Mock Version: 2.15 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/python-pynnotator.spec'], chrootPath='/var/lib/mock/fedora-rawhide-x86_64-1641094622.718883/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1000gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.lvb2lzsm:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueprintOutput=True) Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.lvb2lzsm:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '031e90e2bf50446e9c62c18d325e460d', '-D', '/var/lib/mock/fedora-rawhide-x86_64-1641094622.718883/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.lvb2lzsm:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/python-pynnotator.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0'} and shell False Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1640908800 Wrote: /builddir/build/SRPMS/python-pynnotator-2.0-1.fc36.src.rpm Child return code was: 0 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -br --target x86_64 --nodeps /builddir/build/SPECS/python-pynnotator.spec'], chrootPath='/var/lib/mock/fedora-rawhide-x86_64-1641094622.718883/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1000gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.lvb2lzsm:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueraiseExc=FalseprintOutput=True) Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.lvb2lzsm:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '47148fe264f24f64a74001e5896912a5', '-D', '/var/lib/mock/fedora-rawhide-x86_64-1641094622.718883/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.lvb2lzsm:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -br --target x86_64 --nodeps /builddir/build/SPECS/python-pynnotator.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0'} and shell False Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1640908800 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.uczY90 + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf pynnotator-2.0 + /usr/bin/tar -xof - + /usr/bin/gzip -dc /builddir/build/SOURCES/pynnotator-2.0.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd pynnotator-2.0 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + RPM_EC=0 ++ jobs -p + exit 0 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.tVdKkr + umask 022 + cd /builddir/build/BUILD + cd pynnotator-2.0 + echo python3-devel + echo 'python3dist(pip) >= 19' + echo 'python3dist(packaging)' + '[' -f pyproject.toml ']' + '[' -f setup.py ']' + echo 'python3dist(setuptools) >= 40.8' + echo 'python3dist(wheel)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + RPM_TOXENV=py310 + HOSTNAME=rpmbuild + /usr/bin/python3 -s /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 -r Handling setuptools >= 40.8 from default build backend Requirement not satisfied: setuptools >= 40.8 Handling wheel from default build backend Requirement not satisfied: wheel Exiting dependency generation pass: build backend + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/python-pynnotator-2.0-1.fc36.buildreqs.nosrc.rpm Child return code was: 11 Dynamic buildrequires detected Going to install missing buildrequires. See root.log for details. ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -br --target x86_64 --nodeps /builddir/build/SPECS/python-pynnotator.spec'], chrootPath='/var/lib/mock/fedora-rawhide-x86_64-1641094622.718883/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1000gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.lvb2lzsm:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueraiseExc=FalseprintOutput=True) Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.lvb2lzsm:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', 'b1e86ffddd1143c3bfaf62d0a6146738', '-D', '/var/lib/mock/fedora-rawhide-x86_64-1641094622.718883/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.lvb2lzsm:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -br --target x86_64 --nodeps /builddir/build/SPECS/python-pynnotator.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0'} and shell False Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1640908800 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.QJ8tdQ + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf pynnotator-2.0 + /usr/bin/gzip -dc /builddir/build/SOURCES/pynnotator-2.0.tar.gz + /usr/bin/tar -xof - + STATUS=0 + '[' 0 -ne 0 ']' + cd pynnotator-2.0 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + RPM_EC=0 ++ jobs -p + exit 0 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.8j2DNI + umask 022 + cd /builddir/build/BUILD + cd pynnotator-2.0 + echo python3-devel + echo 'python3dist(pip) >= 19' + echo 'python3dist(packaging)' + '[' -f pyproject.toml ']' + '[' -f setup.py ']' + echo 'python3dist(setuptools) >= 40.8' + echo 'python3dist(wheel)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + RPM_TOXENV=py310 + HOSTNAME=rpmbuild + /usr/bin/python3 -s /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 -r Handling setuptools >= 40.8 from default build backend Requirement satisfied: setuptools >= 40.8 (installed: setuptools 59.6.0) Handling wheel from default build backend Requirement satisfied: wheel (installed: wheel 0.37.0) package init file 'pynnotator/tests/__init__.py' not found (or not a regular file) warning: no files found matching 'README.rst' warning: no files found matching 'docs/*.txt' warning: no files found matching 'pynnotator/tests/annotation.validated.vcf.gz' HOOK STDOUT: running egg_info HOOK STDOUT: writing pynnotator.egg-info/PKG-INFO HOOK STDOUT: writing dependency_links to pynnotator.egg-info/dependency_links.txt HOOK STDOUT: writing entry points to pynnotator.egg-info/entry_points.txt HOOK STDOUT: writing requirements to pynnotator.egg-info/requires.txt HOOK STDOUT: writing top-level names to pynnotator.egg-info/top_level.txt HOOK STDOUT: reading manifest file 'pynnotator.egg-info/SOURCES.txt' HOOK STDOUT: reading manifest template 'MANIFEST.in' HOOK STDOUT: writing manifest file 'pynnotator.egg-info/SOURCES.txt' Handling wheel from get_requires_for_build_wheel Requirement satisfied: wheel (installed: wheel 0.37.0) package init file 'pynnotator/tests/__init__.py' not found (or not a regular file) warning: no files found matching 'README.rst' warning: no files found matching 'docs/*.txt' warning: no files found matching 'pynnotator/tests/annotation.validated.vcf.gz' HOOK STDOUT: running dist_info HOOK STDOUT: writing pynnotator.egg-info/PKG-INFO HOOK STDOUT: writing dependency_links to pynnotator.egg-info/dependency_links.txt HOOK STDOUT: writing entry points to pynnotator.egg-info/entry_points.txt HOOK STDOUT: writing requirements to pynnotator.egg-info/requires.txt HOOK STDOUT: writing top-level names to pynnotator.egg-info/top_level.txt HOOK STDOUT: reading manifest file 'pynnotator.egg-info/SOURCES.txt' HOOK STDOUT: reading manifest template 'MANIFEST.in' HOOK STDOUT: writing manifest file 'pynnotator.egg-info/SOURCES.txt' HOOK STDOUT: creating '/builddir/build/BUILD/pynnotator-2.0/pynnotator.dist-info' Handling wheel from wheel metadata: Requires-Dist Requirement satisfied: wheel (installed: wheel 0.37.0) Handling pysam from wheel metadata: Requires-Dist Requirement not satisfied: pysam Handling cython from wheel metadata: Requires-Dist Requirement not satisfied: cython Handling distro from wheel metadata: Requires-Dist Requirement not satisfied: distro + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/python-pynnotator-2.0-1.fc36.buildreqs.nosrc.rpm Child return code was: 11 Dynamic buildrequires detected Going to install missing buildrequires. See root.log for details. ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -br --target x86_64 --nodeps /builddir/build/SPECS/python-pynnotator.spec'], chrootPath='/var/lib/mock/fedora-rawhide-x86_64-1641094622.718883/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1000gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.lvb2lzsm:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueraiseExc=FalseprintOutput=True) Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.lvb2lzsm:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', 'ac43dfb263954870848e8cb310f53891', '-D', '/var/lib/mock/fedora-rawhide-x86_64-1641094622.718883/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.lvb2lzsm:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -br --target x86_64 --nodeps /builddir/build/SPECS/python-pynnotator.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0'} and shell False Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1640908800 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.A4Dys2 + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf pynnotator-2.0 + /usr/bin/gzip -dc /builddir/build/SOURCES/pynnotator-2.0.tar.gz + /usr/bin/tar -xof - + STATUS=0 + '[' 0 -ne 0 ']' + cd pynnotator-2.0 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + RPM_EC=0 ++ jobs -p + exit 0 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.GHOPtN + umask 022 + cd /builddir/build/BUILD + cd pynnotator-2.0 + echo python3-devel + echo 'python3dist(pip) >= 19' + echo 'python3dist(packaging)' + '[' -f pyproject.toml ']' + '[' -f setup.py ']' + echo 'python3dist(setuptools) >= 40.8' + echo 'python3dist(wheel)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + RPM_TOXENV=py310 + HOSTNAME=rpmbuild + /usr/bin/python3 -s /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 -r Handling setuptools >= 40.8 from default build backend Requirement satisfied: setuptools >= 40.8 (installed: setuptools 59.6.0) Handling wheel from default build backend Requirement satisfied: wheel (installed: wheel 0.37.0) package init file 'pynnotator/tests/__init__.py' not found (or not a regular file) warning: no files found matching 'README.rst' warning: no files found matching 'docs/*.txt' warning: no files found matching 'pynnotator/tests/annotation.validated.vcf.gz' HOOK STDOUT: running egg_info HOOK STDOUT: writing pynnotator.egg-info/PKG-INFO HOOK STDOUT: writing dependency_links to pynnotator.egg-info/dependency_links.txt HOOK STDOUT: writing entry points to pynnotator.egg-info/entry_points.txt HOOK STDOUT: writing requirements to pynnotator.egg-info/requires.txt HOOK STDOUT: writing top-level names to pynnotator.egg-info/top_level.txt HOOK STDOUT: reading manifest file 'pynnotator.egg-info/SOURCES.txt' HOOK STDOUT: reading manifest template 'MANIFEST.in' HOOK STDOUT: writing manifest file 'pynnotator.egg-info/SOURCES.txt' Handling wheel from get_requires_for_build_wheel Requirement satisfied: wheel (installed: wheel 0.37.0) package init file 'pynnotator/tests/__init__.py' not found (or not a regular file) warning: no files found matching 'README.rst' warning: no files found matching 'docs/*.txt' warning: no files found matching 'pynnotator/tests/annotation.validated.vcf.gz' HOOK STDOUT: running dist_info HOOK STDOUT: writing pynnotator.egg-info/PKG-INFO HOOK STDOUT: writing dependency_links to pynnotator.egg-info/dependency_links.txt HOOK STDOUT: writing entry points to pynnotator.egg-info/entry_points.txt HOOK STDOUT: writing requirements to pynnotator.egg-info/requires.txt HOOK STDOUT: writing top-level names to pynnotator.egg-info/top_level.txt HOOK STDOUT: reading manifest file 'pynnotator.egg-info/SOURCES.txt' HOOK STDOUT: reading manifest template 'MANIFEST.in' HOOK STDOUT: writing manifest file 'pynnotator.egg-info/SOURCES.txt' HOOK STDOUT: creating '/builddir/build/BUILD/pynnotator-2.0/pynnotator.dist-info' Handling wheel from wheel metadata: Requires-Dist Requirement satisfied: wheel (installed: wheel 0.37.0) Handling pysam from wheel metadata: Requires-Dist Requirement satisfied: pysam (installed: pysam 0.18.0) Handling cython from wheel metadata: Requires-Dist Requirement satisfied: cython (installed: cython 0.29.24) Handling distro from wheel metadata: Requires-Dist Requirement satisfied: distro (installed: distro 1.6.0) + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/python-pynnotator-2.0-1.fc36.buildreqs.nosrc.rpm Child return code was: 11 Dynamic buildrequires detected Going to install missing buildrequires. See root.log for details. ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -ba --noprep --target x86_64 --nodeps /builddir/build/SPECS/python-pynnotator.spec'], chrootPath='/var/lib/mock/fedora-rawhide-x86_64-1641094622.718883/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1000gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.lvb2lzsm:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueprintOutput=True) Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.lvb2lzsm:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '4c2e3f60e07f46f4bc8f50ceaf5f3c33', '-D', '/var/lib/mock/fedora-rawhide-x86_64-1641094622.718883/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.lvb2lzsm:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -ba --noprep --target x86_64 --nodeps /builddir/build/SPECS/python-pynnotator.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0'} and shell False Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1640908800 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.tN9bMo + umask 022 + cd /builddir/build/BUILD + cd pynnotator-2.0 + echo python3-devel + echo 'python3dist(pip) >= 19' + echo 'python3dist(packaging)' + '[' -f pyproject.toml ']' + '[' -f setup.py ']' + echo 'python3dist(setuptools) >= 40.8' + echo 'python3dist(wheel)' + rm -rfv pynnotator.dist-info/ removed 'pynnotator.dist-info/METADATA' removed 'pynnotator.dist-info/entry_points.txt' removed 'pynnotator.dist-info/top_level.txt' removed directory 'pynnotator.dist-info/' + '[' -f /usr/bin/python3 ']' + RPM_TOXENV=py310 + HOSTNAME=rpmbuild + /usr/bin/python3 -s /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 -r Handling setuptools >= 40.8 from default build backend Requirement satisfied: setuptools >= 40.8 (installed: setuptools 59.6.0) Handling wheel from default build backend Requirement satisfied: wheel (installed: wheel 0.37.0) package init file 'pynnotator/tests/__init__.py' not found (or not a regular file) warning: no files found matching 'README.rst' warning: no files found matching 'docs/*.txt' warning: no files found matching 'pynnotator/tests/annotation.validated.vcf.gz' HOOK STDOUT: running egg_info HOOK STDOUT: creating pynnotator.egg-info HOOK STDOUT: writing pynnotator.egg-info/PKG-INFO HOOK STDOUT: writing dependency_links to pynnotator.egg-info/dependency_links.txt HOOK STDOUT: writing entry points to pynnotator.egg-info/entry_points.txt HOOK STDOUT: writing requirements to pynnotator.egg-info/requires.txt HOOK STDOUT: writing top-level names to pynnotator.egg-info/top_level.txt HOOK STDOUT: writing manifest file 'pynnotator.egg-info/SOURCES.txt' HOOK STDOUT: reading manifest file 'pynnotator.egg-info/SOURCES.txt' HOOK STDOUT: reading manifest template 'MANIFEST.in' HOOK STDOUT: writing manifest file 'pynnotator.egg-info/SOURCES.txt' Handling wheel from get_requires_for_build_wheel Requirement satisfied: wheel (installed: wheel 0.37.0) package init file 'pynnotator/tests/__init__.py' not found (or not a regular file) warning: no files found matching 'README.rst' warning: no files found matching 'docs/*.txt' warning: no files found matching 'pynnotator/tests/annotation.validated.vcf.gz' HOOK STDOUT: running dist_info HOOK STDOUT: writing pynnotator.egg-info/PKG-INFO HOOK STDOUT: writing dependency_links to pynnotator.egg-info/dependency_links.txt HOOK STDOUT: writing entry points to pynnotator.egg-info/entry_points.txt HOOK STDOUT: writing requirements to pynnotator.egg-info/requires.txt HOOK STDOUT: writing top-level names to pynnotator.egg-info/top_level.txt HOOK STDOUT: reading manifest file 'pynnotator.egg-info/SOURCES.txt' HOOK STDOUT: reading manifest template 'MANIFEST.in' HOOK STDOUT: writing manifest file 'pynnotator.egg-info/SOURCES.txt' HOOK STDOUT: creating '/builddir/build/BUILD/pynnotator-2.0/pynnotator.dist-info' Handling wheel from wheel metadata: Requires-Dist Requirement satisfied: wheel (installed: wheel 0.37.0) Handling pysam from wheel metadata: Requires-Dist Requirement satisfied: pysam (installed: pysam 0.18.0) Handling cython from wheel metadata: Requires-Dist Requirement satisfied: cython (installed: cython 0.29.24) Handling distro from wheel metadata: Requires-Dist Requirement satisfied: distro (installed: distro 1.6.0) + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.qg1AHn + umask 022 + cd /builddir/build/BUILD + cd pynnotator-2.0 + mkdir -p /builddir/build/BUILD/pynnotator-2.0/.pyproject-builddir + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1' + TMPDIR=/builddir/build/BUILD/pynnotator-2.0/.pyproject-builddir + /usr/bin/python3 -m pip wheel --wheel-dir /builddir/build/BUILD/pynnotator-2.0/pyproject-wheeldir --no-deps --use-pep517 --no-build-isolation --disable-pip-version-check --no-clean --progress-bar off --verbose . Processing /builddir/build/BUILD/pynnotator-2.0 Preparing metadata (pyproject.toml): started Running command /usr/bin/python3 /usr/lib/python3.10/site-packages/pip/_vendor/pep517/in_process/_in_process.py prepare_metadata_for_build_wheel /builddir/build/BUILD/pynnotator-2.0/.pyproject-builddir/tmptd38saw7 running dist_info creating /builddir/build/BUILD/pynnotator-2.0/.pyproject-builddir/pip-modern-metadata-780h9v48/pynnotator.egg-info writing /builddir/build/BUILD/pynnotator-2.0/.pyproject-builddir/pip-modern-metadata-780h9v48/pynnotator.egg-info/PKG-INFO writing dependency_links to /builddir/build/BUILD/pynnotator-2.0/.pyproject-builddir/pip-modern-metadata-780h9v48/pynnotator.egg-info/dependency_links.txt writing entry points to /builddir/build/BUILD/pynnotator-2.0/.pyproject-builddir/pip-modern-metadata-780h9v48/pynnotator.egg-info/entry_points.txt writing requirements to /builddir/build/BUILD/pynnotator-2.0/.pyproject-builddir/pip-modern-metadata-780h9v48/pynnotator.egg-info/requires.txt writing top-level names to /builddir/build/BUILD/pynnotator-2.0/.pyproject-builddir/pip-modern-metadata-780h9v48/pynnotator.egg-info/top_level.txt writing manifest file '/builddir/build/BUILD/pynnotator-2.0/.pyproject-builddir/pip-modern-metadata-780h9v48/pynnotator.egg-info/SOURCES.txt' package init file 'pynnotator/tests/__init__.py' not found (or not a regular file) reading manifest file '/builddir/build/BUILD/pynnotator-2.0/.pyproject-builddir/pip-modern-metadata-780h9v48/pynnotator.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'README.rst' warning: no files found matching 'docs/*.txt' warning: no files found matching 'pynnotator/tests/annotation.validated.vcf.gz' writing manifest file '/builddir/build/BUILD/pynnotator-2.0/.pyproject-builddir/pip-modern-metadata-780h9v48/pynnotator.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/pynnotator-2.0/.pyproject-builddir/pip-modern-metadata-780h9v48/pynnotator.dist-info' Preparing metadata (pyproject.toml): finished with status 'done' Building wheels for collected packages: pynnotator Building wheel for pynnotator (pyproject.toml): started Running command /usr/bin/python3 /usr/lib/python3.10/site-packages/pip/_vendor/pep517/in_process/_in_process.py build_wheel /builddir/build/BUILD/pynnotator-2.0/.pyproject-builddir/tmpi09f6rzn running bdist_wheel running build running build_py creating build creating build/lib creating build/lib/pynnotator copying pynnotator/settings.py -> build/lib/pynnotator copying pynnotator/pynnotator.py -> build/lib/pynnotator copying pynnotator/main.py -> build/lib/pynnotator copying pynnotator/install.py -> build/lib/pynnotator copying pynnotator/annotator.py -> build/lib/pynnotator copying pynnotator/__init__.py -> build/lib/pynnotator creating build/lib/pynnotator/helpers copying pynnotator/helpers/vt.py -> build/lib/pynnotator/helpers copying pynnotator/helpers/vep.py -> build/lib/pynnotator/helpers copying pynnotator/helpers/vcfanno.py -> build/lib/pynnotator/helpers copying pynnotator/helpers/vcf_annotator.py -> build/lib/pynnotator/helpers copying pynnotator/helpers/validator.py -> build/lib/pynnotator/helpers copying pynnotator/helpers/tests.py -> build/lib/pynnotator/helpers copying pynnotator/helpers/snpsift.py -> build/lib/pynnotator/helpers copying pynnotator/helpers/snpeff.py -> build/lib/pynnotator/helpers copying pynnotator/helpers/sanity_check.py -> build/lib/pynnotator/helpers copying pynnotator/helpers/merge2.py -> build/lib/pynnotator/helpers copying pynnotator/helpers/merge.pysam.py -> build/lib/pynnotator/helpers copying pynnotator/helpers/merge.py -> build/lib/pynnotator/helpers copying pynnotator/helpers/hgmd.py -> build/lib/pynnotator/helpers copying pynnotator/helpers/gnomad.py -> build/lib/pynnotator/helpers copying pynnotator/helpers/gemini.py -> build/lib/pynnotator/helpers copying pynnotator/helpers/func_pred.py -> build/lib/pynnotator/helpers copying pynnotator/helpers/decipher.py -> build/lib/pynnotator/helpers copying pynnotator/helpers/dbnsfp.snpsift.py -> build/lib/pynnotator/helpers copying pynnotator/helpers/dbnsfp.py -> build/lib/pynnotator/helpers copying pynnotator/helpers/dbnsfp.old.py -> build/lib/pynnotator/helpers copying pynnotator/helpers/dbnsfp.new.py -> build/lib/pynnotator/helpers copying pynnotator/helpers/dbnsfp.cyvcf2.py -> build/lib/pynnotator/helpers copying pynnotator/helpers/dbnsfp.bcftools.py -> build/lib/pynnotator/helpers copying pynnotator/helpers/common.py -> build/lib/pynnotator/helpers copying pynnotator/helpers/__init__.py -> build/lib/pynnotator/helpers package init file 'pynnotator/tests/__init__.py' not found (or not a regular file) creating build/lib/pynnotator/tests copying pynnotator/tests/test_snpeff.py -> build/lib/pynnotator/tests copying pynnotator/tests/test_htslib.py -> build/lib/pynnotator/tests copying pynnotator/tests/test_cyvcf2.py -> build/lib/pynnotator/tests running egg_info creating pynnotator.egg-info writing pynnotator.egg-info/PKG-INFO writing dependency_links to pynnotator.egg-info/dependency_links.txt writing entry points to pynnotator.egg-info/entry_points.txt writing requirements to pynnotator.egg-info/requires.txt writing top-level names to pynnotator.egg-info/top_level.txt writing manifest file 'pynnotator.egg-info/SOURCES.txt' reading manifest file 'pynnotator.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'README.rst' warning: no files found matching 'docs/*.txt' warning: no files found matching 'pynnotator/tests/annotation.validated.vcf.gz' writing manifest file 'pynnotator.egg-info/SOURCES.txt' creating build/lib/pynnotator/scripts copying pynnotator/scripts/download_data.sh -> build/lib/pynnotator/scripts copying pynnotator/scripts/header.vcf -> build/lib/pynnotator/scripts copying pynnotator/scripts/install.sh -> build/lib/pynnotator/scripts copying pynnotator/scripts/install_libs.py -> build/lib/pynnotator/scripts copying pynnotator/scripts/install_vep.sh -> build/lib/pynnotator/scripts copying pynnotator/scripts/test.py -> build/lib/pynnotator/scripts copying pynnotator/scripts/vcf2csv.py -> build/lib/pynnotator/scripts copying pynnotator/tests/sample.1000.vcf.gz -> build/lib/pynnotator/tests creating build/lib/pynnotator/tests/examples copying pynnotator/tests/examples/NA12878.compound_heterozygous.vcf.gz -> build/lib/pynnotator/tests/examples copying pynnotator/tests/examples/NA12878.dominant.vcf.gz -> build/lib/pynnotator/tests/examples copying pynnotator/tests/examples/NA12878.recessive.vcf.gz -> build/lib/pynnotator/tests/examples copying pynnotator/tests/examples/NA12878.xlinked.vcf.gz -> build/lib/pynnotator/tests/examples copying pynnotator/tests/examples/miller.vcf.gz -> build/lib/pynnotator/tests/examples copying pynnotator/tests/examples/schinzel_giedion.vcf.gz -> build/lib/pynnotator/tests/examples installing to build/bdist.linux-x86_64/wheel running install running install_lib creating build/bdist.linux-x86_64 creating build/bdist.linux-x86_64/wheel creating build/bdist.linux-x86_64/wheel/pynnotator creating build/bdist.linux-x86_64/wheel/pynnotator/scripts copying build/lib/pynnotator/scripts/vcf2csv.py -> build/bdist.linux-x86_64/wheel/pynnotator/scripts copying build/lib/pynnotator/scripts/test.py -> build/bdist.linux-x86_64/wheel/pynnotator/scripts copying build/lib/pynnotator/scripts/install_vep.sh -> build/bdist.linux-x86_64/wheel/pynnotator/scripts copying build/lib/pynnotator/scripts/install_libs.py -> build/bdist.linux-x86_64/wheel/pynnotator/scripts copying build/lib/pynnotator/scripts/install.sh -> build/bdist.linux-x86_64/wheel/pynnotator/scripts copying build/lib/pynnotator/scripts/header.vcf -> build/bdist.linux-x86_64/wheel/pynnotator/scripts copying build/lib/pynnotator/scripts/download_data.sh -> build/bdist.linux-x86_64/wheel/pynnotator/scripts creating build/bdist.linux-x86_64/wheel/pynnotator/tests creating build/bdist.linux-x86_64/wheel/pynnotator/tests/examples copying build/lib/pynnotator/tests/examples/schinzel_giedion.vcf.gz -> build/bdist.linux-x86_64/wheel/pynnotator/tests/examples copying build/lib/pynnotator/tests/examples/miller.vcf.gz -> build/bdist.linux-x86_64/wheel/pynnotator/tests/examples copying build/lib/pynnotator/tests/examples/NA12878.xlinked.vcf.gz -> build/bdist.linux-x86_64/wheel/pynnotator/tests/examples copying build/lib/pynnotator/tests/examples/NA12878.recessive.vcf.gz -> build/bdist.linux-x86_64/wheel/pynnotator/tests/examples copying build/lib/pynnotator/tests/examples/NA12878.dominant.vcf.gz -> build/bdist.linux-x86_64/wheel/pynnotator/tests/examples copying build/lib/pynnotator/tests/examples/NA12878.compound_heterozygous.vcf.gz -> build/bdist.linux-x86_64/wheel/pynnotator/tests/examples copying build/lib/pynnotator/tests/sample.1000.vcf.gz -> build/bdist.linux-x86_64/wheel/pynnotator/tests copying build/lib/pynnotator/tests/test_cyvcf2.py -> build/bdist.linux-x86_64/wheel/pynnotator/tests copying build/lib/pynnotator/tests/test_htslib.py -> build/bdist.linux-x86_64/wheel/pynnotator/tests copying build/lib/pynnotator/tests/test_snpeff.py -> build/bdist.linux-x86_64/wheel/pynnotator/tests creating build/bdist.linux-x86_64/wheel/pynnotator/helpers copying build/lib/pynnotator/helpers/__init__.py -> build/bdist.linux-x86_64/wheel/pynnotator/helpers copying build/lib/pynnotator/helpers/common.py -> build/bdist.linux-x86_64/wheel/pynnotator/helpers copying build/lib/pynnotator/helpers/dbnsfp.bcftools.py -> build/bdist.linux-x86_64/wheel/pynnotator/helpers copying build/lib/pynnotator/helpers/dbnsfp.cyvcf2.py -> build/bdist.linux-x86_64/wheel/pynnotator/helpers copying build/lib/pynnotator/helpers/dbnsfp.new.py -> build/bdist.linux-x86_64/wheel/pynnotator/helpers copying build/lib/pynnotator/helpers/dbnsfp.old.py -> build/bdist.linux-x86_64/wheel/pynnotator/helpers copying build/lib/pynnotator/helpers/dbnsfp.py -> build/bdist.linux-x86_64/wheel/pynnotator/helpers copying build/lib/pynnotator/helpers/dbnsfp.snpsift.py -> build/bdist.linux-x86_64/wheel/pynnotator/helpers copying build/lib/pynnotator/helpers/decipher.py -> build/bdist.linux-x86_64/wheel/pynnotator/helpers copying build/lib/pynnotator/helpers/func_pred.py -> build/bdist.linux-x86_64/wheel/pynnotator/helpers copying build/lib/pynnotator/helpers/gemini.py -> build/bdist.linux-x86_64/wheel/pynnotator/helpers copying build/lib/pynnotator/helpers/gnomad.py -> build/bdist.linux-x86_64/wheel/pynnotator/helpers copying build/lib/pynnotator/helpers/hgmd.py -> build/bdist.linux-x86_64/wheel/pynnotator/helpers copying build/lib/pynnotator/helpers/merge.py -> build/bdist.linux-x86_64/wheel/pynnotator/helpers copying build/lib/pynnotator/helpers/merge.pysam.py -> build/bdist.linux-x86_64/wheel/pynnotator/helpers copying build/lib/pynnotator/helpers/merge2.py -> build/bdist.linux-x86_64/wheel/pynnotator/helpers copying build/lib/pynnotator/helpers/sanity_check.py -> build/bdist.linux-x86_64/wheel/pynnotator/helpers copying build/lib/pynnotator/helpers/snpeff.py -> build/bdist.linux-x86_64/wheel/pynnotator/helpers copying build/lib/pynnotator/helpers/snpsift.py -> build/bdist.linux-x86_64/wheel/pynnotator/helpers copying build/lib/pynnotator/helpers/tests.py -> build/bdist.linux-x86_64/wheel/pynnotator/helpers copying build/lib/pynnotator/helpers/validator.py -> build/bdist.linux-x86_64/wheel/pynnotator/helpers copying build/lib/pynnotator/helpers/vcf_annotator.py -> build/bdist.linux-x86_64/wheel/pynnotator/helpers copying build/lib/pynnotator/helpers/vcfanno.py -> build/bdist.linux-x86_64/wheel/pynnotator/helpers copying build/lib/pynnotator/helpers/vep.py -> build/bdist.linux-x86_64/wheel/pynnotator/helpers copying build/lib/pynnotator/helpers/vt.py -> build/bdist.linux-x86_64/wheel/pynnotator/helpers copying build/lib/pynnotator/__init__.py -> build/bdist.linux-x86_64/wheel/pynnotator copying build/lib/pynnotator/annotator.py -> build/bdist.linux-x86_64/wheel/pynnotator copying build/lib/pynnotator/install.py -> build/bdist.linux-x86_64/wheel/pynnotator copying build/lib/pynnotator/main.py -> build/bdist.linux-x86_64/wheel/pynnotator copying build/lib/pynnotator/pynnotator.py -> build/bdist.linux-x86_64/wheel/pynnotator copying build/lib/pynnotator/settings.py -> build/bdist.linux-x86_64/wheel/pynnotator running install_egg_info Copying pynnotator.egg-info to build/bdist.linux-x86_64/wheel/pynnotator-2.0-py3.10.egg-info running install_scripts creating build/bdist.linux-x86_64/wheel/pynnotator-2.0.dist-info/WHEEL creating '/builddir/build/BUILD/pynnotator-2.0/.pyproject-builddir/pip-wheel-yoo14o5z/tmpglajdmzf/pynnotator-2.0-py2.py3-none-any.whl' and adding 'build/bdist.linux-x86_64/wheel' to it adding 'pynnotator/__init__.py' adding 'pynnotator/annotator.py' adding 'pynnotator/install.py' adding 'pynnotator/main.py' adding 'pynnotator/pynnotator.py' adding 'pynnotator/settings.py' adding 'pynnotator/helpers/__init__.py' adding 'pynnotator/helpers/common.py' adding 'pynnotator/helpers/dbnsfp.bcftools.py' adding 'pynnotator/helpers/dbnsfp.cyvcf2.py' adding 'pynnotator/helpers/dbnsfp.new.py' adding 'pynnotator/helpers/dbnsfp.old.py' adding 'pynnotator/helpers/dbnsfp.py' adding 'pynnotator/helpers/dbnsfp.snpsift.py' adding 'pynnotator/helpers/decipher.py' adding 'pynnotator/helpers/func_pred.py' adding 'pynnotator/helpers/gemini.py' adding 'pynnotator/helpers/gnomad.py' adding 'pynnotator/helpers/hgmd.py' adding 'pynnotator/helpers/merge.py' adding 'pynnotator/helpers/merge.pysam.py' adding 'pynnotator/helpers/merge2.py' adding 'pynnotator/helpers/sanity_check.py' adding 'pynnotator/helpers/snpeff.py' adding 'pynnotator/helpers/snpsift.py' adding 'pynnotator/helpers/tests.py' adding 'pynnotator/helpers/validator.py' adding 'pynnotator/helpers/vcf_annotator.py' adding 'pynnotator/helpers/vcfanno.py' adding 'pynnotator/helpers/vep.py' adding 'pynnotator/helpers/vt.py' adding 'pynnotator/scripts/download_data.sh' adding 'pynnotator/scripts/header.vcf' adding 'pynnotator/scripts/install.sh' adding 'pynnotator/scripts/install_libs.py' adding 'pynnotator/scripts/install_vep.sh' adding 'pynnotator/scripts/test.py' adding 'pynnotator/scripts/vcf2csv.py' adding 'pynnotator/tests/sample.1000.vcf.gz' adding 'pynnotator/tests/test_cyvcf2.py' adding 'pynnotator/tests/test_htslib.py' adding 'pynnotator/tests/test_snpeff.py' adding 'pynnotator/tests/examples/NA12878.compound_heterozygous.vcf.gz' adding 'pynnotator/tests/examples/NA12878.dominant.vcf.gz' adding 'pynnotator/tests/examples/NA12878.recessive.vcf.gz' adding 'pynnotator/tests/examples/NA12878.xlinked.vcf.gz' adding 'pynnotator/tests/examples/miller.vcf.gz' adding 'pynnotator/tests/examples/schinzel_giedion.vcf.gz' adding 'pynnotator-2.0.dist-info/METADATA' adding 'pynnotator-2.0.dist-info/WHEEL' adding 'pynnotator-2.0.dist-info/entry_points.txt' adding 'pynnotator-2.0.dist-info/top_level.txt' adding 'pynnotator-2.0.dist-info/RECORD' removing build/bdist.linux-x86_64/wheel Building wheel for pynnotator (pyproject.toml): finished with status 'done' Created wheel for pynnotator: filename=pynnotator-2.0-py2.py3-none-any.whl size=7805999 sha256=a3a591c889ae742289cc2c8c1fa986f1d70878bb4ca87530e0695d7be59921fe Stored in directory: /builddir/.cache/pip/wheels/0b/a5/ed/9fba25de0d94d13bf32630195abb650c51d0570a786a7ef7f5 Successfully built pynnotator + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.SZWozY + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/python-pynnotator-2.0-1.fc36.x86_64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/python-pynnotator-2.0-1.fc36.x86_64 ++ dirname /builddir/build/BUILDROOT/python-pynnotator-2.0-1.fc36.x86_64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/python-pynnotator-2.0-1.fc36.x86_64 + cd pynnotator-2.0 ++ ls /builddir/build/BUILD/pynnotator-2.0/pyproject-wheeldir/pynnotator-2.0-py2.py3-none-any.whl ++ sed -E 's/([^-]+)-([^-]+)-.+\.whl/\1==\2/' ++ xargs basename --multiple + specifier=pynnotator==2.0 + TMPDIR=/builddir/build/BUILD/pynnotator-2.0/.pyproject-builddir + /usr/bin/python3 -m pip install --root /builddir/build/BUILDROOT/python-pynnotator-2.0-1.fc36.x86_64 --no-deps --disable-pip-version-check --progress-bar off --verbose --ignore-installed --no-warn-script-location --no-index --no-cache-dir --find-links /builddir/build/BUILD/pynnotator-2.0/pyproject-wheeldir pynnotator==2.0 Using pip 21.3.1 from /usr/lib/python3.10/site-packages/pip (python 3.10) Looking in links: /builddir/build/BUILD/pynnotator-2.0/pyproject-wheeldir Processing ./pyproject-wheeldir/pynnotator-2.0-py2.py3-none-any.whl Installing collected packages: pynnotator Creating /builddir/build/BUILDROOT/python-pynnotator-2.0-1.fc36.x86_64/usr/bin changing mode of /builddir/build/BUILDROOT/python-pynnotator-2.0-1.fc36.x86_64/usr/bin/pynnotator to 755 Successfully installed pynnotator-2.0 + '[' -d /builddir/build/BUILDROOT/python-pynnotator-2.0-1.fc36.x86_64/usr/bin ']' + '[' -f /usr/bin/pathfix3.10.py ']' + pathfix=/usr/bin/pathfix3.10.py + '[' -z s ']' + shebang_flags=-kas + /usr/bin/pathfix3.10.py -pni /usr/bin/python3 -kas /builddir/build/BUILDROOT/python-pynnotator-2.0-1.fc36.x86_64/usr/bin/pynnotator /builddir/build/BUILDROOT/python-pynnotator-2.0-1.fc36.x86_64/usr/bin/pynnotator: updating + rm -rfv /builddir/build/BUILDROOT/python-pynnotator-2.0-1.fc36.x86_64/usr/bin/__pycache__ + rm -f /builddir/build/BUILD/pyproject-ghost-distinfo + site_dirs=() + '[' -d /builddir/build/BUILDROOT/python-pynnotator-2.0-1.fc36.x86_64/usr/lib/python3.10/site-packages ']' + site_dirs+=("/usr/lib/python3.10/site-packages") + '[' /builddir/build/BUILDROOT/python-pynnotator-2.0-1.fc36.x86_64/usr/lib64/python3.10/site-packages '!=' /builddir/build/BUILDROOT/python-pynnotator-2.0-1.fc36.x86_64/usr/lib/python3.10/site-packages ']' + '[' -d /builddir/build/BUILDROOT/python-pynnotator-2.0-1.fc36.x86_64/usr/lib64/python3.10/site-packages ']' + for site_dir in ${site_dirs[@]} + for distinfo in /builddir/build/BUILDROOT/python-pynnotator-2.0-1.fc36.x86_64$site_dir/*.dist-info + echo '%ghost /usr/lib/python3.10/site-packages/pynnotator-2.0.dist-info' + sed -i s/pip/rpm/ /builddir/build/BUILDROOT/python-pynnotator-2.0-1.fc36.x86_64/usr/lib/python3.10/site-packages/pynnotator-2.0.dist-info/INSTALLER + PYTHONPATH=/usr/lib/rpm/redhat + /usr/bin/python3 -B /usr/lib/rpm/redhat/pyproject_preprocess_record.py --buildroot /builddir/build/BUILDROOT/python-pynnotator-2.0-1.fc36.x86_64 --record /builddir/build/BUILDROOT/python-pynnotator-2.0-1.fc36.x86_64/usr/lib/python3.10/site-packages/pynnotator-2.0.dist-info/RECORD --output /builddir/build/BUILD/pyproject-record + rm -fv /builddir/build/BUILDROOT/python-pynnotator-2.0-1.fc36.x86_64/usr/lib/python3.10/site-packages/pynnotator-2.0.dist-info/RECORD removed '/builddir/build/BUILDROOT/python-pynnotator-2.0-1.fc36.x86_64/usr/lib/python3.10/site-packages/pynnotator-2.0.dist-info/RECORD' + rm -fv /builddir/build/BUILDROOT/python-pynnotator-2.0-1.fc36.x86_64/usr/lib/python3.10/site-packages/pynnotator-2.0.dist-info/REQUESTED removed '/builddir/build/BUILDROOT/python-pynnotator-2.0-1.fc36.x86_64/usr/lib/python3.10/site-packages/pynnotator-2.0.dist-info/REQUESTED' ++ wc -l /builddir/build/BUILD/pyproject-ghost-distinfo ++ cut -f1 '-d ' + lines=1 + '[' 1 -ne 1 ']' + /usr/bin/python3 /usr/lib/rpm/redhat/pyproject_save_files.py --output-files /builddir/build/BUILD/pyproject-files --output-modules /builddir/build/BUILD/pyproject-modules --buildroot /builddir/build/BUILDROOT/python-pynnotator-2.0-1.fc36.x86_64 --sitelib /usr/lib/python3.10/site-packages --sitearch /usr/lib64/python3.10/site-packages --python-version 3.10 --pyproject-record /builddir/build/BUILD/pyproject-record '*' +auto + /usr/bin/find-debuginfo -j2 --strict-build-id -m -i --build-id-seed 2.0-1.fc36 --unique-debug-suffix -2.0-1.fc36.x86_64 --unique-debug-src-base python-pynnotator-2.0-1.fc36.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/pynnotator-2.0 find: 'debug': No such file or directory + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs + /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 Bytecompiling .py files below /builddir/build/BUILDROOT/python-pynnotator-2.0-1.fc36.x86_64/usr/lib/python3.10 using python3.10 + /usr/lib/rpm/redhat/brp-python-hardlink Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.0vc2DV + umask 022 + cd /builddir/build/BUILD + cd pynnotator-2.0 + '[' '!' -f /builddir/build/BUILD/pyproject-modules ']' + PATH=/builddir/build/BUILDROOT/python-pynnotator-2.0-1.fc36.x86_64/usr/bin:/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin + PYTHONPATH=/builddir/build/BUILDROOT/python-pynnotator-2.0-1.fc36.x86_64/usr/lib64/python3.10/site-packages:/builddir/build/BUILDROOT/python-pynnotator-2.0-1.fc36.x86_64/usr/lib/python3.10/site-packages + _PYTHONSITE=/builddir/build/BUILDROOT/python-pynnotator-2.0-1.fc36.x86_64/usr/lib64/python3.10/site-packages:/builddir/build/BUILDROOT/python-pynnotator-2.0-1.fc36.x86_64/usr/lib/python3.10/site-packages + PYTHONDONTWRITEBYTECODE=1 + /usr/bin/python3 -s /usr/lib/rpm/redhat/import_all_modules.py -f /builddir/build/BUILD/pyproject-modules -t Check import: pynnotator + RPM_EC=0 ++ jobs -p + exit 0 Processing files: python3-pynnotator-2.0-1.fc36.noarch Provides: python-pynnotator = 2.0-1.fc36 python3-pynnotator = 2.0-1.fc36 python3.10-pynnotator = 2.0-1.fc36 python3.10dist(pynnotator) = 2 python3dist(pynnotator) = 2 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: /usr/bin/python3 python(abi) = 3.10 python3.10dist(cython) python3.10dist(distro) python3.10dist(pysam) python3.10dist(wheel) Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/python-pynnotator-2.0-1.fc36.x86_64 Wrote: /builddir/build/SRPMS/python-pynnotator-2.0-1.fc36.src.rpm Wrote: /builddir/build/RPMS/python3-pynnotator-2.0-1.fc36.noarch.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.X4MYa7 + umask 022 + cd /builddir/build/BUILD + cd pynnotator-2.0 + /usr/bin/rm -rf /builddir/build/BUILDROOT/python-pynnotator-2.0-1.fc36.x86_64 + RPM_EC=0 ++ jobs -p + exit 0 Child return code was: 0