%global __brp_check_rpaths %{nil}
%global __requires_exclude ^libmpi
%global packname  seliNDRIx
%global packver   0.1.2
%global rlibdir   /usr/local/lib/R/library

Name:             R-CRAN-%{packname}
Version:          0.1.2
Release:          1%{?dist}%{?buildtag}
Summary:          Construction of Selection Index

License:          MIT + file LICENSE
URL:              https://cran.r-project.org/package=%{packname}
Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz


BuildRequires:    R-devel >= 3.5
Requires:         R-core >= 3.5
BuildArch:        noarch
BuildRequires:    R-CRAN-dplyr 
BuildRequires:    R-CRAN-psych 
BuildRequires:    R-stats 
BuildRequires:    R-utils 
Requires:         R-CRAN-dplyr 
Requires:         R-CRAN-psych 
Requires:         R-stats 
Requires:         R-utils 

%description
Selection index is one of the efficient and acurrate method for selection
of animals. This package is useful for construction of selection indices.
It uses mixed and random model least squares analysis to estimate the
heritability of traits and genetic correlation between traits. The package
uses the sire model as it is considered as random effect. The genetic and
phenotypic (co)variances along with the relative economic values are used
to construct the selection index for any number of traits. It also
estimates the accuracy of the index and the genetic gain expected for
different traits. Fisher (1936) <doi:10.1111/j.1469-1809.1936.tb02137.x>.

%prep
%setup -q -c -n %{packname}

# fix end of executable files
find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \;
# prevent binary stripping
[ -d %{packname}/src ] && find %{packname}/src -type f -exec \
  sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true
[ -d %{packname}/src ] && find %{packname}/src/Make* -type f -exec \
  sed -i 's@-g0@@g' {} \; || true
# don't allow local prefix in executable scripts
find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' {} \;

%build

%install

mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
# remove buildroot from installed files
find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \;

%files
%{rlibdir}/%{packname}