%global packname  treefit
%global packver   1.0.0
%global rlibdir   /usr/local/lib/R/library

Name:             R-CRAN-%{packname}
Version:          1.0.0
Release:          3%{?dist}
Summary:          The First Software for Quantitative Trajectory Inference

License:          GPL (>= 3)
URL:              https://cran.r-project.org/package=%{packname}
Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz


BuildRequires:    R-devel
Requires:         R-core
BuildArch:        noarch
BuildRequires:    R-CRAN-ggplot2 
BuildRequires:    R-CRAN-igraph 
BuildRequires:    R-CRAN-patchwork 
BuildRequires:    R-CRAN-pracma 
Requires:         R-CRAN-ggplot2 
Requires:         R-CRAN-igraph 
Requires:         R-CRAN-patchwork 
Requires:         R-CRAN-pracma 

%description
Perform two types of analysis: 1) checking the goodness-of-fit of tree
models to your single-cell gene expression data; and 2) deciding which
tree best fits your data.

%prep
%setup -q -c -n %{packname}

find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \;

%build

%install

mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}

test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css

%files
%dir %{rlibdir}/%{packname}
%doc %{rlibdir}/%{packname}/html
%{rlibdir}/%{packname}/Meta
%{rlibdir}/%{packname}/help
%{rlibdir}/%{packname}/DESCRIPTION
%{rlibdir}/%{packname}/NAMESPACE
%doc %{rlibdir}/%{packname}/NEWS.md
%{rlibdir}/%{packname}/R
%doc %{rlibdir}/%{packname}/doc
%doc %{rlibdir}/%{packname}/WORDLIST
%{rlibdir}/%{packname}/INDEX