%global buildid 197 %global octpkg COPASI %global with_python3 1 # Disable Java binding %global with_java 0 # Disable Octave binding ('virtual memory exhausted' issue) %global with_octave 0 %global with_perl 1 %global with_r 1 %ifarch %{mono_arches} %global with_mono 1 %else %global with_mono 0 %endif ##Use QWT6? (Experimental) %global with_qwt6 0 %if 0%{?with_octave} # Exclude .oct files from provides %global __provides_exclude_from ^%{octpkglibdir}/.*\\.oct$ %global octave_ver %(octave-config -p VERSION || echo 0) %endif %global _docdir_fmt %{name} Name: COPASI Summary: Biochemical network simulator Version: 4.24.%{buildid} Release: 5%{?dist} ##Artistic 2.0 is main license ##GPLv2+ is related to a Mixed Source Licensing Scenario ##with 'copasi/randomGenerator/Cmt19937.cpp' file ##GPLv3+ is related to a Mixed Source Licensing Scenario ##with 'copasi/function/CEvaluationParser_yacc.cpp' file ##BSD is related to a Mixed Source Licensing Scenario ##with 'copasi/randomGenerator/Cmt19937.cpp' file ##Any files with different licenses are not involved License: Artistic 2.0 and GPLv3+ and BSD URL: http://copasi.org/ Source0: https://github.com/copasi/COPASI/archive/Build-%{buildid}.tar.gz#/%{name}-Build-%{buildid}.tar.gz Source1: %{name}.appdata.xml # Whitelisting errors # https://fedoraproject.org/wiki/Taskotron/Tasks/dist.rpmlint#whitelist Source2: %{name}.rpmlintrc %if 0%{?with_qwt6} BuildRequires: qwt-devel %endif BuildRequires: qwt-qt5-devel BuildRequires: qwtplot3d-qt5-devel >= 0.3.1a-4 BuildRequires: qt5-qtbase-devel BuildRequires: qt5-qtwebkit-devel BuildRequires: qt5-qtdatavis3d-devel BuildRequires: libmml-qt5-devel BuildRequires: freeglut-devel BuildRequires: libsbml-devel BuildRequires: libsedml-devel >= 1:0.4.3-3 BuildRequires: libnuml-devel BuildRequires: libCombine-devel BuildRequires: zipper-devel BuildRequires: libsbw-devel BuildRequires: raptor-devel BuildRequires: mesa-libGL-devel BuildRequires: mesa-libGLU-devel BuildRequires: cppunit-devel BuildRequires: libcurl-devel BuildRequires: libxslt-devel BuildRequires: pkgconf-pkg-config %ifarch %{openblas_arches} BuildRequires: openblas-devel, openblas-srpm-macros %else BuildRequires: blas-devel BuildRequires: lapack-devel %endif BuildRequires: desktop-file-utils BuildRequires: swig BuildRequires: expat-devel BuildRequires: f2c BuildRequires: flex BuildRequires: cmake, gcc, gcc-c++ BuildRequires: bison BuildRequires: ImageMagick BuildRequires: libappstream-glib # Use new minizip starting from fedora 30 # rhbz #1632172 %if 0%{?fedora} == 29 BuildRequires: minizip-compat-devel %endif %if 0%{?fedora} == 28 BuildRequires: minizip-devel %endif %if 0%{?fedora} >= 30 #BuildRequires: minizip-devel >= 2.5.0 %endif Requires: %{name}-data = %{version}-%{release} Requires: libsedml%{?_isa} >= 1:0.4.3-3 Obsoletes: python2-%{name} < 4.24.197 ##This patch sets libraries' installation paths Patch0: %{name}-fix_install_libpaths.patch ##This patch sets paths to find QWT5, QTMML, SBW files on Fedora Patch1: %{name}-find_QWT5-QTMML-SBW.patch ##This patch sets paths to find QWT6, QTMML, SBW files on Fedora Patch3: %{name}-find_QWT6-QTMML-SBW.patch ##This patch sets paths to find QTPLOT3D-QT4 files on Fedora Patch2: %{name}-set_QWTPLOT3D_QT4.patch ##This patch fixes executable permissions of CopasiSE and CopasiUI Patch4: %{name}-fix_exe_permissions.patch ##This patch sets paths to find QTPLOT3D-QT5 files on Fedora Patch5: %{name}-set_QWTPLOT3D_QT5.patch ##This patch sets paths to find libCombine files on Fedora Patch6: COPASI-libCombine_paths.patch %description COPASI is a software application for simulation and analysis of biochemical networks and their dynamics. COPASI is a stand-alone program that supports models in the SBML standard and can simulate their behavior using ODEs or Gillespie's stochastic simulation algorithm; arbitrary discrete events can be included in such simulations. COPASI carries out several analyses of the network and its dynamics and has extensive support for parameter estimation and optimization. COPASI provides means to visualize data in customizable plots, histograms and animations of network diagrams. %package gui Summary: The COPASI graphical user interface Requires: %{name}-data = %{version}-%{release} Requires: %{name}-doc = %{version}-%{release} %description gui COPASI is a software application for simulation and analysis of biochemical networks and their dynamics. COPASI is a stand-alone program that supports models in the SBML standard and can simulate their behavior using ODEs or Gillespie's stochastic simulation algorithm; arbitrary discrete events can be included in such simulations. COPASI carries out several analyses of the network and its dynamics and has extensive support for parameter estimation and optimization. COPASI provides means to visualize data in customizable plots, histograms and animations of network diagrams. This package provides the COPASI graphical user interface. %package data Summary: COPASI data files BuildArch: noarch %description data This package provides the COPASI data, example and license files. %if 0%{?with_python3} %package -n python%{python3_pkgversion}-%{name} Summary: %{name} Python3 Bindings BuildRequires: python%{python3_pkgversion}-devel Obsoletes: python2-%{name} < 4.24.197 %{?python_provide:%python_provide python%{python3_pkgversion}-%{name}} %description -n python%{python3_pkgversion}-%{octpkg} This package provides the libraries to develop applications with COPASI Python3 bindings. %endif %if 0%{?with_java} %package -n java-%{octpkg} Summary: %{name} Java Bindings BuildRequires: java-1.8.0-openjdk-devel Requires: java-headless >= 1:minimal_required_version Requires: javapackages-tools %description -n java-%{octpkg} This package provides the libraries to develop applications with COPASI Java bindings. %endif %if 0%{?with_octave} %package -n octave-%{octpkg} Summary: %{name} Octave Bindings BuildRequires: octave-devel Requires: octave(api) = %{octave_api} Requires(post): octave Requires(postun): octave %description -n octave-%{octpkg} This package provides the libraries to develop applications with COPASI Octave bindings. %endif %if 0%{?with_perl} %package -n perl-%{octpkg} Summary: %{name} Perl Bindings BuildRequires: perl-interpreter BuildRequires: perl-devel BuildRequires: perl-generators BuildRequires: perl(ExtUtils::MakeMaker) Requires: perl(:MODULE_COMPAT_%(eval "`perl -V:version`"; echo $version)) %description -n perl-%{octpkg} This package provides the libraries to develop applications with COPASI Perl bindings. %endif %if 0%{?with_r} %package -n R-%{octpkg} Summary: %{name} R Bindings BuildRequires: R-devel, R-core-devel, tex(latex) Requires: R-core%{?_isa} %description -n R-%{octpkg} This package provides the libraries to develop applications with COPASI R bindings. %endif %if 0%{?with_mono} %package sharp Summary: %{name} Mono Bindings BuildRequires: xerces-c-devel, libxml2-devel, expat-devel BuildRequires: mono-core %description sharp This package provides the libraries to develop applications with COPASI C# bindings. %endif %package doc Summary: COPASI HTML documentation and examples BuildArch: noarch %description doc COPASI HTML documentation and examples. %prep %setup -q -n %{name}-Build-%{buildid} ##This an old and obsolete license file rm -f license.txt # Convert to utf-8 for file in `find copasi -type f \( -name "*.cpp" \)`; do iconv -f ISO-8859-1 -t UTF-8 -o $file.new $file && \ touch -r $file $file.new && \ mv $file.new $file done %patch0 -p0 %patch4 -p0 %patch6 -p0 %if 0%{?with_qwt6} %patch3 -p0 %else %patch1 -p0 %endif ##Set Qwt libdir sed -e 's|@@libdir@@|%{_libdir}|g' -i CMakeModules/FindQwtQt4.cmake %patch5 -p0 ####Set QTPLOT3D-QT5 paths sed -e 's|@@qtplot3d_includedir@@|%{_qt5_headerdir}/qwtplot3d-qt5|g' -i CMakeModules/FindQwtplot3dQt4.cmake sed -e 's|@@qtplot3d_libdir@@|%{_qt5_libdir}|g' -i CMakeModules/FindQwtplot3dQt4.cmake ##Set QtMmlQt5 paths sed -e 's|@@_libmml_includedir@@|%{_qt5_headerdir}/libmml-qt5|g' -i CMakeModules/FindQtMmlQt4.cmake sed -e 's|@@_libmml_libdir@@|%{_qt5_libdir}|g' -i CMakeModules/FindQtMmlQt4.cmake %build mkdir -p build && pushd build export CXXFLAGS="-DF2C_INTEGER=int -DF2C_LOGICAL=long %{optflags} %{__global_ldflags} -DCOPASI_OVERWRITE_USE_LAPACK -DNO_BLAS_WRAP" %ifarch %{openblas_arches} export LIBBLAS=libopenblas.so export INCBLAS=%{_includedir}/openblas %else export LIBBLAS=libblas.so export LIBLAPACK=liblapack.so export INCBLAS=%{_includedir} %endif %cmake -Wno-dev \ -DCOPASI_OVERRIDE_VERSION:STRING=%{version} \ %if 0%{?with_python3} -DENABLE_PYTHON:BOOL=ON \ -DPYTHON_EXECUTABLE:FILEPATH=%{__python3} \ -DPYTHON_INCLUDE_DIR:PATH=%{_includedir}/python%{python3_version}m \ -DPYTHON_LIBRARY:FILEPATH=%{_libdir}/libpython%{python3_version}m.so \ %else -DENABLE_PYTHON:BOOL=OFF \ %endif %if 0%{?with_java} -DENABLE_JAVA:BOOL=ON \ -DBUILD_JAVA_EXAMPLES:BOOL=OFF \ %endif %if 0%{?with_octave} -DENABLE_OCTAVE:BOOL=ON \ -DCOPASI_version:STRING=%{version} \ -DOCTAVE_INCLUDE_DIR:PATH=%{_includedir}/octave-%{octave_ver} \ -DOCTAVE_OCTINTERP_LIBRARY:FILEPATH=%{_libdir}/octave/%{octave_ver}/liboctinterp.so \ -DOCTAVE_OCTAVE_LIBRARY:FILEPATH=%{_libdir}/octave/%{octave_ver}/liboctave.so \ %endif %if 0%{?with_perl} -DENABLE_PERL:BOOL=ON \ %endif %if 0%{?with_r} -DENABLE_R:BOOL=ON \ -DR_INCLUDE_DIRS:PATH=%{_includedir}/R \ %endif %if 0%{?with_mono} -DENABLE_CSHARP:BOOL=ON \ -DBUILD_CS_EXAMPLES:BOOL=OFF \ %endif -DCSHARP_COMPILER:FILEPATH=%{_bindir}/mcs \ %if 0%{?with_qwt6} -DQWT_VERSION_STRING:STRING="%(pkg-config --modversion qwt)" \ %endif -DSELECT_QT=Qt5 \ -DQT_QMAKE_EXECUTABLE:FILEPATH=%{_bindir}/qmake-qt5 \ -DQWT_VERSION_STRING:STRING="%(pkg-config --modversion Qt5Qwt6)" \ -DQWT_LIBRARY:FILEPATH=%{_qt5_libdir}/libqwt-qt5.so \ -DQWT_INCLUDE_DIR:PATH=%{_qt5_headerdir}/qwt \ -DBUILD_GUI:BOOL=ON -DBUILD_COPASISBW:BOOL=ON --DENABLE_MML:BOOL=ON -DENABLE_USE_SBMLUNIT=ON \ -DCMAKE_SHARED_LINKER_FLAGS_RELEASE:STRING="%{__global_ldflags} -pthread" \ -DCMAKE_EXE_LINKER_FLAGS:STRING="%{__global_ldflags}" \ -DMML_INCLUDE_DIR:PATH=%{_qt5_headerdir}/libmml-qt5 -DMML_LIBRARY:FILEPATH=%{_qt5_libdir}/libmml.so \ -DENABLE_SBW_INTEGRATION=ON -DBUILD_CXX_EXAMPLES=OFF \ -DENABLE_COPASI_BANDED_GRAPH:BOOL=ON -DENABLE_COPASI_SEDML:BOOL=ON \ -DENABLE_COPASI_NONLIN_DYN_OSCILLATION:BOOL=ON -DENABLE_COPASI_EXTUNIT:BOOL=ON \ -DBLAS_blas_LIBRARY:FILEPATH=%{_libdir}/$LIBBLAS -DLAPACK_lapack_LIBRARY:FILEPATH=%{_libdir}/$LIBLAPACK -DCLAPACK_INCLUDE_DIR:PATH=$INCBLAS \ -DENABLE_FLEX_BISON:BOOL=ON -DENABLE_COPASI_PARAMETERFITTING_RESIDUAL_SCALING:BOOL=ON \ -DENABLE_WITH_MERGEMODEL:BOOL=ON -DENABLE_USE_MATH_CONTAINER:BOOL=ON \ -DLIBSBML_INCLUDE_DIR:PATH=%{_includedir}/sbml -DLIBSBML_SHARED:BOOL=ON -DLIBSBML_LIBRARY:FILEPATH=%{_libdir}/libsbml.so \ -DF2C_INCLUDE_DIR:PATH=%{_includedir} \ -DCMAKE_BUILD_TYPE:STRING=Release -DCMAKE_INSTALL_LIBDIR:PATH=%{_libdir} \ -DCMAKE_INSTALL_PREFIX:PATH=%{_prefix} -DENABLE_GPROF:BOOL=OFF \ -DCMAKE_VERBOSE_MAKEFILE:BOOL=TRUE -DCMAKE_COLOR_MAKEFILE:BOOL=ON \ -DENABLE_FLEX_BISON:BOOL=ON -DBISON_EXECUTABLE:FILEPATH=%{_bindir}/bison \ -DPREFER_STATIC:BOOL=OFF -DCMAKE_SKIP_RPATH:BOOL=YES .. %make_build popd %install %make_install -C build # Remove directory of examples %if 0%{?with_python3} rm -rf $RPM_BUILD_ROOT%{python3_sitearch}/copasi/examples %endif ##Just for R library %if 0%{?with_r} mkdir -p $RPM_BUILD_ROOT%{_libdir}/R/library %{_bindir}/R CMD INSTALL -l $RPM_BUILD_ROOT%{_libdir}/R/library build/copasi/bindings/R/%{name}_*.tar.gz test -d %{octpkg}/src && (cd %{octpkg}/src; rm -f *.o *.so) rm -rf $RPM_BUILD_ROOT%{_libdir}/R/library/%{octpkg}/R.css chmod a+x $RPM_BUILD_ROOT%{_libdir}/R/library/%{octpkg}/libs/COPASI.so %endif %if 0%{?with_octave} mkdir -p $RPM_BUILD_ROOT%{octpkgdir}/packinfo install -pm 644 copasi/ArtisticLicense.txt $RPM_BUILD_ROOT%{octpkgdir}/packinfo %endif ##Install .xpm icon files install -pm 644 copasi/UI/icons/Copasi48-Alpha.xpm $RPM_BUILD_ROOT%{_datadir}/icons/copasi/icons ##Make a .desktop file mkdir -p $RPM_BUILD_ROOT%{_datadir}/applications cat > $RPM_BUILD_ROOT%{_datadir}/applications/%{name}.desktop < - 4.24.197-5 - Rebuild for octave 4.4 * Mon Sep 24 2018 Antonio Trande - 4.24.197-4 - Bundle minizip on fedora 30+ (rhbz#1632172) (upstream bug #466) * Tue Aug 28 2018 Patrik Novotný - 4.24.197-2 - Rebuild for libsbw-2.12.2 * Tue Jul 31 2018 Antonio Trande - 4.24.197-1 - Release 4.24 build-197 - Erase obsolete patches - Drop Python2 binding - Disable BUILD_CXX_EXAMPLES * Thu Jul 12 2018 Fedora Release Engineering - 4.23.184-15 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild * Tue Jul 03 2018 Petr Pisar - 4.23.184-14 - Perl 5.28 rebuild * Fri Jun 29 2018 Jitka Plesnikova - 4.23.184-13 - Perl 5.28 rebuild * Tue Jun 19 2018 Miro Hrončok - 4.23.184-12 - Rebuilt for Python 3.7 * Wed Jun 06 2018 Antonio Trande - 4.23.184-11 - Rebuild for libsbml-5.17.0 * Mon Jun 04 2018 Antonio Trande - 4.23.184-10 - Patched for Qt-5.11.0 (upstream bugs #2625 #2629) * Fri Jun 01 2018 Antonio Trande - 4.23.184-9 - Remove directory of examples * Fri Jun 01 2018 Antonio Trande - 4.23.184-8 - Fix Python interpreter again - Add COPASI.rpmlintrc * Thu May 31 2018 Antonio Trande - 4.23.184-7 - Use always Qt5 * Fri May 18 2018 Antonio Trande - 4.23.184-6 - Fix Python interpreter * Thu May 17 2018 Antonio Trande - 4.23.184-5 - Rebuild with Qt5 * Wed May 16 2018 Tom Callaway - 4.23.184-4 - rebuild for R 3.5.0 * Sat May 05 2018 Antonio Trande - 4.23.184-3 - Now built with Qt5 - Built against libmml * Sun Apr 29 2018 Antonio Trande - 4.23.184-2 - Now built with Qt4 - Disable java/octave bindings * Sun Apr 29 2018 Antonio Trande - 4.23.184-1 - Update to version 4.23 -build 184 - Add libCombine, zipper, minizip dependencies - Build with Qt5 * Thu Feb 15 2018 Antonio Trande - 4.22.170-7 - Rebuild for libsbml-5.16.0 - Disable Octave binding on ARM ('virtual memory exhausted' issue) * Wed Feb 07 2018 Fedora Release Engineering - 4.22.170-6 - Rebuilt for https://fedoraproject.org/wiki/Fedora_28_Mass_Rebuild * Sun Dec 17 2017 Antonio Trande - 4.22.170-5 - Appdata file moved into metainfo data directory * Sun Dec 10 2017 Antonio Trande - 4.22.170-4 - Rebuild for libsbml-5.16.0 * Fri Nov 24 2017 Antonio Trande - 4.22.170-3 - Additional screeshots (bz#1517299) * Fri Nov 24 2017 Antonio Trande - 4.22.170-2 - Appdata file edited (bz#1517299) * Sat Nov 11 2017 Antonio Trande - 4.22.170-1 - Update to version 4.22 -build 170 - Use OpenBlas * Thu Oct 12 2017 Antonio Trande - 4.21.166-2 - Remove old Obsoletes * Tue Oct 10 2017 Antonio Trande - 4.21.166-1 - Update to version 4.21 -build 166 * Fri Sep 22 2017 Antonio Trande - 4.20.165-1 - Update to version 4.20 -build 165 * Tue Sep 05 2017 Antonio Trande - 4.20.159-1 - Update to version 4.20 -build 159 * Wed Aug 16 2017 Antonio Trande - 4.20.158-4 - Fix Python interpreter * Mon Aug 07 2017 Antonio Trande - 4.20.158-3 - Reintroduce command to disable generation of the debuginfo package on s390x (bz#1478284) * Tue Aug 01 2017 Antonio Trande - 4.20.158-2 - Make a new conditional macro to control stripping of symbols from object files * Mon Jul 31 2017 Antonio Trande - 4.20.158-1 - Update to version 4.20 -build 158 - Debuginfo packages built * Wed Jul 26 2017 Fedora Release Engineering - 4.19.156-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Mass_Rebuild * Tue Jul 11 2017 Antonio Trande - 4.19.156-1 - Update to version 4.19 -build 156 * Sun Jul 02 2017 Antonio Trande - 4.19.155-1 - Update to version 4.19 -build 155 (fix upstream bug #2428) * Sun Jun 04 2017 Jitka Plesnikova - 4.19.150-2 - Perl 5.26 rebuild * Fri Jun 02 2017 Antonio Trande - 4.19.150-1 - Update to version 4.19 -build 150 (fix upstream bug #2415) * Sat Apr 15 2017 Antonio Trande - 4.19.148-1 - Update to version 4.19 -build 148 (fix upstream bug #2403) * Fri Apr 14 2017 Antonio Trande - 4.19.147-3 - Rebuild for libsbml-5.15.0 * Thu Apr 06 2017 Antonio Trande - 4.19.147-2 - Override version from headers - Fix installation of examples and docs - Fix copasidir option - Strip executable binary/library files * Sun Mar 26 2017 Antonio Trande - 4.19.147-1 - Update to version 4.19 -build 147 - Fix Octave binding (upstream bug #2342) * Sat Mar 04 2017 Antonio Trande - 4.19.146-1 - Update to version 4.19 -build 146 * Fri Feb 10 2017 Fedora Release Engineering - 4.19.143-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_26_Mass_Rebuild * Sat Feb 04 2017 Antonio Trande - 4.19.143-1 - Update to version 4.19 -build 143 * Wed Jan 18 2017 Antonio Trande - 4.19.141-1 - Update to version 4.19 -build 141 * Thu Dec 22 2016 Antonio Trande - 4.18.138-1 - Update to build 138 (bug fixes from upstream) * Mon Dec 19 2016 Miro Hrončok - 4.18.136-4 - Rebuild for Python 3.6 * Tue Dec 13 2016 Antonio Trande - 4.18.136-3 - Exclude Octave-4.2 binding (upstream bug #2342) * Wed Dec 07 2016 Orion Poplawski - 4.18.136-2 - Rebuild for octave 4.2 * Tue Nov 29 2016 Antonio Trande - 4.18.136-1 - Update to build-136 (stable release) * Tue Nov 22 2016 Antonio Trande - 4.17-0.15.20161122gita15717 - Update to build-135 (stable release) * Thu Nov 17 2016 Antonio Trande - 4.17-0.14.20161115git6c93c0 - Update to build-134 (fix bugs 2324 2327) * Sun Nov 06 2016 Antonio Trande - 4.17-0.13.20161102gitbdf5cd - Fix memory issue on s390 * Fri Nov 04 2016 Antonio Trande - 4.17-0.12.20161102gitbdf5cd - Disable generation of debuginfo package on s390 * Wed Nov 02 2016 Antonio Trande - 4.17-0.11.20161102gitbdf5cd - Update to build-131 - Drop old patch * Mon Oct 17 2016 Antonio Trande - 4.17-0.10.20161013gitde9275 - Update to build-128 * Thu Oct 13 2016 Antonio Trande - 4.17-0.9.20161011git00c753 - Update to build-127 (bz#1384081) * Sun Sep 11 2016 Antonio Trande - 4.17-0.8.20160909git7c2623 - Update to build-123 * Wed Aug 17 2016 Antonio Trande - 4.17-0.7.20160720git31a978 - Rebuild for Python 3.5.2 * Wed Jul 27 2016 Antonio Trande - 4.17-0.6.20160720git31a978 - Update to build-119 * Tue Jul 19 2016 Fedora Release Engineering - 4.17-0.5.20160203git7b0f05 - https://fedoraproject.org/wiki/Changes/Automatic_Provides_for_Python_RPM_Packages * Tue May 17 2016 Jitka Plesnikova - 4.17-0.4.20160203git7b0f05 - Perl 5.24 rebuild * Tue Apr 19 2016 Antonio Trande - 4.17-0.3.20160203git7b0f05 - Rebuild for libSBML 5.13.0 * Sun Feb 07 2016 Antonio Trande - 4.17-0.2.20160203git7b0f05 - Exclude Octave binding on s390 * Wed Feb 03 2016 Antonio Trande - 4.17-0.1.20160203git7b0f05 - Rebuild with GCC-6.0 - Update to commit #7b0f05 - License for octave sub-package relocated - Debugging re-enabled * Wed Feb 03 2016 Fedora Release Engineering - 4.16-0.22.20150817git3bc4e9 - Rebuilt for https://fedoraproject.org/wiki/Fedora_24_Mass_Rebuild * Fri Jan 29 2016 Antonio Trande - 4.16-0.21.20150817git3bc4e9 - Renamed Python2 package * Sun Dec 13 2015 Antonio Trande - 4.16-0.20.20150817git3bc4e9 - Rebuild with GCC-5.3 * Sat Nov 14 2015 Antonio Trande - 4.16-0.19.20150817git3bc4e9 - Rebuilt for libsbml-5.12.0 and Python3.5 * Tue Nov 10 2015 Fedora Release Engineering - 4.16-0.18.20150817git3bc4e9 - Rebuilt for https://fedoraproject.org/wiki/Changes/python3.5 * Fri Nov 06 2015 Antonio Trande - 4.16-0.17.20150817git3bc4e9 - Hardened rebuild on Fedora <23 * Fri Nov 06 2015 Antonio Trande - 4.16-0.16.20150817git3bc4e9 - Rebuild with -pie on Fedora >22 * Sat Sep 19 2015 Antonio Trande - 4.16-0.15.20150817git3bc4e9 - Fixed COPASI-gui icon * Fri Sep 18 2015 Antonio Trande - 4.16-0.14.20150817git3bc4e9 - Rebuild for libsedml update * Tue Aug 25 2015 Antonio Trande - 4.16-0.13.20150817git3bc4e9 - Removed obsolete license file * Thu Aug 20 2015 Antonio Trande - 4.16-0.12.20150817git3bc4e9 - Bump to commit #3bc4e9 - Disabled debug package - Version tag changed to 4.16 (now it's built a pre-release) - CXX examples built * Mon Jul 27 2015 Antonio Trande - 4.16.101-11.20150725git435d61 - Bump to commit #435d61 - Disabled debug package * Tue Jul 21 2015 Antonio Trande - 4.16.101-10.20150707git192df4 - Patched CCopasiMethod.cpp (debuginfo issue caused by //) - Enabled debug package * Fri Jul 17 2015 Antonio Trande - 4.16.101-9.20150707git192df4 - Fixed License - Fixed executable permissions * Mon Jul 13 2015 Antonio Trande - 4.16.101-8.20150707git192df4 - Enabled COPASI-sharp build - Disabled debug packages * Sat Jul 11 2015 Antonio Trande - 4.16.101-7.20150707git192df4 - Disabled COPASI-sharp build * Thu Jul 09 2015 Antonio Trande - 4.16.101-6.20150707git192df4 - QWT5/6 lib paths set separately * Wed Jul 08 2015 Antonio Trande - 4.16.101-5.20150707git192df4 - Removed unused Qt macros * Tue Jul 07 2015 Antonio Trande - 4.16.101-4.20150707git192df4 - Update to post-release #192df4 - With QWT6 - Octave binding disabled * Tue Jun 30 2015 Antonio Trande - 4.16.101-3.20150626git678de9 - Update to post-release #678de9 (ARM fixing) - Without QWT6 - Packaged an appdata file for COPASI-gui * Wed Jun 17 2015 Antonio Trande - 4.16.101-2.20150617git865113 - Update to post-release #865113 - Built with clang on F23 64bit * Wed Jun 10 2015 Antonio Trande - 4.16.101-1 - Update to the release 4.16.101 * Mon Feb 02 2015 Antonio Trande - 4.14.90-6.20150126git4848fe - Defined F2C_INTEGER/F2C_LOGICAL variables based on arch * Mon Jan 26 2015 Antonio Trande - 4.14.90-5.20150126git4848fe - New commit (4848fe) - Defined new F2C_INTEGER/F2C_LOGICAL variables (fix bug(copasi)#2119) * Mon Jan 12 2015 Antonio Trande - 4.14.90-4.20150109git8f2d99 - New commit (8f2d99) * Wed Jan 07 2015 Antonio Trande - 4.14.90-3.20150109gite316ac - New commit (fix bug(copasi)#2121#2123) * Mon Jan 05 2015 Antonio Trande - 4.14.90-2.20150105git9b6683 - New commit (fix bug(copasi)#2119) * Tue Dec 30 2014 Antonio Trande - 4.14.90-1.20141208git3431bd - First package