%global __brp_check_rpaths %{nil}
%global __requires_exclude ^libmpi
%global packname  bmabart
%global packver   1.0
%global rlibdir   /usr/local/lib/R/library

Name:             R-CRAN-%{packname}
Version:          1.0
Release:          1%{?dist}%{?buildtag}
Summary:          Bayesian Mediation Analysis Using BART

License:          GPL (>= 2)
URL:              https://cran.r-project.org/package=%{packname}
Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz


BuildRequires:    R-devel >= 2.14.1
Requires:         R-core >= 2.14.1
BuildArch:        noarch
BuildRequires:    R-CRAN-BART 
BuildRequires:    R-CRAN-survival 
BuildRequires:    R-CRAN-gplots 
BuildRequires:    R-CRAN-lattice 
BuildRequires:    R-methods 
Requires:         R-CRAN-BART 
Requires:         R-CRAN-survival 
Requires:         R-CRAN-gplots 
Requires:         R-CRAN-lattice 
Requires:         R-methods 

%description
Used for Bayesian mediation analysis based on Bayesian additive Regression
Trees (BART). The analysis method is described in Yu and Li (2025)
"Mediation Analysis with Bayesian Additive Regression Trees", submitted
for publication.

%prep
%setup -q -c -n %{packname}

# fix end of executable files
find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \;
# prevent binary stripping
[ -d %{packname}/src ] && find %{packname}/src -type f -exec \
  sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true
[ -d %{packname}/src ] && find %{packname}/src/Make* -type f -exec \
  sed -i 's@-g0@@g' {} \; || true
# don't allow local prefix in executable scripts
find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' {} \;

%build

%install

mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
# remove buildroot from installed files
find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \;

%files
%{rlibdir}/%{packname}