info/PKG-INFO writing dependency_links to SigProfilerMatrixGenerator.egg-info/dependency_links.txt writing requirements to SigProfilerMatrixGenerator.egg-info/requires.txt writing top-level names to SigProfilerMatrixGenerator.egg-info/top_level.txt reading manifest file 'SigProfilerMatrixGenerator.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE' writing manifest file 'SigProfilerMatrixGenerator.egg-info/SOURCES.txt' Handling wheel from get_requires_for_build_wheel Requirement satisfied: wheel (installed: wheel 0.40.0) running dist_info writing SigProfilerMatrixGenerator.egg-info/PKG-INFO writing dependency_links to SigProfilerMatrixGenerator.egg-info/dependency_links.txt writing requirements to SigProfilerMatrixGenerator.egg-info/requires.txt writing top-level names to SigProfilerMatrixGenerator.egg-info/top_level.txt reading manifest file 'SigProfilerMatrixGenerator.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE' writing manifest file 'SigProfilerMatrixGenerator.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/SigProfilerMatrixGenerator-1.2.17/SigProfilerMatrixGenerator-1.2.17.dist-info' Handling matplotlib (>=2.2.2) from hook generated metadata: Requires-Dist (SigProfilerMatrixGenerator) Requirement satisfied: matplotlib (>=2.2.2) (installed: matplotlib 3.7.1) Handling sigProfilerPlotting (>=1.3.11) from hook generated metadata: Requires-Dist (SigProfilerMatrixGenerator) Requirement satisfied: sigProfilerPlotting (>=1.3.11) (installed: sigProfilerPlotting 1.3.13) Handling statsmodels (>=0.9.0) from hook generated metadata: Requires-Dist (SigProfilerMatrixGenerator) Requirement satisfied: statsmodels (>=0.9.0) (installed: statsmodels 0.14.0) Handling scipy (>=1.1.0) from hook generated metadata: Requires-Dist (SigProfilerMatrixGenerator) Requirement satisfied: scipy (>=1.1.0) (installed: scipy 1.10.1) Handling numpy (>=1.18.5) from hook generated metadata: Requires-Dist (SigProfilerMatrixGenerator) Requirement satisfied: numpy (>=1.18.5) (installed: numpy 1.24.3) Handling pandas (<2.0.0,>=0.23.4) from hook generated metadata: Requires-Dist (SigProfilerMatrixGenerator) Requirement satisfied: pandas (<2.0.0,>=0.23.4) (installed: pandas 1.5.3) Handling pytest ; extra == 'tests' from hook generated metadata: Requires-Dist (SigProfilerMatrixGenerator) Ignoring alien requirement: pytest ; extra == 'tests' + cat /builddir/build/BUILD/python-sigprofilermatrixgenerator-1.2.17-1.fc39.x86_64-pyproject-buildrequires + rm -rfv SigProfilerMatrixGenerator-1.2.17.dist-info/ removed 'SigProfilerMatrixGenerator-1.2.17.dist-info/LICENSE' removed 'SigProfilerMatrixGenerator-1.2.17.dist-info/METADATA' removed 'SigProfilerMatrixGenerator-1.2.17.dist-info/top_level.txt' removed directory 'SigProfilerMatrixGenerator-1.2.17.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/python-sigprofilermatrixgenerator-1.2.17-1.fc39.buildreqs.nosrc.rpm Child return code was: 11 Dynamic buildrequires detected Going to install missing buildrequires. See root.log for details. ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -ba --noprep --target x86_64 --nodeps /builddir/build/SPECS/python-sigprofilermatrixgenerator.spec'], chrootPath='/var/lib/mock/fedora-rawhide-x86_64-1686089735.297851/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1000gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.4j52ahp0:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueprintOutput=True) Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.4j52ahp0:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '113fefb4858145518f7b3447ca33f310', '-D', '/var/lib/mock/fedora-rawhide-x86_64-1686089735.297851/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.4j52ahp0:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -ba --noprep --target x86_64 --nodeps /builddir/build/SPECS/python-sigprofilermatrixgenerator.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1686009600 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.le4xpS + umask 022 + cd /builddir/build/BUILD + cd SigProfilerMatrixGenerator-1.2.17 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(pip) >= 19' + echo 'python3dist(packaging)' + '[' -f pyproject.toml ']' + '[' -f setup.py ']' + echo 'python3dist(setuptools) >= 40.8' + echo 'python3dist(wheel)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/SigProfilerMatrixGenerator-1.2.17/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + TMPDIR=/builddir/build/BUILD/SigProfilerMatrixGenerator-1.2.17/.pyproject-builddir + RPM_TOXENV=py311 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/SigProfilerMatrixGenerator-1.2.17/pyproject-wheeldir --output /builddir/build/BUILD/python-sigprofilermatrixgenerator-1.2.17-1.fc39.x86_64-pyproject-buildrequires Handling setuptools >= 40.8 from default build backend Requirement satisfied: setuptools >= 40.8 (installed: setuptools 67.8.0) Handling wheel from default build backend Requirement satisfied: wheel (installed: wheel 0.40.0) running egg_info writing SigProfilerMatrixGenerator.egg-info/PKG-INFO writing dependency_links to SigProfilerMatrixGenerator.egg-info/dependency_links.txt writing requirements to SigProfilerMatrixGenerator.egg-info/requires.txt writing top-level names to SigProfilerMatrixGenerator.egg-info/top_level.txt reading manifest file 'SigProfilerMatrixGenerator.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE' writing manifest file 'SigProfilerMatrixGenerator.egg-info/SOURCES.txt' Handling wheel from get_requires_for_build_wheel Requirement satisfied: wheel (installed: wheel 0.40.0) running dist_info writing SigProfilerMatrixGenerator.egg-info/PKG-INFO writing dependency_links to SigProfilerMatrixGenerator.egg-info/dependency_links.txt writing requirements to SigProfilerMatrixGenerator.egg-info/requires.txt writing top-level names to SigProfilerMatrixGenerator.egg-info/top_level.txt reading manifest file 'SigProfilerMatrixGenerator.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE' writing manifest file 'SigProfilerMatrixGenerator.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/SigProfilerMatrixGenerator-1.2.17/SigProfilerMatrixGenerator-1.2.17.dist-info' Handling matplotlib (>=2.2.2) from hook generated metadata: Requires-Dist (SigProfilerMatrixGenerator) Requirement satisfied: matplotlib (>=2.2.2) (installed: matplotlib 3.7.1) Handling sigProfilerPlotting (>=1.3.11) from hook generated metadata: Requires-Dist (SigProfilerMatrixGenerator) Requirement satisfied: sigProfilerPlotting (>=1.3.11) (installed: sigProfilerPlotting 1.3.13) Handling statsmodels (>=0.9.0) from hook generated metadata: Requires-Dist (SigProfilerMatrixGenerator) Requirement satisfied: statsmodels (>=0.9.0) (installed: statsmodels 0.14.0) Handling scipy (>=1.1.0) from hook generated metadata: Requires-Dist (SigProfilerMatrixGenerator) Requirement satisfied: scipy (>=1.1.0) (installed: scipy 1.10.1) Handling numpy (>=1.18.5) from hook generated metadata: Requires-Dist (SigProfilerMatrixGenerator) Requirement satisfied: numpy (>=1.18.5) (installed: numpy 1.24.3) Handling pandas (<2.0.0,>=0.23.4) from hook generated metadata: Requires-Dist (SigProfilerMatrixGenerator) Requirement satisfied: pandas (<2.0.0,>=0.23.4) (installed: pandas 1.5.3) Handling pytest ; extra == 'tests' from hook generated metadata: Requires-Dist (SigProfilerMatrixGenerator) Ignoring alien requirement: pytest ; extra == 'tests' + cat /builddir/build/BUILD/python-sigprofilermatrixgenerator-1.2.17-1.fc39.x86_64-pyproject-buildrequires + rm -rfv SigProfilerMatrixGenerator-1.2.17.dist-info/ removed 'SigProfilerMatrixGenerator-1.2.17.dist-info/LICENSE' removed 'SigProfilerMatrixGenerator-1.2.17.dist-info/METADATA' removed 'SigProfilerMatrixGenerator-1.2.17.dist-info/top_level.txt' removed directory 'SigProfilerMatrixGenerator-1.2.17.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.iegyuf + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd SigProfilerMatrixGenerator-1.2.17 + mkdir -p /builddir/build/BUILD/SigProfilerMatrixGenerator-1.2.17/.pyproject-builddir + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + TMPDIR=/builddir/build/BUILD/SigProfilerMatrixGenerator-1.2.17/.pyproject-builddir + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_wheel.py /builddir/build/BUILD/SigProfilerMatrixGenerator-1.2.17/pyproject-wheeldir Processing /builddir/build/BUILD/SigProfilerMatrixGenerator-1.2.17 Preparing metadata (pyproject.toml): started Running command Preparing metadata (pyproject.toml) running dist_info creating /builddir/build/BUILD/SigProfilerMatrixGenerator-1.2.17/.pyproject-builddir/pip-modern-metadata-uafb5pig/SigProfilerMatrixGenerator.egg-info writing /builddir/build/BUILD/SigProfilerMatrixGenerator-1.2.17/.pyproject-builddir/pip-modern-metadata-uafb5pig/SigProfilerMatrixGenerator.egg-info/PKG-INFO writing dependency_links to /builddir/build/BUILD/SigProfilerMatrixGenerator-1.2.17/.pyproject-builddir/pip-modern-metadata-uafb5pig/SigProfilerMatrixGenerator.egg-info/dependency_links.txt writing requirements to /builddir/build/BUILD/SigProfilerMatrixGenerator-1.2.17/.pyproject-builddir/pip-modern-metadata-uafb5pig/SigProfilerMatrixGenerator.egg-info/requires.txt writing top-level names to /builddir/build/BUILD/SigProfilerMatrixGenerator-1.2.17/.pyproject-builddir/pip-modern-metadata-uafb5pig/SigProfilerMatrixGenerator.egg-info/top_level.txt writing manifest file '/builddir/build/BUILD/SigProfilerMatrixGenerator-1.2.17/.pyproject-builddir/pip-modern-metadata-uafb5pig/SigProfilerMatrixGenerator.egg-info/SOURCES.txt' reading manifest file '/builddir/build/BUILD/SigProfilerMatrixGenerator-1.2.17/.pyproject-builddir/pip-modern-metadata-uafb5pig/SigProfilerMatrixGenerator.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE' writing manifest file '/builddir/build/BUILD/SigProfilerMatrixGenerator-1.2.17/.pyproject-builddir/pip-modern-metadata-uafb5pig/SigProfilerMatrixGenerator.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/SigProfilerMatrixGenerator-1.2.17/.pyproject-builddir/pip-modern-metadata-uafb5pig/SigProfilerMatrixGenerator-1.2.17.dist-info' Preparing metadata (pyproject.toml): finished with status 'done' Building wheels for collected packages: SigProfilerMatrixGenerator Building wheel for SigProfilerMatrixGenerator (pyproject.toml): started Running command Building wheel for SigProfilerMatrixGenerator (pyproject.toml) running bdist_wheel running build running build_py creating build creating build/lib creating build/lib/SigProfilerMatrixGenerator copying SigProfilerMatrixGenerator/version.py -> build/lib/SigProfilerMatrixGenerator copying SigProfilerMatrixGenerator/test_helpers.py -> build/lib/SigProfilerMatrixGenerator copying SigProfilerMatrixGenerator/install.py -> build/lib/SigProfilerMatrixGenerator copying SigProfilerMatrixGenerator/__init__.py -> build/lib/SigProfilerMatrixGenerator running egg_info writing SigProfilerMatrixGenerator.egg-info/PKG-INFO writing dependency_links to SigProfilerMatrixGenerator.egg-info/dependency_links.txt writing requirements to SigProfilerMatrixGenerator.egg-info/requires.txt writing top-level names to SigProfilerMatrixGenerator.egg-info/top_level.txt reading manifest file 'SigProfilerMatrixGenerator.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE' writing manifest file 'SigProfilerMatrixGenerator.egg-info/SOURCES.txt' /usr/lib/python3.11/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'SigProfilerMatrixGenerator.controllers' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'SigProfilerMatrixGenerator.controllers' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'SigProfilerMatrixGenerator.controllers' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'SigProfilerMatrixGenerator.controllers' to be distributed and are already explicitly excluding 'SigProfilerMatrixGenerator.controllers' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3.11/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'SigProfilerMatrixGenerator.references.CNV' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'SigProfilerMatrixGenerator.references.CNV' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'SigProfilerMatrixGenerator.references.CNV' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'SigProfilerMatrixGenerator.references.CNV' to be distributed and are already explicitly excluding 'SigProfilerMatrixGenerator.references.CNV' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3.11/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'SigProfilerMatrixGenerator.references.CNV.example_input' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'SigProfilerMatrixGenerator.references.CNV.example_input' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'SigProfilerMatrixGenerator.references.CNV.example_input' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'SigProfilerMatrixGenerator.references.CNV.example_input' to be distributed and are already explicitly excluding 'SigProfilerMatrixGenerator.references.CNV.example_input' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3.11/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'SigProfilerMatrixGenerator.references.CNV.example_output' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'SigProfilerMatrixGenerator.references.CNV.example_output' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'SigProfilerMatrixGenerator.references.CNV.example_output' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'SigProfilerMatrixGenerator.references.CNV.example_output' to be distributed and are already explicitly excluding 'SigProfilerMatrixGenerator.references.CNV.example_output' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3.11/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'SigProfilerMatrixGenerator.references.SV.example_input' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'SigProfilerMatrixGenerator.references.SV.example_input' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'SigProfilerMatrixGenerator.references.SV.example_input' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'SigProfilerMatrixGenerator.references.SV.example_input' to be distributed and are already explicitly excluding 'SigProfilerMatrixGenerator.references.SV.example_input' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3.11/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'SigProfilerMatrixGenerator.references.SV.example_input.PCAWG' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'SigProfilerMatrixGenerator.references.SV.example_input.PCAWG' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'SigProfilerMatrixGenerator.references.SV.example_input.PCAWG' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'SigProfilerMatrixGenerator.references.SV.example_input.PCAWG' to be distributed and are already explicitly excluding 'SigProfilerMatrixGenerator.references.SV.example_input.PCAWG' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3.11/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'SigProfilerMatrixGenerator.references.SV.example_output' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'SigProfilerMatrixGenerator.references.SV.example_output' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'SigProfilerMatrixGenerator.references.SV.example_output' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'SigProfilerMatrixGenerator.references.SV.example_output' to be distributed and are already explicitly excluding 'SigProfilerMatrixGenerator.references.SV.example_output' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3.11/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.context_distributions' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.context_distributions' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.context_distributions' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.context_distributions' to be distributed and are already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.context_distributions' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3.11/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.exome' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.exome' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.exome' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.exome' to be distributed and are already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.exome' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3.11/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.exome.GRCh37' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.exome.GRCh37' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.exome.GRCh37' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.exome.GRCh37' to be distributed and are already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.exome.GRCh37' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3.11/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.exome.GRCh38' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.exome.GRCh38' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.exome.GRCh38' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.exome.GRCh38' to be distributed and are already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.exome.GRCh38' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3.11/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.exome.c_elegans' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.exome.c_elegans' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.exome.c_elegans' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.exome.c_elegans' to be distributed and are already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.exome.c_elegans' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3.11/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.exome.dog' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.exome.dog' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.exome.dog' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.exome.dog' to be distributed and are already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.exome.dog' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3.11/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.exome.ebv' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.exome.ebv' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.exome.ebv' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.exome.ebv' to be distributed and are already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.exome.ebv' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3.11/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm10' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm10' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm10' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm10' to be distributed and are already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm10' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3.11/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm39' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm39' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm39' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm39' to be distributed and are already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm39' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3.11/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm9' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm9' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm9' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm9' to be distributed and are already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm9' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3.11/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.exome.rn6' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.exome.rn6' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.exome.rn6' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.exome.rn6' to be distributed and are already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.exome.rn6' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3.11/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.exome.yeast' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.exome.yeast' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.exome.yeast' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.exome.yeast' to be distributed and are already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.exome.yeast' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3.11/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts' to be distributed and are already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3.11/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.GRCh37' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.GRCh37' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.GRCh37' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.GRCh37' to be distributed and are already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.GRCh37' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3.11/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.GRCh38' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.GRCh38' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.GRCh38' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.GRCh38' to be distributed and are already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.GRCh38' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3.11/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.c_elegans' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.c_elegans' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.c_elegans' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.c_elegans' to be distributed and are already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.c_elegans' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3.11/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.dog' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.dog' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.dog' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.dog' to be distributed and are already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.dog' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3.11/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.ebv' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.ebv' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.ebv' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.ebv' to be distributed and are already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.ebv' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3.11/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm10' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm10' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm10' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm10' to be distributed and are already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm10' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3.11/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm39' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm39' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm39' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm39' to be distributed and are already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm39' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3.11/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm9' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm9' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm9' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm9' to be distributed and are already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm9' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3.11/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.rn6' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.rn6' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.rn6' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.rn6' to be distributed and are already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.rn6' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3.11/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.yeast' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.yeast' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.yeast' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.yeast' to be distributed and are already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.yeast' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3.11/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED' to be distributed and are already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3.11/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.GRCh37' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.GRCh37' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.GRCh37' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.GRCh37' to be distributed and are already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.GRCh37' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3.11/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.GRCh38' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.GRCh38' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.GRCh38' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.GRCh38' to be distributed and are already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.GRCh38' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3.11/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.c_elegans' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.c_elegans' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.c_elegans' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.c_elegans' to be distributed and are already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.c_elegans' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3.11/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.dog' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.dog' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.dog' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.dog' to be distributed and are already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.dog' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3.11/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm10' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm10' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm10' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm10' to be distributed and are already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm10' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3.11/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm39' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm39' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm39' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm39' to be distributed and are already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm39' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3.11/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm9' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm9' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm9' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm9' to be distributed and are already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm9' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3.11/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.rn6' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.rn6' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.rn6' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.rn6' to be distributed and are already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.rn6' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3.11/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.yeast' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.yeast' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.yeast' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.yeast' to be distributed and are already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.yeast' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3.11/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'SigProfilerMatrixGenerator.references.vcf_files.BRCA_example.SNV' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'SigProfilerMatrixGenerator.references.vcf_files.BRCA_example.SNV' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'SigProfilerMatrixGenerator.references.vcf_files.BRCA_example.SNV' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'SigProfilerMatrixGenerator.references.vcf_files.BRCA_example.SNV' to be distributed and are already explicitly excluding 'SigProfilerMatrixGenerator.references.vcf_files.BRCA_example.SNV' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3.11/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'SigProfilerMatrixGenerator.references.vcf_files.GRCh37_bench.input' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'SigProfilerMatrixGenerator.references.vcf_files.GRCh37_bench.input' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'SigProfilerMatrixGenerator.references.vcf_files.GRCh37_bench.input' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'SigProfilerMatrixGenerator.references.vcf_files.GRCh37_bench.input' to be distributed and are already explicitly excluding 'SigProfilerMatrixGenerator.references.vcf_files.GRCh37_bench.input' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3.11/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'SigProfilerMatrixGenerator.references.vcf_files.GRCh38_bench.input' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'SigProfilerMatrixGenerator.references.vcf_files.GRCh38_bench.input' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'SigProfilerMatrixGenerator.references.vcf_files.GRCh38_bench.input' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'SigProfilerMatrixGenerator.references.vcf_files.GRCh38_bench.input' to be distributed and are already explicitly excluding 'SigProfilerMatrixGenerator.references.vcf_files.GRCh38_bench.input' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3.11/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'SigProfilerMatrixGenerator.references.vcf_files.mm10_bench.input' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'SigProfilerMatrixGenerator.references.vcf_files.mm10_bench.input' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'SigProfilerMatrixGenerator.references.vcf_files.mm10_bench.input' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'SigProfilerMatrixGenerator.references.vcf_files.mm10_bench.input' to be distributed and are already explicitly excluding 'SigProfilerMatrixGenerator.references.vcf_files.mm10_bench.input' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3.11/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'SigProfilerMatrixGenerator.references.vcf_files.mm9_bench.input' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'SigProfilerMatrixGenerator.references.vcf_files.mm9_bench.input' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'SigProfilerMatrixGenerator.references.vcf_files.mm9_bench.input' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'SigProfilerMatrixGenerator.references.vcf_files.mm9_bench.input' to be distributed and are already explicitly excluding 'SigProfilerMatrixGenerator.references.vcf_files.mm9_bench.input' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3.11/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'SigProfilerMatrixGenerator.scripts' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'SigProfilerMatrixGenerator.scripts' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'SigProfilerMatrixGenerator.scripts' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'SigProfilerMatrixGenerator.scripts' to be distributed and are already explicitly excluding 'SigProfilerMatrixGenerator.scripts' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3.11/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'SigProfilerMatrixGenerator.scripts.Benchmark' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'SigProfilerMatrixGenerator.scripts.Benchmark' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'SigProfilerMatrixGenerator.scripts.Benchmark' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'SigProfilerMatrixGenerator.scripts.Benchmark' to be distributed and are already explicitly excluding 'SigProfilerMatrixGenerator.scripts.Benchmark' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) creating build/lib/SigProfilerMatrixGenerator/controllers copying SigProfilerMatrixGenerator/controllers/__init__.py -> build/lib/SigProfilerMatrixGenerator/controllers copying SigProfilerMatrixGenerator/controllers/cli_controller.py -> build/lib/SigProfilerMatrixGenerator/controllers creating build/lib/SigProfilerMatrixGenerator/references creating build/lib/SigProfilerMatrixGenerator/references/CNV copying SigProfilerMatrixGenerator/references/CNV/CNV_features.tsv -> build/lib/SigProfilerMatrixGenerator/references/CNV copying SigProfilerMatrixGenerator/references/CNV/CN_classes_dictionary.txt -> build/lib/SigProfilerMatrixGenerator/references/CNV creating build/lib/SigProfilerMatrixGenerator/references/CNV/example_input copying SigProfilerMatrixGenerator/references/CNV/example_input/Battenberg_test.tsv -> build/lib/SigProfilerMatrixGenerator/references/CNV/example_input copying SigProfilerMatrixGenerator/references/CNV/example_input/all.breast.ascat.summary.sample.tsv -> build/lib/SigProfilerMatrixGenerator/references/CNV/example_input creating build/lib/SigProfilerMatrixGenerator/references/CNV/example_output copying SigProfilerMatrixGenerator/references/CNV/example_output/BATTENBERG-TEST.CNV48.matrix.tsv -> build/lib/SigProfilerMatrixGenerator/references/CNV/example_output creating build/lib/SigProfilerMatrixGenerator/references/SV creating build/lib/SigProfilerMatrixGenerator/references/SV/example_input creating build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11346a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11348a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11352a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11361a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11379a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11384a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11389a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11742a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11743a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11748a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13162a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13167a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13297a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13298a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13306a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD14456a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD14472a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD17973a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD18031a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD22364a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD23566a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24217a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24225a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24303a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24314a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4069a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4103a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4199a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4255a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4606a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4875a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4957a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD6048a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD6414a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7199a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7205a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7238a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7305a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD8832a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD8969a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD8982a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9002a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9064a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9541a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9568a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9572a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9589a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9593a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9755a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9756a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast creating build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA130927.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA270468.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA321048.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA410978.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA413642.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA413758.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA413928.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA499742.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA499746.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501385.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501469.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501576.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501599.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501607.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505478.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505529.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505768.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505918.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA507250.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA515261.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA515347.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA517281.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA517376.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA520203.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528809.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528848.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528876.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528947.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529739.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529747.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529774.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529837.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA530440.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA530512.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA530594.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA530642.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA533704.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA538871.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA538992.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA539008.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA541765.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA541894.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542155.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542181.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542577.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542830.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542879.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA569081.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA570843.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA570896.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG creating build/lib/SigProfilerMatrixGenerator/references/SV/example_output copying SigProfilerMatrixGenerator/references/SV/example_output/560-Breast.SV32.annotated.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_output copying SigProfilerMatrixGenerator/references/SV/example_output/560-Breast.SV32.matrix.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_output copying SigProfilerMatrixGenerator/references/SV/example_output/560-Breast_RS32_counts_aggregated.pdf -> build/lib/SigProfilerMatrixGenerator/references/SV/example_output creating build/lib/SigProfilerMatrixGenerator/references/chromosomes creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_1536.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_1536_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_24.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_24_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_384.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_384_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6144.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6144_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_96.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_96_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS186.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS186_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_1536.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_1536_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_24.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_24_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_384.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_384_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6144.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6144_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_96.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_96_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS186.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS186_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_1536.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_1536_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_24.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_24_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_384.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_384_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6144.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6144_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_96.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_96_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS186.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS186_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_1536.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_1536_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_24.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_24_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_384.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_384_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6144.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6144_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_96.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_96_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS186.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS186_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_1536.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_1536_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_24.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_24_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_384.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_384_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6144.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6144_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_96.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_96_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_1536.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_192.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_24.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_384.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_6.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_6144.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_96.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_DBS.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_DBS186.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_female_BED.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_exome_old.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_signatures_96.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_1536_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_192_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_24_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_384_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_6144_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_6_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_96_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_DBS186_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_DBS_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome copying SigProfilerMatrixGenerator/references/chromosomes/exome/__init__.py -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh37 copying SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh37/GRCh37_exome.interval_list -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh37 creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh38 copying SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh38/GRCh38_exome.interval_list -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh38 creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/c_elegans copying SigProfilerMatrixGenerator/references/chromosomes/exome/c_elegans/c_elegans_exome.interval_list -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/c_elegans creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/dog copying SigProfilerMatrixGenerator/references/chromosomes/exome/dog/dog_exome.interval_list -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/dog creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/ebv copying SigProfilerMatrixGenerator/references/chromosomes/exome/ebv/ebv_exome.interval_list -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/ebv copying SigProfilerMatrixGenerator/references/chromosomes/exome/ebv/multipleVariableTesting_mar12_2020.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/ebv copying SigProfilerMatrixGenerator/references/chromosomes/exome/ebv/tcga_cyclic_regions(AutoRecovered).csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/ebv creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/mm10 copying SigProfilerMatrixGenerator/references/chromosomes/exome/mm10/mm10_exome.interval_list -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/mm10 creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/mm39 copying SigProfilerMatrixGenerator/references/chromosomes/exome/mm39/mm39_exome.interval_list -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/mm39 creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/mm9 copying SigProfilerMatrixGenerator/references/chromosomes/exome/mm9/mm9_exome.interval_list -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/mm9 creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/rn6 copying SigProfilerMatrixGenerator/references/chromosomes/exome/rn6/rn6_exome.interval_list -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/rn6 creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/yeast copying SigProfilerMatrixGenerator/references/chromosomes/exome/yeast/yeast_exome.interval_list -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/yeast creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/__init__.py -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/10_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/11_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/12_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/13_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/14_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/15_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/16_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/17_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/18_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/19_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/1_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/20_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/21_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/22_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/2_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/3_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/4_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/5_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/6_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/7_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/8_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/9_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/MT_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/X_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/Y_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37 creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/10_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/11_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/12_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/13_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/14_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/15_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/16_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/17_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/18_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/19_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/1_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/20_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/21_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/22_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/2_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/3_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/4_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/5_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/6_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/7_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/8_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/9_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/MT_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/X_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/Y_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38 creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/III_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/II_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/IV_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/I_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/MtDNA_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/V_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/X_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/10_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/11_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/12_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/13_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/14_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/15_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/16_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/17_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/18_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/19_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/1_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/20_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/21_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/22_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/23_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/24_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/25_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/26_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/27_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/28_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/29_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/2_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/30_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/31_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/32_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/33_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/34_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/35_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/36_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/37_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/38_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/3_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/4_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/5_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/6_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/7_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/8_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/9_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/X_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/ebv copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/ebv/gi_82503188_ref_NC_007605_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/ebv creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/10_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/11_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/12_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/13_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/14_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/15_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/16_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/17_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/18_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/19_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/1_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/2_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/3_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/4_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/5_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/6_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/7_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/8_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/9_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/MT_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/X_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/Y_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10 creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/10_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/11_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/12_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/13_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/14_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/15_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/16_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/17_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/18_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/19_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/1_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/2_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/3_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/4_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/5_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/6_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/7_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/8_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/9_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/X_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/Y_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39 creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/10_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/11_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/12_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/13_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/14_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/15_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/16_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/17_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/18_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/19_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/1_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/2_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/3_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/4_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/5_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/6_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/7_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/8_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/9_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/MT_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/X_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/Y_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9 creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/10_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/11_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/12_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/13_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/14_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/15_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/16_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/17_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/18_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/19_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/1_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/20_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/2_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/3_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/4_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/5_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/6_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/7_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/8_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/9_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/MT_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/X_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6 copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/Y_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6 creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/III_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/II_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/IV_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/IX_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/I_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/M_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/VIII_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/VII_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/VI_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/V_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XIII_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XII_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XIV_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XI_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XVI_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XV_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/X_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/__init__.py -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/10_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/11_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/12_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/13_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/14_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/15_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/16_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/17_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/18_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/19_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/1_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/20_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/21_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/22_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/2_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/3_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/4_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/5_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/6_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/7_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/8_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/9_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/X_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/Y_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37 creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/10_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/11_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/12_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/13_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/14_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/15_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/16_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/17_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/18_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/19_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/1_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/20_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/21_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/22_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/2_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/3_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/4_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/5_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/6_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/7_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/8_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/9_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/X_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/Y_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38 creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/III_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/II_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/IV_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/I_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/MtDNA_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/V_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/X_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/10_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/11_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/12_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/13_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/14_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/15_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/16_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/17_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/18_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/19_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/1_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/20_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/21_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/22_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/23_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/24_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/25_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/26_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/27_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/28_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/29_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/2_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/30_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/31_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/32_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/33_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/34_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/35_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/36_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/37_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/38_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/3_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/4_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/5_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/6_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/7_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/8_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/9_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/X_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/10_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/11_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/12_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/13_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/14_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/15_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/16_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/17_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/18_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/19_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/1_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/2_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/3_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/4_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/5_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/6_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/7_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/8_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/9_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/X_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/Y_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10 creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/10_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/11_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/12_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/13_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/14_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/15_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/16_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/17_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/18_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/19_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/1_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/2_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/3_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/4_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/5_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/6_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/7_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/8_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/9_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/X_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/Y_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39 creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/10_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/11_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/12_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/13_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/14_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/15_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/16_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/17_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/18_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/19_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/1_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/2_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/3_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/4_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/5_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/6_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/7_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/8_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/9_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/X_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/Y_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9 creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/10_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/11_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/12_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/13_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/14_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/15_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/16_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/17_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/18_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/19_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/1_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/20_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/2_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/3_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/4_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/5_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/6_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/7_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/8_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/9_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/MT_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/X_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6 copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/Y_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6 creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/III_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/II_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/IV_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/IX_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/I_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/VIII_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/VII_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/VI_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/V_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XIII_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XII_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XIV_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XI_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XVI_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XV_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/X_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast creating build/lib/SigProfilerMatrixGenerator/references/vcf_files creating build/lib/SigProfilerMatrixGenerator/references/vcf_files/BRCA_example creating build/lib/SigProfilerMatrixGenerator/references/vcf_files/BRCA_example/SNV copying SigProfilerMatrixGenerator/references/vcf_files/BRCA_example/SNV/BRCA_example_subs_simple.txt -> build/lib/SigProfilerMatrixGenerator/references/vcf_files/BRCA_example/SNV creating build/lib/SigProfilerMatrixGenerator/references/vcf_files/GRCh37_bench creating build/lib/SigProfilerMatrixGenerator/references/vcf_files/GRCh37_bench/input copying SigProfilerMatrixGenerator/references/vcf_files/GRCh37_bench/input/GRCh37_bench.vcf -> build/lib/SigProfilerMatrixGenerator/references/vcf_files/GRCh37_bench/input creating build/lib/SigProfilerMatrixGenerator/references/vcf_files/GRCh38_bench creating build/lib/SigProfilerMatrixGenerator/references/vcf_files/GRCh38_bench/input copying SigProfilerMatrixGenerator/references/vcf_files/GRCh38_bench/input/GRCh38_bench.vcf -> build/lib/SigProfilerMatrixGenerator/references/vcf_files/GRCh38_bench/input creating build/lib/SigProfilerMatrixGenerator/references/vcf_files/mm10_bench creating build/lib/SigProfilerMatrixGenerator/references/vcf_files/mm10_bench/input copying SigProfilerMatrixGenerator/references/vcf_files/mm10_bench/input/mm10_bench.vcf -> build/lib/SigProfilerMatrixGenerator/references/vcf_files/mm10_bench/input creating build/lib/SigProfilerMatrixGenerator/references/vcf_files/mm9_bench creating build/lib/SigProfilerMatrixGenerator/references/vcf_files/mm9_bench/input copying SigProfilerMatrixGenerator/references/vcf_files/mm9_bench/input/mm9_bench.vcf -> build/lib/SigProfilerMatrixGenerator/references/vcf_files/mm9_bench/input creating build/lib/SigProfilerMatrixGenerator/scripts copying SigProfilerMatrixGenerator/scripts/CNVMatrixGenerator.py -> build/lib/SigProfilerMatrixGenerator/scripts copying SigProfilerMatrixGenerator/scripts/SVMatrixGenerator.py -> build/lib/SigProfilerMatrixGenerator/scripts copying SigProfilerMatrixGenerator/scripts/SigProfilerMatrixGenerator.py -> build/lib/SigProfilerMatrixGenerator/scripts copying SigProfilerMatrixGenerator/scripts/SigProfilerMatrixGeneratorFunc.py -> build/lib/SigProfilerMatrixGenerator/scripts copying SigProfilerMatrixGenerator/scripts/__init__.py -> build/lib/SigProfilerMatrixGenerator/scripts copying SigProfilerMatrixGenerator/scripts/convert_input_to_simple_files.py -> build/lib/SigProfilerMatrixGenerator/scripts copying SigProfilerMatrixGenerator/scripts/ref_install.py -> build/lib/SigProfilerMatrixGenerator/scripts copying SigProfilerMatrixGenerator/scripts/save_chrom_strings.py -> build/lib/SigProfilerMatrixGenerator/scripts copying SigProfilerMatrixGenerator/scripts/save_chrom_tsb_separate.py -> build/lib/SigProfilerMatrixGenerator/scripts copying SigProfilerMatrixGenerator/scripts/save_context_distribution.py -> build/lib/SigProfilerMatrixGenerator/scripts copying SigProfilerMatrixGenerator/scripts/save_tsb_192.py -> build/lib/SigProfilerMatrixGenerator/scripts creating build/lib/SigProfilerMatrixGenerator/scripts/Benchmark copying SigProfilerMatrixGenerator/scripts/Benchmark/GRCh37_bench_orig_3072.txt -> build/lib/SigProfilerMatrixGenerator/scripts/Benchmark copying SigProfilerMatrixGenerator/scripts/Benchmark/GRCh37_bench_orig_96.txt -> build/lib/SigProfilerMatrixGenerator/scripts/Benchmark copying SigProfilerMatrixGenerator/scripts/Benchmark/GRCh38_bench_orig_3072.txt -> build/lib/SigProfilerMatrixGenerator/scripts/Benchmark copying SigProfilerMatrixGenerator/scripts/Benchmark/GRCh38_bench_orig_96.txt -> build/lib/SigProfilerMatrixGenerator/scripts/Benchmark copying SigProfilerMatrixGenerator/scripts/Benchmark/__init__.py -> build/lib/SigProfilerMatrixGenerator/scripts/Benchmark copying SigProfilerMatrixGenerator/scripts/Benchmark/mm10_bench_orig_3072.txt -> build/lib/SigProfilerMatrixGenerator/scripts/Benchmark copying SigProfilerMatrixGenerator/scripts/Benchmark/mm10_bench_orig_96.txt -> build/lib/SigProfilerMatrixGenerator/scripts/Benchmark copying SigProfilerMatrixGenerator/scripts/Benchmark/mm9_bench_orig_3072.txt -> build/lib/SigProfilerMatrixGenerator/scripts/Benchmark copying SigProfilerMatrixGenerator/scripts/Benchmark/mm9_bench_orig_96.txt -> build/lib/SigProfilerMatrixGenerator/scripts/Benchmark installing to build/bdist.linux-x86_64/wheel running install running install_lib creating build/bdist.linux-x86_64 creating build/bdist.linux-x86_64/wheel creating build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator creating build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/scripts creating build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/scripts/Benchmark copying build/lib/SigProfilerMatrixGenerator/scripts/Benchmark/mm9_bench_orig_96.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/scripts/Benchmark copying build/lib/SigProfilerMatrixGenerator/scripts/Benchmark/mm9_bench_orig_3072.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/scripts/Benchmark copying build/lib/SigProfilerMatrixGenerator/scripts/Benchmark/mm10_bench_orig_96.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/scripts/Benchmark copying build/lib/SigProfilerMatrixGenerator/scripts/Benchmark/mm10_bench_orig_3072.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/scripts/Benchmark copying build/lib/SigProfilerMatrixGenerator/scripts/Benchmark/__init__.py -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/scripts/Benchmark copying build/lib/SigProfilerMatrixGenerator/scripts/Benchmark/GRCh38_bench_orig_96.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/scripts/Benchmark copying build/lib/SigProfilerMatrixGenerator/scripts/Benchmark/GRCh38_bench_orig_3072.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/scripts/Benchmark copying build/lib/SigProfilerMatrixGenerator/scripts/Benchmark/GRCh37_bench_orig_96.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/scripts/Benchmark copying build/lib/SigProfilerMatrixGenerator/scripts/Benchmark/GRCh37_bench_orig_3072.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/scripts/Benchmark copying build/lib/SigProfilerMatrixGenerator/scripts/save_tsb_192.py -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/scripts copying build/lib/SigProfilerMatrixGenerator/scripts/save_context_distribution.py -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/scripts copying build/lib/SigProfilerMatrixGenerator/scripts/save_chrom_tsb_separate.py -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/scripts copying build/lib/SigProfilerMatrixGenerator/scripts/save_chrom_strings.py -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/scripts copying build/lib/SigProfilerMatrixGenerator/scripts/ref_install.py -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/scripts copying build/lib/SigProfilerMatrixGenerator/scripts/convert_input_to_simple_files.py -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/scripts copying build/lib/SigProfilerMatrixGenerator/scripts/__init__.py -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/scripts copying build/lib/SigProfilerMatrixGenerator/scripts/SigProfilerMatrixGeneratorFunc.py -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/scripts copying build/lib/SigProfilerMatrixGenerator/scripts/SigProfilerMatrixGenerator.py -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/scripts copying build/lib/SigProfilerMatrixGenerator/scripts/SVMatrixGenerator.py -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/scripts copying build/lib/SigProfilerMatrixGenerator/scripts/CNVMatrixGenerator.py -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/scripts creating build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references creating build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/vcf_files creating build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/vcf_files/mm9_bench creating build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/vcf_files/mm9_bench/input copying build/lib/SigProfilerMatrixGenerator/references/vcf_files/mm9_bench/input/mm9_bench.vcf -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/vcf_files/mm9_bench/input creating build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/vcf_files/mm10_bench creating build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/vcf_files/mm10_bench/input copying build/lib/SigProfilerMatrixGenerator/references/vcf_files/mm10_bench/input/mm10_bench.vcf -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/vcf_files/mm10_bench/input creating build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/vcf_files/GRCh38_bench creating build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/vcf_files/GRCh38_bench/input copying build/lib/SigProfilerMatrixGenerator/references/vcf_files/GRCh38_bench/input/GRCh38_bench.vcf -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/vcf_files/GRCh38_bench/input creating build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/vcf_files/GRCh37_bench creating build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/vcf_files/GRCh37_bench/input copying build/lib/SigProfilerMatrixGenerator/references/vcf_files/GRCh37_bench/input/GRCh37_bench.vcf -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/vcf_files/GRCh37_bench/input creating build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/vcf_files/BRCA_example creating build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/vcf_files/BRCA_example/SNV copying build/lib/SigProfilerMatrixGenerator/references/vcf_files/BRCA_example/SNV/BRCA_example_subs_simple.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/vcf_files/BRCA_example/SNV creating build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes creating build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED creating build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/X_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XV_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XVI_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XI_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XIV_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XII_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XIII_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/V_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/VI_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/VII_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/VIII_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/I_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/IX_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/IV_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/II_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/III_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast creating build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/Y_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/X_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/MT_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/9_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/8_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/7_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/6_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/5_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/4_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/3_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/2_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/20_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/1_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/19_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/18_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/17_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/16_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/15_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/14_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/13_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/12_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/11_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/10_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6 creating build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/Y_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/X_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/9_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/8_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/7_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/6_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/5_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/4_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/3_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/2_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/1_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/19_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/18_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/17_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/16_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/15_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/14_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/13_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/12_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/11_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/10_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9 creating build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/Y_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/X_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/9_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/8_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/7_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/6_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/5_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/4_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/3_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/2_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/1_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/19_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/18_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/17_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/16_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/15_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/14_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/13_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/12_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/11_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/10_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39 creating build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/Y_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/X_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/9_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/8_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/7_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/6_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/5_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/4_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/3_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/2_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/1_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/19_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/18_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/17_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/16_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/15_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/14_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/13_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/12_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/11_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/10_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10 creating build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/X_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/9_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/8_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/7_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/6_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/5_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/4_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/3_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/38_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/37_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/36_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/35_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/34_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/33_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/32_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/31_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/30_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/2_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/29_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/28_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/27_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/26_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/25_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/24_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/23_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/22_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/21_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/20_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/1_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/19_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/18_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/17_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/16_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/15_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/14_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/13_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/12_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/11_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/10_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog creating build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/X_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/V_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/MtDNA_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/I_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/IV_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/II_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/III_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans creating build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/Y_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/X_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/9_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/8_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/7_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/6_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/5_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/4_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/3_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/2_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/22_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/21_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/20_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/1_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/19_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/18_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/17_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/16_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/15_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/14_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/13_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/12_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/11_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/10_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38 creating build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/Y_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/X_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/9_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/8_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/7_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/6_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/5_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/4_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/3_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/2_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/22_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/21_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/20_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/1_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/19_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/18_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/17_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/16_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/15_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/14_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/13_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/12_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/11_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/10_BED_TSB.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/__init__.py -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED creating build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts creating build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/X_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XV_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XVI_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XI_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XIV_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XII_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XIII_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/V_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/VI_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/VII_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/VIII_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/M_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/I_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/IX_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/IV_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/II_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/III_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast creating build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/Y_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/X_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/MT_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/9_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/8_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/7_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/6_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/5_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/4_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/3_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/2_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/20_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/1_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/19_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/18_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/17_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/16_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/15_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/14_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/13_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/12_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/11_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/10_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6 creating build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/Y_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/X_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/MT_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/9_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/8_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/7_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/6_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/5_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/4_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/3_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/2_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/1_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/19_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/18_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/17_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/16_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/15_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/14_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/13_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/12_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/11_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/10_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9 creating build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/Y_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/X_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/9_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/8_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/7_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/6_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/5_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/4_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/3_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/2_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/1_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/19_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/18_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/17_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/16_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/15_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/14_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/13_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/12_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/11_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/10_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39 creating build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/Y_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/X_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/MT_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/9_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/8_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/7_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/6_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/5_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/4_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/3_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/2_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/1_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/19_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/18_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/17_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/16_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/15_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/14_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/13_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/12_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/11_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/10_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10 creating build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/ebv copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/ebv/gi_82503188_ref_NC_007605_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/ebv creating build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/X_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/9_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/8_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/7_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/6_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/5_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/4_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/3_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/38_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/37_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/36_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/35_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/34_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/33_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/32_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/31_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/30_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/2_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/29_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/28_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/27_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/26_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/25_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/24_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/23_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/22_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/21_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/20_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/1_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/19_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/18_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/17_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/16_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/15_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/14_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/13_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/12_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/11_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/10_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog creating build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/X_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/V_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/MtDNA_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/I_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/IV_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/II_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/III_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans creating build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/Y_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/X_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/MT_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/9_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/8_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/7_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/6_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/5_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/4_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/3_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/2_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/22_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/21_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/20_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/1_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/19_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/18_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/17_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/16_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/15_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/14_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/13_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/12_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/11_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/10_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38 creating build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/Y_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/X_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/MT_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/9_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/8_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/7_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/6_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/5_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/4_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/3_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/2_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/22_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/21_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/20_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/1_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/19_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/18_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/17_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/16_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/15_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/14_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/13_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/12_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/11_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/10_transcripts.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/__init__.py -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts creating build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome creating build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/yeast copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/yeast/yeast_exome.interval_list -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/yeast creating build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/rn6 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/rn6/rn6_exome.interval_list -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/rn6 creating build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/mm9 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/mm9/mm9_exome.interval_list -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/mm9 creating build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/mm39 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/mm39/mm39_exome.interval_list -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/mm39 creating build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/mm10 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/mm10/mm10_exome.interval_list -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/mm10 creating build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/ebv copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/ebv/tcga_cyclic_regions(AutoRecovered).csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/ebv copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/ebv/multipleVariableTesting_mar12_2020.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/ebv copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/ebv/ebv_exome.interval_list -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/ebv creating build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/dog copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/dog/dog_exome.interval_list -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/dog creating build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/c_elegans copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/c_elegans/c_elegans_exome.interval_list -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/c_elegans creating build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh38 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh38/GRCh38_exome.interval_list -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh38 creating build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh37 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh37/GRCh37_exome.interval_list -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh37 copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/__init__.py -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome creating build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_DBS_female.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_DBS186_female.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_96_female.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_6_female.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_6144_female.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_384_female.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_24_female.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_192_female.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_1536_female.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_signatures_96.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_male_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_male.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_female_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_female.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_male_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_male.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_female_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_female.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_male_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_male.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_female_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_female.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_male_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_male.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_female_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_female.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_male_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_male.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_female_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_female.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_male_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_male.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_female_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_female.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_male_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_male.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_female_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_female.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_male_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_male.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_female_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_female.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_male_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_male.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_female_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_female.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_male_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_male.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_female_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_female.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_male_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_male.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_female_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_female.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_male_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_male.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_female_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_female.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_male_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_male.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_female_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_female.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_male_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_male.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_female_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_female.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_male_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_male.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_female_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_female.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_male_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_male.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_female_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_female.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_male_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_male.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_female_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_female.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6_male_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6_female_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6_female.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_male_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_male.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_female_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_female.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_male_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_male.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_female_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_female.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_male_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_male.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_female_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_female.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_male_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_male.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_female_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_female.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_male.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_female_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_female.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_exome_old.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_male_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_male.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_female_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_female.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_male_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_male.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_female_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_female.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_male_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_male.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_female_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_female.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_male_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_male.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_female_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_female.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_male_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_male.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_female_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_female.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_male_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_male.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_female_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_female.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_male_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_male.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_female_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_female.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_male_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_male.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_female_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_female.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_male_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_male.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_female_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_female_BED.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_female.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_male_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_male.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_female_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_female.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_male_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_male.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_female_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_female.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_male_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_male.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_female_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_female.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_male_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_male.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_female_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_female.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_male_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_male.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_female_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_female.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_male_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_male.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_female_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_female.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_DBS186.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_DBS.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_96.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_6144.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_6.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_384.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_24.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_192.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_1536.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_96_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_96.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6144_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6144.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_384_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_384.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_24_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_24.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_1536_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_1536.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS186_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS186.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_96_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_96.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6144_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6144.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_384_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_384.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_24_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_24.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_1536_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_1536.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS186_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS186.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_96_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_96.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6144_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6144.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_384_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_384.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_24_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_24.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_1536_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_1536.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS186_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS186.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_96_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_96.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6144_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6144.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_384_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_384.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_24_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_24.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_1536_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_1536.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS186_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS186.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_96_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_96.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6144_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6144.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_384_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_384.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_24_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_24.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_1536_exome.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_1536.csv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions creating build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV creating build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_output copying build/lib/SigProfilerMatrixGenerator/references/SV/example_output/560-Breast_RS32_counts_aggregated.pdf -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_output copying build/lib/SigProfilerMatrixGenerator/references/SV/example_output/560-Breast.SV32.matrix.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_output copying build/lib/SigProfilerMatrixGenerator/references/SV/example_output/560-Breast.SV32.annotated.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_output creating build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input creating build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA570896.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA570843.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA569081.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542879.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542830.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542577.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542181.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542155.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA541894.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA541765.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA539008.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA538992.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA538871.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA533704.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA530642.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA530594.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA530512.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA530440.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529837.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529774.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529747.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529739.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528947.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528876.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528848.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528809.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA520203.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA517376.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA517281.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA515347.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA515261.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA507250.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505918.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505768.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505529.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505478.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501607.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501599.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501576.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501469.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501385.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA499746.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA499742.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA413928.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA413758.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA413642.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA410978.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA321048.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA270468.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA130927.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG creating build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9756a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9755a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9593a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9589a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9572a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9568a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9541a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9064a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9002a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD8982a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD8969a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD8832a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7305a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7238a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7205a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7199a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD6414a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD6048a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4957a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4875a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4606a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4255a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4199a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4103a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4069a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24314a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24303a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24225a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24217a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD23566a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD22364a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD18031a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD17973a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD14472a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD14456a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13306a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13298a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13297a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13167a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13162a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11748a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11743a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11742a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11389a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11384a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11379a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11361a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11352a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11348a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11346a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast creating build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/CNV creating build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/CNV/example_output copying build/lib/SigProfilerMatrixGenerator/references/CNV/example_output/BATTENBERG-TEST.CNV48.matrix.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/CNV/example_output creating build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/CNV/example_input copying build/lib/SigProfilerMatrixGenerator/references/CNV/example_input/all.breast.ascat.summary.sample.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/CNV/example_input copying build/lib/SigProfilerMatrixGenerator/references/CNV/example_input/Battenberg_test.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/CNV/example_input copying build/lib/SigProfilerMatrixGenerator/references/CNV/CN_classes_dictionary.txt -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/CNV copying build/lib/SigProfilerMatrixGenerator/references/CNV/CNV_features.tsv -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/references/CNV creating build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/controllers copying build/lib/SigProfilerMatrixGenerator/controllers/cli_controller.py -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/controllers copying build/lib/SigProfilerMatrixGenerator/controllers/__init__.py -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator/controllers copying build/lib/SigProfilerMatrixGenerator/__init__.py -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator copying build/lib/SigProfilerMatrixGenerator/install.py -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator copying build/lib/SigProfilerMatrixGenerator/test_helpers.py -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator copying build/lib/SigProfilerMatrixGenerator/version.py -> build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator running install_egg_info Copying SigProfilerMatrixGenerator.egg-info to build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator-1.2.17-py3.11.egg-info running install_scripts creating build/bdist.linux-x86_64/wheel/SigProfilerMatrixGenerator-1.2.17.dist-info/WHEEL creating '/builddir/build/BUILD/SigProfilerMatrixGenerator-1.2.17/.pyproject-builddir/pip-wheel-rwy8iz19/.tmp-1y8xgdc0/SigProfilerMatrixGenerator-1.2.17-py3-none-any.whl' and adding 'build/bdist.linux-x86_64/wheel' to it adding 'SigProfilerMatrixGenerator/__init__.py' adding 'SigProfilerMatrixGenerator/install.py' adding 'SigProfilerMatrixGenerator/test_helpers.py' adding 'SigProfilerMatrixGenerator/version.py' adding 'SigProfilerMatrixGenerator/controllers/__init__.py' adding 'SigProfilerMatrixGenerator/controllers/cli_controller.py' adding 'SigProfilerMatrixGenerator/references/CNV/CNV_features.tsv' adding 'SigProfilerMatrixGenerator/references/CNV/CN_classes_dictionary.txt' adding 'SigProfilerMatrixGenerator/references/CNV/example_input/Battenberg_test.tsv' adding 'SigProfilerMatrixGenerator/references/CNV/example_input/all.breast.ascat.summary.sample.tsv' adding 'SigProfilerMatrixGenerator/references/CNV/example_output/BATTENBERG-TEST.CNV48.matrix.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11346a.560_breast.rearrangements.n560.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11348a.560_breast.rearrangements.n560.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11352a.560_breast.rearrangements.n560.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11361a.560_breast.rearrangements.n560.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11379a.560_breast.rearrangements.n560.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11384a.560_breast.rearrangements.n560.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11389a.560_breast.rearrangements.n560.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11742a.560_breast.rearrangements.n560.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11743a.560_breast.rearrangements.n560.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11748a.560_breast.rearrangements.n560.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13162a.560_breast.rearrangements.n560.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13167a.560_breast.rearrangements.n560.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13297a.560_breast.rearrangements.n560.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13298a.560_breast.rearrangements.n560.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13306a.560_breast.rearrangements.n560.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD14456a.560_breast.rearrangements.n560.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD14472a.560_breast.rearrangements.n560.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD17973a.560_breast.rearrangements.n560.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD18031a.560_breast.rearrangements.n560.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD22364a.560_breast.rearrangements.n560.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD23566a.560_breast.rearrangements.n560.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24217a.560_breast.rearrangements.n560.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24225a.560_breast.rearrangements.n560.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24303a.560_breast.rearrangements.n560.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24314a.560_breast.rearrangements.n560.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4069a.560_breast.rearrangements.n560.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4103a.560_breast.rearrangements.n560.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4199a.560_breast.rearrangements.n560.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4255a.560_breast.rearrangements.n560.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4606a.560_breast.rearrangements.n560.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4875a.560_breast.rearrangements.n560.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4957a.560_breast.rearrangements.n560.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD6048a.560_breast.rearrangements.n560.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD6414a.560_breast.rearrangements.n560.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7199a.560_breast.rearrangements.n560.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7205a.560_breast.rearrangements.n560.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7238a.560_breast.rearrangements.n560.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7305a.560_breast.rearrangements.n560.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD8832a.560_breast.rearrangements.n560.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD8969a.560_breast.rearrangements.n560.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD8982a.560_breast.rearrangements.n560.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9002a.560_breast.rearrangements.n560.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9064a.560_breast.rearrangements.n560.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9541a.560_breast.rearrangements.n560.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9568a.560_breast.rearrangements.n560.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9572a.560_breast.rearrangements.n560.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9589a.560_breast.rearrangements.n560.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9593a.560_breast.rearrangements.n560.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9755a.560_breast.rearrangements.n560.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9756a.560_breast.rearrangements.n560.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA130927.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA270468.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA321048.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA410978.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA413642.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA413758.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA413928.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA499742.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA499746.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501385.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501469.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501576.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501599.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501607.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505478.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505529.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505768.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505918.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA507250.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA515261.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA515347.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA517281.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA517376.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA520203.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528809.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528848.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528876.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528947.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529739.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529747.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529774.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529837.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA530440.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA530512.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA530594.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA530642.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA533704.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA538871.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA538992.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA539008.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA541765.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA541894.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542155.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542181.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542577.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542830.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542879.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA569081.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA570843.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA570896.bedpe.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_output/560-Breast.SV32.annotated.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_output/560-Breast.SV32.matrix.tsv' adding 'SigProfilerMatrixGenerator/references/SV/example_output/560-Breast_RS32_counts_aggregated.pdf' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_1536.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_1536_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_24.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_24_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_384.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_384_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6144.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6144_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_96.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_96_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS186.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS186_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_1536.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_1536_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_24.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_24_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_384.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_384_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6144.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6144_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_96.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_96_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS186.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS186_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_1536.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_1536_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_24.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_24_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_384.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_384_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6144.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6144_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_96.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_96_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS186.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS186_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_1536.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_1536_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_24.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_24_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_384.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_384_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6144.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6144_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_96.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_96_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS186.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS186_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_1536.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_1536_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_24.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_24_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_384.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_384_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6144.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6144_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_96.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_96_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_1536.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_192.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_24.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_384.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_6.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_6144.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_96.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_DBS.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_DBS186.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_female.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_female_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_male.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_male_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_female.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_female_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_male.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_male_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_female.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_female_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_male.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_male_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_female.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_female_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_male.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_male_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_female.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_female_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_male.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_male_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_female.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_female_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_male.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_male_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_female.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_female_BED.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_female_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_male.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_male_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_female.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_female_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_male.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_male_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_female.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_female_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_male.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_male_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_female.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_female_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_male.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_male_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_female.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_female_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_male.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_male_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_female.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_female_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_male.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_male_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_female.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_female_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_male.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_male_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_female.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_female_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_male.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_male_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_female.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_female_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_male.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_male_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_exome_old.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_female.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_female_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_male.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_female.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_female_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_male.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_male_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_female.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_female_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_male.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_male_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_female.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_female_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_male.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_male_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_female.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_female_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_male.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_male_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6_female.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6_female_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6_male_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_female.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_female_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_male.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_male_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_female.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_female_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_male.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_male_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_female.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_female_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_male.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_male_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_female.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_female_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_male.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_male_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_female.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_female_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_male.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_male_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_female.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_female_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_male.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_male_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_female.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_female_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_male.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_male_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_female.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_female_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_male.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_male_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_female.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_female_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_male.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_male_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_female.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_female_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_male.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_male_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_female.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_female_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_male.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_male_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_female.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_female_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_male.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_male_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_female.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_female_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_male.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_male_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_female.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_female_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_male.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_male_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_female.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_female_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_male.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_male_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_female.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_female_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_male.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_male_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_female.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_female_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_male.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_male_exome.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_signatures_96.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_1536_female.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_192_female.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_24_female.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_384_female.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_6144_female.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_6_female.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_96_female.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_DBS186_female.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_DBS_female.csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/__init__.py' adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh37/GRCh37_exome.interval_list' adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh38/GRCh38_exome.interval_list' adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/c_elegans/c_elegans_exome.interval_list' adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/dog/dog_exome.interval_list' adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/ebv/ebv_exome.interval_list' adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/ebv/multipleVariableTesting_mar12_2020.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/ebv/tcga_cyclic_regions(AutoRecovered).csv' adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/mm10/mm10_exome.interval_list' adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/mm39/mm39_exome.interval_list' adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/mm9/mm9_exome.interval_list' adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/rn6/rn6_exome.interval_list' adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/yeast/yeast_exome.interval_list' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/__init__.py' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/10_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/11_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/12_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/13_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/14_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/15_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/16_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/17_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/18_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/19_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/1_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/20_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/21_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/22_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/2_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/3_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/4_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/5_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/6_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/7_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/8_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/9_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/MT_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/X_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/Y_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/10_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/11_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/12_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/13_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/14_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/15_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/16_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/17_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/18_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/19_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/1_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/20_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/21_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/22_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/2_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/3_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/4_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/5_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/6_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/7_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/8_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/9_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/MT_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/X_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/Y_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/III_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/II_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/IV_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/I_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/MtDNA_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/V_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/X_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/10_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/11_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/12_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/13_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/14_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/15_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/16_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/17_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/18_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/19_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/1_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/20_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/21_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/22_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/23_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/24_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/25_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/26_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/27_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/28_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/29_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/2_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/30_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/31_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/32_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/33_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/34_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/35_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/36_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/37_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/38_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/3_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/4_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/5_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/6_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/7_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/8_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/9_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/X_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/ebv/gi_82503188_ref_NC_007605_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/10_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/11_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/12_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/13_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/14_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/15_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/16_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/17_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/18_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/19_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/1_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/2_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/3_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/4_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/5_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/6_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/7_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/8_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/9_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/MT_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/X_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/Y_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/10_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/11_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/12_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/13_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/14_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/15_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/16_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/17_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/18_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/19_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/1_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/2_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/3_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/4_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/5_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/6_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/7_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/8_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/9_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/X_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/Y_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/10_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/11_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/12_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/13_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/14_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/15_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/16_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/17_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/18_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/19_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/1_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/2_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/3_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/4_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/5_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/6_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/7_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/8_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/9_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/MT_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/X_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/Y_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/10_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/11_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/12_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/13_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/14_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/15_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/16_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/17_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/18_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/19_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/1_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/20_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/2_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/3_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/4_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/5_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/6_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/7_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/8_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/9_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/MT_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/X_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/Y_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/III_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/II_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/IV_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/IX_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/I_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/M_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/VIII_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/VII_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/VI_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/V_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XIII_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XII_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XIV_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XI_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XVI_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XV_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/X_transcripts.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/__init__.py' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/10_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/11_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/12_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/13_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/14_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/15_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/16_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/17_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/18_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/19_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/1_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/20_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/21_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/22_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/2_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/3_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/4_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/5_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/6_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/7_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/8_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/9_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/X_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/Y_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/10_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/11_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/12_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/13_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/14_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/15_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/16_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/17_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/18_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/19_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/1_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/20_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/21_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/22_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/2_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/3_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/4_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/5_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/6_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/7_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/8_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/9_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/X_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/Y_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/III_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/II_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/IV_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/I_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/MtDNA_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/V_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/X_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/10_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/11_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/12_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/13_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/14_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/15_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/16_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/17_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/18_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/19_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/1_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/20_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/21_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/22_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/23_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/24_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/25_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/26_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/27_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/28_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/29_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/2_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/30_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/31_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/32_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/33_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/34_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/35_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/36_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/37_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/38_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/3_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/4_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/5_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/6_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/7_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/8_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/9_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/X_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/10_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/11_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/12_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/13_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/14_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/15_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/16_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/17_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/18_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/19_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/1_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/2_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/3_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/4_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/5_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/6_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/7_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/8_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/9_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/X_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/Y_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/10_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/11_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/12_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/13_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/14_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/15_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/16_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/17_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/18_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/19_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/1_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/2_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/3_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/4_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/5_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/6_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/7_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/8_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/9_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/X_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/Y_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/10_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/11_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/12_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/13_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/14_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/15_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/16_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/17_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/18_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/19_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/1_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/2_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/3_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/4_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/5_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/6_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/7_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/8_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/9_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/X_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/Y_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/10_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/11_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/12_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/13_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/14_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/15_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/16_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/17_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/18_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/19_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/1_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/20_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/2_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/3_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/4_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/5_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/6_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/7_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/8_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/9_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/MT_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/X_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/Y_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/III_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/II_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/IV_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/IX_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/I_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/VIII_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/VII_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/VI_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/V_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XIII_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XII_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XIV_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XI_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XVI_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XV_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/X_BED_TSB.txt' adding 'SigProfilerMatrixGenerator/references/vcf_files/BRCA_example/SNV/BRCA_example_subs_simple.txt' adding 'SigProfilerMatrixGenerator/references/vcf_files/GRCh37_bench/input/GRCh37_bench.vcf' adding 'SigProfilerMatrixGenerator/references/vcf_files/GRCh38_bench/input/GRCh38_bench.vcf' adding 'SigProfilerMatrixGenerator/references/vcf_files/mm10_bench/input/mm10_bench.vcf' adding 'SigProfilerMatrixGenerator/references/vcf_files/mm9_bench/input/mm9_bench.vcf' adding 'SigProfilerMatrixGenerator/scripts/CNVMatrixGenerator.py' adding 'SigProfilerMatrixGenerator/scripts/SVMatrixGenerator.py' adding 'SigProfilerMatrixGenerator/scripts/SigProfilerMatrixGenerator.py' adding 'SigProfilerMatrixGenerator/scripts/SigProfilerMatrixGeneratorFunc.py' adding 'SigProfilerMatrixGenerator/scripts/__init__.py' adding 'SigProfilerMatrixGenerator/scripts/convert_input_to_simple_files.py' adding 'SigProfilerMatrixGenerator/scripts/ref_install.py' adding 'SigProfilerMatrixGenerator/scripts/save_chrom_strings.py' adding 'SigProfilerMatrixGenerator/scripts/save_chrom_tsb_separate.py' adding 'SigProfilerMatrixGenerator/scripts/save_context_distribution.py' adding 'SigProfilerMatrixGenerator/scripts/save_tsb_192.py' adding 'SigProfilerMatrixGenerator/scripts/Benchmark/GRCh37_bench_orig_3072.txt' adding 'SigProfilerMatrixGenerator/scripts/Benchmark/GRCh37_bench_orig_96.txt' adding 'SigProfilerMatrixGenerator/scripts/Benchmark/GRCh38_bench_orig_3072.txt' adding 'SigProfilerMatrixGenerator/scripts/Benchmark/GRCh38_bench_orig_96.txt' adding 'SigProfilerMatrixGenerator/scripts/Benchmark/__init__.py' adding 'SigProfilerMatrixGenerator/scripts/Benchmark/mm10_bench_orig_3072.txt' adding 'SigProfilerMatrixGenerator/scripts/Benchmark/mm10_bench_orig_96.txt' adding 'SigProfilerMatrixGenerator/scripts/Benchmark/mm9_bench_orig_3072.txt' adding 'SigProfilerMatrixGenerator/scripts/Benchmark/mm9_bench_orig_96.txt' adding 'SigProfilerMatrixGenerator-1.2.17.dist-info/LICENSE' adding 'SigProfilerMatrixGenerator-1.2.17.dist-info/METADATA' adding 'SigProfilerMatrixGenerator-1.2.17.dist-info/WHEEL' adding 'SigProfilerMatrixGenerator-1.2.17.dist-info/top_level.txt' adding 'SigProfilerMatrixGenerator-1.2.17.dist-info/RECORD' removing build/bdist.linux-x86_64/wheel Building wheel for SigProfilerMatrixGenerator (pyproject.toml): finished with status 'done' Created wheel for SigProfilerMatrixGenerator: filename=SigProfilerMatrixGenerator-1.2.17-py3-none-any.whl size=40152110 sha256=64b0c6df8722c3dd8856d9911e6095da97c1cbcd2f5c74b0bb8844ce83a5e65f Stored in directory: /builddir/.cache/pip/wheels/24/00/7d/f0cd1dd304b125e8cf92ee07181c82a510f161c4558babe1f0 Successfully built SigProfilerMatrixGenerator + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.S30kcZ + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/python-sigprofilermatrixgenerator-1.2.17-1.fc39.x86_64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/python-sigprofilermatrixgenerator-1.2.17-1.fc39.x86_64 ++ dirname /builddir/build/BUILDROOT/python-sigprofilermatrixgenerator-1.2.17-1.fc39.x86_64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/python-sigprofilermatrixgenerator-1.2.17-1.fc39.x86_64 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd SigProfilerMatrixGenerator-1.2.17 ++ ls /builddir/build/BUILD/SigProfilerMatrixGenerator-1.2.17/pyproject-wheeldir/SigProfilerMatrixGenerator-1.2.17-py3-none-any.whl ++ xargs basename --multiple ++ sed -E 's/([^-]+)-([^-]+)-.+\.whl/\1==\2/' + specifier=SigProfilerMatrixGenerator==1.2.17 + TMPDIR=/builddir/build/BUILD/SigProfilerMatrixGenerator-1.2.17/.pyproject-builddir + /usr/bin/python3 -m pip install --root /builddir/build/BUILDROOT/python-sigprofilermatrixgenerator-1.2.17-1.fc39.x86_64 --prefix /usr --no-deps --disable-pip-version-check --progress-bar off --verbose --ignore-installed --no-warn-script-location --no-index --no-cache-dir --find-links /builddir/build/BUILD/SigProfilerMatrixGenerator-1.2.17/pyproject-wheeldir SigProfilerMatrixGenerator==1.2.17 Using pip 23.1.2 from /usr/lib/python3.11/site-packages/pip (python 3.11) Looking in links: /builddir/build/BUILD/SigProfilerMatrixGenerator-1.2.17/pyproject-wheeldir Processing ./pyproject-wheeldir/SigProfilerMatrixGenerator-1.2.17-py3-none-any.whl Installing collected packages: SigProfilerMatrixGenerator Successfully installed SigProfilerMatrixGenerator-1.2.17 + '[' -d /builddir/build/BUILDROOT/python-sigprofilermatrixgenerator-1.2.17-1.fc39.x86_64/usr/bin ']' + rm -f /builddir/build/BUILD/python-sigprofilermatrixgenerator-1.2.17-1.fc39.x86_64-pyproject-ghost-distinfo + site_dirs=() + '[' -d /builddir/build/BUILDROOT/python-sigprofilermatrixgenerator-1.2.17-1.fc39.x86_64/usr/lib/python3.11/site-packages ']' + site_dirs+=("/usr/lib/python3.11/site-packages") + '[' /builddir/build/BUILDROOT/python-sigprofilermatrixgenerator-1.2.17-1.fc39.x86_64/usr/lib64/python3.11/site-packages '!=' /builddir/build/BUILDROOT/python-sigprofilermatrixgenerator-1.2.17-1.fc39.x86_64/usr/lib/python3.11/site-packages ']' + '[' -d /builddir/build/BUILDROOT/python-sigprofilermatrixgenerator-1.2.17-1.fc39.x86_64/usr/lib64/python3.11/site-packages ']' + for site_dir in ${site_dirs[@]} + for distinfo in /builddir/build/BUILDROOT/python-sigprofilermatrixgenerator-1.2.17-1.fc39.x86_64$site_dir/*.dist-info + echo '%ghost /usr/lib/python3.11/site-packages/SigProfilerMatrixGenerator-1.2.17.dist-info' + sed -i s/pip/rpm/ /builddir/build/BUILDROOT/python-sigprofilermatrixgenerator-1.2.17-1.fc39.x86_64/usr/lib/python3.11/site-packages/SigProfilerMatrixGenerator-1.2.17.dist-info/INSTALLER + PYTHONPATH=/usr/lib/rpm/redhat + /usr/bin/python3 -B /usr/lib/rpm/redhat/pyproject_preprocess_record.py --buildroot /builddir/build/BUILDROOT/python-sigprofilermatrixgenerator-1.2.17-1.fc39.x86_64 --record /builddir/build/BUILDROOT/python-sigprofilermatrixgenerator-1.2.17-1.fc39.x86_64/usr/lib/python3.11/site-packages/SigProfilerMatrixGenerator-1.2.17.dist-info/RECORD --output /builddir/build/BUILD/python-sigprofilermatrixgenerator-1.2.17-1.fc39.x86_64-pyproject-record + rm -fv /builddir/build/BUILDROOT/python-sigprofilermatrixgenerator-1.2.17-1.fc39.x86_64/usr/lib/python3.11/site-packages/SigProfilerMatrixGenerator-1.2.17.dist-info/RECORD removed '/builddir/build/BUILDROOT/python-sigprofilermatrixgenerator-1.2.17-1.fc39.x86_64/usr/lib/python3.11/site-packages/SigProfilerMatrixGenerator-1.2.17.dist-info/RECORD' + rm -fv /builddir/build/BUILDROOT/python-sigprofilermatrixgenerator-1.2.17-1.fc39.x86_64/usr/lib/python3.11/site-packages/SigProfilerMatrixGenerator-1.2.17.dist-info/REQUESTED removed '/builddir/build/BUILDROOT/python-sigprofilermatrixgenerator-1.2.17-1.fc39.x86_64/usr/lib/python3.11/site-packages/SigProfilerMatrixGenerator-1.2.17.dist-info/REQUESTED' ++ cut -f1 '-d ' ++ wc -l /builddir/build/BUILD/python-sigprofilermatrixgenerator-1.2.17-1.fc39.x86_64-pyproject-ghost-distinfo + lines=1 + '[' 1 -ne 1 ']' + RPM_PERCENTAGES_COUNT=2 + /usr/bin/python3 /usr/lib/rpm/redhat/pyproject_save_files.py --output-files /builddir/build/BUILD/python-sigprofilermatrixgenerator-1.2.17-1.fc39.x86_64-pyproject-files --output-modules /builddir/build/BUILD/python-sigprofilermatrixgenerator-1.2.17-1.fc39.x86_64-pyproject-modules --buildroot /builddir/build/BUILDROOT/python-sigprofilermatrixgenerator-1.2.17-1.fc39.x86_64 --sitelib /usr/lib/python3.11/site-packages --sitearch /usr/lib64/python3.11/site-packages --python-version 3.11 --pyproject-record /builddir/build/BUILD/python-sigprofilermatrixgenerator-1.2.17-1.fc39.x86_64-pyproject-record --prefix /usr '*' +auto + /usr/bin/find-debuginfo -j2 --strict-build-id -m -i --build-id-seed 1.2.17-1.fc39 --unique-debug-suffix -1.2.17-1.fc39.x86_64 --unique-debug-src-base python-sigprofilermatrixgenerator-1.2.17-1.fc39.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/SigProfilerMatrixGenerator-1.2.17 find: 'debug': No such file or directory + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs *** WARNING: ./usr/lib/python3.11/site-packages/SigProfilerMatrixGenerator-1.2.17.dist-info/LICENSE is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib/python3.11/site-packages/SigProfilerMatrixGenerator/references/chromosomes/exome/yeast/yeast_exome.interval_list is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib/python3.11/site-packages/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_male_exome.csv is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib/python3.11/site-packages/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_male_exome.csv is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib/python3.11/site-packages/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_male_exome.csv is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib/python3.11/site-packages/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_male_exome.csv is executable but has no shebang, removing executable bit + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j2 Bytecompiling .py files below /builddir/build/BUILDROOT/python-sigprofilermatrixgenerator-1.2.17-1.fc39.x86_64/usr/lib/python3.11 using python3.11 + /usr/lib/rpm/redhat/brp-python-hardlink Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.dzwCVR + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd SigProfilerMatrixGenerator-1.2.17 + '[' '!' -f /builddir/build/BUILD/python-sigprofilermatrixgenerator-1.2.17-1.fc39.x86_64-pyproject-modules ']' + PATH=/builddir/build/BUILDROOT/python-sigprofilermatrixgenerator-1.2.17-1.fc39.x86_64/usr/bin:/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin + PYTHONPATH=/builddir/build/BUILDROOT/python-sigprofilermatrixgenerator-1.2.17-1.fc39.x86_64/usr/lib64/python3.11/site-packages:/builddir/build/BUILDROOT/python-sigprofilermatrixgenerator-1.2.17-1.fc39.x86_64/usr/lib/python3.11/site-packages + _PYTHONSITE=/builddir/build/BUILDROOT/python-sigprofilermatrixgenerator-1.2.17-1.fc39.x86_64/usr/lib64/python3.11/site-packages:/builddir/build/BUILDROOT/python-sigprofilermatrixgenerator-1.2.17-1.fc39.x86_64/usr/lib/python3.11/site-packages + PYTHONDONTWRITEBYTECODE=1 + /usr/bin/python3 -sP /usr/lib/rpm/redhat/import_all_modules.py -f /builddir/build/BUILD/python-sigprofilermatrixgenerator-1.2.17-1.fc39.x86_64-pyproject-modules -t Check import: SigProfilerMatrixGenerator + RPM_EC=0 ++ jobs -p + exit 0 Processing files: python3-sigprofilermatrixgenerator-1.2.17-1.fc39.noarch Provides: python-sigprofilermatrixgenerator = 1.2.17-1.fc39 python3-sigprofilermatrixgenerator = 1.2.17-1.fc39 python3.11-sigprofilermatrixgenerator = 1.2.17-1.fc39 python3.11dist(sigprofilermatrixgenerator) = 1.2.17 python3dist(sigprofilermatrixgenerator) = 1.2.17 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: (python3.11dist(pandas) < 2~~ with python3.11dist(pandas) >= 0.23.4) python(abi) = 3.11 python3.11dist(matplotlib) >= 2.2.2 python3.11dist(numpy) >= 1.18.5 python3.11dist(scipy) >= 1.1 python3.11dist(sigprofilerplotting) >= 1.3.11 python3.11dist(statsmodels) >= 0.9 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/python-sigprofilermatrixgenerator-1.2.17-1.fc39.x86_64 Wrote: /builddir/build/SRPMS/python-sigprofilermatrixgenerator-1.2.17-1.fc39.src.rpm Wrote: /builddir/build/RPMS/python3-sigprofilermatrixgenerator-1.2.17-1.fc39.noarch.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.aepi3k + umask 022 + cd /builddir/build/BUILD + cd SigProfilerMatrixGenerator-1.2.17 + /usr/bin/rm -rf /builddir/build/BUILDROOT/python-sigprofilermatrixgenerator-1.2.17-1.fc39.x86_64 + RPM_EC=0 ++ jobs -p + exit 0 Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.tItIzW + umask 022 + cd /builddir/build/BUILD + rm -rf SigProfilerMatrixGenerator-1.2.17 SigProfilerMatrixGenerator-1.2.17.gemspec + RPM_EC=0 ++ jobs -p + exit 0 Child return code was: 0