Mock Version: 3.0 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/python-sphire.spec'], chrootPath='/var/lib/mock/centos-stream+epel-9-x86_64-1651102702.780518/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1000gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.cqq1zudo:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueprintOutput=True) Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.cqq1zudo:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '18d44bade597461ca0869289f28d1899', '-D', '/var/lib/mock/centos-stream+epel-9-x86_64-1651102702.780518/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.cqq1zudo:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/python-sphire.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1650844800 Wrote: /builddir/build/SRPMS/python-sphire-1.4.2-1.el9.src.rpm Child return code was: 0 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -br --target x86_64 --nodeps /builddir/build/SPECS/python-sphire.spec'], chrootPath='/var/lib/mock/centos-stream+epel-9-x86_64-1651102702.780518/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1000gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.cqq1zudo:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueraiseExc=FalseprintOutput=True) Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.cqq1zudo:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '576b09ad0c3e40c3b8d50d33b5178226', '-D', '/var/lib/mock/centos-stream+epel-9-x86_64-1651102702.780518/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.cqq1zudo:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -br --target x86_64 --nodeps /builddir/build/SPECS/python-sphire.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1650844800 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.3KIbll + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf sphire-1.4.2 + /usr/bin/gzip -dc /builddir/build/SOURCES/sphire-1.4.2.tar.gz + /usr/bin/tar -xof - + STATUS=0 + '[' 0 -ne 0 ']' + cd sphire-1.4.2 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + RPM_EC=0 ++ jobs -p + exit 0 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.LuEZdM + umask 022 + cd /builddir/build/BUILD + cd sphire-1.4.2 + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(pip) >= 19' + echo 'python3dist(packaging)' + '[' -f pyproject.toml ']' + '[' -f setup.py ']' + echo 'python3dist(setuptools) >= 40.8' + echo 'python3dist(wheel)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + RPM_TOXENV=py39 + HOSTNAME=rpmbuild + /usr/bin/python3 -s /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 Handling setuptools >= 40.8 from default build backend Requirement satisfied: setuptools >= 40.8 (installed: setuptools 53.0.0) Handling wheel from default build backend Requirement not satisfied: wheel Exiting dependency generation pass: build backend + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/python-sphire-1.4.2-1.el9.buildreqs.nosrc.rpm Child return code was: 11 Dynamic buildrequires detected Going to install missing buildrequires. See root.log for details. ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -br --target x86_64 --nodeps /builddir/build/SPECS/python-sphire.spec'], chrootPath='/var/lib/mock/centos-stream+epel-9-x86_64-1651102702.780518/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1000gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.cqq1zudo:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueraiseExc=FalseprintOutput=True) Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.cqq1zudo:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', 'b153fa1e2629479d9d880ddff5fd826a', '-D', '/var/lib/mock/centos-stream+epel-9-x86_64-1651102702.780518/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.cqq1zudo:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -br --target x86_64 --nodeps /builddir/build/SPECS/python-sphire.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1650844800 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.vSvD1w + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf sphire-1.4.2 + /usr/bin/tar -xof - + /usr/bin/gzip -dc /builddir/build/SOURCES/sphire-1.4.2.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd sphire-1.4.2 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + RPM_EC=0 ++ jobs -p + exit 0 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.etEEY9 + umask 022 + cd /builddir/build/BUILD + cd sphire-1.4.2 + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(pip) >= 19' + echo 'python3dist(packaging)' + '[' -f pyproject.toml ']' + '[' -f setup.py ']' + echo 'python3dist(setuptools) >= 40.8' + echo 'python3dist(wheel)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + RPM_TOXENV=py39 + HOSTNAME=rpmbuild + /usr/bin/python3 -s /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 Handling setuptools >= 40.8 from default build backend Requirement satisfied: setuptools >= 40.8 (installed: setuptools 53.0.0) Handling wheel from default build backend Requirement satisfied: wheel (installed: wheel 0.36.2) HOOK STDOUT: running egg_info HOOK STDOUT: writing sphire.egg-info/PKG-INFO HOOK STDOUT: writing dependency_links to sphire.egg-info/dependency_links.txt HOOK STDOUT: writing entry points to sphire.egg-info/entry_points.txt HOOK STDOUT: writing top-level names to sphire.egg-info/top_level.txt HOOK STDOUT: reading manifest file 'sphire.egg-info/SOURCES.txt' HOOK STDOUT: reading manifest template 'MANIFEST.in' HOOK STDOUT: writing manifest file 'sphire.egg-info/SOURCES.txt' Handling wheel from get_requires_for_build_wheel Requirement satisfied: wheel (installed: wheel 0.36.2) HOOK STDOUT: running dist_info HOOK STDOUT: writing sphire.egg-info/PKG-INFO HOOK STDOUT: writing dependency_links to sphire.egg-info/dependency_links.txt HOOK STDOUT: writing entry points to sphire.egg-info/entry_points.txt HOOK STDOUT: writing top-level names to sphire.egg-info/top_level.txt HOOK STDOUT: reading manifest file 'sphire.egg-info/SOURCES.txt' HOOK STDOUT: reading manifest template 'MANIFEST.in' HOOK STDOUT: writing manifest file 'sphire.egg-info/SOURCES.txt' HOOK STDOUT: creating '/builddir/build/BUILD/sphire-1.4.2/sphire.dist-info' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/python-sphire-1.4.2-1.el9.buildreqs.nosrc.rpm Child return code was: 11 Dynamic buildrequires detected Going to install missing buildrequires. See root.log for details. ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -ba --noprep --target x86_64 --nodeps /builddir/build/SPECS/python-sphire.spec'], chrootPath='/var/lib/mock/centos-stream+epel-9-x86_64-1651102702.780518/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1000gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.cqq1zudo:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueprintOutput=True) Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.cqq1zudo:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', 'd82cb5014f3d47ddaef6d7e0b7a44dfb', '-D', '/var/lib/mock/centos-stream+epel-9-x86_64-1651102702.780518/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.cqq1zudo:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -ba --noprep --target x86_64 --nodeps /builddir/build/SPECS/python-sphire.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1650844800 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.oqCttB + umask 022 + cd /builddir/build/BUILD + cd sphire-1.4.2 + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(pip) >= 19' + echo 'python3dist(packaging)' + '[' -f pyproject.toml ']' + '[' -f setup.py ']' + echo 'python3dist(setuptools) >= 40.8' + echo 'python3dist(wheel)' + rm -rfv sphire.dist-info/ removed 'sphire.dist-info/METADATA' removed 'sphire.dist-info/entry_points.txt' removed 'sphire.dist-info/top_level.txt' removed directory 'sphire.dist-info/' + '[' -f /usr/bin/python3 ']' + RPM_TOXENV=py39 + HOSTNAME=rpmbuild + /usr/bin/python3 -s /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 Handling setuptools >= 40.8 from default build backend Requirement satisfied: setuptools >= 40.8 (installed: setuptools 53.0.0) Handling wheel from default build backend Requirement satisfied: wheel (installed: wheel 0.36.2) HOOK STDOUT: running egg_info HOOK STDOUT: creating sphire.egg-info HOOK STDOUT: writing sphire.egg-info/PKG-INFO HOOK STDOUT: writing dependency_links to sphire.egg-info/dependency_links.txt HOOK STDOUT: writing entry points to sphire.egg-info/entry_points.txt HOOK STDOUT: writing top-level names to sphire.egg-info/top_level.txt HOOK STDOUT: writing manifest file 'sphire.egg-info/SOURCES.txt' HOOK STDOUT: reading manifest file 'sphire.egg-info/SOURCES.txt' HOOK STDOUT: reading manifest template 'MANIFEST.in' HOOK STDOUT: writing manifest file 'sphire.egg-info/SOURCES.txt' Handling wheel from get_requires_for_build_wheel Requirement satisfied: wheel (installed: wheel 0.36.2) HOOK STDOUT: running dist_info HOOK STDOUT: writing sphire.egg-info/PKG-INFO HOOK STDOUT: writing dependency_links to sphire.egg-info/dependency_links.txt HOOK STDOUT: writing entry points to sphire.egg-info/entry_points.txt HOOK STDOUT: writing top-level names to sphire.egg-info/top_level.txt HOOK STDOUT: reading manifest file 'sphire.egg-info/SOURCES.txt' HOOK STDOUT: reading manifest template 'MANIFEST.in' HOOK STDOUT: writing manifest file 'sphire.egg-info/SOURCES.txt' HOOK STDOUT: creating '/builddir/build/BUILD/sphire-1.4.2/sphire.dist-info' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.q89D3r + umask 022 + cd /builddir/build/BUILD + cd sphire-1.4.2 + mkdir -p /builddir/build/BUILD/sphire-1.4.2/.pyproject-builddir + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64-v2 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 ' + TMPDIR=/builddir/build/BUILD/sphire-1.4.2/.pyproject-builddir + /usr/bin/python3 -m pip wheel --wheel-dir /builddir/build/BUILD/sphire-1.4.2/pyproject-wheeldir --no-deps --use-pep517 --no-build-isolation --disable-pip-version-check --no-clean --progress-bar off --verbose . Processing /builddir/build/BUILD/sphire-1.4.2 Preparing metadata (pyproject.toml): started Running command Preparing metadata (pyproject.toml) running dist_info creating /builddir/build/BUILD/sphire-1.4.2/.pyproject-builddir/pip-modern-metadata-pjjivlyi/sphire.egg-info writing /builddir/build/BUILD/sphire-1.4.2/.pyproject-builddir/pip-modern-metadata-pjjivlyi/sphire.egg-info/PKG-INFO writing dependency_links to /builddir/build/BUILD/sphire-1.4.2/.pyproject-builddir/pip-modern-metadata-pjjivlyi/sphire.egg-info/dependency_links.txt writing entry points to /builddir/build/BUILD/sphire-1.4.2/.pyproject-builddir/pip-modern-metadata-pjjivlyi/sphire.egg-info/entry_points.txt writing top-level names to /builddir/build/BUILD/sphire-1.4.2/.pyproject-builddir/pip-modern-metadata-pjjivlyi/sphire.egg-info/top_level.txt writing manifest file '/builddir/build/BUILD/sphire-1.4.2/.pyproject-builddir/pip-modern-metadata-pjjivlyi/sphire.egg-info/SOURCES.txt' reading manifest file '/builddir/build/BUILD/sphire-1.4.2/.pyproject-builddir/pip-modern-metadata-pjjivlyi/sphire.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' writing manifest file '/builddir/build/BUILD/sphire-1.4.2/.pyproject-builddir/pip-modern-metadata-pjjivlyi/sphire.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/sphire-1.4.2/.pyproject-builddir/pip-modern-metadata-pjjivlyi/sphire.dist-info' Preparing metadata (pyproject.toml): finished with status 'done' Building wheels for collected packages: sphire Building wheel for sphire (pyproject.toml): started Running command Building wheel for sphire (pyproject.toml) running bdist_wheel running build running build_py creating build creating build/lib creating build/lib/sphire copying sphire/__init__.py -> build/lib/sphire creating build/lib/sphire/libpy copying sphire/libpy/sp_utilities.py -> build/lib/sphire/libpy copying sphire/libpy/sp_user_functions_meridien.py -> build/lib/sphire/libpy copying sphire/libpy/sp_user_functions.py -> build/lib/sphire/libpy copying sphire/libpy/sp_statistics.py -> build/lib/sphire/libpy copying sphire/libpy/sp_sparx.py -> build/lib/sphire/libpy copying sphire/libpy/sp_reconstruction.py -> build/lib/sphire/libpy copying sphire/libpy/sp_projection.py -> build/lib/sphire/libpy copying sphire/libpy/sp_pixel_error.py -> build/lib/sphire/libpy copying sphire/libpy/sp_multi_shc.py -> build/lib/sphire/libpy copying sphire/libpy/sp_morphology.py -> build/lib/sphire/libpy copying sphire/libpy/sp_logger.py -> build/lib/sphire/libpy copying sphire/libpy/sp_isac.py -> build/lib/sphire/libpy copying sphire/libpy/sp_global_def.py -> build/lib/sphire/libpy copying sphire/libpy/sp_fundamentals.py -> build/lib/sphire/libpy copying sphire/libpy/sp_filter.py -> build/lib/sphire/libpy copying sphire/libpy/sp_development.py -> build/lib/sphire/libpy copying sphire/libpy/sp_ctf_refine_plotting.py -> build/lib/sphire/libpy copying sphire/libpy/sp_ctf_refine_io.py -> build/lib/sphire/libpy copying sphire/libpy/sp_applications.py -> build/lib/sphire/libpy copying sphire/libpy/sp_alignment.py -> build/lib/sphire/libpy copying sphire/libpy/__init__.py -> build/lib/sphire/libpy creating build/lib/sphire/bin copying sphire/bin/sp_window.py -> build/lib/sphire/bin copying sphire/bin/sp_viper.py -> build/lib/sphire/bin copying sphire/bin/sp_varimax.py -> build/lib/sphire/bin copying sphire/bin/sp_var.py -> build/lib/sphire/bin copying sphire/bin/sp_unblur_old.py -> build/lib/sphire/bin copying sphire/bin/sp_unblur.py -> build/lib/sphire/bin copying sphire/bin/sp_transform2d.py -> build/lib/sphire/bin copying sphire/bin/sp_sx.py -> build/lib/sphire/bin copying sphire/bin/sp_summovie.py -> build/lib/sphire/bin copying sphire/bin/sp_stability.py -> build/lib/sphire/bin copying sphire/bin/sp_ssnr3d.py -> build/lib/sphire/bin copying sphire/bin/sp_spliteigen.py -> build/lib/sphire/bin copying sphire/bin/sp_sphire2relion.py -> build/lib/sphire/bin copying sphire/bin/sp_sort3d_depth.py -> build/lib/sphire/bin copying sphire/bin/sp_sort3d.py -> build/lib/sphire/bin copying sphire/bin/sp_signalsubtract.py -> build/lib/sphire/bin copying sphire/bin/sp_shiftali.py -> build/lib/sphire/bin copying sphire/bin/sp_rviper.py -> build/lib/sphire/bin copying sphire/bin/sp_rsort3d.py -> build/lib/sphire/bin copying sphire/bin/sp_rot_sym.py -> build/lib/sphire/bin copying sphire/bin/sp_rewindow.py -> build/lib/sphire/bin copying sphire/bin/sp_resample.py -> build/lib/sphire/bin copying sphire/bin/sp_reproducibility.py -> build/lib/sphire/bin copying sphire/bin/sp_relion2sphire.py -> build/lib/sphire/bin copying sphire/bin/sp_recons3d_n.py -> build/lib/sphire/bin copying sphire/bin/sp_recons3d_f.py -> build/lib/sphire/bin copying sphire/bin/sp_realignment.py -> build/lib/sphire/bin copying sphire/bin/sp_real.py -> build/lib/sphire/bin copying sphire/bin/sp_project3d.py -> build/lib/sphire/bin copying sphire/bin/sp_proj_stability.py -> build/lib/sphire/bin copying sphire/bin/sp_proj_compare.py -> build/lib/sphire/bin copying sphire/bin/sp_process.py -> build/lib/sphire/bin copying sphire/bin/sp_prepare_2d_forPCA.py -> build/lib/sphire/bin copying sphire/bin/sp_plot_projs_distrib.py -> build/lib/sphire/bin copying sphire/bin/sp_pipe.py -> build/lib/sphire/bin copying sphire/bin/sp_pdb2em.py -> build/lib/sphire/bin copying sphire/bin/sp_pca.py -> build/lib/sphire/bin copying sphire/bin/sp_params_3D_to_2D.py -> build/lib/sphire/bin copying sphire/bin/sp_params_2D_to_3D.py -> build/lib/sphire/bin copying sphire/bin/sp_multi_assign.py -> build/lib/sphire/bin copying sphire/bin/sp_multi_ali2d.py -> build/lib/sphire/bin copying sphire/bin/sp_mref_alignment.py -> build/lib/sphire/bin copying sphire/bin/sp_mref_ali3d.py -> build/lib/sphire/bin copying sphire/bin/sp_mref_ali2d.py -> build/lib/sphire/bin copying sphire/bin/sp_montage.py -> build/lib/sphire/bin copying sphire/bin/sp_micrograh_selection.py -> build/lib/sphire/bin copying sphire/bin/sp_meridien_sort.py -> build/lib/sphire/bin copying sphire/bin/sp_meridien_pre_things.py -> build/lib/sphire/bin copying sphire/bin/sp_meridien_beta.py -> build/lib/sphire/bin copying sphire/bin/sp_meridien_alpha2.py -> build/lib/sphire/bin copying sphire/bin/sp_meridien_alpha.py -> build/lib/sphire/bin copying sphire/bin/sp_meridien.py -> build/lib/sphire/bin copying sphire/bin/sp_mask.py -> build/lib/sphire/bin copying sphire/bin/sp_locres.py -> build/lib/sphire/bin copying sphire/bin/sp_local_ali3dm.py -> build/lib/sphire/bin copying sphire/bin/sp_local_ali3d.py -> build/lib/sphire/bin copying sphire/bin/sp_local_ali2d.py -> build/lib/sphire/bin copying sphire/bin/sp_k_means_stable.py -> build/lib/sphire/bin copying sphire/bin/sp_k_means_groups.py -> build/lib/sphire/bin copying sphire/bin/sp_k_means.py -> build/lib/sphire/bin copying sphire/bin/sp_isac2.py -> build/lib/sphire/bin copying sphire/bin/sp_imgstat.py -> build/lib/sphire/bin copying sphire/bin/sp_ihrsr.py -> build/lib/sphire/bin copying sphire/bin/sp_helixboxer.py -> build/lib/sphire/bin copying sphire/bin/sp_helical_demo.py -> build/lib/sphire/bin copying sphire/bin/sp_header.py -> build/lib/sphire/bin copying sphire/bin/sp_hac_clustering.py -> build/lib/sphire/bin copying sphire/bin/sp_hac_averages.py -> build/lib/sphire/bin copying sphire/bin/sp_gui_unblur.py -> build/lib/sphire/bin copying sphire/bin/sp_gui_meridien.py -> build/lib/sphire/bin copying sphire/bin/sp_gui_cter.py -> build/lib/sphire/bin copying sphire/bin/sp_gui.py -> build/lib/sphire/bin copying sphire/bin/sp_genbuf.py -> build/lib/sphire/bin copying sphire/bin/sp_fit_error.py -> build/lib/sphire/bin copying sphire/bin/sp_find_struct.py -> build/lib/sphire/bin copying sphire/bin/sp_filterlocal.py -> build/lib/sphire/bin copying sphire/bin/sp_filrecons3d.py -> build/lib/sphire/bin copying sphire/bin/sp_factcoords.py -> build/lib/sphire/bin copying sphire/bin/sp_eval_isac.py -> build/lib/sphire/bin copying sphire/bin/sp_ctf_refine_selection.py -> build/lib/sphire/bin copying sphire/bin/sp_ctf_refine.py -> build/lib/sphire/bin copying sphire/bin/sp_ctf.py -> build/lib/sphire/bin copying sphire/bin/sp_cter.py -> build/lib/sphire/bin copying sphire/bin/sp_cryolo_train.py -> build/lib/sphire/bin copying sphire/bin/sp_cryolo_predict.py -> build/lib/sphire/bin copying sphire/bin/sp_cryolo_boxmanager.py -> build/lib/sphire/bin copying sphire/bin/sp_cpy.py -> build/lib/sphire/bin copying sphire/bin/sp_copyfromtif.py -> build/lib/sphire/bin copying sphire/bin/sp_convert_relionnew_to_relionold.py -> build/lib/sphire/bin copying sphire/bin/sp_consistency.py -> build/lib/sphire/bin copying sphire/bin/sp_compute_isac_avg.py -> build/lib/sphire/bin copying sphire/bin/sp_compare2d.py -> build/lib/sphire/bin copying sphire/bin/sp_cinderella_pred.py -> build/lib/sphire/bin copying sphire/bin/sp_chains.py -> build/lib/sphire/bin copying sphire/bin/sp_center_projections.py -> build/lib/sphire/bin copying sphire/bin/sp_batch.py -> build/lib/sphire/bin copying sphire/bin/sp_ave_ali.py -> build/lib/sphire/bin copying sphire/bin/sp_auto.py -> build/lib/sphire/bin copying sphire/bin/sp_ali_vol.py -> build/lib/sphire/bin copying sphire/bin/sp_ali3d.py -> build/lib/sphire/bin copying sphire/bin/sp_ali2d_mref.py -> build/lib/sphire/bin copying sphire/bin/sp_ali2d.py -> build/lib/sphire/bin copying sphire/bin/sp_3dvariability.py -> build/lib/sphire/bin copying sphire/bin/__init__.py -> build/lib/sphire/bin creating build/lib/sphire/libpy/prior_calculation copying sphire/libpy/prior_calculation/sp_helix_sphire.py -> build/lib/sphire/libpy/prior_calculation copying sphire/libpy/prior_calculation/sp_helix_relion.py -> build/lib/sphire/libpy/prior_calculation copying sphire/libpy/prior_calculation/sp_helix_prior.py -> build/lib/sphire/libpy/prior_calculation copying sphire/libpy/prior_calculation/sp_helix_lib.py -> build/lib/sphire/libpy/prior_calculation copying sphire/libpy/prior_calculation/sp_helix_fundamentals.py -> build/lib/sphire/libpy/prior_calculation copying sphire/libpy/prior_calculation/__init__.py -> build/lib/sphire/libpy/prior_calculation installing to build/bdist.linux-x86_64/wheel running install running install_lib creating build/bdist.linux-x86_64 creating build/bdist.linux-x86_64/wheel creating build/bdist.linux-x86_64/wheel/sphire creating build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/__init__.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_3dvariability.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_ali2d.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_ali2d_mref.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_ali3d.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_ali_vol.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_auto.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_ave_ali.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_batch.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_center_projections.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_chains.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_cinderella_pred.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_compare2d.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_compute_isac_avg.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_consistency.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_convert_relionnew_to_relionold.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_copyfromtif.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_cpy.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_cryolo_boxmanager.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_cryolo_predict.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_cryolo_train.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_cter.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_ctf.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_ctf_refine.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_ctf_refine_selection.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_eval_isac.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_factcoords.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_filrecons3d.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_filterlocal.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_find_struct.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_fit_error.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_genbuf.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_gui.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_gui_cter.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_gui_meridien.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_gui_unblur.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_hac_averages.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_hac_clustering.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_header.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_helical_demo.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_helixboxer.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_ihrsr.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_imgstat.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_isac2.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_k_means.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_k_means_groups.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_k_means_stable.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_local_ali2d.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_local_ali3d.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_local_ali3dm.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_locres.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_mask.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_meridien.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_meridien_alpha.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_meridien_alpha2.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_meridien_beta.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_meridien_pre_things.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_meridien_sort.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_micrograh_selection.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_montage.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_mref_ali2d.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_mref_ali3d.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_mref_alignment.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_multi_ali2d.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_multi_assign.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_params_2D_to_3D.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_params_3D_to_2D.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_pca.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_pdb2em.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_pipe.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_plot_projs_distrib.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_prepare_2d_forPCA.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_process.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_proj_compare.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_proj_stability.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_project3d.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_real.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_realignment.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_recons3d_f.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_recons3d_n.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_relion2sphire.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_reproducibility.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_resample.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_rewindow.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_rot_sym.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_rsort3d.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_rviper.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_shiftali.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_signalsubtract.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_sort3d.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_sort3d_depth.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_sphire2relion.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_spliteigen.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_ssnr3d.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_stability.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_summovie.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_sx.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_transform2d.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_unblur.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_unblur_old.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_var.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_varimax.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_viper.py -> build/bdist.linux-x86_64/wheel/sphire/bin copying build/lib/sphire/bin/sp_window.py -> build/bdist.linux-x86_64/wheel/sphire/bin creating build/bdist.linux-x86_64/wheel/sphire/libpy creating build/bdist.linux-x86_64/wheel/sphire/libpy/prior_calculation copying build/lib/sphire/libpy/prior_calculation/__init__.py -> build/bdist.linux-x86_64/wheel/sphire/libpy/prior_calculation copying build/lib/sphire/libpy/prior_calculation/sp_helix_fundamentals.py -> build/bdist.linux-x86_64/wheel/sphire/libpy/prior_calculation copying build/lib/sphire/libpy/prior_calculation/sp_helix_lib.py -> build/bdist.linux-x86_64/wheel/sphire/libpy/prior_calculation copying build/lib/sphire/libpy/prior_calculation/sp_helix_prior.py -> build/bdist.linux-x86_64/wheel/sphire/libpy/prior_calculation copying build/lib/sphire/libpy/prior_calculation/sp_helix_relion.py -> build/bdist.linux-x86_64/wheel/sphire/libpy/prior_calculation copying build/lib/sphire/libpy/prior_calculation/sp_helix_sphire.py -> build/bdist.linux-x86_64/wheel/sphire/libpy/prior_calculation copying build/lib/sphire/libpy/__init__.py -> build/bdist.linux-x86_64/wheel/sphire/libpy copying build/lib/sphire/libpy/sp_alignment.py -> build/bdist.linux-x86_64/wheel/sphire/libpy copying build/lib/sphire/libpy/sp_applications.py -> build/bdist.linux-x86_64/wheel/sphire/libpy copying build/lib/sphire/libpy/sp_ctf_refine_io.py -> build/bdist.linux-x86_64/wheel/sphire/libpy copying build/lib/sphire/libpy/sp_ctf_refine_plotting.py -> build/bdist.linux-x86_64/wheel/sphire/libpy copying build/lib/sphire/libpy/sp_development.py -> build/bdist.linux-x86_64/wheel/sphire/libpy copying build/lib/sphire/libpy/sp_filter.py -> build/bdist.linux-x86_64/wheel/sphire/libpy copying build/lib/sphire/libpy/sp_fundamentals.py -> build/bdist.linux-x86_64/wheel/sphire/libpy copying build/lib/sphire/libpy/sp_global_def.py -> build/bdist.linux-x86_64/wheel/sphire/libpy copying build/lib/sphire/libpy/sp_isac.py -> build/bdist.linux-x86_64/wheel/sphire/libpy copying build/lib/sphire/libpy/sp_logger.py -> build/bdist.linux-x86_64/wheel/sphire/libpy copying build/lib/sphire/libpy/sp_morphology.py -> build/bdist.linux-x86_64/wheel/sphire/libpy copying build/lib/sphire/libpy/sp_multi_shc.py -> build/bdist.linux-x86_64/wheel/sphire/libpy copying build/lib/sphire/libpy/sp_pixel_error.py -> build/bdist.linux-x86_64/wheel/sphire/libpy copying build/lib/sphire/libpy/sp_projection.py -> build/bdist.linux-x86_64/wheel/sphire/libpy copying build/lib/sphire/libpy/sp_reconstruction.py -> build/bdist.linux-x86_64/wheel/sphire/libpy copying build/lib/sphire/libpy/sp_sparx.py -> build/bdist.linux-x86_64/wheel/sphire/libpy copying build/lib/sphire/libpy/sp_statistics.py -> build/bdist.linux-x86_64/wheel/sphire/libpy copying build/lib/sphire/libpy/sp_user_functions.py -> build/bdist.linux-x86_64/wheel/sphire/libpy copying build/lib/sphire/libpy/sp_user_functions_meridien.py -> build/bdist.linux-x86_64/wheel/sphire/libpy copying build/lib/sphire/libpy/sp_utilities.py -> build/bdist.linux-x86_64/wheel/sphire/libpy copying build/lib/sphire/__init__.py -> build/bdist.linux-x86_64/wheel/sphire running install_egg_info running egg_info creating sphire.egg-info writing sphire.egg-info/PKG-INFO writing dependency_links to sphire.egg-info/dependency_links.txt writing entry points to sphire.egg-info/entry_points.txt writing top-level names to sphire.egg-info/top_level.txt writing manifest file 'sphire.egg-info/SOURCES.txt' reading manifest file 'sphire.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' writing manifest file 'sphire.egg-info/SOURCES.txt' Copying sphire.egg-info to build/bdist.linux-x86_64/wheel/sphire-1.4.2-py3.9.egg-info running install_scripts creating build/bdist.linux-x86_64/wheel/sphire-1.4.2.dist-info/WHEEL creating '/builddir/build/BUILD/sphire-1.4.2/.pyproject-builddir/pip-wheel-zuquqka5/tmphk_e7npl/sphire-1.4.2-py3-none-any.whl' and adding 'build/bdist.linux-x86_64/wheel' to it adding 'sphire/__init__.py' adding 'sphire/bin/__init__.py' adding 'sphire/bin/sp_3dvariability.py' adding 'sphire/bin/sp_ali2d.py' adding 'sphire/bin/sp_ali2d_mref.py' adding 'sphire/bin/sp_ali3d.py' adding 'sphire/bin/sp_ali_vol.py' adding 'sphire/bin/sp_auto.py' adding 'sphire/bin/sp_ave_ali.py' adding 'sphire/bin/sp_batch.py' adding 'sphire/bin/sp_center_projections.py' adding 'sphire/bin/sp_chains.py' adding 'sphire/bin/sp_cinderella_pred.py' adding 'sphire/bin/sp_compare2d.py' adding 'sphire/bin/sp_compute_isac_avg.py' adding 'sphire/bin/sp_consistency.py' adding 'sphire/bin/sp_convert_relionnew_to_relionold.py' adding 'sphire/bin/sp_copyfromtif.py' adding 'sphire/bin/sp_cpy.py' adding 'sphire/bin/sp_cryolo_boxmanager.py' adding 'sphire/bin/sp_cryolo_predict.py' adding 'sphire/bin/sp_cryolo_train.py' adding 'sphire/bin/sp_cter.py' adding 'sphire/bin/sp_ctf.py' adding 'sphire/bin/sp_ctf_refine.py' adding 'sphire/bin/sp_ctf_refine_selection.py' adding 'sphire/bin/sp_eval_isac.py' adding 'sphire/bin/sp_factcoords.py' adding 'sphire/bin/sp_filrecons3d.py' adding 'sphire/bin/sp_filterlocal.py' adding 'sphire/bin/sp_find_struct.py' adding 'sphire/bin/sp_fit_error.py' adding 'sphire/bin/sp_genbuf.py' adding 'sphire/bin/sp_gui.py' adding 'sphire/bin/sp_gui_cter.py' adding 'sphire/bin/sp_gui_meridien.py' adding 'sphire/bin/sp_gui_unblur.py' adding 'sphire/bin/sp_hac_averages.py' adding 'sphire/bin/sp_hac_clustering.py' adding 'sphire/bin/sp_header.py' adding 'sphire/bin/sp_helical_demo.py' adding 'sphire/bin/sp_helixboxer.py' adding 'sphire/bin/sp_ihrsr.py' adding 'sphire/bin/sp_imgstat.py' adding 'sphire/bin/sp_isac2.py' adding 'sphire/bin/sp_k_means.py' adding 'sphire/bin/sp_k_means_groups.py' adding 'sphire/bin/sp_k_means_stable.py' adding 'sphire/bin/sp_local_ali2d.py' adding 'sphire/bin/sp_local_ali3d.py' adding 'sphire/bin/sp_local_ali3dm.py' adding 'sphire/bin/sp_locres.py' adding 'sphire/bin/sp_mask.py' adding 'sphire/bin/sp_meridien.py' adding 'sphire/bin/sp_meridien_alpha.py' adding 'sphire/bin/sp_meridien_alpha2.py' adding 'sphire/bin/sp_meridien_beta.py' adding 'sphire/bin/sp_meridien_pre_things.py' adding 'sphire/bin/sp_meridien_sort.py' adding 'sphire/bin/sp_micrograh_selection.py' adding 'sphire/bin/sp_montage.py' adding 'sphire/bin/sp_mref_ali2d.py' adding 'sphire/bin/sp_mref_ali3d.py' adding 'sphire/bin/sp_mref_alignment.py' adding 'sphire/bin/sp_multi_ali2d.py' adding 'sphire/bin/sp_multi_assign.py' adding 'sphire/bin/sp_params_2D_to_3D.py' adding 'sphire/bin/sp_params_3D_to_2D.py' adding 'sphire/bin/sp_pca.py' adding 'sphire/bin/sp_pdb2em.py' adding 'sphire/bin/sp_pipe.py' adding 'sphire/bin/sp_plot_projs_distrib.py' adding 'sphire/bin/sp_prepare_2d_forPCA.py' adding 'sphire/bin/sp_process.py' adding 'sphire/bin/sp_proj_compare.py' adding 'sphire/bin/sp_proj_stability.py' adding 'sphire/bin/sp_project3d.py' adding 'sphire/bin/sp_real.py' adding 'sphire/bin/sp_realignment.py' adding 'sphire/bin/sp_recons3d_f.py' adding 'sphire/bin/sp_recons3d_n.py' adding 'sphire/bin/sp_relion2sphire.py' adding 'sphire/bin/sp_reproducibility.py' adding 'sphire/bin/sp_resample.py' adding 'sphire/bin/sp_rewindow.py' adding 'sphire/bin/sp_rot_sym.py' adding 'sphire/bin/sp_rsort3d.py' adding 'sphire/bin/sp_rviper.py' adding 'sphire/bin/sp_shiftali.py' adding 'sphire/bin/sp_signalsubtract.py' adding 'sphire/bin/sp_sort3d.py' adding 'sphire/bin/sp_sort3d_depth.py' adding 'sphire/bin/sp_sphire2relion.py' adding 'sphire/bin/sp_spliteigen.py' adding 'sphire/bin/sp_ssnr3d.py' adding 'sphire/bin/sp_stability.py' adding 'sphire/bin/sp_summovie.py' adding 'sphire/bin/sp_sx.py' adding 'sphire/bin/sp_transform2d.py' adding 'sphire/bin/sp_unblur.py' adding 'sphire/bin/sp_unblur_old.py' adding 'sphire/bin/sp_var.py' adding 'sphire/bin/sp_varimax.py' adding 'sphire/bin/sp_viper.py' adding 'sphire/bin/sp_window.py' adding 'sphire/libpy/__init__.py' adding 'sphire/libpy/sp_alignment.py' adding 'sphire/libpy/sp_applications.py' adding 'sphire/libpy/sp_ctf_refine_io.py' adding 'sphire/libpy/sp_ctf_refine_plotting.py' adding 'sphire/libpy/sp_development.py' adding 'sphire/libpy/sp_filter.py' adding 'sphire/libpy/sp_fundamentals.py' adding 'sphire/libpy/sp_global_def.py' adding 'sphire/libpy/sp_isac.py' adding 'sphire/libpy/sp_logger.py' adding 'sphire/libpy/sp_morphology.py' adding 'sphire/libpy/sp_multi_shc.py' adding 'sphire/libpy/sp_pixel_error.py' adding 'sphire/libpy/sp_projection.py' adding 'sphire/libpy/sp_reconstruction.py' adding 'sphire/libpy/sp_sparx.py' adding 'sphire/libpy/sp_statistics.py' adding 'sphire/libpy/sp_user_functions.py' adding 'sphire/libpy/sp_user_functions_meridien.py' adding 'sphire/libpy/sp_utilities.py' adding 'sphire/libpy/prior_calculation/__init__.py' adding 'sphire/libpy/prior_calculation/sp_helix_fundamentals.py' adding 'sphire/libpy/prior_calculation/sp_helix_lib.py' adding 'sphire/libpy/prior_calculation/sp_helix_prior.py' adding 'sphire/libpy/prior_calculation/sp_helix_relion.py' adding 'sphire/libpy/prior_calculation/sp_helix_sphire.py' adding 'sphire-1.4.2.dist-info/METADATA' adding 'sphire-1.4.2.dist-info/WHEEL' adding 'sphire-1.4.2.dist-info/entry_points.txt' adding 'sphire-1.4.2.dist-info/top_level.txt' adding 'sphire-1.4.2.dist-info/RECORD' removing build/bdist.linux-x86_64/wheel Building wheel for sphire (pyproject.toml): finished with status 'done' Created wheel for sphire: filename=sphire-1.4.2-py3-none-any.whl size=1596335 sha256=5f20e0551067ffdd5010a93f4734dfd442c5fe13dac628f85cc5a6cd71181d9e Stored in directory: /builddir/.cache/pip/wheels/bf/09/57/902ac950c8c86b5d9d67334ead41049d86ebc1b70fff642c04 Successfully built sphire + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.WVq2ua + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64 ++ dirname /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64 + cd sphire-1.4.2 ++ ls /builddir/build/BUILD/sphire-1.4.2/pyproject-wheeldir/sphire-1.4.2-py3-none-any.whl ++ sed -E 's/([^-]+)-([^-]+)-.+\.whl/\1==\2/' ++ xargs basename --multiple + specifier=sphire==1.4.2 + TMPDIR=/builddir/build/BUILD/sphire-1.4.2/.pyproject-builddir + /usr/bin/python3 -m pip install --root /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64 --no-deps --disable-pip-version-check --progress-bar off --verbose --ignore-installed --no-warn-script-location --no-index --no-cache-dir --find-links /builddir/build/BUILD/sphire-1.4.2/pyproject-wheeldir sphire==1.4.2 Using pip 22.0.4 from /usr/lib/python3.9/site-packages/pip (python 3.9) Looking in links: /builddir/build/BUILD/sphire-1.4.2/pyproject-wheeldir Processing ./pyproject-wheeldir/sphire-1.4.2-py3-none-any.whl Installing collected packages: sphire Creating /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin changing mode of /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_3dvariability.py to 755 changing mode of /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_ali2d.py to 755 changing mode of /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_ali2d_mref.py to 755 changing mode of /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_ali3d.py to 755 changing mode of /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_ali_vol.py to 755 changing mode of /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_auto.py to 755 changing mode of /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_ave_ali.py to 755 changing mode of /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_batch.py to 755 changing mode of /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_center_projections.py to 755 changing mode of /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_chains.py to 755 changing mode of /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_cinderella_pred.py to 755 changing mode of /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_compare2d.py to 755 changing mode of /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_compute_isac_avg.py to 755 changing mode of /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_consistency.py to 755 changing mode of /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_convert_relionnew_to_relionold.py to 755 changing mode of /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_copyfromtif.py to 755 changing mode of /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_cpy.py to 755 changing mode of /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_cryolo_boxmanager.py to 755 changing mode of /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_cryolo_predict.py to 755 changing mode of /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_cryolo_train.py to 755 changing mode of /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_cter.py to 755 changing mode of /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_ctf.py to 755 changing mode of /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_ctf_refine.py to 755 changing mode of /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_ctf_refine_selection.py to 755 changing mode of /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_eval_isac.py to 755 changing mode of /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_factcoords.py to 755 changing mode of /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_filrecons3d.py to 755 changing mode of /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_filterlocal.py to 755 changing mode of /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_find_struct.py to 755 changing mode of /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_fit_error.py to 755 changing mode of /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_genbuf.py to 755 changing mode of /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_gui.py to 755 changing mode of /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_gui_cter.py to 755 changing mode of /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_gui_meridien.py to 755 changing mode of /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_gui_unblur.py to 755 changing mode of /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_hac_averages.py to 755 changing mode of /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_hac_clustering.py to 755 changing mode of /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_header.py to 755 changing mode of /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_helical_demo.py to 755 changing mode of /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_helixboxer.py to 755 changing mode of /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_ihrsr.py to 755 changing mode of /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_imgstat.py to 755 changing mode of /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_isac2.py to 755 changing mode of /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_k_means.py to 755 changing mode of 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/builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_factcoords.py /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_filrecons3d.py /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_filterlocal.py /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_find_struct.py /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_fit_error.py /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_genbuf.py /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_gui.py /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_gui_cter.py /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_gui_meridien.py /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_gui_unblur.py /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_hac_averages.py /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_hac_clustering.py /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_header.py /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_helical_demo.py /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_helixboxer.py /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_ihrsr.py /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_imgstat.py /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_isac2.py /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_k_means.py /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_k_means_groups.py /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_k_means_stable.py /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_local_ali2d.py /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_local_ali3d.py /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_local_ali3dm.py /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_locres.py /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_mask.py /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_meridien.py /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_meridien_alpha.py /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_meridien_alpha2.py /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_meridien_beta.py /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_meridien_pre_things.py /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_meridien_sort.py /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_micrograh_selection.py 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/builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_sphire2relion.py: updating /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_spliteigen.py: updating /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_ssnr3d.py: updating /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_stability.py: updating /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_summovie.py: updating /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_sx.py: updating /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_transform2d.py: updating /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_unblur.py: updating /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_unblur_old.py: updating /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_var.py: updating /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_varimax.py: updating /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_viper.py: updating /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/sp_window.py: updating + rm -rfv /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin/__pycache__ + rm -f /builddir/build/BUILD/python-sphire-1.4.2-1.el9.x86_64-pyproject-ghost-distinfo + site_dirs=() + '[' -d /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/lib/python3.9/site-packages ']' + site_dirs+=("/usr/lib/python3.9/site-packages") + '[' /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/lib64/python3.9/site-packages '!=' /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/lib/python3.9/site-packages ']' + '[' -d /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/lib64/python3.9/site-packages ']' + for site_dir in ${site_dirs[@]} + for distinfo in /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64$site_dir/*.dist-info + echo '%ghost /usr/lib/python3.9/site-packages/sphire-1.4.2.dist-info' + sed -i s/pip/rpm/ /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/lib/python3.9/site-packages/sphire-1.4.2.dist-info/INSTALLER + PYTHONPATH=/usr/lib/rpm/redhat + /usr/bin/python3 -B /usr/lib/rpm/redhat/pyproject_preprocess_record.py --buildroot /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64 --record /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/lib/python3.9/site-packages/sphire-1.4.2.dist-info/RECORD --output /builddir/build/BUILD/python-sphire-1.4.2-1.el9.x86_64-pyproject-record + rm -fv /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/lib/python3.9/site-packages/sphire-1.4.2.dist-info/RECORD removed '/builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/lib/python3.9/site-packages/sphire-1.4.2.dist-info/RECORD' + rm -fv /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/lib/python3.9/site-packages/sphire-1.4.2.dist-info/REQUESTED removed '/builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/lib/python3.9/site-packages/sphire-1.4.2.dist-info/REQUESTED' ++ cut -f1 '-d ' ++ wc -l /builddir/build/BUILD/python-sphire-1.4.2-1.el9.x86_64-pyproject-ghost-distinfo + lines=1 + '[' 1 -ne 1 ']' + /usr/bin/python3 /usr/lib/rpm/redhat/pyproject_save_files.py --output-files /builddir/build/BUILD/python-sphire-1.4.2-1.el9.x86_64-pyproject-files --output-modules /builddir/build/BUILD/python-sphire-1.4.2-1.el9.x86_64-pyproject-modules --buildroot /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64 --sitelib /usr/lib/python3.9/site-packages --sitearch /usr/lib64/python3.9/site-packages --python-version 3.9 --pyproject-record /builddir/build/BUILD/python-sphire-1.4.2-1.el9.x86_64-pyproject-record --prefix /usr '*' +auto + /usr/lib/rpm/find-debuginfo.sh -j2 --strict-build-id -m -i --build-id-seed 1.4.2-1.el9 --unique-debug-suffix -1.4.2-1.el9.x86_64 --unique-debug-src-base python-sphire-1.4.2-1.el9.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/sphire-1.4.2 find: 'debug': No such file or directory + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 Bytecompiling .py files below /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/lib/python3.9 using python3.9 + /usr/lib/rpm/brp-python-hardlink + /usr/lib/rpm/redhat/brp-mangle-shebangs Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.6QcCFe + umask 022 + cd /builddir/build/BUILD + cd sphire-1.4.2 + '[' '!' -f /builddir/build/BUILD/python-sphire-1.4.2-1.el9.x86_64-pyproject-modules ']' + PATH=/builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/bin:/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin + PYTHONPATH=/builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/lib64/python3.9/site-packages:/builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/lib/python3.9/site-packages + _PYTHONSITE=/builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/lib64/python3.9/site-packages:/builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64/usr/lib/python3.9/site-packages + PYTHONDONTWRITEBYTECODE=1 + /usr/bin/python3 -s /usr/lib/rpm/redhat/import_all_modules.py -f /builddir/build/BUILD/python-sphire-1.4.2-1.el9.x86_64-pyproject-modules -t Check import: sphire + RPM_EC=0 ++ jobs -p + exit 0 Processing files: python3-sphire-1.4.2-1.el9.noarch Provides: python-sphire = 1.4.2-1.el9 python3-sphire = 1.4.2-1.el9 python3.9-sphire = 1.4.2-1.el9 python3.9dist(sphire) = 1.4.2 python3dist(sphire) = 1.4.2 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: /usr/bin/python3 python(abi) = 3.9 Obsoletes: python39-sphire < 1.4.2-1.el9 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64 Wrote: /builddir/build/SRPMS/python-sphire-1.4.2-1.el9.src.rpm Wrote: /builddir/build/RPMS/python3-sphire-1.4.2-1.el9.noarch.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.MGnLMh + umask 022 + cd /builddir/build/BUILD + cd sphire-1.4.2 + /usr/bin/rm -rf /builddir/build/BUILDROOT/python-sphire-1.4.2-1.el9.x86_64 + RPM_EC=0 ++ jobs -p + exit 0 Child return code was: 0