Mock Version: 3.5 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/python-pyhpo.spec'], chrootPath='/var/lib/mock/rhel+epel-9-x86_64-1681884429.259698/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1000gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.ym73hxvb:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueprintOutput=True) Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.ym73hxvb:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '6d3963dd0d2f4c8f8b6ff3a869334e5f', '-D', '/var/lib/mock/rhel+epel-9-x86_64-1681884429.259698/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.ym73hxvb:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/python-pyhpo.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1681862400 Wrote: /builddir/build/SRPMS/python-pyhpo-3.1.5-1.el9.src.rpm Child return code was: 0 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -br --target x86_64 --nodeps /builddir/build/SPECS/python-pyhpo.spec'], chrootPath='/var/lib/mock/rhel+epel-9-x86_64-1681884429.259698/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1000gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.ym73hxvb:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueraiseExc=FalseprintOutput=True) Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.ym73hxvb:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '1a63724ed1514401ac013e8cd893571b', '-D', '/var/lib/mock/rhel+epel-9-x86_64-1681884429.259698/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.ym73hxvb:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -br --target x86_64 --nodeps /builddir/build/SPECS/python-pyhpo.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1681862400 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.lKryPa + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf pyhpo-3.1.5 + /usr/bin/gzip -dc /builddir/build/SOURCES/pyhpo-3.1.5.tar.gz + /usr/bin/tar -xof - + STATUS=0 + '[' 0 -ne 0 ']' + cd pyhpo-3.1.5 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + RPM_EC=0 ++ jobs -p + exit 0 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.boABrJ + umask 022 + cd /builddir/build/BUILD + cd pyhpo-3.1.5 + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(pip) >= 19' + echo 'python3dist(packaging)' + '[' -f pyproject.toml ']' + '[' -f setup.py ']' + echo 'python3dist(setuptools) >= 40.8' + echo 'python3dist(wheel)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/pyhpo-3.1.5/.pyproject-builddir + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64-v2 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 ' + TMPDIR=/builddir/build/BUILD/pyhpo-3.1.5/.pyproject-builddir + RPM_TOXENV=py39 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/pyhpo-3.1.5/pyproject-wheeldir Handling setuptools >= 40.8 from default build backend Requirement satisfied: setuptools >= 40.8 (installed: setuptools 67.6.1) Handling wheel from default build backend Requirement not satisfied: wheel Exiting dependency generation pass: build backend + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/python-pyhpo-3.1.5-1.el9.buildreqs.nosrc.rpm Child return code was: 11 Dynamic buildrequires detected Going to install missing buildrequires. See root.log for details. ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -br --target x86_64 --nodeps /builddir/build/SPECS/python-pyhpo.spec'], chrootPath='/var/lib/mock/rhel+epel-9-x86_64-1681884429.259698/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1000gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.ym73hxvb:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueraiseExc=FalseprintOutput=True) Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.ym73hxvb:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '308113c4534e4f40aa83d7e38783d00b', '-D', '/var/lib/mock/rhel+epel-9-x86_64-1681884429.259698/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.ym73hxvb:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -br --target x86_64 --nodeps /builddir/build/SPECS/python-pyhpo.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1681862400 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.SoDK67 + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf pyhpo-3.1.5 + /usr/bin/gzip -dc /builddir/build/SOURCES/pyhpo-3.1.5.tar.gz + /usr/bin/tar -xof - + STATUS=0 + '[' 0 -ne 0 ']' + cd pyhpo-3.1.5 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + RPM_EC=0 ++ jobs -p + exit 0 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.s6fYPF + umask 022 + cd /builddir/build/BUILD + cd pyhpo-3.1.5 + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(pip) >= 19' + echo 'python3dist(packaging)' + '[' -f pyproject.toml ']' + '[' -f setup.py ']' + echo 'python3dist(setuptools) >= 40.8' + echo 'python3dist(wheel)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/pyhpo-3.1.5/.pyproject-builddir + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64-v2 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 ' + TMPDIR=/builddir/build/BUILD/pyhpo-3.1.5/.pyproject-builddir + RPM_TOXENV=py39 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/pyhpo-3.1.5/pyproject-wheeldir Handling setuptools >= 40.8 from default build backend Requirement satisfied: setuptools >= 40.8 (installed: setuptools 67.6.1) Handling wheel from default build backend Requirement satisfied: wheel (installed: wheel 0.36.2) HOOK STDOUT: running egg_info HOOK STDOUT: writing pyhpo.egg-info/PKG-INFO HOOK STDOUT: writing dependency_links to pyhpo.egg-info/dependency_links.txt HOOK STDOUT: writing requirements to pyhpo.egg-info/requires.txt HOOK STDOUT: writing top-level names to pyhpo.egg-info/top_level.txt HOOK STDOUT: reading manifest file 'pyhpo.egg-info/SOURCES.txt' HOOK STDOUT: reading manifest template 'MANIFEST.in' HOOK STDOUT: adding license file 'LICENSE' HOOK STDOUT: writing manifest file 'pyhpo.egg-info/SOURCES.txt' Handling wheel from get_requires_for_build_wheel Requirement satisfied: wheel (installed: wheel 0.36.2) Handling pydantic from hook generated metadata: Requires-Dist Requirement not satisfied: pydantic Handling backports.cached-property (==1.0.1) from hook generated metadata: Requires-Dist Requirement not satisfied: backports.cached-property (==1.0.1) Handling pandas ; extra == 'all' from hook generated metadata: Requires-Dist Ignoring alien requirement: pandas ; extra == 'all' Handling scipy ; extra == 'all' from hook generated metadata: Requires-Dist Ignoring alien requirement: scipy ; extra == 'all' Handling coverage ; extra == 'dev' from hook generated metadata: Requires-Dist Ignoring alien requirement: coverage ; extra == 'dev' Handling flake8 ; extra == 'dev' from hook generated metadata: Requires-Dist Ignoring alien requirement: flake8 ; extra == 'dev' Handling mypy ; extra == 'dev' from hook generated metadata: Requires-Dist Ignoring alien requirement: mypy ; extra == 'dev' Handling sphinx ; extra == 'dev' from hook generated metadata: Requires-Dist Ignoring alien requirement: sphinx ; extra == 'dev' Handling sphinx-rtd-theme ; extra == 'dev' from hook generated metadata: Requires-Dist Ignoring alien requirement: sphinx-rtd-theme ; extra == 'dev' Handling pandas ; extra == 'pandas' from hook generated metadata: Requires-Dist Ignoring alien requirement: pandas ; extra == 'pandas' Handling scipy ; extra == 'scipy' from hook generated metadata: Requires-Dist Ignoring alien requirement: scipy ; extra == 'scipy' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/python-pyhpo-3.1.5-1.el9.buildreqs.nosrc.rpm Child return code was: 11 Dynamic buildrequires detected Going to install missing buildrequires. See root.log for details. ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -br --target x86_64 --nodeps /builddir/build/SPECS/python-pyhpo.spec'], chrootPath='/var/lib/mock/rhel+epel-9-x86_64-1681884429.259698/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1000gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.ym73hxvb:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueraiseExc=FalseprintOutput=True) Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.ym73hxvb:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '3a5258a314ca428f9d5640e633f3ce6d', '-D', '/var/lib/mock/rhel+epel-9-x86_64-1681884429.259698/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.ym73hxvb:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -br --target x86_64 --nodeps /builddir/build/SPECS/python-pyhpo.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1681862400 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.N5tvxA + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf pyhpo-3.1.5 + /usr/bin/tar -xof - + /usr/bin/gzip -dc /builddir/build/SOURCES/pyhpo-3.1.5.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd pyhpo-3.1.5 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + RPM_EC=0 ++ jobs -p + exit 0 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.qo4vHq + umask 022 + cd /builddir/build/BUILD + cd pyhpo-3.1.5 + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(pip) >= 19' + echo 'python3dist(packaging)' + '[' -f pyproject.toml ']' + '[' -f setup.py ']' + echo 'python3dist(setuptools) >= 40.8' + echo 'python3dist(wheel)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/pyhpo-3.1.5/.pyproject-builddir + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64-v2 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 ' + TMPDIR=/builddir/build/BUILD/pyhpo-3.1.5/.pyproject-builddir + RPM_TOXENV=py39 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/pyhpo-3.1.5/pyproject-wheeldir Handling setuptools >= 40.8 from default build backend Requirement satisfied: setuptools >= 40.8 (installed: setuptools 67.6.1) Handling wheel from default build backend Requirement satisfied: wheel (installed: wheel 0.36.2) HOOK STDOUT: running egg_info HOOK STDOUT: writing pyhpo.egg-info/PKG-INFO HOOK STDOUT: writing dependency_links to pyhpo.egg-info/dependency_links.txt HOOK STDOUT: writing requirements to pyhpo.egg-info/requires.txt HOOK STDOUT: writing top-level names to pyhpo.egg-info/top_level.txt HOOK STDOUT: reading manifest file 'pyhpo.egg-info/SOURCES.txt' HOOK STDOUT: reading manifest template 'MANIFEST.in' HOOK STDOUT: adding license file 'LICENSE' HOOK STDOUT: writing manifest file 'pyhpo.egg-info/SOURCES.txt' Handling wheel from get_requires_for_build_wheel Requirement satisfied: wheel (installed: wheel 0.36.2) Handling pydantic from hook generated metadata: Requires-Dist Requirement satisfied: pydantic (installed: pydantic 1.10.7) Handling backports.cached-property (==1.0.1) from hook generated metadata: Requires-Dist Requirement satisfied: backports.cached-property (==1.0.1) (installed: backports.cached-property 1.0.1) Handling pandas ; extra == 'all' from hook generated metadata: Requires-Dist Ignoring alien requirement: pandas ; extra == 'all' Handling scipy ; extra == 'all' from hook generated metadata: Requires-Dist Ignoring alien requirement: scipy ; extra == 'all' Handling coverage ; extra == 'dev' from hook generated metadata: Requires-Dist Ignoring alien requirement: coverage ; extra == 'dev' Handling flake8 ; extra == 'dev' from hook generated metadata: Requires-Dist Ignoring alien requirement: flake8 ; extra == 'dev' Handling mypy ; extra == 'dev' from hook generated metadata: Requires-Dist Ignoring alien requirement: mypy ; extra == 'dev' Handling sphinx ; extra == 'dev' from hook generated metadata: Requires-Dist Ignoring alien requirement: sphinx ; extra == 'dev' Handling sphinx-rtd-theme ; extra == 'dev' from hook generated metadata: Requires-Dist Ignoring alien requirement: sphinx-rtd-theme ; extra == 'dev' Handling pandas ; extra == 'pandas' from hook generated metadata: Requires-Dist Ignoring alien requirement: pandas ; extra == 'pandas' Handling scipy ; extra == 'scipy' from hook generated metadata: Requires-Dist Ignoring alien requirement: scipy ; extra == 'scipy' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/python-pyhpo-3.1.5-1.el9.buildreqs.nosrc.rpm Child return code was: 11 Dynamic buildrequires detected Going to install missing buildrequires. See root.log for details. ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -ba --noprep --target x86_64 --nodeps /builddir/build/SPECS/python-pyhpo.spec'], chrootPath='/var/lib/mock/rhel+epel-9-x86_64-1681884429.259698/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1000gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.ym73hxvb:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueprintOutput=True) Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.ym73hxvb:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '8171489205e7480a9ceb0451b6451032', '-D', '/var/lib/mock/rhel+epel-9-x86_64-1681884429.259698/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.ym73hxvb:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -ba --noprep --target x86_64 --nodeps /builddir/build/SPECS/python-pyhpo.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1681862400 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.YSqpix + umask 022 + cd /builddir/build/BUILD + cd pyhpo-3.1.5 + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(pip) >= 19' + echo 'python3dist(packaging)' + '[' -f pyproject.toml ']' + '[' -f setup.py ']' + echo 'python3dist(setuptools) >= 40.8' + echo 'python3dist(wheel)' + rm -rfv pyhpo-3.1.5.dist-info/ removed 'pyhpo-3.1.5.dist-info/LICENSE' removed 'pyhpo-3.1.5.dist-info/METADATA' removed 'pyhpo-3.1.5.dist-info/top_level.txt' removed directory 'pyhpo-3.1.5.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/pyhpo-3.1.5/.pyproject-builddir + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64-v2 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 ' + TMPDIR=/builddir/build/BUILD/pyhpo-3.1.5/.pyproject-builddir + RPM_TOXENV=py39 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/pyhpo-3.1.5/pyproject-wheeldir Handling setuptools >= 40.8 from default build backend Requirement satisfied: setuptools >= 40.8 (installed: setuptools 67.6.1) Handling wheel from default build backend Requirement satisfied: wheel (installed: wheel 0.36.2) HOOK STDOUT: running egg_info HOOK STDOUT: writing pyhpo.egg-info/PKG-INFO HOOK STDOUT: writing dependency_links to pyhpo.egg-info/dependency_links.txt HOOK STDOUT: writing requirements to pyhpo.egg-info/requires.txt HOOK STDOUT: writing top-level names to pyhpo.egg-info/top_level.txt HOOK STDOUT: reading manifest file 'pyhpo.egg-info/SOURCES.txt' HOOK STDOUT: reading manifest template 'MANIFEST.in' HOOK STDOUT: adding license file 'LICENSE' HOOK STDOUT: writing manifest file 'pyhpo.egg-info/SOURCES.txt' Handling wheel from get_requires_for_build_wheel Requirement satisfied: wheel (installed: wheel 0.36.2) Handling pydantic from hook generated metadata: Requires-Dist Requirement satisfied: pydantic (installed: pydantic 1.10.7) Handling backports.cached-property (==1.0.1) from hook generated metadata: Requires-Dist Requirement satisfied: backports.cached-property (==1.0.1) (installed: backports.cached-property 1.0.1) Handling pandas ; extra == 'all' from hook generated metadata: Requires-Dist Ignoring alien requirement: pandas ; extra == 'all' Handling scipy ; extra == 'all' from hook generated metadata: Requires-Dist Ignoring alien requirement: scipy ; extra == 'all' Handling coverage ; extra == 'dev' from hook generated metadata: Requires-Dist Ignoring alien requirement: coverage ; extra == 'dev' Handling flake8 ; extra == 'dev' from hook generated metadata: Requires-Dist Ignoring alien requirement: flake8 ; extra == 'dev' Handling mypy ; extra == 'dev' from hook generated metadata: Requires-Dist Ignoring alien requirement: mypy ; extra == 'dev' Handling sphinx ; extra == 'dev' from hook generated metadata: Requires-Dist Ignoring alien requirement: sphinx ; extra == 'dev' Handling sphinx-rtd-theme ; extra == 'dev' from hook generated metadata: Requires-Dist Ignoring alien requirement: sphinx-rtd-theme ; extra == 'dev' Handling pandas ; extra == 'pandas' from hook generated metadata: Requires-Dist Ignoring alien requirement: pandas ; extra == 'pandas' Handling scipy ; extra == 'scipy' from hook generated metadata: Requires-Dist Ignoring alien requirement: scipy ; extra == 'scipy' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.SHt7uL + umask 022 + cd /builddir/build/BUILD + cd pyhpo-3.1.5 + mkdir -p /builddir/build/BUILD/pyhpo-3.1.5/.pyproject-builddir + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64-v2 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 ' + TMPDIR=/builddir/build/BUILD/pyhpo-3.1.5/.pyproject-builddir + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_wheel.py /builddir/build/BUILD/pyhpo-3.1.5/pyproject-wheeldir Processing /builddir/build/BUILD/pyhpo-3.1.5 Preparing metadata (pyproject.toml): started Running command Preparing metadata (pyproject.toml) running dist_info creating /builddir/build/BUILD/pyhpo-3.1.5/.pyproject-builddir/pip-modern-metadata-kt5la28w/pyhpo.egg-info writing /builddir/build/BUILD/pyhpo-3.1.5/.pyproject-builddir/pip-modern-metadata-kt5la28w/pyhpo.egg-info/PKG-INFO writing dependency_links to /builddir/build/BUILD/pyhpo-3.1.5/.pyproject-builddir/pip-modern-metadata-kt5la28w/pyhpo.egg-info/dependency_links.txt writing requirements to /builddir/build/BUILD/pyhpo-3.1.5/.pyproject-builddir/pip-modern-metadata-kt5la28w/pyhpo.egg-info/requires.txt writing top-level names to /builddir/build/BUILD/pyhpo-3.1.5/.pyproject-builddir/pip-modern-metadata-kt5la28w/pyhpo.egg-info/top_level.txt writing manifest file '/builddir/build/BUILD/pyhpo-3.1.5/.pyproject-builddir/pip-modern-metadata-kt5la28w/pyhpo.egg-info/SOURCES.txt' reading manifest file '/builddir/build/BUILD/pyhpo-3.1.5/.pyproject-builddir/pip-modern-metadata-kt5la28w/pyhpo.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE' writing manifest file '/builddir/build/BUILD/pyhpo-3.1.5/.pyproject-builddir/pip-modern-metadata-kt5la28w/pyhpo.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/pyhpo-3.1.5/.pyproject-builddir/pip-modern-metadata-kt5la28w/pyhpo-3.1.5.dist-info' adding license file "LICENSE" (matched pattern "LICENSE") Preparing metadata (pyproject.toml): finished with status 'done' Building wheels for collected packages: pyhpo Building wheel for pyhpo (pyproject.toml): started Running command Building wheel for pyhpo (pyproject.toml) running bdist_wheel running build running build_py creating build creating build/lib creating build/lib/pyhpo copying pyhpo/update_data.py -> build/lib/pyhpo copying pyhpo/term.py -> build/lib/pyhpo copying pyhpo/stats.py -> build/lib/pyhpo copying pyhpo/set.py -> build/lib/pyhpo copying pyhpo/ontology.py -> build/lib/pyhpo copying pyhpo/matrix.py -> build/lib/pyhpo copying pyhpo/config.py -> build/lib/pyhpo copying pyhpo/annotations.py -> build/lib/pyhpo copying pyhpo/__init__.py -> build/lib/pyhpo creating build/lib/pyhpo/similarity copying pyhpo/similarity/defaults.py -> build/lib/pyhpo/similarity copying pyhpo/similarity/base.py -> build/lib/pyhpo/similarity copying pyhpo/similarity/__init__.py -> build/lib/pyhpo/similarity creating build/lib/pyhpo/parser copying pyhpo/parser/obo.py -> build/lib/pyhpo/parser copying pyhpo/parser/genes.py -> build/lib/pyhpo/parser copying pyhpo/parser/generics.py -> build/lib/pyhpo/parser copying pyhpo/parser/diseases.py -> build/lib/pyhpo/parser copying pyhpo/parser/__init__.py -> build/lib/pyhpo/parser running egg_info writing pyhpo.egg-info/PKG-INFO writing dependency_links to pyhpo.egg-info/dependency_links.txt writing requirements to pyhpo.egg-info/requires.txt writing top-level names to pyhpo.egg-info/top_level.txt reading manifest file 'pyhpo.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE' writing manifest file 'pyhpo.egg-info/SOURCES.txt' /usr/lib/python3.9/site-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'pyhpo.data' as data is deprecated, please list it in `packages`. !! ############################ # Package would be ignored # ############################ Python recognizes 'pyhpo.data' as an importable package, but it is not listed in the `packages` configuration of setuptools. 'pyhpo.data' has been automatically added to the distribution only because it may contain data files, but this behavior is likely to change in future versions of setuptools (and therefore is considered deprecated). Please make sure that 'pyhpo.data' is included as a package by using the `packages` configuration field or the proper discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" and "data files" on setuptools documentation page. !! check.warn(importable) creating build/lib/pyhpo/data copying pyhpo/data/hp.obo -> build/lib/pyhpo/data copying pyhpo/data/phenotype.hpoa -> build/lib/pyhpo/data copying pyhpo/data/phenotype_to_genes.txt -> build/lib/pyhpo/data installing to build/bdist.linux-x86_64/wheel running install running install_lib creating build/bdist.linux-x86_64 creating build/bdist.linux-x86_64/wheel creating build/bdist.linux-x86_64/wheel/pyhpo creating build/bdist.linux-x86_64/wheel/pyhpo/data copying build/lib/pyhpo/data/phenotype_to_genes.txt -> build/bdist.linux-x86_64/wheel/pyhpo/data copying build/lib/pyhpo/data/phenotype.hpoa -> build/bdist.linux-x86_64/wheel/pyhpo/data copying build/lib/pyhpo/data/hp.obo -> build/bdist.linux-x86_64/wheel/pyhpo/data creating build/bdist.linux-x86_64/wheel/pyhpo/parser copying build/lib/pyhpo/parser/__init__.py -> build/bdist.linux-x86_64/wheel/pyhpo/parser copying build/lib/pyhpo/parser/diseases.py -> build/bdist.linux-x86_64/wheel/pyhpo/parser copying build/lib/pyhpo/parser/generics.py -> build/bdist.linux-x86_64/wheel/pyhpo/parser copying build/lib/pyhpo/parser/genes.py -> build/bdist.linux-x86_64/wheel/pyhpo/parser copying build/lib/pyhpo/parser/obo.py -> build/bdist.linux-x86_64/wheel/pyhpo/parser creating build/bdist.linux-x86_64/wheel/pyhpo/similarity copying build/lib/pyhpo/similarity/__init__.py -> build/bdist.linux-x86_64/wheel/pyhpo/similarity copying build/lib/pyhpo/similarity/base.py -> build/bdist.linux-x86_64/wheel/pyhpo/similarity copying build/lib/pyhpo/similarity/defaults.py -> build/bdist.linux-x86_64/wheel/pyhpo/similarity copying build/lib/pyhpo/__init__.py -> build/bdist.linux-x86_64/wheel/pyhpo copying build/lib/pyhpo/annotations.py -> build/bdist.linux-x86_64/wheel/pyhpo copying build/lib/pyhpo/config.py -> build/bdist.linux-x86_64/wheel/pyhpo copying build/lib/pyhpo/matrix.py -> build/bdist.linux-x86_64/wheel/pyhpo copying build/lib/pyhpo/ontology.py -> build/bdist.linux-x86_64/wheel/pyhpo copying build/lib/pyhpo/set.py -> build/bdist.linux-x86_64/wheel/pyhpo copying build/lib/pyhpo/stats.py -> build/bdist.linux-x86_64/wheel/pyhpo copying build/lib/pyhpo/term.py -> build/bdist.linux-x86_64/wheel/pyhpo copying build/lib/pyhpo/update_data.py -> build/bdist.linux-x86_64/wheel/pyhpo running install_egg_info Copying pyhpo.egg-info to build/bdist.linux-x86_64/wheel/pyhpo-3.1.5-py3.9.egg-info running install_scripts adding license file "LICENSE" (matched pattern "LICENSE") creating build/bdist.linux-x86_64/wheel/pyhpo-3.1.5.dist-info/WHEEL creating '/builddir/build/BUILD/pyhpo-3.1.5/.pyproject-builddir/pip-wheel-dxlmxlr4/.tmp-yoy19q13/pyhpo-3.1.5-py3-none-any.whl' and adding 'build/bdist.linux-x86_64/wheel' to it adding 'pyhpo/__init__.py' adding 'pyhpo/annotations.py' adding 'pyhpo/config.py' adding 'pyhpo/matrix.py' adding 'pyhpo/ontology.py' adding 'pyhpo/set.py' adding 'pyhpo/stats.py' adding 'pyhpo/term.py' adding 'pyhpo/update_data.py' adding 'pyhpo/data/hp.obo' adding 'pyhpo/data/phenotype.hpoa' adding 'pyhpo/data/phenotype_to_genes.txt' adding 'pyhpo/parser/__init__.py' adding 'pyhpo/parser/diseases.py' adding 'pyhpo/parser/generics.py' adding 'pyhpo/parser/genes.py' adding 'pyhpo/parser/obo.py' adding 'pyhpo/similarity/__init__.py' adding 'pyhpo/similarity/base.py' adding 'pyhpo/similarity/defaults.py' adding 'pyhpo-3.1.5.dist-info/LICENSE' adding 'pyhpo-3.1.5.dist-info/METADATA' adding 'pyhpo-3.1.5.dist-info/WHEEL' adding 'pyhpo-3.1.5.dist-info/top_level.txt' adding 'pyhpo-3.1.5.dist-info/RECORD' removing build/bdist.linux-x86_64/wheel Building wheel for pyhpo (pyproject.toml): finished with status 'done' Created wheel for pyhpo: filename=pyhpo-3.1.5-py3-none-any.whl size=9299504 sha256=31409157c812ad0f93115b2648b2670ba7b9b2e1d7c7180f95d412161a2b6301 Stored in directory: /builddir/.cache/pip/wheels/35/84/42/7c82fd61d8b2047327773fc0442c573a38c24f50f472be96bc Successfully built pyhpo + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.hlp3Lw + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/python-pyhpo-3.1.5-1.el9.x86_64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/python-pyhpo-3.1.5-1.el9.x86_64 ++ dirname /builddir/build/BUILDROOT/python-pyhpo-3.1.5-1.el9.x86_64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/python-pyhpo-3.1.5-1.el9.x86_64 + cd pyhpo-3.1.5 ++ ls /builddir/build/BUILD/pyhpo-3.1.5/pyproject-wheeldir/pyhpo-3.1.5-py3-none-any.whl ++ xargs basename --multiple ++ sed -E 's/([^-]+)-([^-]+)-.+\.whl/\1==\2/' + specifier=pyhpo==3.1.5 + TMPDIR=/builddir/build/BUILD/pyhpo-3.1.5/.pyproject-builddir + /usr/bin/python3 -m pip install --root /builddir/build/BUILDROOT/python-pyhpo-3.1.5-1.el9.x86_64 --prefix /usr --no-deps --disable-pip-version-check --progress-bar off --verbose --ignore-installed --no-warn-script-location --no-index --no-cache-dir --find-links /builddir/build/BUILD/pyhpo-3.1.5/pyproject-wheeldir pyhpo==3.1.5 Using pip 22.0.4 from /usr/lib/python3.9/site-packages/pip (python 3.9) Looking in links: /builddir/build/BUILD/pyhpo-3.1.5/pyproject-wheeldir Processing ./pyproject-wheeldir/pyhpo-3.1.5-py3-none-any.whl Installing collected packages: pyhpo Successfully installed pyhpo-3.1.5 + '[' -d /builddir/build/BUILDROOT/python-pyhpo-3.1.5-1.el9.x86_64/usr/bin ']' + rm -f /builddir/build/BUILD/python-pyhpo-3.1.5-1.el9.x86_64-pyproject-ghost-distinfo + site_dirs=() + '[' -d /builddir/build/BUILDROOT/python-pyhpo-3.1.5-1.el9.x86_64/usr/lib/python3.9/site-packages ']' + site_dirs+=("/usr/lib/python3.9/site-packages") + '[' /builddir/build/BUILDROOT/python-pyhpo-3.1.5-1.el9.x86_64/usr/lib64/python3.9/site-packages '!=' /builddir/build/BUILDROOT/python-pyhpo-3.1.5-1.el9.x86_64/usr/lib/python3.9/site-packages ']' + '[' -d /builddir/build/BUILDROOT/python-pyhpo-3.1.5-1.el9.x86_64/usr/lib64/python3.9/site-packages ']' + for site_dir in ${site_dirs[@]} + for distinfo in /builddir/build/BUILDROOT/python-pyhpo-3.1.5-1.el9.x86_64$site_dir/*.dist-info + echo '%ghost /usr/lib/python3.9/site-packages/pyhpo-3.1.5.dist-info' + sed -i s/pip/rpm/ /builddir/build/BUILDROOT/python-pyhpo-3.1.5-1.el9.x86_64/usr/lib/python3.9/site-packages/pyhpo-3.1.5.dist-info/INSTALLER + PYTHONPATH=/usr/lib/rpm/redhat + /usr/bin/python3 -B /usr/lib/rpm/redhat/pyproject_preprocess_record.py --buildroot /builddir/build/BUILDROOT/python-pyhpo-3.1.5-1.el9.x86_64 --record /builddir/build/BUILDROOT/python-pyhpo-3.1.5-1.el9.x86_64/usr/lib/python3.9/site-packages/pyhpo-3.1.5.dist-info/RECORD --output /builddir/build/BUILD/python-pyhpo-3.1.5-1.el9.x86_64-pyproject-record + rm -fv /builddir/build/BUILDROOT/python-pyhpo-3.1.5-1.el9.x86_64/usr/lib/python3.9/site-packages/pyhpo-3.1.5.dist-info/RECORD removed '/builddir/build/BUILDROOT/python-pyhpo-3.1.5-1.el9.x86_64/usr/lib/python3.9/site-packages/pyhpo-3.1.5.dist-info/RECORD' + rm -fv /builddir/build/BUILDROOT/python-pyhpo-3.1.5-1.el9.x86_64/usr/lib/python3.9/site-packages/pyhpo-3.1.5.dist-info/REQUESTED removed '/builddir/build/BUILDROOT/python-pyhpo-3.1.5-1.el9.x86_64/usr/lib/python3.9/site-packages/pyhpo-3.1.5.dist-info/REQUESTED' ++ wc -l /builddir/build/BUILD/python-pyhpo-3.1.5-1.el9.x86_64-pyproject-ghost-distinfo ++ cut -f1 '-d ' + lines=1 + '[' 1 -ne 1 ']' + /usr/bin/python3 /usr/lib/rpm/redhat/pyproject_save_files.py --output-files /builddir/build/BUILD/python-pyhpo-3.1.5-1.el9.x86_64-pyproject-files --output-modules /builddir/build/BUILD/python-pyhpo-3.1.5-1.el9.x86_64-pyproject-modules --buildroot /builddir/build/BUILDROOT/python-pyhpo-3.1.5-1.el9.x86_64 --sitelib /usr/lib/python3.9/site-packages --sitearch /usr/lib64/python3.9/site-packages --python-version 3.9 --pyproject-record /builddir/build/BUILD/python-pyhpo-3.1.5-1.el9.x86_64-pyproject-record --prefix /usr '*' +auto + /usr/lib/rpm/find-debuginfo.sh -j2 --strict-build-id -m -i --build-id-seed 3.1.5-1.el9 --unique-debug-suffix -3.1.5-1.el9.x86_64 --unique-debug-src-base python-pyhpo-3.1.5-1.el9.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 --remove-section .gnu.build.attributes -S debugsourcefiles.list /builddir/build/BUILD/pyhpo-3.1.5 find: 'debug': No such file or directory + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 Bytecompiling .py files below /builddir/build/BUILDROOT/python-pyhpo-3.1.5-1.el9.x86_64/usr/lib/python3.9 using python3.9 + /usr/lib/rpm/brp-python-hardlink + /usr/lib/rpm/redhat/brp-mangle-shebangs Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.I8lA9o + umask 022 + cd /builddir/build/BUILD + cd pyhpo-3.1.5 + '[' '!' -f /builddir/build/BUILD/python-pyhpo-3.1.5-1.el9.x86_64-pyproject-modules ']' + PATH=/builddir/build/BUILDROOT/python-pyhpo-3.1.5-1.el9.x86_64/usr/bin:/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin + PYTHONPATH=/builddir/build/BUILDROOT/python-pyhpo-3.1.5-1.el9.x86_64/usr/lib64/python3.9/site-packages:/builddir/build/BUILDROOT/python-pyhpo-3.1.5-1.el9.x86_64/usr/lib/python3.9/site-packages + _PYTHONSITE=/builddir/build/BUILDROOT/python-pyhpo-3.1.5-1.el9.x86_64/usr/lib64/python3.9/site-packages:/builddir/build/BUILDROOT/python-pyhpo-3.1.5-1.el9.x86_64/usr/lib/python3.9/site-packages + PYTHONDONTWRITEBYTECODE=1 + /usr/bin/python3 -s /usr/lib/rpm/redhat/import_all_modules.py -f /builddir/build/BUILD/python-pyhpo-3.1.5-1.el9.x86_64-pyproject-modules -t Check import: pyhpo /builddir/build/BUILDROOT/python-pyhpo-3.1.5-1.el9.x86_64/usr/lib/python3.9/site-packages/pyhpo/ontology.py:9: UserWarning: Some functionality requires pandas, which is currently not available warnings.warn( + RPM_EC=0 ++ jobs -p + exit 0 Processing files: python3-pyhpo-3.1.5-1.el9.noarch Provides: python-pyhpo = 3.1.5-1.el9 python3-pyhpo = 3.1.5-1.el9 python3.9-pyhpo = 3.1.5-1.el9 python3.9dist(pyhpo) = 3.1.5 python3dist(pyhpo) = 3.1.5 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: python(abi) = 3.9 python3.9dist(backports-cached-property) = 1.0.1 python3.9dist(pydantic) Obsoletes: python39-pyhpo < 3.1.5-1.el9 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/python-pyhpo-3.1.5-1.el9.x86_64 Wrote: /builddir/build/SRPMS/python-pyhpo-3.1.5-1.el9.src.rpm Wrote: /builddir/build/RPMS/python3-pyhpo-3.1.5-1.el9.noarch.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.7KdvmV + umask 022 + cd /builddir/build/BUILD + cd pyhpo-3.1.5 + /usr/bin/rm -rf /builddir/build/BUILDROOT/python-pyhpo-3.1.5-1.el9.x86_64 + RPM_EC=0 ++ jobs -p + exit 0 Child return code was: 0