Mock Version: 3.5 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/python-cg-lims.spec'], chrootPath='/var/lib/mock/fedora-rawhide-x86_64-1678979536.005264/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1001gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.2tpqgeb_:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueprintOutput=True) Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.2tpqgeb_:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '4b58c7fd62ef47f2b39cde40f13d0c8a', '-D', '/var/lib/mock/fedora-rawhide-x86_64-1678979536.005264/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.2tpqgeb_:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/python-cg-lims.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1678924800 Wrote: /builddir/build/SRPMS/python-cg-lims-6.8.0-1.fc39.src.rpm Child return code was: 0 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -br --target x86_64 --nodeps /builddir/build/SPECS/python-cg-lims.spec'], chrootPath='/var/lib/mock/fedora-rawhide-x86_64-1678979536.005264/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1001gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.2tpqgeb_:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueraiseExc=FalseprintOutput=True) Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.2tpqgeb_:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', 'f8bc1230f6204e1d8a9c0c2032cf54a4', '-D', '/var/lib/mock/fedora-rawhide-x86_64-1678979536.005264/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.2tpqgeb_:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -br --target x86_64 --nodeps /builddir/build/SPECS/python-cg-lims.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1678924800 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.FpWAv6 + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf cg_lims-6.8.0 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/cg_lims-6.8.0.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd cg_lims-6.8.0 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + RPM_EC=0 ++ jobs -p + exit 0 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.bSWK6T + umask 022 + cd /builddir/build/BUILD + cd cg_lims-6.8.0 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(pip) >= 19' + echo 'python3dist(packaging)' + '[' -f pyproject.toml ']' + '[' -f setup.py ']' + echo 'python3dist(setuptools) >= 40.8' + echo 'python3dist(wheel)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/cg_lims-6.8.0/.pyproject-builddir + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + TMPDIR=/builddir/build/BUILD/cg_lims-6.8.0/.pyproject-builddir + RPM_TOXENV=py311 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/cg_lims-6.8.0/pyproject-wheeldir Handling setuptools >= 40.8 from default build backend Requirement not satisfied: setuptools >= 40.8 Handling wheel from default build backend Requirement not satisfied: wheel Exiting dependency generation pass: build backend + rm -rfv '*.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/python-cg-lims-6.8.0-1.fc39.buildreqs.nosrc.rpm Child return code was: 11 Dynamic buildrequires detected Going to install missing buildrequires. See root.log for details. ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -br --target x86_64 --nodeps /builddir/build/SPECS/python-cg-lims.spec'], chrootPath='/var/lib/mock/fedora-rawhide-x86_64-1678979536.005264/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1001gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.2tpqgeb_:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueraiseExc=FalseprintOutput=True) Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.2tpqgeb_:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '0162207ecb7441678fe532d6d40a967a', '-D', '/var/lib/mock/fedora-rawhide-x86_64-1678979536.005264/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.2tpqgeb_:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -br --target x86_64 --nodeps /builddir/build/SPECS/python-cg-lims.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1678924800 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.5ZDu6V + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf cg_lims-6.8.0 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/cg_lims-6.8.0.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd cg_lims-6.8.0 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + RPM_EC=0 ++ jobs -p + exit 0 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.DpmhJL + umask 022 + cd /builddir/build/BUILD + cd cg_lims-6.8.0 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(pip) >= 19' + echo 'python3dist(packaging)' + '[' -f pyproject.toml ']' + '[' -f setup.py ']' + echo 'python3dist(setuptools) >= 40.8' + echo 'python3dist(wheel)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/cg_lims-6.8.0/.pyproject-builddir + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + TMPDIR=/builddir/build/BUILD/cg_lims-6.8.0/.pyproject-builddir + RPM_TOXENV=py311 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/cg_lims-6.8.0/pyproject-wheeldir Handling setuptools >= 40.8 from default build backend Requirement satisfied: setuptools >= 40.8 (installed: setuptools 67.6.0) Handling wheel from default build backend Requirement satisfied: wheel (installed: wheel 0.38.4) HOOK STDOUT: running egg_info HOOK STDOUT: writing cg_lims.egg-info/PKG-INFO HOOK STDOUT: writing dependency_links to cg_lims.egg-info/dependency_links.txt HOOK STDOUT: writing entry points to cg_lims.egg-info/entry_points.txt HOOK STDOUT: writing top-level names to cg_lims.egg-info/top_level.txt HOOK STDOUT: reading manifest file 'cg_lims.egg-info/SOURCES.txt' HOOK STDOUT: writing manifest file 'cg_lims.egg-info/SOURCES.txt' Handling wheel from get_requires_for_build_wheel Requirement satisfied: wheel (installed: wheel 0.38.4) --- Logging error --- Traceback (most recent call last): File "/usr/lib64/python3.11/logging/__init__.py", line 1113, in emit stream.write(msg + self.terminator) ValueError: I/O operation on closed file. Call stack: File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 550, in main(sys.argv[1:]) File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 532, in main generate_requires( File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 444, in generate_requires generate_run_requirements(backend, requirements, build_wheel=build_wheel, wheeldir=wheeldir) File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 354, in generate_run_requirements generate_run_requirements_hook(backend, requirements) File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 310, in generate_run_requirements_hook dir_basename = prepare_metadata('.') File "/usr/lib/python3.11/site-packages/setuptools/build_meta.py", line 377, in prepare_metadata_for_build_wheel self.run_setup() File "/usr/lib/python3.11/site-packages/setuptools/build_meta.py", line 485, in run_setup self).run_setup(setup_script=setup_script) File "/usr/lib/python3.11/site-packages/setuptools/build_meta.py", line 335, in run_setup exec(code, locals()) File "", line 17, in File "/usr/lib/python3.11/site-packages/setuptools/__init__.py", line 108, in setup return distutils.core.setup(**attrs) File "/usr/lib/python3.11/site-packages/setuptools/_distutils/core.py", line 185, in setup return run_commands(dist) File "/usr/lib/python3.11/site-packages/setuptools/_distutils/core.py", line 201, in run_commands dist.run_commands() File "/usr/lib/python3.11/site-packages/setuptools/_distutils/dist.py", line 969, in run_commands self.run_command(cmd) File "/usr/lib/python3.11/site-packages/setuptools/dist.py", line 1221, in run_command super().run_command(command) File "/usr/lib/python3.11/site-packages/setuptools/_distutils/dist.py", line 985, in run_command log.info("running %s", command) Message: 'running %s' Arguments: ('dist_info',) --- Logging error --- Traceback (most recent call last): File "/usr/lib64/python3.11/logging/__init__.py", line 1113, in emit stream.write(msg + self.terminator) ValueError: I/O operation on closed file. Call stack: File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 550, in main(sys.argv[1:]) File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 532, in main generate_requires( File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 444, in generate_requires generate_run_requirements(backend, requirements, build_wheel=build_wheel, wheeldir=wheeldir) File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 354, in generate_run_requirements generate_run_requirements_hook(backend, requirements) File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 310, in generate_run_requirements_hook dir_basename = prepare_metadata('.') File "/usr/lib/python3.11/site-packages/setuptools/build_meta.py", line 377, in prepare_metadata_for_build_wheel self.run_setup() File "/usr/lib/python3.11/site-packages/setuptools/build_meta.py", line 485, in run_setup self).run_setup(setup_script=setup_script) File "/usr/lib/python3.11/site-packages/setuptools/build_meta.py", line 335, in run_setup exec(code, locals()) File "", line 17, in File "/usr/lib/python3.11/site-packages/setuptools/__init__.py", line 108, in setup return distutils.core.setup(**attrs) File "/usr/lib/python3.11/site-packages/setuptools/_distutils/core.py", line 185, in setup return run_commands(dist) File "/usr/lib/python3.11/site-packages/setuptools/_distutils/core.py", line 201, in run_commands dist.run_commands() File "/usr/lib/python3.11/site-packages/setuptools/_distutils/dist.py", line 969, in run_commands self.run_command(cmd) File "/usr/lib/python3.11/site-packages/setuptools/dist.py", line 1221, in run_command super().run_command(command) File "/usr/lib/python3.11/site-packages/setuptools/_distutils/dist.py", line 988, in run_command cmd_obj.run() File "/usr/lib/python3.11/site-packages/setuptools/command/dist_info.py", line 98, in run self.egg_info.run() File "/usr/lib/python3.11/site-packages/setuptools/command/egg_info.py", line 311, in run writer(self, ep.name, os.path.join(self.egg_info, ep.name)) File "/usr/lib/python3.11/site-packages/setuptools/command/egg_info.py", line 684, in write_pkg_info log.info("writing %s", filename) Message: 'writing %s' Arguments: ('cg_lims.egg-info/PKG-INFO',) --- Logging error --- Traceback (most recent call last): File "/usr/lib64/python3.11/logging/__init__.py", line 1113, in emit stream.write(msg + self.terminator) ValueError: I/O operation on closed file. Call stack: File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 550, in main(sys.argv[1:]) File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 532, in main generate_requires( File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 444, in generate_requires generate_run_requirements(backend, requirements, build_wheel=build_wheel, wheeldir=wheeldir) File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 354, in generate_run_requirements generate_run_requirements_hook(backend, requirements) File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 310, in generate_run_requirements_hook dir_basename = prepare_metadata('.') File "/usr/lib/python3.11/site-packages/setuptools/build_meta.py", line 377, in prepare_metadata_for_build_wheel self.run_setup() File "/usr/lib/python3.11/site-packages/setuptools/build_meta.py", line 485, in run_setup self).run_setup(setup_script=setup_script) File "/usr/lib/python3.11/site-packages/setuptools/build_meta.py", line 335, in run_setup exec(code, locals()) File "", line 17, in File "/usr/lib/python3.11/site-packages/setuptools/__init__.py", line 108, in setup return distutils.core.setup(**attrs) File "/usr/lib/python3.11/site-packages/setuptools/_distutils/core.py", line 185, in setup return run_commands(dist) File "/usr/lib/python3.11/site-packages/setuptools/_distutils/core.py", line 201, in run_commands dist.run_commands() File "/usr/lib/python3.11/site-packages/setuptools/_distutils/dist.py", line 969, in run_commands self.run_command(cmd) File "/usr/lib/python3.11/site-packages/setuptools/dist.py", line 1221, in run_command super().run_command(command) File "/usr/lib/python3.11/site-packages/setuptools/_distutils/dist.py", line 988, in run_command cmd_obj.run() File "/usr/lib/python3.11/site-packages/setuptools/command/dist_info.py", line 98, in run self.egg_info.run() File "/usr/lib/python3.11/site-packages/setuptools/command/egg_info.py", line 311, in run writer(self, ep.name, os.path.join(self.egg_info, ep.name)) File "/usr/lib/python3.11/site-packages/setuptools/command/egg_info.py", line 747, in overwrite_arg write_arg(cmd, basename, filename, True) File "/usr/lib/python3.11/site-packages/setuptools/command/egg_info.py", line 755, in write_arg cmd.write_or_delete_file(argname, filename, value, force) File "/usr/lib/python3.11/site-packages/setuptools/command/egg_info.py", line 273, in write_or_delete_file self.write_file(what, filename, data) File "/usr/lib/python3.11/site-packages/setuptools/command/egg_info.py", line 289, in write_file log.info("writing %s to %s", what, filename) Message: 'writing %s to %s' Arguments: ('dependency_links', 'cg_lims.egg-info/dependency_links.txt') --- Logging error --- Traceback (most recent call last): File "/usr/lib64/python3.11/logging/__init__.py", line 1113, in emit stream.write(msg + self.terminator) ValueError: I/O operation on closed file. Call stack: File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 550, in main(sys.argv[1:]) File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 532, in main generate_requires( File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 444, in generate_requires generate_run_requirements(backend, requirements, build_wheel=build_wheel, wheeldir=wheeldir) File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 354, in generate_run_requirements generate_run_requirements_hook(backend, requirements) File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 310, in generate_run_requirements_hook dir_basename = prepare_metadata('.') File "/usr/lib/python3.11/site-packages/setuptools/build_meta.py", line 377, in prepare_metadata_for_build_wheel self.run_setup() File "/usr/lib/python3.11/site-packages/setuptools/build_meta.py", line 485, in run_setup self).run_setup(setup_script=setup_script) File "/usr/lib/python3.11/site-packages/setuptools/build_meta.py", line 335, in run_setup exec(code, locals()) File "", line 17, in File "/usr/lib/python3.11/site-packages/setuptools/__init__.py", line 108, in setup return distutils.core.setup(**attrs) File "/usr/lib/python3.11/site-packages/setuptools/_distutils/core.py", line 185, in setup return run_commands(dist) File "/usr/lib/python3.11/site-packages/setuptools/_distutils/core.py", line 201, in run_commands dist.run_commands() File "/usr/lib/python3.11/site-packages/setuptools/_distutils/dist.py", line 969, in run_commands self.run_command(cmd) File "/usr/lib/python3.11/site-packages/setuptools/dist.py", line 1221, in run_command super().run_command(command) File "/usr/lib/python3.11/site-packages/setuptools/_distutils/dist.py", line 988, in run_command cmd_obj.run() File "/usr/lib/python3.11/site-packages/setuptools/command/dist_info.py", line 98, in run self.egg_info.run() File "/usr/lib/python3.11/site-packages/setuptools/command/egg_info.py", line 311, in run writer(self, ep.name, os.path.join(self.egg_info, ep.name)) File "/usr/lib/python3.11/site-packages/setuptools/command/egg_info.py", line 761, in write_entries cmd.write_or_delete_file('entry points', filename, defn, True) File "/usr/lib/python3.11/site-packages/setuptools/command/egg_info.py", line 273, in write_or_delete_file self.write_file(what, filename, data) File "/usr/lib/python3.11/site-packages/setuptools/command/egg_info.py", line 289, in write_file log.info("writing %s to %s", what, filename) Message: 'writing %s to %s' Arguments: ('entry points', 'cg_lims.egg-info/entry_points.txt') --- Logging error --- Traceback (most recent call last): File "/usr/lib64/python3.11/logging/__init__.py", line 1113, in emit stream.write(msg + self.terminator) ValueError: I/O operation on closed file. Call stack: File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 550, in main(sys.argv[1:]) File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 532, in main generate_requires( File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 444, in generate_requires generate_run_requirements(backend, requirements, build_wheel=build_wheel, wheeldir=wheeldir) File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 354, in generate_run_requirements generate_run_requirements_hook(backend, requirements) File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 310, in generate_run_requirements_hook dir_basename = prepare_metadata('.') File "/usr/lib/python3.11/site-packages/setuptools/build_meta.py", line 377, in prepare_metadata_for_build_wheel self.run_setup() File "/usr/lib/python3.11/site-packages/setuptools/build_meta.py", line 485, in run_setup self).run_setup(setup_script=setup_script) File "/usr/lib/python3.11/site-packages/setuptools/build_meta.py", line 335, in run_setup exec(code, locals()) File "", line 17, in File "/usr/lib/python3.11/site-packages/setuptools/__init__.py", line 108, in setup return distutils.core.setup(**attrs) File "/usr/lib/python3.11/site-packages/setuptools/_distutils/core.py", line 185, in setup return run_commands(dist) File "/usr/lib/python3.11/site-packages/setuptools/_distutils/core.py", line 201, in run_commands dist.run_commands() File "/usr/lib/python3.11/site-packages/setuptools/_distutils/dist.py", line 969, in run_commands self.run_command(cmd) File "/usr/lib/python3.11/site-packages/setuptools/dist.py", line 1221, in run_command super().run_command(command) File "/usr/lib/python3.11/site-packages/setuptools/_distutils/dist.py", line 988, in run_command cmd_obj.run() File "/usr/lib/python3.11/site-packages/setuptools/command/dist_info.py", line 98, in run self.egg_info.run() File "/usr/lib/python3.11/site-packages/setuptools/command/egg_info.py", line 311, in run writer(self, ep.name, os.path.join(self.egg_info, ep.name)) File "/usr/lib/python3.11/site-packages/setuptools/command/egg_info.py", line 743, in write_toplevel_names cmd.write_file("top-level names", filename, '\n'.join(sorted(pkgs)) + '\n') File "/usr/lib/python3.11/site-packages/setuptools/command/egg_info.py", line 289, in write_file log.info("writing %s to %s", what, filename) Message: 'writing %s to %s' Arguments: ('top-level names', 'cg_lims.egg-info/top_level.txt') --- Logging error --- Traceback (most recent call last): File "/usr/lib64/python3.11/logging/__init__.py", line 1113, in emit stream.write(msg + self.terminator) ValueError: I/O operation on closed file. Call stack: File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 550, in main(sys.argv[1:]) File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 532, in main generate_requires( File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 444, in generate_requires generate_run_requirements(backend, requirements, build_wheel=build_wheel, wheeldir=wheeldir) File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 354, in generate_run_requirements generate_run_requirements_hook(backend, requirements) File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 310, in generate_run_requirements_hook dir_basename = prepare_metadata('.') File "/usr/lib/python3.11/site-packages/setuptools/build_meta.py", line 377, in prepare_metadata_for_build_wheel self.run_setup() File "/usr/lib/python3.11/site-packages/setuptools/build_meta.py", line 485, in run_setup self).run_setup(setup_script=setup_script) File "/usr/lib/python3.11/site-packages/setuptools/build_meta.py", line 335, in run_setup exec(code, locals()) File "", line 17, in File "/usr/lib/python3.11/site-packages/setuptools/__init__.py", line 108, in setup return distutils.core.setup(**attrs) File "/usr/lib/python3.11/site-packages/setuptools/_distutils/core.py", line 185, in setup return run_commands(dist) File "/usr/lib/python3.11/site-packages/setuptools/_distutils/core.py", line 201, in run_commands dist.run_commands() File "/usr/lib/python3.11/site-packages/setuptools/_distutils/dist.py", line 969, in run_commands self.run_command(cmd) File "/usr/lib/python3.11/site-packages/setuptools/dist.py", line 1221, in run_command super().run_command(command) File "/usr/lib/python3.11/site-packages/setuptools/_distutils/dist.py", line 988, in run_command cmd_obj.run() File "/usr/lib/python3.11/site-packages/setuptools/command/dist_info.py", line 98, in run self.egg_info.run() File "/usr/lib/python3.11/site-packages/setuptools/command/egg_info.py", line 318, in run self.find_sources() File "/usr/lib/python3.11/site-packages/setuptools/command/egg_info.py", line 326, in find_sources mm.run() File "/usr/lib/python3.11/site-packages/setuptools/command/egg_info.py", line 570, in run self.add_defaults() File "/usr/lib/python3.11/site-packages/setuptools/command/egg_info.py", line 615, in add_defaults self.read_manifest() File "/usr/lib/python3.11/site-packages/setuptools/command/sdist.py", line 196, in read_manifest log.info("reading manifest file '%s'", self.manifest) Message: "reading manifest file '%s'" Arguments: ('cg_lims.egg-info/SOURCES.txt',) --- Logging error --- Traceback (most recent call last): File "/usr/lib64/python3.11/logging/__init__.py", line 1113, in emit stream.write(msg + self.terminator) ValueError: I/O operation on closed file. Call stack: File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 550, in main(sys.argv[1:]) File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 532, in main generate_requires( File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 444, in generate_requires generate_run_requirements(backend, requirements, build_wheel=build_wheel, wheeldir=wheeldir) File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 354, in generate_run_requirements generate_run_requirements_hook(backend, requirements) File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 310, in generate_run_requirements_hook dir_basename = prepare_metadata('.') File "/usr/lib/python3.11/site-packages/setuptools/build_meta.py", line 377, in prepare_metadata_for_build_wheel self.run_setup() File "/usr/lib/python3.11/site-packages/setuptools/build_meta.py", line 485, in run_setup self).run_setup(setup_script=setup_script) File "/usr/lib/python3.11/site-packages/setuptools/build_meta.py", line 335, in run_setup exec(code, locals()) File "", line 17, in File "/usr/lib/python3.11/site-packages/setuptools/__init__.py", line 108, in setup return distutils.core.setup(**attrs) File "/usr/lib/python3.11/site-packages/setuptools/_distutils/core.py", line 185, in setup return run_commands(dist) File "/usr/lib/python3.11/site-packages/setuptools/_distutils/core.py", line 201, in run_commands dist.run_commands() File "/usr/lib/python3.11/site-packages/setuptools/_distutils/dist.py", line 969, in run_commands self.run_command(cmd) File "/usr/lib/python3.11/site-packages/setuptools/dist.py", line 1221, in run_command super().run_command(command) File "/usr/lib/python3.11/site-packages/setuptools/_distutils/dist.py", line 988, in run_command cmd_obj.run() File "/usr/lib/python3.11/site-packages/setuptools/command/dist_info.py", line 98, in run self.egg_info.run() File "/usr/lib/python3.11/site-packages/setuptools/command/egg_info.py", line 318, in run self.find_sources() File "/usr/lib/python3.11/site-packages/setuptools/command/egg_info.py", line 326, in find_sources mm.run() File "/usr/lib/python3.11/site-packages/setuptools/command/egg_info.py", line 578, in run self.write_manifest() File "/usr/lib/python3.11/site-packages/setuptools/command/egg_info.py", line 594, in write_manifest self.execute(write_file, (self.manifest, files), msg) File "/usr/lib/python3.11/site-packages/setuptools/_distutils/cmd.py", line 339, in execute util.execute(func, args, msg, dry_run=self.dry_run) File "/usr/lib/python3.11/site-packages/setuptools/_distutils/util.py", line 335, in execute log.info(msg) Message: "writing manifest file 'cg_lims.egg-info/SOURCES.txt'" Arguments: () --- Logging error --- Traceback (most recent call last): File "/usr/lib64/python3.11/logging/__init__.py", line 1113, in emit stream.write(msg + self.terminator) ValueError: I/O operation on closed file. Call stack: File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 550, in main(sys.argv[1:]) File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 532, in main generate_requires( File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 444, in generate_requires generate_run_requirements(backend, requirements, build_wheel=build_wheel, wheeldir=wheeldir) File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 354, in generate_run_requirements generate_run_requirements_hook(backend, requirements) File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 310, in generate_run_requirements_hook dir_basename = prepare_metadata('.') File "/usr/lib/python3.11/site-packages/setuptools/build_meta.py", line 377, in prepare_metadata_for_build_wheel self.run_setup() File "/usr/lib/python3.11/site-packages/setuptools/build_meta.py", line 485, in run_setup self).run_setup(setup_script=setup_script) File "/usr/lib/python3.11/site-packages/setuptools/build_meta.py", line 335, in run_setup exec(code, locals()) File "", line 17, in File "/usr/lib/python3.11/site-packages/setuptools/__init__.py", line 108, in setup return distutils.core.setup(**attrs) File "/usr/lib/python3.11/site-packages/setuptools/_distutils/core.py", line 185, in setup return run_commands(dist) File "/usr/lib/python3.11/site-packages/setuptools/_distutils/core.py", line 201, in run_commands dist.run_commands() File "/usr/lib/python3.11/site-packages/setuptools/_distutils/dist.py", line 969, in run_commands self.run_command(cmd) File "/usr/lib/python3.11/site-packages/setuptools/dist.py", line 1221, in run_command super().run_command(command) File "/usr/lib/python3.11/site-packages/setuptools/_distutils/dist.py", line 988, in run_command cmd_obj.run() File "/usr/lib/python3.11/site-packages/setuptools/command/dist_info.py", line 102, in run log.info("creating '{}'".format(os.path.abspath(self.dist_info_dir))) Message: "creating '/builddir/build/BUILD/cg_lims-6.8.0/cg_lims-6.8.0.dist-info'" Arguments: () + rm -rfv cg_lims-6.8.0.dist-info/ removed 'cg_lims-6.8.0.dist-info/METADATA' removed 'cg_lims-6.8.0.dist-info/entry_points.txt' removed 'cg_lims-6.8.0.dist-info/top_level.txt' removed directory 'cg_lims-6.8.0.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/python-cg-lims-6.8.0-1.fc39.buildreqs.nosrc.rpm Child return code was: 11 Dynamic buildrequires detected Going to install missing buildrequires. See root.log for details. ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -ba --noprep --target x86_64 --nodeps /builddir/build/SPECS/python-cg-lims.spec'], chrootPath='/var/lib/mock/fedora-rawhide-x86_64-1678979536.005264/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1001gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.2tpqgeb_:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueprintOutput=True) Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.2tpqgeb_:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '8122e3af501a4c38be62617cae2bd6c7', '-D', '/var/lib/mock/fedora-rawhide-x86_64-1678979536.005264/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.2tpqgeb_:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -ba --noprep --target x86_64 --nodeps /builddir/build/SPECS/python-cg-lims.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1678924800 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.YxpNjV + umask 022 + cd /builddir/build/BUILD + cd cg_lims-6.8.0 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(pip) >= 19' + echo 'python3dist(packaging)' + '[' -f pyproject.toml ']' + '[' -f setup.py ']' + echo 'python3dist(setuptools) >= 40.8' + echo 'python3dist(wheel)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/cg_lims-6.8.0/.pyproject-builddir + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + TMPDIR=/builddir/build/BUILD/cg_lims-6.8.0/.pyproject-builddir + RPM_TOXENV=py311 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/cg_lims-6.8.0/pyproject-wheeldir Handling setuptools >= 40.8 from default build backend Requirement satisfied: setuptools >= 40.8 (installed: setuptools 67.6.0) Handling wheel from default build backend Requirement satisfied: wheel (installed: wheel 0.38.4) HOOK STDOUT: running egg_info HOOK STDOUT: writing cg_lims.egg-info/PKG-INFO HOOK STDOUT: writing dependency_links to cg_lims.egg-info/dependency_links.txt HOOK STDOUT: writing entry points to cg_lims.egg-info/entry_points.txt HOOK STDOUT: writing top-level names to cg_lims.egg-info/top_level.txt HOOK STDOUT: reading manifest file 'cg_lims.egg-info/SOURCES.txt' HOOK STDOUT: writing manifest file 'cg_lims.egg-info/SOURCES.txt' Handling wheel from get_requires_for_build_wheel Requirement satisfied: wheel (installed: wheel 0.38.4) --- Logging error --- Traceback (most recent call last): File "/usr/lib64/python3.11/logging/__init__.py", line 1113, in emit stream.write(msg + self.terminator) ValueError: I/O operation on closed file. Call stack: File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 550, in main(sys.argv[1:]) File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 532, in main generate_requires( File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 444, in generate_requires generate_run_requirements(backend, requirements, build_wheel=build_wheel, wheeldir=wheeldir) File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 354, in generate_run_requirements generate_run_requirements_hook(backend, requirements) File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 310, in generate_run_requirements_hook dir_basename = prepare_metadata('.') File "/usr/lib/python3.11/site-packages/setuptools/build_meta.py", line 377, in prepare_metadata_for_build_wheel self.run_setup() File "/usr/lib/python3.11/site-packages/setuptools/build_meta.py", line 485, in run_setup self).run_setup(setup_script=setup_script) File "/usr/lib/python3.11/site-packages/setuptools/build_meta.py", line 335, in run_setup exec(code, locals()) File "", line 17, in File "/usr/lib/python3.11/site-packages/setuptools/__init__.py", line 108, in setup return distutils.core.setup(**attrs) File "/usr/lib/python3.11/site-packages/setuptools/_distutils/core.py", line 185, in setup return run_commands(dist) File "/usr/lib/python3.11/site-packages/setuptools/_distutils/core.py", line 201, in run_commands dist.run_commands() File "/usr/lib/python3.11/site-packages/setuptools/_distutils/dist.py", line 969, in run_commands self.run_command(cmd) File "/usr/lib/python3.11/site-packages/setuptools/dist.py", line 1221, in run_command super().run_command(command) File "/usr/lib/python3.11/site-packages/setuptools/_distutils/dist.py", line 985, in run_command log.info("running %s", command) Message: 'running %s' Arguments: ('dist_info',) --- Logging error --- Traceback (most recent call last): File "/usr/lib64/python3.11/logging/__init__.py", line 1113, in emit stream.write(msg + self.terminator) ValueError: I/O operation on closed file. Call stack: File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 550, in main(sys.argv[1:]) File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 532, in main generate_requires( File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 444, in generate_requires generate_run_requirements(backend, requirements, build_wheel=build_wheel, wheeldir=wheeldir) File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 354, in generate_run_requirements generate_run_requirements_hook(backend, requirements) File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 310, in generate_run_requirements_hook dir_basename = prepare_metadata('.') File "/usr/lib/python3.11/site-packages/setuptools/build_meta.py", line 377, in prepare_metadata_for_build_wheel self.run_setup() File "/usr/lib/python3.11/site-packages/setuptools/build_meta.py", line 485, in run_setup self).run_setup(setup_script=setup_script) File "/usr/lib/python3.11/site-packages/setuptools/build_meta.py", line 335, in run_setup exec(code, locals()) File "", line 17, in File "/usr/lib/python3.11/site-packages/setuptools/__init__.py", line 108, in setup return distutils.core.setup(**attrs) File "/usr/lib/python3.11/site-packages/setuptools/_distutils/core.py", line 185, in setup return run_commands(dist) File "/usr/lib/python3.11/site-packages/setuptools/_distutils/core.py", line 201, in run_commands dist.run_commands() File "/usr/lib/python3.11/site-packages/setuptools/_distutils/dist.py", line 969, in run_commands self.run_command(cmd) File "/usr/lib/python3.11/site-packages/setuptools/dist.py", line 1221, in run_command super().run_command(command) File "/usr/lib/python3.11/site-packages/setuptools/_distutils/dist.py", line 988, in run_command cmd_obj.run() File "/usr/lib/python3.11/site-packages/setuptools/command/dist_info.py", line 98, in run self.egg_info.run() File "/usr/lib/python3.11/site-packages/setuptools/command/egg_info.py", line 311, in run writer(self, ep.name, os.path.join(self.egg_info, ep.name)) File "/usr/lib/python3.11/site-packages/setuptools/command/egg_info.py", line 684, in write_pkg_info log.info("writing %s", filename) Message: 'writing %s' Arguments: ('cg_lims.egg-info/PKG-INFO',) --- Logging error --- Traceback (most recent call last): File "/usr/lib64/python3.11/logging/__init__.py", line 1113, in emit stream.write(msg + self.terminator) ValueError: I/O operation on closed file. Call stack: File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 550, in main(sys.argv[1:]) File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 532, in main generate_requires( File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 444, in generate_requires generate_run_requirements(backend, requirements, build_wheel=build_wheel, wheeldir=wheeldir) File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 354, in generate_run_requirements generate_run_requirements_hook(backend, requirements) File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 310, in generate_run_requirements_hook dir_basename = prepare_metadata('.') File "/usr/lib/python3.11/site-packages/setuptools/build_meta.py", line 377, in prepare_metadata_for_build_wheel self.run_setup() File "/usr/lib/python3.11/site-packages/setuptools/build_meta.py", line 485, in run_setup self).run_setup(setup_script=setup_script) File "/usr/lib/python3.11/site-packages/setuptools/build_meta.py", line 335, in run_setup exec(code, locals()) File "", line 17, in File "/usr/lib/python3.11/site-packages/setuptools/__init__.py", line 108, in setup return distutils.core.setup(**attrs) File "/usr/lib/python3.11/site-packages/setuptools/_distutils/core.py", line 185, in setup return run_commands(dist) File "/usr/lib/python3.11/site-packages/setuptools/_distutils/core.py", line 201, in run_commands dist.run_commands() File "/usr/lib/python3.11/site-packages/setuptools/_distutils/dist.py", line 969, in run_commands self.run_command(cmd) File "/usr/lib/python3.11/site-packages/setuptools/dist.py", line 1221, in run_command super().run_command(command) File "/usr/lib/python3.11/site-packages/setuptools/_distutils/dist.py", line 988, in run_command cmd_obj.run() File "/usr/lib/python3.11/site-packages/setuptools/command/dist_info.py", line 98, in run self.egg_info.run() File "/usr/lib/python3.11/site-packages/setuptools/command/egg_info.py", line 311, in run writer(self, ep.name, os.path.join(self.egg_info, ep.name)) File "/usr/lib/python3.11/site-packages/setuptools/command/egg_info.py", line 747, in overwrite_arg write_arg(cmd, basename, filename, True) File "/usr/lib/python3.11/site-packages/setuptools/command/egg_info.py", line 755, in write_arg cmd.write_or_delete_file(argname, filename, value, force) File "/usr/lib/python3.11/site-packages/setuptools/command/egg_info.py", line 273, in write_or_delete_file self.write_file(what, filename, data) File "/usr/lib/python3.11/site-packages/setuptools/command/egg_info.py", line 289, in write_file log.info("writing %s to %s", what, filename) Message: 'writing %s to %s' Arguments: ('dependency_links', 'cg_lims.egg-info/dependency_links.txt') --- Logging error --- Traceback (most recent call last): File "/usr/lib64/python3.11/logging/__init__.py", line 1113, in emit stream.write(msg + self.terminator) ValueError: I/O operation on closed file. Call stack: File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 550, in main(sys.argv[1:]) File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 532, in main generate_requires( File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 444, in generate_requires generate_run_requirements(backend, requirements, build_wheel=build_wheel, wheeldir=wheeldir) File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 354, in generate_run_requirements generate_run_requirements_hook(backend, requirements) File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 310, in generate_run_requirements_hook dir_basename = prepare_metadata('.') File "/usr/lib/python3.11/site-packages/setuptools/build_meta.py", line 377, in prepare_metadata_for_build_wheel self.run_setup() File "/usr/lib/python3.11/site-packages/setuptools/build_meta.py", line 485, in run_setup self).run_setup(setup_script=setup_script) File "/usr/lib/python3.11/site-packages/setuptools/build_meta.py", line 335, in run_setup exec(code, locals()) File "", line 17, in File "/usr/lib/python3.11/site-packages/setuptools/__init__.py", line 108, in setup return distutils.core.setup(**attrs) File "/usr/lib/python3.11/site-packages/setuptools/_distutils/core.py", line 185, in setup return run_commands(dist) File "/usr/lib/python3.11/site-packages/setuptools/_distutils/core.py", line 201, in run_commands dist.run_commands() File "/usr/lib/python3.11/site-packages/setuptools/_distutils/dist.py", line 969, in run_commands self.run_command(cmd) File "/usr/lib/python3.11/site-packages/setuptools/dist.py", line 1221, in run_command super().run_command(command) File "/usr/lib/python3.11/site-packages/setuptools/_distutils/dist.py", line 988, in run_command cmd_obj.run() File "/usr/lib/python3.11/site-packages/setuptools/command/dist_info.py", line 98, in run self.egg_info.run() File "/usr/lib/python3.11/site-packages/setuptools/command/egg_info.py", line 311, in run writer(self, ep.name, os.path.join(self.egg_info, ep.name)) File "/usr/lib/python3.11/site-packages/setuptools/command/egg_info.py", line 761, in write_entries cmd.write_or_delete_file('entry points', filename, defn, True) File "/usr/lib/python3.11/site-packages/setuptools/command/egg_info.py", line 273, in write_or_delete_file self.write_file(what, filename, data) File "/usr/lib/python3.11/site-packages/setuptools/command/egg_info.py", line 289, in write_file log.info("writing %s to %s", what, filename) Message: 'writing %s to %s' Arguments: ('entry points', 'cg_lims.egg-info/entry_points.txt') --- Logging error --- Traceback (most recent call last): File "/usr/lib64/python3.11/logging/__init__.py", line 1113, in emit stream.write(msg + self.terminator) ValueError: I/O operation on closed file. Call stack: File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 550, in main(sys.argv[1:]) File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 532, in main generate_requires( File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 444, in generate_requires generate_run_requirements(backend, requirements, build_wheel=build_wheel, wheeldir=wheeldir) File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 354, in generate_run_requirements generate_run_requirements_hook(backend, requirements) File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 310, in generate_run_requirements_hook dir_basename = prepare_metadata('.') File "/usr/lib/python3.11/site-packages/setuptools/build_meta.py", line 377, in prepare_metadata_for_build_wheel self.run_setup() File "/usr/lib/python3.11/site-packages/setuptools/build_meta.py", line 485, in run_setup self).run_setup(setup_script=setup_script) File "/usr/lib/python3.11/site-packages/setuptools/build_meta.py", line 335, in run_setup exec(code, locals()) File "", line 17, in File "/usr/lib/python3.11/site-packages/setuptools/__init__.py", line 108, in setup return distutils.core.setup(**attrs) File "/usr/lib/python3.11/site-packages/setuptools/_distutils/core.py", line 185, in setup return run_commands(dist) File "/usr/lib/python3.11/site-packages/setuptools/_distutils/core.py", line 201, in run_commands dist.run_commands() File "/usr/lib/python3.11/site-packages/setuptools/_distutils/dist.py", line 969, in run_commands self.run_command(cmd) File "/usr/lib/python3.11/site-packages/setuptools/dist.py", line 1221, in run_command super().run_command(command) File "/usr/lib/python3.11/site-packages/setuptools/_distutils/dist.py", line 988, in run_command cmd_obj.run() File "/usr/lib/python3.11/site-packages/setuptools/command/dist_info.py", line 98, in run self.egg_info.run() File "/usr/lib/python3.11/site-packages/setuptools/command/egg_info.py", line 311, in run writer(self, ep.name, os.path.join(self.egg_info, ep.name)) File "/usr/lib/python3.11/site-packages/setuptools/command/egg_info.py", line 743, in write_toplevel_names cmd.write_file("top-level names", filename, '\n'.join(sorted(pkgs)) + '\n') File "/usr/lib/python3.11/site-packages/setuptools/command/egg_info.py", line 289, in write_file log.info("writing %s to %s", what, filename) Message: 'writing %s to %s' Arguments: ('top-level names', 'cg_lims.egg-info/top_level.txt') --- Logging error --- Traceback (most recent call last): File "/usr/lib64/python3.11/logging/__init__.py", line 1113, in emit stream.write(msg + self.terminator) ValueError: I/O operation on closed file. Call stack: File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 550, in main(sys.argv[1:]) File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 532, in main generate_requires( File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 444, in generate_requires generate_run_requirements(backend, requirements, build_wheel=build_wheel, wheeldir=wheeldir) File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 354, in generate_run_requirements generate_run_requirements_hook(backend, requirements) File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 310, in generate_run_requirements_hook dir_basename = prepare_metadata('.') File "/usr/lib/python3.11/site-packages/setuptools/build_meta.py", line 377, in prepare_metadata_for_build_wheel self.run_setup() File "/usr/lib/python3.11/site-packages/setuptools/build_meta.py", line 485, in run_setup self).run_setup(setup_script=setup_script) File "/usr/lib/python3.11/site-packages/setuptools/build_meta.py", line 335, in run_setup exec(code, locals()) File "", line 17, in File "/usr/lib/python3.11/site-packages/setuptools/__init__.py", line 108, in setup return distutils.core.setup(**attrs) File "/usr/lib/python3.11/site-packages/setuptools/_distutils/core.py", line 185, in setup return run_commands(dist) File "/usr/lib/python3.11/site-packages/setuptools/_distutils/core.py", line 201, in run_commands dist.run_commands() File "/usr/lib/python3.11/site-packages/setuptools/_distutils/dist.py", line 969, in run_commands self.run_command(cmd) File "/usr/lib/python3.11/site-packages/setuptools/dist.py", line 1221, in run_command super().run_command(command) File "/usr/lib/python3.11/site-packages/setuptools/_distutils/dist.py", line 988, in run_command cmd_obj.run() File "/usr/lib/python3.11/site-packages/setuptools/command/dist_info.py", line 98, in run self.egg_info.run() File "/usr/lib/python3.11/site-packages/setuptools/command/egg_info.py", line 318, in run self.find_sources() File "/usr/lib/python3.11/site-packages/setuptools/command/egg_info.py", line 326, in find_sources mm.run() File "/usr/lib/python3.11/site-packages/setuptools/command/egg_info.py", line 570, in run self.add_defaults() File "/usr/lib/python3.11/site-packages/setuptools/command/egg_info.py", line 615, in add_defaults self.read_manifest() File "/usr/lib/python3.11/site-packages/setuptools/command/sdist.py", line 196, in read_manifest log.info("reading manifest file '%s'", self.manifest) Message: "reading manifest file '%s'" Arguments: ('cg_lims.egg-info/SOURCES.txt',) --- Logging error --- Traceback (most recent call last): File "/usr/lib64/python3.11/logging/__init__.py", line 1113, in emit stream.write(msg + self.terminator) ValueError: I/O operation on closed file. Call stack: File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 550, in main(sys.argv[1:]) File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 532, in main generate_requires( File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 444, in generate_requires generate_run_requirements(backend, requirements, build_wheel=build_wheel, wheeldir=wheeldir) File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 354, in generate_run_requirements generate_run_requirements_hook(backend, requirements) File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 310, in generate_run_requirements_hook dir_basename = prepare_metadata('.') File "/usr/lib/python3.11/site-packages/setuptools/build_meta.py", line 377, in prepare_metadata_for_build_wheel self.run_setup() File "/usr/lib/python3.11/site-packages/setuptools/build_meta.py", line 485, in run_setup self).run_setup(setup_script=setup_script) File "/usr/lib/python3.11/site-packages/setuptools/build_meta.py", line 335, in run_setup exec(code, locals()) File "", line 17, in File "/usr/lib/python3.11/site-packages/setuptools/__init__.py", line 108, in setup return distutils.core.setup(**attrs) File "/usr/lib/python3.11/site-packages/setuptools/_distutils/core.py", line 185, in setup return run_commands(dist) File "/usr/lib/python3.11/site-packages/setuptools/_distutils/core.py", line 201, in run_commands dist.run_commands() File "/usr/lib/python3.11/site-packages/setuptools/_distutils/dist.py", line 969, in run_commands self.run_command(cmd) File "/usr/lib/python3.11/site-packages/setuptools/dist.py", line 1221, in run_command super().run_command(command) File "/usr/lib/python3.11/site-packages/setuptools/_distutils/dist.py", line 988, in run_command cmd_obj.run() File "/usr/lib/python3.11/site-packages/setuptools/command/dist_info.py", line 98, in run self.egg_info.run() File "/usr/lib/python3.11/site-packages/setuptools/command/egg_info.py", line 318, in run self.find_sources() File "/usr/lib/python3.11/site-packages/setuptools/command/egg_info.py", line 326, in find_sources mm.run() File "/usr/lib/python3.11/site-packages/setuptools/command/egg_info.py", line 578, in run self.write_manifest() File "/usr/lib/python3.11/site-packages/setuptools/command/egg_info.py", line 594, in write_manifest self.execute(write_file, (self.manifest, files), msg) File "/usr/lib/python3.11/site-packages/setuptools/_distutils/cmd.py", line 339, in execute util.execute(func, args, msg, dry_run=self.dry_run) File "/usr/lib/python3.11/site-packages/setuptools/_distutils/util.py", line 335, in execute log.info(msg) Message: "writing manifest file 'cg_lims.egg-info/SOURCES.txt'" Arguments: () --- Logging error --- Traceback (most recent call last): File "/usr/lib64/python3.11/logging/__init__.py", line 1113, in emit stream.write(msg + self.terminator) ValueError: I/O operation on closed file. Call stack: File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 550, in main(sys.argv[1:]) File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 532, in main generate_requires( File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 444, in generate_requires generate_run_requirements(backend, requirements, build_wheel=build_wheel, wheeldir=wheeldir) File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 354, in generate_run_requirements generate_run_requirements_hook(backend, requirements) File "/usr/lib/rpm/redhat/pyproject_buildrequires.py", line 310, in generate_run_requirements_hook dir_basename = prepare_metadata('.') File "/usr/lib/python3.11/site-packages/setuptools/build_meta.py", line 377, in prepare_metadata_for_build_wheel self.run_setup() File "/usr/lib/python3.11/site-packages/setuptools/build_meta.py", line 485, in run_setup self).run_setup(setup_script=setup_script) File "/usr/lib/python3.11/site-packages/setuptools/build_meta.py", line 335, in run_setup exec(code, locals()) File "", line 17, in File "/usr/lib/python3.11/site-packages/setuptools/__init__.py", line 108, in setup return distutils.core.setup(**attrs) File "/usr/lib/python3.11/site-packages/setuptools/_distutils/core.py", line 185, in setup return run_commands(dist) File "/usr/lib/python3.11/site-packages/setuptools/_distutils/core.py", line 201, in run_commands dist.run_commands() File "/usr/lib/python3.11/site-packages/setuptools/_distutils/dist.py", line 969, in run_commands self.run_command(cmd) File "/usr/lib/python3.11/site-packages/setuptools/dist.py", line 1221, in run_command super().run_command(command) File "/usr/lib/python3.11/site-packages/setuptools/_distutils/dist.py", line 988, in run_command cmd_obj.run() File "/usr/lib/python3.11/site-packages/setuptools/command/dist_info.py", line 102, in run log.info("creating '{}'".format(os.path.abspath(self.dist_info_dir))) Message: "creating '/builddir/build/BUILD/cg_lims-6.8.0/cg_lims-6.8.0.dist-info'" Arguments: () + rm -rfv cg_lims-6.8.0.dist-info/ removed 'cg_lims-6.8.0.dist-info/METADATA' removed 'cg_lims-6.8.0.dist-info/top_level.txt' removed 'cg_lims-6.8.0.dist-info/entry_points.txt' removed directory 'cg_lims-6.8.0.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.Cf3Pqs + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd cg_lims-6.8.0 + mkdir -p /builddir/build/BUILD/cg_lims-6.8.0/.pyproject-builddir + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + TMPDIR=/builddir/build/BUILD/cg_lims-6.8.0/.pyproject-builddir + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_wheel.py /builddir/build/BUILD/cg_lims-6.8.0/pyproject-wheeldir Processing /builddir/build/BUILD/cg_lims-6.8.0 Preparing metadata (pyproject.toml): started Running command Preparing metadata (pyproject.toml) running dist_info creating /builddir/build/BUILD/cg_lims-6.8.0/.pyproject-builddir/pip-modern-metadata-qnnca10x/cg_lims.egg-info writing /builddir/build/BUILD/cg_lims-6.8.0/.pyproject-builddir/pip-modern-metadata-qnnca10x/cg_lims.egg-info/PKG-INFO writing dependency_links to /builddir/build/BUILD/cg_lims-6.8.0/.pyproject-builddir/pip-modern-metadata-qnnca10x/cg_lims.egg-info/dependency_links.txt writing entry points to /builddir/build/BUILD/cg_lims-6.8.0/.pyproject-builddir/pip-modern-metadata-qnnca10x/cg_lims.egg-info/entry_points.txt writing top-level names to /builddir/build/BUILD/cg_lims-6.8.0/.pyproject-builddir/pip-modern-metadata-qnnca10x/cg_lims.egg-info/top_level.txt writing manifest file '/builddir/build/BUILD/cg_lims-6.8.0/.pyproject-builddir/pip-modern-metadata-qnnca10x/cg_lims.egg-info/SOURCES.txt' reading manifest file '/builddir/build/BUILD/cg_lims-6.8.0/.pyproject-builddir/pip-modern-metadata-qnnca10x/cg_lims.egg-info/SOURCES.txt' writing manifest file '/builddir/build/BUILD/cg_lims-6.8.0/.pyproject-builddir/pip-modern-metadata-qnnca10x/cg_lims.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/cg_lims-6.8.0/.pyproject-builddir/pip-modern-metadata-qnnca10x/cg_lims-6.8.0.dist-info' Preparing metadata (pyproject.toml): finished with status 'done' Building wheels for collected packages: cg-lims Building wheel for cg-lims (pyproject.toml): started Running command Building wheel for cg-lims (pyproject.toml) running bdist_wheel running build running build_py creating build creating build/lib creating build/lib/tests copying tests/conftest.py -> build/lib/tests copying tests/__init__.py -> build/lib/tests creating build/lib/cg_lims copying cg_lims/status_db_api.py -> build/lib/cg_lims copying cg_lims/options.py -> build/lib/cg_lims copying cg_lims/objects.py -> build/lib/cg_lims copying cg_lims/exceptions.py -> build/lib/cg_lims copying cg_lims/__init__.py -> build/lib/cg_lims creating build/lib/tests/get copying tests/get/test_udfs.py -> build/lib/tests/get copying tests/get/test_artifacts.py -> build/lib/tests/get copying tests/get/__init__.py -> build/lib/tests/get creating build/lib/tests/EPPs copying tests/EPPs/__init__.py -> build/lib/tests/EPPs creating build/lib/tests/EPPs/udf copying tests/EPPs/udf/__init__.py -> build/lib/tests/EPPs/udf creating build/lib/tests/EPPs/files copying tests/EPPs/files/test_sars_cov2_prep_file.py -> build/lib/tests/EPPs/files copying tests/EPPs/files/test_make_kapa_csv.py -> build/lib/tests/EPPs/files copying tests/EPPs/files/test_hamilton_normalization_file.py -> build/lib/tests/EPPs/files copying tests/EPPs/files/test_buffer_exchange_twist_file.py -> build/lib/tests/EPPs/files copying tests/EPPs/files/test_barcode_tubes.py -> build/lib/tests/EPPs/files copying tests/EPPs/files/__init__.py -> build/lib/tests/EPPs/files creating build/lib/tests/EPPs/arnold copying tests/EPPs/arnold/test_arnold_wgs_prep.py -> build/lib/tests/EPPs/arnold copying tests/EPPs/arnold/test_arnold_twist_prep.py -> build/lib/tests/EPPs/arnold copying tests/EPPs/arnold/test_arnold_novaseq_standard.py -> build/lib/tests/EPPs/arnold copying tests/EPPs/arnold/test_arnold_microbial_prep.py -> build/lib/tests/EPPs/arnold copying tests/EPPs/arnold/test_arnold_load_flowcell.py -> build/lib/tests/EPPs/arnold copying tests/EPPs/arnold/test_arnold_covid_prep.py -> build/lib/tests/EPPs/arnold copying tests/EPPs/arnold/__init__.py -> build/lib/tests/EPPs/arnold creating build/lib/tests/EPPs/udf/set copying tests/EPPs/udf/set/test_set_samples_reads_missing.py -> build/lib/tests/EPPs/udf/set copying tests/EPPs/udf/set/test_set_method.py -> build/lib/tests/EPPs/udf/set copying tests/EPPs/udf/set/test_set_dates.py -> build/lib/tests/EPPs/udf/set copying tests/EPPs/udf/set/test_set_barcode.py -> build/lib/tests/EPPs/udf/set copying tests/EPPs/udf/set/test_qc_to_sample.py -> build/lib/tests/EPPs/udf/set copying tests/EPPs/udf/set/__init__.py -> build/lib/tests/EPPs/udf/set creating build/lib/tests/EPPs/udf/copy copying tests/EPPs/udf/copy/test_original_position.py -> build/lib/tests/EPPs/udf/copy copying tests/EPPs/udf/copy/test_measurement_to_analyte.py -> build/lib/tests/EPPs/udf/copy copying tests/EPPs/udf/copy/test_artifact_to_artifact.py -> build/lib/tests/EPPs/udf/copy copying tests/EPPs/udf/copy/test_aggregate_qc_flags_and_copy_fields.py -> build/lib/tests/EPPs/udf/copy copying tests/EPPs/udf/copy/__init__.py -> build/lib/tests/EPPs/udf/copy creating build/lib/tests/EPPs/udf/check copying tests/EPPs/udf/check/test_check_artifact_udfs.py -> build/lib/tests/EPPs/udf/check copying tests/EPPs/udf/check/__init__.py -> build/lib/tests/EPPs/udf/check creating build/lib/tests/EPPs/udf/calculate copying tests/EPPs/udf/calculate/test_twist_qc_amount.py -> build/lib/tests/EPPs/udf/calculate copying tests/EPPs/udf/calculate/test_sum_missing_reads_in_pool.py -> build/lib/tests/EPPs/udf/calculate copying tests/EPPs/udf/calculate/test_maf_calculate_volume.py -> build/lib/tests/EPPs/udf/calculate copying tests/EPPs/udf/calculate/test_find_reads_to_sequence.py -> build/lib/tests/EPPs/udf/calculate copying tests/EPPs/udf/calculate/test_calculate_water_volume_rna.py -> build/lib/tests/EPPs/udf/calculate copying tests/EPPs/udf/calculate/test_calculate_resuspension_buffer_volumes.py -> build/lib/tests/EPPs/udf/calculate copying tests/EPPs/udf/calculate/test_calculate_microbial_aliquot_volumes.py -> build/lib/tests/EPPs/udf/calculate copying tests/EPPs/udf/calculate/test_calculate_beads.py -> build/lib/tests/EPPs/udf/calculate copying tests/EPPs/udf/calculate/test_calculate_average_size_and_set_qc.py -> build/lib/tests/EPPs/udf/calculate copying tests/EPPs/udf/calculate/__init__.py -> build/lib/tests/EPPs/udf/calculate creating build/lib/cg_lims/set copying cg_lims/set/udfs.py -> build/lib/cg_lims/set copying cg_lims/set/qc.py -> build/lib/cg_lims/set copying cg_lims/set/__init__.py -> build/lib/cg_lims/set creating build/lib/cg_lims/scripts copying cg_lims/scripts/prepare_fixture.py -> build/lib/cg_lims/scripts copying cg_lims/scripts/fetch_sample_info.py -> build/lib/cg_lims/scripts copying cg_lims/scripts/check_config.py -> build/lib/cg_lims/scripts copying cg_lims/scripts/base.py -> build/lib/cg_lims/scripts copying cg_lims/scripts/__init__.py -> build/lib/cg_lims/scripts creating build/lib/cg_lims/put copying cg_lims/put/queue.py -> build/lib/cg_lims/put copying cg_lims/put/__init__.py -> build/lib/cg_lims/put creating build/lib/cg_lims/models copying cg_lims/models/context.py -> build/lib/cg_lims/models copying cg_lims/models/__init__.py -> build/lib/cg_lims/models creating build/lib/cg_lims/get copying cg_lims/get/udfs.py -> build/lib/cg_lims/get copying cg_lims/get/samples.py -> build/lib/cg_lims/get copying cg_lims/get/processes.py -> build/lib/cg_lims/get copying cg_lims/get/ids.py -> build/lib/cg_lims/get copying cg_lims/get/files.py -> build/lib/cg_lims/get copying cg_lims/get/fields.py -> build/lib/cg_lims/get copying cg_lims/get/artifacts.py -> build/lib/cg_lims/get copying cg_lims/get/__init__.py -> build/lib/cg_lims/get creating build/lib/cg_lims/files copying cg_lims/files/manage_csv_files.py -> build/lib/cg_lims/files copying cg_lims/files/__init__.py -> build/lib/cg_lims/files creating build/lib/cg_lims/commands copying cg_lims/commands/base.py -> build/lib/cg_lims/commands copying cg_lims/commands/__init__.py -> build/lib/cg_lims/commands creating build/lib/cg_lims/EPPs copying cg_lims/EPPs/base.py -> build/lib/cg_lims/EPPs copying cg_lims/EPPs/__init__.py -> build/lib/cg_lims/EPPs creating build/lib/cg_lims/scripts/one_time_scripts copying cg_lims/scripts/one_time_scripts/process_to_artifact.py -> build/lib/cg_lims/scripts/one_time_scripts copying cg_lims/scripts/one_time_scripts/load_arnold_steps.py -> build/lib/cg_lims/scripts/one_time_scripts copying cg_lims/scripts/one_time_scripts/load_arnold_flowcells.py -> build/lib/cg_lims/scripts/one_time_scripts copying cg_lims/scripts/one_time_scripts/base.py -> build/lib/cg_lims/scripts/one_time_scripts copying cg_lims/scripts/one_time_scripts/add_sample_meta_data.py -> build/lib/cg_lims/scripts/one_time_scripts copying cg_lims/scripts/one_time_scripts/__init__.py -> build/lib/cg_lims/scripts/one_time_scripts creating build/lib/cg_lims/models/arnold copying cg_lims/models/arnold/sample.py -> build/lib/cg_lims/models/arnold copying cg_lims/models/arnold/flow_cell.py -> build/lib/cg_lims/models/arnold copying cg_lims/models/arnold/base_step.py -> build/lib/cg_lims/models/arnold copying cg_lims/models/arnold/__init__.py -> build/lib/cg_lims/models/arnold creating build/lib/cg_lims/models/api copying cg_lims/models/api/sample.py -> build/lib/cg_lims/models/api copying cg_lims/models/api/__init__.py -> build/lib/cg_lims/models/api creating build/lib/cg_lims/models/arnold/sequencing copying cg_lims/models/arnold/sequencing/xp_load_to_flowcell.py -> build/lib/cg_lims/models/arnold/sequencing copying cg_lims/models/arnold/sequencing/xp_denature_and_examp.py -> build/lib/cg_lims/models/arnold/sequencing copying cg_lims/models/arnold/sequencing/standard_prepare_for_sequencing.py -> build/lib/cg_lims/models/arnold/sequencing copying cg_lims/models/arnold/sequencing/standard_make_pool_and_denature.py -> build/lib/cg_lims/models/arnold/sequencing copying cg_lims/models/arnold/sequencing/define_run_format.py -> build/lib/cg_lims/models/arnold/sequencing copying cg_lims/models/arnold/sequencing/bcl_conversion_and_demultiplexing.py -> build/lib/cg_lims/models/arnold/sequencing copying cg_lims/models/arnold/sequencing/__init__.py -> build/lib/cg_lims/models/arnold/sequencing creating build/lib/cg_lims/models/arnold/prep copying cg_lims/models/arnold/prep/__init__.py -> build/lib/cg_lims/models/arnold/prep creating build/lib/cg_lims/models/arnold/prep/wgs copying cg_lims/models/arnold/prep/wgs/reception_control.py -> build/lib/cg_lims/models/arnold/prep/wgs copying cg_lims/models/arnold/prep/wgs/fragment_dna_truseq_dna.py -> build/lib/cg_lims/models/arnold/prep/wgs copying cg_lims/models/arnold/prep/wgs/endrepair_size_selection_a_tailing_adapter_ligation.py -> build/lib/cg_lims/models/arnold/prep/wgs copying cg_lims/models/arnold/prep/wgs/aliquot_sampels_for_covaris.py -> build/lib/cg_lims/models/arnold/prep/wgs copying cg_lims/models/arnold/prep/wgs/__init__.py -> build/lib/cg_lims/models/arnold/prep/wgs creating build/lib/cg_lims/models/arnold/prep/twist copying cg_lims/models/arnold/prep/twist/reception_control.py -> build/lib/cg_lims/models/arnold/prep/twist copying cg_lims/models/arnold/prep/twist/pool_samples_twist.py -> build/lib/cg_lims/models/arnold/prep/twist copying cg_lims/models/arnold/prep/twist/normalization_of_samples_for_sequencing.py -> build/lib/cg_lims/models/arnold/prep/twist copying cg_lims/models/arnold/prep/twist/kapa_library_preparation_twist.py -> build/lib/cg_lims/models/arnold/prep/twist copying cg_lims/models/arnold/prep/twist/hybridize_library_twist.py -> build/lib/cg_lims/models/arnold/prep/twist copying cg_lims/models/arnold/prep/twist/enzymatic_fragmentation_twist.py -> build/lib/cg_lims/models/arnold/prep/twist copying cg_lims/models/arnold/prep/twist/capture_and_wash_twist.py -> build/lib/cg_lims/models/arnold/prep/twist copying cg_lims/models/arnold/prep/twist/buffer_exchange.py -> build/lib/cg_lims/models/arnold/prep/twist copying cg_lims/models/arnold/prep/twist/bead_purification_twist.py -> build/lib/cg_lims/models/arnold/prep/twist copying cg_lims/models/arnold/prep/twist/amplify_captured_libraries.py -> build/lib/cg_lims/models/arnold/prep/twist copying cg_lims/models/arnold/prep/twist/aliquot_samples_for_enzymatic_fragmentation_twist.py -> build/lib/cg_lims/models/arnold/prep/twist copying cg_lims/models/arnold/prep/twist/__init__.py -> build/lib/cg_lims/models/arnold/prep/twist creating build/lib/cg_lims/models/arnold/prep/sars_cov_2_prep copying cg_lims/models/arnold/prep/sars_cov_2_prep/reception_control.py -> build/lib/cg_lims/models/arnold/prep/sars_cov_2_prep copying cg_lims/models/arnold/prep/sars_cov_2_prep/pooling_and_cleanup.py -> build/lib/cg_lims/models/arnold/prep/sars_cov_2_prep copying cg_lims/models/arnold/prep/sars_cov_2_prep/library_preparation.py -> build/lib/cg_lims/models/arnold/prep/sars_cov_2_prep copying cg_lims/models/arnold/prep/sars_cov_2_prep/__init__.py -> build/lib/cg_lims/models/arnold/prep/sars_cov_2_prep creating build/lib/cg_lims/models/arnold/prep/rna copying cg_lims/models/arnold/prep/rna/reception_control.py -> build/lib/cg_lims/models/arnold/prep/rna copying cg_lims/models/arnold/prep/rna/normalization_of_samples_for_sequencing.py -> build/lib/cg_lims/models/arnold/prep/rna copying cg_lims/models/arnold/prep/rna/aliquot_samples_for_fragmentation.py -> build/lib/cg_lims/models/arnold/prep/rna copying cg_lims/models/arnold/prep/rna/a_tailing_and_adapter_ligation.py -> build/lib/cg_lims/models/arnold/prep/rna copying cg_lims/models/arnold/prep/rna/__init__.py -> build/lib/cg_lims/models/arnold/prep/rna creating build/lib/cg_lims/models/arnold/prep/microbial_prep copying cg_lims/models/arnold/prep/microbial_prep/reception_control.py -> build/lib/cg_lims/models/arnold/prep/microbial_prep copying cg_lims/models/arnold/prep/microbial_prep/post_pcr_bead_purification.py -> build/lib/cg_lims/models/arnold/prep/microbial_prep copying cg_lims/models/arnold/prep/microbial_prep/normalization_of_microbial_samples.py -> build/lib/cg_lims/models/arnold/prep/microbial_prep copying cg_lims/models/arnold/prep/microbial_prep/normailzation_of_microbial_samples_for_sequencing.py -> build/lib/cg_lims/models/arnold/prep/microbial_prep copying cg_lims/models/arnold/prep/microbial_prep/microbial_library_prep_nextera.py -> build/lib/cg_lims/models/arnold/prep/microbial_prep copying cg_lims/models/arnold/prep/microbial_prep/buffer_exchange.py -> build/lib/cg_lims/models/arnold/prep/microbial_prep copying cg_lims/models/arnold/prep/microbial_prep/__init__.py -> build/lib/cg_lims/models/arnold/prep/microbial_prep creating build/lib/cg_lims/models/api/master_steps copying cg_lims/models/api/master_steps/pool_samples_twist_v2.py -> build/lib/cg_lims/models/api/master_steps copying cg_lims/models/api/master_steps/kapa_library_preparation_twist_v1.py -> build/lib/cg_lims/models/api/master_steps copying cg_lims/models/api/master_steps/hybridize_library_twist_v2.py -> build/lib/cg_lims/models/api/master_steps copying cg_lims/models/api/master_steps/capture_and_wash_twist_v2.py -> build/lib/cg_lims/models/api/master_steps copying cg_lims/models/api/master_steps/buffer_exchange_v2.py -> build/lib/cg_lims/models/api/master_steps copying cg_lims/models/api/master_steps/bead_purification_twist_v2.py -> build/lib/cg_lims/models/api/master_steps copying cg_lims/models/api/master_steps/base_step.py -> build/lib/cg_lims/models/api/master_steps copying cg_lims/models/api/master_steps/aliquot_samples_for_enzymatic_fragmentation_twist.py -> build/lib/cg_lims/models/api/master_steps copying cg_lims/models/api/master_steps/__init__.py -> build/lib/cg_lims/models/api/master_steps creating build/lib/cg_lims/EPPs/udf copying cg_lims/EPPs/udf/base.py -> build/lib/cg_lims/EPPs/udf copying cg_lims/EPPs/udf/__init__.py -> build/lib/cg_lims/EPPs/udf creating build/lib/cg_lims/EPPs/qc copying cg_lims/EPPs/qc/set_qc_fail.py -> build/lib/cg_lims/EPPs/qc copying cg_lims/EPPs/qc/base.py -> build/lib/cg_lims/EPPs/qc copying cg_lims/EPPs/qc/__init__.py -> build/lib/cg_lims/EPPs/qc creating build/lib/cg_lims/EPPs/move copying cg_lims/EPPs/move/rerun_samples.py -> build/lib/cg_lims/EPPs/move copying cg_lims/EPPs/move/place_samples_in_seq_agg.py -> build/lib/cg_lims/EPPs/move copying cg_lims/EPPs/move/move_samples.py -> build/lib/cg_lims/EPPs/move copying cg_lims/EPPs/move/base.py -> build/lib/cg_lims/EPPs/move copying cg_lims/EPPs/move/__init__.py -> build/lib/cg_lims/EPPs/move creating build/lib/cg_lims/EPPs/files copying cg_lims/EPPs/files/file_to_udf.py -> build/lib/cg_lims/EPPs/files copying cg_lims/EPPs/files/base.py -> build/lib/cg_lims/EPPs/files copying cg_lims/EPPs/files/barcode_tubes.py -> build/lib/cg_lims/EPPs/files copying cg_lims/EPPs/files/__init__.py -> build/lib/cg_lims/EPPs/files creating build/lib/cg_lims/EPPs/arnold copying cg_lims/EPPs/arnold/sequencing.py -> build/lib/cg_lims/EPPs/arnold copying cg_lims/EPPs/arnold/sample.py -> build/lib/cg_lims/EPPs/arnold copying cg_lims/EPPs/arnold/prep.py -> build/lib/cg_lims/EPPs/arnold copying cg_lims/EPPs/arnold/flow_cell.py -> build/lib/cg_lims/EPPs/arnold copying cg_lims/EPPs/arnold/base.py -> build/lib/cg_lims/EPPs/arnold copying cg_lims/EPPs/arnold/__init__.py -> build/lib/cg_lims/EPPs/arnold creating build/lib/cg_lims/EPPs/udf/set copying cg_lims/EPPs/udf/set/set_samples_reads_missing.py -> build/lib/cg_lims/EPPs/udf/set copying cg_lims/EPPs/udf/set/set_sample_date.py -> build/lib/cg_lims/EPPs/udf/set copying cg_lims/EPPs/udf/set/set_method.py -> build/lib/cg_lims/EPPs/udf/set copying cg_lims/EPPs/udf/set/set_barcode.py -> build/lib/cg_lims/EPPs/udf/set copying cg_lims/EPPs/udf/set/base.py -> build/lib/cg_lims/EPPs/udf/set copying cg_lims/EPPs/udf/set/__init__.py -> build/lib/cg_lims/EPPs/udf/set creating build/lib/cg_lims/EPPs/udf/copy copying cg_lims/EPPs/udf/copy/sample_to_artifact.py -> build/lib/cg_lims/EPPs/udf/copy copying cg_lims/EPPs/udf/copy/reads_to_sequence.py -> build/lib/cg_lims/EPPs/udf/copy copying cg_lims/EPPs/udf/copy/qc_to_sample.py -> build/lib/cg_lims/EPPs/udf/copy copying cg_lims/EPPs/udf/copy/process_to_sample.py -> build/lib/cg_lims/EPPs/udf/copy copying cg_lims/EPPs/udf/copy/process_to_artifact.py -> build/lib/cg_lims/EPPs/udf/copy copying cg_lims/EPPs/udf/copy/original_well_to_sample.py -> build/lib/cg_lims/EPPs/udf/copy copying cg_lims/EPPs/udf/copy/measurement_to_analyte.py -> build/lib/cg_lims/EPPs/udf/copy copying cg_lims/EPPs/udf/copy/base.py -> build/lib/cg_lims/EPPs/udf/copy copying cg_lims/EPPs/udf/copy/artifact_to_sample.py -> build/lib/cg_lims/EPPs/udf/copy copying cg_lims/EPPs/udf/copy/artifact_to_artifact.py -> build/lib/cg_lims/EPPs/udf/copy copying cg_lims/EPPs/udf/copy/aggregate_qc_flags_and_copy_fields.py -> build/lib/cg_lims/EPPs/udf/copy copying cg_lims/EPPs/udf/copy/__init__.py -> build/lib/cg_lims/EPPs/udf/copy creating build/lib/cg_lims/EPPs/udf/check copying cg_lims/EPPs/udf/check/check_artifact_udfs.py -> build/lib/cg_lims/EPPs/udf/check copying cg_lims/EPPs/udf/check/base.py -> build/lib/cg_lims/EPPs/udf/check copying cg_lims/EPPs/udf/check/__init__.py -> build/lib/cg_lims/EPPs/udf/check creating build/lib/cg_lims/EPPs/udf/calculate copying cg_lims/EPPs/udf/calculate/twist_qc_amount.py -> build/lib/cg_lims/EPPs/udf/calculate copying cg_lims/EPPs/udf/calculate/twist_pool.py -> build/lib/cg_lims/EPPs/udf/calculate copying cg_lims/EPPs/udf/calculate/twist_get_volumes_from_buffer.py -> build/lib/cg_lims/EPPs/udf/calculate copying cg_lims/EPPs/udf/calculate/twist_aliquot_volume.py -> build/lib/cg_lims/EPPs/udf/calculate copying cg_lims/EPPs/udf/calculate/twist_aliquot_amount.py -> build/lib/cg_lims/EPPs/udf/calculate copying cg_lims/EPPs/udf/calculate/sum_missing_reads_in_pool.py -> build/lib/cg_lims/EPPs/udf/calculate copying cg_lims/EPPs/udf/calculate/molar_concentration.py -> build/lib/cg_lims/EPPs/udf/calculate copying cg_lims/EPPs/udf/calculate/maf_calculate_volume.py -> build/lib/cg_lims/EPPs/udf/calculate copying cg_lims/EPPs/udf/calculate/get_missing_reads.py -> build/lib/cg_lims/EPPs/udf/calculate copying cg_lims/EPPs/udf/calculate/calculate_water_volume_rna.py -> build/lib/cg_lims/EPPs/udf/calculate copying cg_lims/EPPs/udf/calculate/calculate_water.py -> build/lib/cg_lims/EPPs/udf/calculate copying cg_lims/EPPs/udf/calculate/calculate_resuspension_buffer_volumes.py -> build/lib/cg_lims/EPPs/udf/calculate copying cg_lims/EPPs/udf/calculate/calculate_microbial_aliquot_volumes.py -> build/lib/cg_lims/EPPs/udf/calculate copying cg_lims/EPPs/udf/calculate/calculate_beads.py -> build/lib/cg_lims/EPPs/udf/calculate copying cg_lims/EPPs/udf/calculate/calculate_average_size_and_set_qc.py -> build/lib/cg_lims/EPPs/udf/calculate copying cg_lims/EPPs/udf/calculate/calculate_amount_ng.py -> build/lib/cg_lims/EPPs/udf/calculate copying cg_lims/EPPs/udf/calculate/base.py -> build/lib/cg_lims/EPPs/udf/calculate copying cg_lims/EPPs/udf/calculate/__init__.py -> build/lib/cg_lims/EPPs/udf/calculate creating build/lib/cg_lims/EPPs/files/pooling_map copying cg_lims/EPPs/files/pooling_map/models.py -> build/lib/cg_lims/EPPs/files/pooling_map copying cg_lims/EPPs/files/pooling_map/make_pooling_map.py -> build/lib/cg_lims/EPPs/files/pooling_map copying cg_lims/EPPs/files/pooling_map/hmtl_templates.py -> build/lib/cg_lims/EPPs/files/pooling_map copying cg_lims/EPPs/files/pooling_map/__init__.py -> build/lib/cg_lims/EPPs/files/pooling_map creating build/lib/cg_lims/EPPs/files/placement_map copying cg_lims/EPPs/files/placement_map/models.py -> build/lib/cg_lims/EPPs/files/placement_map copying cg_lims/EPPs/files/placement_map/make_96well_placement_map.py -> build/lib/cg_lims/EPPs/files/placement_map copying cg_lims/EPPs/files/placement_map/hmtl_templates.py -> build/lib/cg_lims/EPPs/files/placement_map copying cg_lims/EPPs/files/placement_map/__init__.py -> build/lib/cg_lims/EPPs/files/placement_map creating build/lib/cg_lims/EPPs/files/hamilton copying cg_lims/EPPs/files/hamilton/sars_cov2_prep_file.py -> build/lib/cg_lims/EPPs/files/hamilton copying cg_lims/EPPs/files/hamilton/normalization_file.py -> build/lib/cg_lims/EPPs/files/hamilton copying cg_lims/EPPs/files/hamilton/models.py -> build/lib/cg_lims/EPPs/files/hamilton copying cg_lims/EPPs/files/hamilton/make_kapa_csv.py -> build/lib/cg_lims/EPPs/files/hamilton copying cg_lims/EPPs/files/hamilton/buffer_exchange_twist_file.py -> build/lib/cg_lims/EPPs/files/hamilton copying cg_lims/EPPs/files/hamilton/base.py -> build/lib/cg_lims/EPPs/files/hamilton copying cg_lims/EPPs/files/hamilton/__init__.py -> build/lib/cg_lims/EPPs/files/hamilton creating build/lib/cg_lims/EPPs/files/csv_for_kapa_truble_shooting copying cg_lims/EPPs/files/csv_for_kapa_truble_shooting/models.py -> build/lib/cg_lims/EPPs/files/csv_for_kapa_truble_shooting copying cg_lims/EPPs/files/csv_for_kapa_truble_shooting/csv_for_kapa_debug.py -> build/lib/cg_lims/EPPs/files/csv_for_kapa_truble_shooting copying cg_lims/EPPs/files/csv_for_kapa_truble_shooting/__init__.py -> build/lib/cg_lims/EPPs/files/csv_for_kapa_truble_shooting running egg_info writing cg_lims.egg-info/PKG-INFO writing dependency_links to cg_lims.egg-info/dependency_links.txt writing entry points to cg_lims.egg-info/entry_points.txt writing top-level names to cg_lims.egg-info/top_level.txt reading manifest file 'cg_lims.egg-info/SOURCES.txt' writing manifest file 'cg_lims.egg-info/SOURCES.txt' installing to build/bdist.linux-x86_64/wheel running install running install_lib creating build/bdist.linux-x86_64 creating build/bdist.linux-x86_64/wheel creating build/bdist.linux-x86_64/wheel/cg_lims creating build/bdist.linux-x86_64/wheel/cg_lims/EPPs creating build/bdist.linux-x86_64/wheel/cg_lims/EPPs/arnold copying build/lib/cg_lims/EPPs/arnold/__init__.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/arnold copying build/lib/cg_lims/EPPs/arnold/base.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/arnold copying build/lib/cg_lims/EPPs/arnold/flow_cell.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/arnold copying build/lib/cg_lims/EPPs/arnold/prep.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/arnold copying build/lib/cg_lims/EPPs/arnold/sample.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/arnold copying build/lib/cg_lims/EPPs/arnold/sequencing.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/arnold creating build/bdist.linux-x86_64/wheel/cg_lims/EPPs/files creating build/bdist.linux-x86_64/wheel/cg_lims/EPPs/files/csv_for_kapa_truble_shooting copying build/lib/cg_lims/EPPs/files/csv_for_kapa_truble_shooting/__init__.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/files/csv_for_kapa_truble_shooting copying build/lib/cg_lims/EPPs/files/csv_for_kapa_truble_shooting/csv_for_kapa_debug.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/files/csv_for_kapa_truble_shooting copying build/lib/cg_lims/EPPs/files/csv_for_kapa_truble_shooting/models.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/files/csv_for_kapa_truble_shooting creating build/bdist.linux-x86_64/wheel/cg_lims/EPPs/files/hamilton copying build/lib/cg_lims/EPPs/files/hamilton/__init__.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/files/hamilton copying build/lib/cg_lims/EPPs/files/hamilton/base.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/files/hamilton copying build/lib/cg_lims/EPPs/files/hamilton/buffer_exchange_twist_file.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/files/hamilton copying build/lib/cg_lims/EPPs/files/hamilton/make_kapa_csv.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/files/hamilton copying build/lib/cg_lims/EPPs/files/hamilton/models.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/files/hamilton copying build/lib/cg_lims/EPPs/files/hamilton/normalization_file.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/files/hamilton copying build/lib/cg_lims/EPPs/files/hamilton/sars_cov2_prep_file.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/files/hamilton creating build/bdist.linux-x86_64/wheel/cg_lims/EPPs/files/placement_map copying build/lib/cg_lims/EPPs/files/placement_map/__init__.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/files/placement_map copying build/lib/cg_lims/EPPs/files/placement_map/hmtl_templates.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/files/placement_map copying build/lib/cg_lims/EPPs/files/placement_map/make_96well_placement_map.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/files/placement_map copying build/lib/cg_lims/EPPs/files/placement_map/models.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/files/placement_map creating build/bdist.linux-x86_64/wheel/cg_lims/EPPs/files/pooling_map copying build/lib/cg_lims/EPPs/files/pooling_map/__init__.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/files/pooling_map copying build/lib/cg_lims/EPPs/files/pooling_map/hmtl_templates.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/files/pooling_map copying build/lib/cg_lims/EPPs/files/pooling_map/make_pooling_map.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/files/pooling_map copying build/lib/cg_lims/EPPs/files/pooling_map/models.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/files/pooling_map copying build/lib/cg_lims/EPPs/files/__init__.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/files copying build/lib/cg_lims/EPPs/files/barcode_tubes.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/files copying build/lib/cg_lims/EPPs/files/base.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/files copying build/lib/cg_lims/EPPs/files/file_to_udf.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/files creating build/bdist.linux-x86_64/wheel/cg_lims/EPPs/move copying build/lib/cg_lims/EPPs/move/__init__.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/move copying build/lib/cg_lims/EPPs/move/base.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/move copying build/lib/cg_lims/EPPs/move/move_samples.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/move copying build/lib/cg_lims/EPPs/move/place_samples_in_seq_agg.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/move copying build/lib/cg_lims/EPPs/move/rerun_samples.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/move creating build/bdist.linux-x86_64/wheel/cg_lims/EPPs/qc copying build/lib/cg_lims/EPPs/qc/__init__.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/qc copying build/lib/cg_lims/EPPs/qc/base.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/qc copying build/lib/cg_lims/EPPs/qc/set_qc_fail.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/qc creating build/bdist.linux-x86_64/wheel/cg_lims/EPPs/udf creating build/bdist.linux-x86_64/wheel/cg_lims/EPPs/udf/calculate copying build/lib/cg_lims/EPPs/udf/calculate/__init__.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/udf/calculate copying build/lib/cg_lims/EPPs/udf/calculate/base.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/udf/calculate copying build/lib/cg_lims/EPPs/udf/calculate/calculate_amount_ng.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/udf/calculate copying build/lib/cg_lims/EPPs/udf/calculate/calculate_average_size_and_set_qc.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/udf/calculate copying build/lib/cg_lims/EPPs/udf/calculate/calculate_beads.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/udf/calculate copying build/lib/cg_lims/EPPs/udf/calculate/calculate_microbial_aliquot_volumes.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/udf/calculate copying build/lib/cg_lims/EPPs/udf/calculate/calculate_resuspension_buffer_volumes.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/udf/calculate copying build/lib/cg_lims/EPPs/udf/calculate/calculate_water.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/udf/calculate copying build/lib/cg_lims/EPPs/udf/calculate/calculate_water_volume_rna.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/udf/calculate copying build/lib/cg_lims/EPPs/udf/calculate/get_missing_reads.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/udf/calculate copying build/lib/cg_lims/EPPs/udf/calculate/maf_calculate_volume.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/udf/calculate copying build/lib/cg_lims/EPPs/udf/calculate/molar_concentration.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/udf/calculate copying build/lib/cg_lims/EPPs/udf/calculate/sum_missing_reads_in_pool.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/udf/calculate copying build/lib/cg_lims/EPPs/udf/calculate/twist_aliquot_amount.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/udf/calculate copying build/lib/cg_lims/EPPs/udf/calculate/twist_aliquot_volume.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/udf/calculate copying build/lib/cg_lims/EPPs/udf/calculate/twist_get_volumes_from_buffer.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/udf/calculate copying build/lib/cg_lims/EPPs/udf/calculate/twist_pool.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/udf/calculate copying build/lib/cg_lims/EPPs/udf/calculate/twist_qc_amount.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/udf/calculate creating build/bdist.linux-x86_64/wheel/cg_lims/EPPs/udf/check copying build/lib/cg_lims/EPPs/udf/check/__init__.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/udf/check copying build/lib/cg_lims/EPPs/udf/check/base.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/udf/check copying build/lib/cg_lims/EPPs/udf/check/check_artifact_udfs.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/udf/check creating build/bdist.linux-x86_64/wheel/cg_lims/EPPs/udf/copy copying build/lib/cg_lims/EPPs/udf/copy/__init__.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/udf/copy copying build/lib/cg_lims/EPPs/udf/copy/aggregate_qc_flags_and_copy_fields.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/udf/copy copying build/lib/cg_lims/EPPs/udf/copy/artifact_to_artifact.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/udf/copy copying build/lib/cg_lims/EPPs/udf/copy/artifact_to_sample.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/udf/copy copying build/lib/cg_lims/EPPs/udf/copy/base.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/udf/copy copying build/lib/cg_lims/EPPs/udf/copy/measurement_to_analyte.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/udf/copy copying build/lib/cg_lims/EPPs/udf/copy/original_well_to_sample.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/udf/copy copying build/lib/cg_lims/EPPs/udf/copy/process_to_artifact.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/udf/copy copying build/lib/cg_lims/EPPs/udf/copy/process_to_sample.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/udf/copy copying build/lib/cg_lims/EPPs/udf/copy/qc_to_sample.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/udf/copy copying build/lib/cg_lims/EPPs/udf/copy/reads_to_sequence.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/udf/copy copying build/lib/cg_lims/EPPs/udf/copy/sample_to_artifact.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/udf/copy creating build/bdist.linux-x86_64/wheel/cg_lims/EPPs/udf/set copying build/lib/cg_lims/EPPs/udf/set/__init__.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/udf/set copying build/lib/cg_lims/EPPs/udf/set/base.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/udf/set copying build/lib/cg_lims/EPPs/udf/set/set_barcode.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/udf/set copying build/lib/cg_lims/EPPs/udf/set/set_method.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/udf/set copying build/lib/cg_lims/EPPs/udf/set/set_sample_date.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/udf/set copying build/lib/cg_lims/EPPs/udf/set/set_samples_reads_missing.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/udf/set copying build/lib/cg_lims/EPPs/udf/__init__.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/udf copying build/lib/cg_lims/EPPs/udf/base.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs/udf copying build/lib/cg_lims/EPPs/__init__.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs copying build/lib/cg_lims/EPPs/base.py -> build/bdist.linux-x86_64/wheel/cg_lims/EPPs creating build/bdist.linux-x86_64/wheel/cg_lims/commands copying build/lib/cg_lims/commands/__init__.py -> build/bdist.linux-x86_64/wheel/cg_lims/commands copying build/lib/cg_lims/commands/base.py -> build/bdist.linux-x86_64/wheel/cg_lims/commands creating build/bdist.linux-x86_64/wheel/cg_lims/files copying build/lib/cg_lims/files/__init__.py -> build/bdist.linux-x86_64/wheel/cg_lims/files copying build/lib/cg_lims/files/manage_csv_files.py -> build/bdist.linux-x86_64/wheel/cg_lims/files creating build/bdist.linux-x86_64/wheel/cg_lims/get copying build/lib/cg_lims/get/__init__.py -> build/bdist.linux-x86_64/wheel/cg_lims/get copying build/lib/cg_lims/get/artifacts.py -> build/bdist.linux-x86_64/wheel/cg_lims/get copying build/lib/cg_lims/get/fields.py -> build/bdist.linux-x86_64/wheel/cg_lims/get copying build/lib/cg_lims/get/files.py -> build/bdist.linux-x86_64/wheel/cg_lims/get copying build/lib/cg_lims/get/ids.py -> build/bdist.linux-x86_64/wheel/cg_lims/get copying build/lib/cg_lims/get/processes.py -> build/bdist.linux-x86_64/wheel/cg_lims/get copying build/lib/cg_lims/get/samples.py -> build/bdist.linux-x86_64/wheel/cg_lims/get copying build/lib/cg_lims/get/udfs.py -> build/bdist.linux-x86_64/wheel/cg_lims/get creating build/bdist.linux-x86_64/wheel/cg_lims/models creating build/bdist.linux-x86_64/wheel/cg_lims/models/api creating build/bdist.linux-x86_64/wheel/cg_lims/models/api/master_steps copying build/lib/cg_lims/models/api/master_steps/__init__.py -> build/bdist.linux-x86_64/wheel/cg_lims/models/api/master_steps copying build/lib/cg_lims/models/api/master_steps/aliquot_samples_for_enzymatic_fragmentation_twist.py -> build/bdist.linux-x86_64/wheel/cg_lims/models/api/master_steps copying build/lib/cg_lims/models/api/master_steps/base_step.py -> build/bdist.linux-x86_64/wheel/cg_lims/models/api/master_steps copying build/lib/cg_lims/models/api/master_steps/bead_purification_twist_v2.py -> build/bdist.linux-x86_64/wheel/cg_lims/models/api/master_steps copying build/lib/cg_lims/models/api/master_steps/buffer_exchange_v2.py -> build/bdist.linux-x86_64/wheel/cg_lims/models/api/master_steps copying build/lib/cg_lims/models/api/master_steps/capture_and_wash_twist_v2.py -> build/bdist.linux-x86_64/wheel/cg_lims/models/api/master_steps copying build/lib/cg_lims/models/api/master_steps/hybridize_library_twist_v2.py -> build/bdist.linux-x86_64/wheel/cg_lims/models/api/master_steps copying build/lib/cg_lims/models/api/master_steps/kapa_library_preparation_twist_v1.py -> build/bdist.linux-x86_64/wheel/cg_lims/models/api/master_steps copying build/lib/cg_lims/models/api/master_steps/pool_samples_twist_v2.py -> build/bdist.linux-x86_64/wheel/cg_lims/models/api/master_steps copying build/lib/cg_lims/models/api/__init__.py -> build/bdist.linux-x86_64/wheel/cg_lims/models/api copying build/lib/cg_lims/models/api/sample.py -> build/bdist.linux-x86_64/wheel/cg_lims/models/api creating build/bdist.linux-x86_64/wheel/cg_lims/models/arnold creating build/bdist.linux-x86_64/wheel/cg_lims/models/arnold/prep creating build/bdist.linux-x86_64/wheel/cg_lims/models/arnold/prep/microbial_prep copying build/lib/cg_lims/models/arnold/prep/microbial_prep/__init__.py -> build/bdist.linux-x86_64/wheel/cg_lims/models/arnold/prep/microbial_prep copying build/lib/cg_lims/models/arnold/prep/microbial_prep/buffer_exchange.py -> build/bdist.linux-x86_64/wheel/cg_lims/models/arnold/prep/microbial_prep copying build/lib/cg_lims/models/arnold/prep/microbial_prep/microbial_library_prep_nextera.py -> build/bdist.linux-x86_64/wheel/cg_lims/models/arnold/prep/microbial_prep copying build/lib/cg_lims/models/arnold/prep/microbial_prep/normailzation_of_microbial_samples_for_sequencing.py -> build/bdist.linux-x86_64/wheel/cg_lims/models/arnold/prep/microbial_prep copying build/lib/cg_lims/models/arnold/prep/microbial_prep/normalization_of_microbial_samples.py -> build/bdist.linux-x86_64/wheel/cg_lims/models/arnold/prep/microbial_prep copying build/lib/cg_lims/models/arnold/prep/microbial_prep/post_pcr_bead_purification.py -> build/bdist.linux-x86_64/wheel/cg_lims/models/arnold/prep/microbial_prep copying build/lib/cg_lims/models/arnold/prep/microbial_prep/reception_control.py -> build/bdist.linux-x86_64/wheel/cg_lims/models/arnold/prep/microbial_prep creating build/bdist.linux-x86_64/wheel/cg_lims/models/arnold/prep/rna copying build/lib/cg_lims/models/arnold/prep/rna/__init__.py -> build/bdist.linux-x86_64/wheel/cg_lims/models/arnold/prep/rna copying build/lib/cg_lims/models/arnold/prep/rna/a_tailing_and_adapter_ligation.py -> build/bdist.linux-x86_64/wheel/cg_lims/models/arnold/prep/rna copying build/lib/cg_lims/models/arnold/prep/rna/aliquot_samples_for_fragmentation.py -> build/bdist.linux-x86_64/wheel/cg_lims/models/arnold/prep/rna copying build/lib/cg_lims/models/arnold/prep/rna/normalization_of_samples_for_sequencing.py -> build/bdist.linux-x86_64/wheel/cg_lims/models/arnold/prep/rna copying build/lib/cg_lims/models/arnold/prep/rna/reception_control.py -> build/bdist.linux-x86_64/wheel/cg_lims/models/arnold/prep/rna creating build/bdist.linux-x86_64/wheel/cg_lims/models/arnold/prep/sars_cov_2_prep copying build/lib/cg_lims/models/arnold/prep/sars_cov_2_prep/__init__.py -> build/bdist.linux-x86_64/wheel/cg_lims/models/arnold/prep/sars_cov_2_prep copying build/lib/cg_lims/models/arnold/prep/sars_cov_2_prep/library_preparation.py -> build/bdist.linux-x86_64/wheel/cg_lims/models/arnold/prep/sars_cov_2_prep copying build/lib/cg_lims/models/arnold/prep/sars_cov_2_prep/pooling_and_cleanup.py -> build/bdist.linux-x86_64/wheel/cg_lims/models/arnold/prep/sars_cov_2_prep copying build/lib/cg_lims/models/arnold/prep/sars_cov_2_prep/reception_control.py -> build/bdist.linux-x86_64/wheel/cg_lims/models/arnold/prep/sars_cov_2_prep creating build/bdist.linux-x86_64/wheel/cg_lims/models/arnold/prep/twist copying build/lib/cg_lims/models/arnold/prep/twist/__init__.py -> build/bdist.linux-x86_64/wheel/cg_lims/models/arnold/prep/twist copying build/lib/cg_lims/models/arnold/prep/twist/aliquot_samples_for_enzymatic_fragmentation_twist.py -> build/bdist.linux-x86_64/wheel/cg_lims/models/arnold/prep/twist copying build/lib/cg_lims/models/arnold/prep/twist/amplify_captured_libraries.py -> build/bdist.linux-x86_64/wheel/cg_lims/models/arnold/prep/twist copying build/lib/cg_lims/models/arnold/prep/twist/bead_purification_twist.py -> build/bdist.linux-x86_64/wheel/cg_lims/models/arnold/prep/twist copying build/lib/cg_lims/models/arnold/prep/twist/buffer_exchange.py -> build/bdist.linux-x86_64/wheel/cg_lims/models/arnold/prep/twist copying build/lib/cg_lims/models/arnold/prep/twist/capture_and_wash_twist.py -> build/bdist.linux-x86_64/wheel/cg_lims/models/arnold/prep/twist copying build/lib/cg_lims/models/arnold/prep/twist/enzymatic_fragmentation_twist.py -> build/bdist.linux-x86_64/wheel/cg_lims/models/arnold/prep/twist copying build/lib/cg_lims/models/arnold/prep/twist/hybridize_library_twist.py -> build/bdist.linux-x86_64/wheel/cg_lims/models/arnold/prep/twist copying build/lib/cg_lims/models/arnold/prep/twist/kapa_library_preparation_twist.py -> build/bdist.linux-x86_64/wheel/cg_lims/models/arnold/prep/twist copying build/lib/cg_lims/models/arnold/prep/twist/normalization_of_samples_for_sequencing.py -> build/bdist.linux-x86_64/wheel/cg_lims/models/arnold/prep/twist copying build/lib/cg_lims/models/arnold/prep/twist/pool_samples_twist.py -> build/bdist.linux-x86_64/wheel/cg_lims/models/arnold/prep/twist copying build/lib/cg_lims/models/arnold/prep/twist/reception_control.py -> build/bdist.linux-x86_64/wheel/cg_lims/models/arnold/prep/twist creating build/bdist.linux-x86_64/wheel/cg_lims/models/arnold/prep/wgs copying build/lib/cg_lims/models/arnold/prep/wgs/__init__.py -> build/bdist.linux-x86_64/wheel/cg_lims/models/arnold/prep/wgs copying build/lib/cg_lims/models/arnold/prep/wgs/aliquot_sampels_for_covaris.py -> build/bdist.linux-x86_64/wheel/cg_lims/models/arnold/prep/wgs copying build/lib/cg_lims/models/arnold/prep/wgs/endrepair_size_selection_a_tailing_adapter_ligation.py -> build/bdist.linux-x86_64/wheel/cg_lims/models/arnold/prep/wgs copying build/lib/cg_lims/models/arnold/prep/wgs/fragment_dna_truseq_dna.py -> build/bdist.linux-x86_64/wheel/cg_lims/models/arnold/prep/wgs copying build/lib/cg_lims/models/arnold/prep/wgs/reception_control.py -> build/bdist.linux-x86_64/wheel/cg_lims/models/arnold/prep/wgs copying build/lib/cg_lims/models/arnold/prep/__init__.py -> build/bdist.linux-x86_64/wheel/cg_lims/models/arnold/prep creating build/bdist.linux-x86_64/wheel/cg_lims/models/arnold/sequencing copying build/lib/cg_lims/models/arnold/sequencing/__init__.py -> build/bdist.linux-x86_64/wheel/cg_lims/models/arnold/sequencing copying build/lib/cg_lims/models/arnold/sequencing/bcl_conversion_and_demultiplexing.py -> build/bdist.linux-x86_64/wheel/cg_lims/models/arnold/sequencing copying build/lib/cg_lims/models/arnold/sequencing/define_run_format.py -> build/bdist.linux-x86_64/wheel/cg_lims/models/arnold/sequencing copying build/lib/cg_lims/models/arnold/sequencing/standard_make_pool_and_denature.py -> build/bdist.linux-x86_64/wheel/cg_lims/models/arnold/sequencing copying build/lib/cg_lims/models/arnold/sequencing/standard_prepare_for_sequencing.py -> build/bdist.linux-x86_64/wheel/cg_lims/models/arnold/sequencing copying build/lib/cg_lims/models/arnold/sequencing/xp_denature_and_examp.py -> build/bdist.linux-x86_64/wheel/cg_lims/models/arnold/sequencing copying build/lib/cg_lims/models/arnold/sequencing/xp_load_to_flowcell.py -> build/bdist.linux-x86_64/wheel/cg_lims/models/arnold/sequencing copying build/lib/cg_lims/models/arnold/__init__.py -> build/bdist.linux-x86_64/wheel/cg_lims/models/arnold copying build/lib/cg_lims/models/arnold/base_step.py -> build/bdist.linux-x86_64/wheel/cg_lims/models/arnold copying build/lib/cg_lims/models/arnold/flow_cell.py -> build/bdist.linux-x86_64/wheel/cg_lims/models/arnold copying build/lib/cg_lims/models/arnold/sample.py -> build/bdist.linux-x86_64/wheel/cg_lims/models/arnold copying build/lib/cg_lims/models/__init__.py -> build/bdist.linux-x86_64/wheel/cg_lims/models copying build/lib/cg_lims/models/context.py -> build/bdist.linux-x86_64/wheel/cg_lims/models creating build/bdist.linux-x86_64/wheel/cg_lims/put copying build/lib/cg_lims/put/__init__.py -> build/bdist.linux-x86_64/wheel/cg_lims/put copying build/lib/cg_lims/put/queue.py -> build/bdist.linux-x86_64/wheel/cg_lims/put creating build/bdist.linux-x86_64/wheel/cg_lims/scripts creating build/bdist.linux-x86_64/wheel/cg_lims/scripts/one_time_scripts copying build/lib/cg_lims/scripts/one_time_scripts/__init__.py -> build/bdist.linux-x86_64/wheel/cg_lims/scripts/one_time_scripts copying build/lib/cg_lims/scripts/one_time_scripts/add_sample_meta_data.py -> build/bdist.linux-x86_64/wheel/cg_lims/scripts/one_time_scripts copying build/lib/cg_lims/scripts/one_time_scripts/base.py -> build/bdist.linux-x86_64/wheel/cg_lims/scripts/one_time_scripts copying build/lib/cg_lims/scripts/one_time_scripts/load_arnold_flowcells.py -> build/bdist.linux-x86_64/wheel/cg_lims/scripts/one_time_scripts copying build/lib/cg_lims/scripts/one_time_scripts/load_arnold_steps.py -> build/bdist.linux-x86_64/wheel/cg_lims/scripts/one_time_scripts copying build/lib/cg_lims/scripts/one_time_scripts/process_to_artifact.py -> build/bdist.linux-x86_64/wheel/cg_lims/scripts/one_time_scripts copying build/lib/cg_lims/scripts/__init__.py -> build/bdist.linux-x86_64/wheel/cg_lims/scripts copying build/lib/cg_lims/scripts/base.py -> build/bdist.linux-x86_64/wheel/cg_lims/scripts copying build/lib/cg_lims/scripts/check_config.py -> build/bdist.linux-x86_64/wheel/cg_lims/scripts copying build/lib/cg_lims/scripts/fetch_sample_info.py -> build/bdist.linux-x86_64/wheel/cg_lims/scripts copying build/lib/cg_lims/scripts/prepare_fixture.py -> build/bdist.linux-x86_64/wheel/cg_lims/scripts creating build/bdist.linux-x86_64/wheel/cg_lims/set copying build/lib/cg_lims/set/__init__.py -> build/bdist.linux-x86_64/wheel/cg_lims/set copying build/lib/cg_lims/set/qc.py -> build/bdist.linux-x86_64/wheel/cg_lims/set copying build/lib/cg_lims/set/udfs.py -> build/bdist.linux-x86_64/wheel/cg_lims/set copying build/lib/cg_lims/__init__.py -> build/bdist.linux-x86_64/wheel/cg_lims copying build/lib/cg_lims/exceptions.py -> build/bdist.linux-x86_64/wheel/cg_lims copying build/lib/cg_lims/objects.py -> build/bdist.linux-x86_64/wheel/cg_lims copying build/lib/cg_lims/options.py -> build/bdist.linux-x86_64/wheel/cg_lims copying build/lib/cg_lims/status_db_api.py -> build/bdist.linux-x86_64/wheel/cg_lims creating build/bdist.linux-x86_64/wheel/tests creating build/bdist.linux-x86_64/wheel/tests/EPPs creating build/bdist.linux-x86_64/wheel/tests/EPPs/arnold copying build/lib/tests/EPPs/arnold/__init__.py -> build/bdist.linux-x86_64/wheel/tests/EPPs/arnold copying build/lib/tests/EPPs/arnold/test_arnold_covid_prep.py -> build/bdist.linux-x86_64/wheel/tests/EPPs/arnold copying build/lib/tests/EPPs/arnold/test_arnold_load_flowcell.py -> build/bdist.linux-x86_64/wheel/tests/EPPs/arnold copying build/lib/tests/EPPs/arnold/test_arnold_microbial_prep.py -> build/bdist.linux-x86_64/wheel/tests/EPPs/arnold copying build/lib/tests/EPPs/arnold/test_arnold_novaseq_standard.py -> build/bdist.linux-x86_64/wheel/tests/EPPs/arnold copying build/lib/tests/EPPs/arnold/test_arnold_twist_prep.py -> build/bdist.linux-x86_64/wheel/tests/EPPs/arnold copying build/lib/tests/EPPs/arnold/test_arnold_wgs_prep.py -> build/bdist.linux-x86_64/wheel/tests/EPPs/arnold creating build/bdist.linux-x86_64/wheel/tests/EPPs/files copying build/lib/tests/EPPs/files/__init__.py -> build/bdist.linux-x86_64/wheel/tests/EPPs/files copying build/lib/tests/EPPs/files/test_barcode_tubes.py -> build/bdist.linux-x86_64/wheel/tests/EPPs/files copying build/lib/tests/EPPs/files/test_buffer_exchange_twist_file.py -> build/bdist.linux-x86_64/wheel/tests/EPPs/files copying build/lib/tests/EPPs/files/test_hamilton_normalization_file.py -> build/bdist.linux-x86_64/wheel/tests/EPPs/files copying build/lib/tests/EPPs/files/test_make_kapa_csv.py -> build/bdist.linux-x86_64/wheel/tests/EPPs/files copying build/lib/tests/EPPs/files/test_sars_cov2_prep_file.py -> build/bdist.linux-x86_64/wheel/tests/EPPs/files creating build/bdist.linux-x86_64/wheel/tests/EPPs/udf creating build/bdist.linux-x86_64/wheel/tests/EPPs/udf/calculate copying build/lib/tests/EPPs/udf/calculate/__init__.py -> build/bdist.linux-x86_64/wheel/tests/EPPs/udf/calculate copying build/lib/tests/EPPs/udf/calculate/test_calculate_average_size_and_set_qc.py -> build/bdist.linux-x86_64/wheel/tests/EPPs/udf/calculate copying build/lib/tests/EPPs/udf/calculate/test_calculate_beads.py -> build/bdist.linux-x86_64/wheel/tests/EPPs/udf/calculate copying build/lib/tests/EPPs/udf/calculate/test_calculate_microbial_aliquot_volumes.py -> build/bdist.linux-x86_64/wheel/tests/EPPs/udf/calculate copying build/lib/tests/EPPs/udf/calculate/test_calculate_resuspension_buffer_volumes.py -> build/bdist.linux-x86_64/wheel/tests/EPPs/udf/calculate copying build/lib/tests/EPPs/udf/calculate/test_calculate_water_volume_rna.py -> build/bdist.linux-x86_64/wheel/tests/EPPs/udf/calculate copying build/lib/tests/EPPs/udf/calculate/test_find_reads_to_sequence.py -> build/bdist.linux-x86_64/wheel/tests/EPPs/udf/calculate copying build/lib/tests/EPPs/udf/calculate/test_maf_calculate_volume.py -> build/bdist.linux-x86_64/wheel/tests/EPPs/udf/calculate copying build/lib/tests/EPPs/udf/calculate/test_sum_missing_reads_in_pool.py -> build/bdist.linux-x86_64/wheel/tests/EPPs/udf/calculate copying build/lib/tests/EPPs/udf/calculate/test_twist_qc_amount.py -> build/bdist.linux-x86_64/wheel/tests/EPPs/udf/calculate creating build/bdist.linux-x86_64/wheel/tests/EPPs/udf/check copying build/lib/tests/EPPs/udf/check/__init__.py -> build/bdist.linux-x86_64/wheel/tests/EPPs/udf/check copying build/lib/tests/EPPs/udf/check/test_check_artifact_udfs.py -> build/bdist.linux-x86_64/wheel/tests/EPPs/udf/check creating build/bdist.linux-x86_64/wheel/tests/EPPs/udf/copy copying build/lib/tests/EPPs/udf/copy/__init__.py -> build/bdist.linux-x86_64/wheel/tests/EPPs/udf/copy copying build/lib/tests/EPPs/udf/copy/test_aggregate_qc_flags_and_copy_fields.py -> build/bdist.linux-x86_64/wheel/tests/EPPs/udf/copy copying build/lib/tests/EPPs/udf/copy/test_artifact_to_artifact.py -> build/bdist.linux-x86_64/wheel/tests/EPPs/udf/copy copying build/lib/tests/EPPs/udf/copy/test_measurement_to_analyte.py -> build/bdist.linux-x86_64/wheel/tests/EPPs/udf/copy copying build/lib/tests/EPPs/udf/copy/test_original_position.py -> build/bdist.linux-x86_64/wheel/tests/EPPs/udf/copy creating build/bdist.linux-x86_64/wheel/tests/EPPs/udf/set copying build/lib/tests/EPPs/udf/set/__init__.py -> build/bdist.linux-x86_64/wheel/tests/EPPs/udf/set copying build/lib/tests/EPPs/udf/set/test_qc_to_sample.py -> build/bdist.linux-x86_64/wheel/tests/EPPs/udf/set copying build/lib/tests/EPPs/udf/set/test_set_barcode.py -> build/bdist.linux-x86_64/wheel/tests/EPPs/udf/set copying build/lib/tests/EPPs/udf/set/test_set_dates.py -> build/bdist.linux-x86_64/wheel/tests/EPPs/udf/set copying build/lib/tests/EPPs/udf/set/test_set_method.py -> build/bdist.linux-x86_64/wheel/tests/EPPs/udf/set copying build/lib/tests/EPPs/udf/set/test_set_samples_reads_missing.py -> build/bdist.linux-x86_64/wheel/tests/EPPs/udf/set copying build/lib/tests/EPPs/udf/__init__.py -> build/bdist.linux-x86_64/wheel/tests/EPPs/udf copying build/lib/tests/EPPs/__init__.py -> build/bdist.linux-x86_64/wheel/tests/EPPs creating build/bdist.linux-x86_64/wheel/tests/get copying build/lib/tests/get/__init__.py -> build/bdist.linux-x86_64/wheel/tests/get copying build/lib/tests/get/test_artifacts.py -> build/bdist.linux-x86_64/wheel/tests/get copying build/lib/tests/get/test_udfs.py -> build/bdist.linux-x86_64/wheel/tests/get copying build/lib/tests/__init__.py -> build/bdist.linux-x86_64/wheel/tests copying build/lib/tests/conftest.py -> build/bdist.linux-x86_64/wheel/tests running install_egg_info Copying cg_lims.egg-info to build/bdist.linux-x86_64/wheel/cg_lims-6.8.0-py3.11.egg-info running install_scripts creating build/bdist.linux-x86_64/wheel/cg_lims-6.8.0.dist-info/WHEEL creating '/builddir/build/BUILD/cg_lims-6.8.0/.pyproject-builddir/pip-wheel-d23j1zl5/.tmp-q8ft1fbv/cg_lims-6.8.0-py3-none-any.whl' and adding 'build/bdist.linux-x86_64/wheel' to it adding 'cg_lims/__init__.py' adding 'cg_lims/exceptions.py' adding 'cg_lims/objects.py' adding 'cg_lims/options.py' adding 'cg_lims/status_db_api.py' adding 'cg_lims/EPPs/__init__.py' adding 'cg_lims/EPPs/base.py' adding 'cg_lims/EPPs/arnold/__init__.py' adding 'cg_lims/EPPs/arnold/base.py' adding 'cg_lims/EPPs/arnold/flow_cell.py' adding 'cg_lims/EPPs/arnold/prep.py' adding 'cg_lims/EPPs/arnold/sample.py' adding 'cg_lims/EPPs/arnold/sequencing.py' adding 'cg_lims/EPPs/files/__init__.py' adding 'cg_lims/EPPs/files/barcode_tubes.py' adding 'cg_lims/EPPs/files/base.py' adding 'cg_lims/EPPs/files/file_to_udf.py' adding 'cg_lims/EPPs/files/csv_for_kapa_truble_shooting/__init__.py' adding 'cg_lims/EPPs/files/csv_for_kapa_truble_shooting/csv_for_kapa_debug.py' adding 'cg_lims/EPPs/files/csv_for_kapa_truble_shooting/models.py' adding 'cg_lims/EPPs/files/hamilton/__init__.py' adding 'cg_lims/EPPs/files/hamilton/base.py' adding 'cg_lims/EPPs/files/hamilton/buffer_exchange_twist_file.py' adding 'cg_lims/EPPs/files/hamilton/make_kapa_csv.py' adding 'cg_lims/EPPs/files/hamilton/models.py' adding 'cg_lims/EPPs/files/hamilton/normalization_file.py' adding 'cg_lims/EPPs/files/hamilton/sars_cov2_prep_file.py' adding 'cg_lims/EPPs/files/placement_map/__init__.py' adding 'cg_lims/EPPs/files/placement_map/hmtl_templates.py' adding 'cg_lims/EPPs/files/placement_map/make_96well_placement_map.py' adding 'cg_lims/EPPs/files/placement_map/models.py' adding 'cg_lims/EPPs/files/pooling_map/__init__.py' adding 'cg_lims/EPPs/files/pooling_map/hmtl_templates.py' adding 'cg_lims/EPPs/files/pooling_map/make_pooling_map.py' adding 'cg_lims/EPPs/files/pooling_map/models.py' adding 'cg_lims/EPPs/move/__init__.py' adding 'cg_lims/EPPs/move/base.py' adding 'cg_lims/EPPs/move/move_samples.py' adding 'cg_lims/EPPs/move/place_samples_in_seq_agg.py' adding 'cg_lims/EPPs/move/rerun_samples.py' adding 'cg_lims/EPPs/qc/__init__.py' adding 'cg_lims/EPPs/qc/base.py' adding 'cg_lims/EPPs/qc/set_qc_fail.py' adding 'cg_lims/EPPs/udf/__init__.py' adding 'cg_lims/EPPs/udf/base.py' adding 'cg_lims/EPPs/udf/calculate/__init__.py' adding 'cg_lims/EPPs/udf/calculate/base.py' adding 'cg_lims/EPPs/udf/calculate/calculate_amount_ng.py' adding 'cg_lims/EPPs/udf/calculate/calculate_average_size_and_set_qc.py' adding 'cg_lims/EPPs/udf/calculate/calculate_beads.py' adding 'cg_lims/EPPs/udf/calculate/calculate_microbial_aliquot_volumes.py' adding 'cg_lims/EPPs/udf/calculate/calculate_resuspension_buffer_volumes.py' adding 'cg_lims/EPPs/udf/calculate/calculate_water.py' adding 'cg_lims/EPPs/udf/calculate/calculate_water_volume_rna.py' adding 'cg_lims/EPPs/udf/calculate/get_missing_reads.py' adding 'cg_lims/EPPs/udf/calculate/maf_calculate_volume.py' adding 'cg_lims/EPPs/udf/calculate/molar_concentration.py' adding 'cg_lims/EPPs/udf/calculate/sum_missing_reads_in_pool.py' adding 'cg_lims/EPPs/udf/calculate/twist_aliquot_amount.py' adding 'cg_lims/EPPs/udf/calculate/twist_aliquot_volume.py' adding 'cg_lims/EPPs/udf/calculate/twist_get_volumes_from_buffer.py' adding 'cg_lims/EPPs/udf/calculate/twist_pool.py' adding 'cg_lims/EPPs/udf/calculate/twist_qc_amount.py' adding 'cg_lims/EPPs/udf/check/__init__.py' adding 'cg_lims/EPPs/udf/check/base.py' adding 'cg_lims/EPPs/udf/check/check_artifact_udfs.py' adding 'cg_lims/EPPs/udf/copy/__init__.py' adding 'cg_lims/EPPs/udf/copy/aggregate_qc_flags_and_copy_fields.py' adding 'cg_lims/EPPs/udf/copy/artifact_to_artifact.py' adding 'cg_lims/EPPs/udf/copy/artifact_to_sample.py' adding 'cg_lims/EPPs/udf/copy/base.py' adding 'cg_lims/EPPs/udf/copy/measurement_to_analyte.py' adding 'cg_lims/EPPs/udf/copy/original_well_to_sample.py' adding 'cg_lims/EPPs/udf/copy/process_to_artifact.py' adding 'cg_lims/EPPs/udf/copy/process_to_sample.py' adding 'cg_lims/EPPs/udf/copy/qc_to_sample.py' adding 'cg_lims/EPPs/udf/copy/reads_to_sequence.py' adding 'cg_lims/EPPs/udf/copy/sample_to_artifact.py' adding 'cg_lims/EPPs/udf/set/__init__.py' adding 'cg_lims/EPPs/udf/set/base.py' adding 'cg_lims/EPPs/udf/set/set_barcode.py' adding 'cg_lims/EPPs/udf/set/set_method.py' adding 'cg_lims/EPPs/udf/set/set_sample_date.py' adding 'cg_lims/EPPs/udf/set/set_samples_reads_missing.py' adding 'cg_lims/commands/__init__.py' adding 'cg_lims/commands/base.py' adding 'cg_lims/files/__init__.py' adding 'cg_lims/files/manage_csv_files.py' adding 'cg_lims/get/__init__.py' adding 'cg_lims/get/artifacts.py' adding 'cg_lims/get/fields.py' adding 'cg_lims/get/files.py' adding 'cg_lims/get/ids.py' adding 'cg_lims/get/processes.py' adding 'cg_lims/get/samples.py' adding 'cg_lims/get/udfs.py' adding 'cg_lims/models/__init__.py' adding 'cg_lims/models/context.py' adding 'cg_lims/models/api/__init__.py' adding 'cg_lims/models/api/sample.py' adding 'cg_lims/models/api/master_steps/__init__.py' adding 'cg_lims/models/api/master_steps/aliquot_samples_for_enzymatic_fragmentation_twist.py' adding 'cg_lims/models/api/master_steps/base_step.py' adding 'cg_lims/models/api/master_steps/bead_purification_twist_v2.py' adding 'cg_lims/models/api/master_steps/buffer_exchange_v2.py' adding 'cg_lims/models/api/master_steps/capture_and_wash_twist_v2.py' adding 'cg_lims/models/api/master_steps/hybridize_library_twist_v2.py' adding 'cg_lims/models/api/master_steps/kapa_library_preparation_twist_v1.py' adding 'cg_lims/models/api/master_steps/pool_samples_twist_v2.py' adding 'cg_lims/models/arnold/__init__.py' adding 'cg_lims/models/arnold/base_step.py' adding 'cg_lims/models/arnold/flow_cell.py' adding 'cg_lims/models/arnold/sample.py' adding 'cg_lims/models/arnold/prep/__init__.py' adding 'cg_lims/models/arnold/prep/microbial_prep/__init__.py' adding 'cg_lims/models/arnold/prep/microbial_prep/buffer_exchange.py' adding 'cg_lims/models/arnold/prep/microbial_prep/microbial_library_prep_nextera.py' adding 'cg_lims/models/arnold/prep/microbial_prep/normailzation_of_microbial_samples_for_sequencing.py' adding 'cg_lims/models/arnold/prep/microbial_prep/normalization_of_microbial_samples.py' adding 'cg_lims/models/arnold/prep/microbial_prep/post_pcr_bead_purification.py' adding 'cg_lims/models/arnold/prep/microbial_prep/reception_control.py' adding 'cg_lims/models/arnold/prep/rna/__init__.py' adding 'cg_lims/models/arnold/prep/rna/a_tailing_and_adapter_ligation.py' adding 'cg_lims/models/arnold/prep/rna/aliquot_samples_for_fragmentation.py' adding 'cg_lims/models/arnold/prep/rna/normalization_of_samples_for_sequencing.py' adding 'cg_lims/models/arnold/prep/rna/reception_control.py' adding 'cg_lims/models/arnold/prep/sars_cov_2_prep/__init__.py' adding 'cg_lims/models/arnold/prep/sars_cov_2_prep/library_preparation.py' adding 'cg_lims/models/arnold/prep/sars_cov_2_prep/pooling_and_cleanup.py' adding 'cg_lims/models/arnold/prep/sars_cov_2_prep/reception_control.py' adding 'cg_lims/models/arnold/prep/twist/__init__.py' adding 'cg_lims/models/arnold/prep/twist/aliquot_samples_for_enzymatic_fragmentation_twist.py' adding 'cg_lims/models/arnold/prep/twist/amplify_captured_libraries.py' adding 'cg_lims/models/arnold/prep/twist/bead_purification_twist.py' adding 'cg_lims/models/arnold/prep/twist/buffer_exchange.py' adding 'cg_lims/models/arnold/prep/twist/capture_and_wash_twist.py' adding 'cg_lims/models/arnold/prep/twist/enzymatic_fragmentation_twist.py' adding 'cg_lims/models/arnold/prep/twist/hybridize_library_twist.py' adding 'cg_lims/models/arnold/prep/twist/kapa_library_preparation_twist.py' adding 'cg_lims/models/arnold/prep/twist/normalization_of_samples_for_sequencing.py' adding 'cg_lims/models/arnold/prep/twist/pool_samples_twist.py' adding 'cg_lims/models/arnold/prep/twist/reception_control.py' adding 'cg_lims/models/arnold/prep/wgs/__init__.py' adding 'cg_lims/models/arnold/prep/wgs/aliquot_sampels_for_covaris.py' adding 'cg_lims/models/arnold/prep/wgs/endrepair_size_selection_a_tailing_adapter_ligation.py' adding 'cg_lims/models/arnold/prep/wgs/fragment_dna_truseq_dna.py' adding 'cg_lims/models/arnold/prep/wgs/reception_control.py' adding 'cg_lims/models/arnold/sequencing/__init__.py' adding 'cg_lims/models/arnold/sequencing/bcl_conversion_and_demultiplexing.py' adding 'cg_lims/models/arnold/sequencing/define_run_format.py' adding 'cg_lims/models/arnold/sequencing/standard_make_pool_and_denature.py' adding 'cg_lims/models/arnold/sequencing/standard_prepare_for_sequencing.py' adding 'cg_lims/models/arnold/sequencing/xp_denature_and_examp.py' adding 'cg_lims/models/arnold/sequencing/xp_load_to_flowcell.py' adding 'cg_lims/put/__init__.py' adding 'cg_lims/put/queue.py' adding 'cg_lims/scripts/__init__.py' adding 'cg_lims/scripts/base.py' adding 'cg_lims/scripts/check_config.py' adding 'cg_lims/scripts/fetch_sample_info.py' adding 'cg_lims/scripts/prepare_fixture.py' adding 'cg_lims/scripts/one_time_scripts/__init__.py' adding 'cg_lims/scripts/one_time_scripts/add_sample_meta_data.py' adding 'cg_lims/scripts/one_time_scripts/base.py' adding 'cg_lims/scripts/one_time_scripts/load_arnold_flowcells.py' adding 'cg_lims/scripts/one_time_scripts/load_arnold_steps.py' adding 'cg_lims/scripts/one_time_scripts/process_to_artifact.py' adding 'cg_lims/set/__init__.py' adding 'cg_lims/set/qc.py' adding 'cg_lims/set/udfs.py' adding 'tests/__init__.py' adding 'tests/conftest.py' adding 'tests/EPPs/__init__.py' adding 'tests/EPPs/arnold/__init__.py' adding 'tests/EPPs/arnold/test_arnold_covid_prep.py' adding 'tests/EPPs/arnold/test_arnold_load_flowcell.py' adding 'tests/EPPs/arnold/test_arnold_microbial_prep.py' adding 'tests/EPPs/arnold/test_arnold_novaseq_standard.py' adding 'tests/EPPs/arnold/test_arnold_twist_prep.py' adding 'tests/EPPs/arnold/test_arnold_wgs_prep.py' adding 'tests/EPPs/files/__init__.py' adding 'tests/EPPs/files/test_barcode_tubes.py' adding 'tests/EPPs/files/test_buffer_exchange_twist_file.py' adding 'tests/EPPs/files/test_hamilton_normalization_file.py' adding 'tests/EPPs/files/test_make_kapa_csv.py' adding 'tests/EPPs/files/test_sars_cov2_prep_file.py' adding 'tests/EPPs/udf/__init__.py' adding 'tests/EPPs/udf/calculate/__init__.py' adding 'tests/EPPs/udf/calculate/test_calculate_average_size_and_set_qc.py' adding 'tests/EPPs/udf/calculate/test_calculate_beads.py' adding 'tests/EPPs/udf/calculate/test_calculate_microbial_aliquot_volumes.py' adding 'tests/EPPs/udf/calculate/test_calculate_resuspension_buffer_volumes.py' adding 'tests/EPPs/udf/calculate/test_calculate_water_volume_rna.py' adding 'tests/EPPs/udf/calculate/test_find_reads_to_sequence.py' adding 'tests/EPPs/udf/calculate/test_maf_calculate_volume.py' adding 'tests/EPPs/udf/calculate/test_sum_missing_reads_in_pool.py' adding 'tests/EPPs/udf/calculate/test_twist_qc_amount.py' adding 'tests/EPPs/udf/check/__init__.py' adding 'tests/EPPs/udf/check/test_check_artifact_udfs.py' adding 'tests/EPPs/udf/copy/__init__.py' adding 'tests/EPPs/udf/copy/test_aggregate_qc_flags_and_copy_fields.py' adding 'tests/EPPs/udf/copy/test_artifact_to_artifact.py' adding 'tests/EPPs/udf/copy/test_measurement_to_analyte.py' adding 'tests/EPPs/udf/copy/test_original_position.py' adding 'tests/EPPs/udf/set/__init__.py' adding 'tests/EPPs/udf/set/test_qc_to_sample.py' adding 'tests/EPPs/udf/set/test_set_barcode.py' adding 'tests/EPPs/udf/set/test_set_dates.py' adding 'tests/EPPs/udf/set/test_set_method.py' adding 'tests/EPPs/udf/set/test_set_samples_reads_missing.py' adding 'tests/get/__init__.py' adding 'tests/get/test_artifacts.py' adding 'tests/get/test_udfs.py' adding 'cg_lims-6.8.0.dist-info/METADATA' adding 'cg_lims-6.8.0.dist-info/WHEEL' adding 'cg_lims-6.8.0.dist-info/entry_points.txt' adding 'cg_lims-6.8.0.dist-info/top_level.txt' adding 'cg_lims-6.8.0.dist-info/RECORD' removing build/bdist.linux-x86_64/wheel Building wheel for cg-lims (pyproject.toml): finished with status 'done' Created wheel for cg-lims: filename=cg_lims-6.8.0-py3-none-any.whl size=179408 sha256=3ebec0664c8a146c2e1b073747a02566130db37bf10b58f9ed615b4f66431c90 Stored in directory: /builddir/.cache/pip/wheels/1f/53/9e/6c10e554003c3a2d1dd20138648cd4a97a4c05c8de594f355f Successfully built cg-lims + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.XM6oMW + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/python-cg-lims-6.8.0-1.fc39.x86_64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/python-cg-lims-6.8.0-1.fc39.x86_64 ++ dirname /builddir/build/BUILDROOT/python-cg-lims-6.8.0-1.fc39.x86_64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/python-cg-lims-6.8.0-1.fc39.x86_64 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd cg_lims-6.8.0 ++ xargs basename --multiple ++ ls /builddir/build/BUILD/cg_lims-6.8.0/pyproject-wheeldir/cg_lims-6.8.0-py3-none-any.whl ++ sed -E 's/([^-]+)-([^-]+)-.+\.whl/\1==\2/' + specifier=cg_lims==6.8.0 + TMPDIR=/builddir/build/BUILD/cg_lims-6.8.0/.pyproject-builddir + /usr/bin/python3 -m pip install --root /builddir/build/BUILDROOT/python-cg-lims-6.8.0-1.fc39.x86_64 --prefix /usr --no-deps --disable-pip-version-check --progress-bar off --verbose --ignore-installed --no-warn-script-location --no-index --no-cache-dir --find-links /builddir/build/BUILD/cg_lims-6.8.0/pyproject-wheeldir cg_lims==6.8.0 Using pip 23.0.1 from /usr/lib/python3.11/site-packages/pip (python 3.11) Looking in links: /builddir/build/BUILD/cg_lims-6.8.0/pyproject-wheeldir Processing ./pyproject-wheeldir/cg_lims-6.8.0-py3-none-any.whl Installing collected packages: cg_lims Creating /builddir/build/BUILDROOT/python-cg-lims-6.8.0-1.fc39.x86_64/usr/bin changing mode of /builddir/build/BUILDROOT/python-cg-lims-6.8.0-1.fc39.x86_64/usr/bin/lims to 755 Successfully installed cg_lims-6.8.0 + '[' -d /builddir/build/BUILDROOT/python-cg-lims-6.8.0-1.fc39.x86_64/usr/bin ']' + '[' -z sP ']' + shebang_flags=-kasP + /usr/bin/python3 -B /usr/lib/rpm/redhat/pathfix.py -pni /usr/bin/python3 -kasP /builddir/build/BUILDROOT/python-cg-lims-6.8.0-1.fc39.x86_64/usr/bin/lims /builddir/build/BUILDROOT/python-cg-lims-6.8.0-1.fc39.x86_64/usr/bin/lims: updating + rm -rfv /builddir/build/BUILDROOT/python-cg-lims-6.8.0-1.fc39.x86_64/usr/bin/__pycache__ + rm -f /builddir/build/BUILD/python-cg-lims-6.8.0-1.fc39.x86_64-pyproject-ghost-distinfo + site_dirs=() + '[' -d /builddir/build/BUILDROOT/python-cg-lims-6.8.0-1.fc39.x86_64/usr/lib/python3.11/site-packages ']' + site_dirs+=("/usr/lib/python3.11/site-packages") + '[' /builddir/build/BUILDROOT/python-cg-lims-6.8.0-1.fc39.x86_64/usr/lib64/python3.11/site-packages '!=' /builddir/build/BUILDROOT/python-cg-lims-6.8.0-1.fc39.x86_64/usr/lib/python3.11/site-packages ']' + '[' -d /builddir/build/BUILDROOT/python-cg-lims-6.8.0-1.fc39.x86_64/usr/lib64/python3.11/site-packages ']' + for site_dir in ${site_dirs[@]} + for distinfo in /builddir/build/BUILDROOT/python-cg-lims-6.8.0-1.fc39.x86_64$site_dir/*.dist-info + echo '%ghost /usr/lib/python3.11/site-packages/cg_lims-6.8.0.dist-info' + sed -i s/pip/rpm/ /builddir/build/BUILDROOT/python-cg-lims-6.8.0-1.fc39.x86_64/usr/lib/python3.11/site-packages/cg_lims-6.8.0.dist-info/INSTALLER + PYTHONPATH=/usr/lib/rpm/redhat + /usr/bin/python3 -B /usr/lib/rpm/redhat/pyproject_preprocess_record.py --buildroot /builddir/build/BUILDROOT/python-cg-lims-6.8.0-1.fc39.x86_64 --record /builddir/build/BUILDROOT/python-cg-lims-6.8.0-1.fc39.x86_64/usr/lib/python3.11/site-packages/cg_lims-6.8.0.dist-info/RECORD --output /builddir/build/BUILD/python-cg-lims-6.8.0-1.fc39.x86_64-pyproject-record + rm -fv /builddir/build/BUILDROOT/python-cg-lims-6.8.0-1.fc39.x86_64/usr/lib/python3.11/site-packages/cg_lims-6.8.0.dist-info/RECORD removed '/builddir/build/BUILDROOT/python-cg-lims-6.8.0-1.fc39.x86_64/usr/lib/python3.11/site-packages/cg_lims-6.8.0.dist-info/RECORD' + rm -fv /builddir/build/BUILDROOT/python-cg-lims-6.8.0-1.fc39.x86_64/usr/lib/python3.11/site-packages/cg_lims-6.8.0.dist-info/REQUESTED removed '/builddir/build/BUILDROOT/python-cg-lims-6.8.0-1.fc39.x86_64/usr/lib/python3.11/site-packages/cg_lims-6.8.0.dist-info/REQUESTED' ++ wc -l /builddir/build/BUILD/python-cg-lims-6.8.0-1.fc39.x86_64-pyproject-ghost-distinfo ++ cut -f1 '-d ' + lines=1 + '[' 1 -ne 1 ']' + /usr/bin/python3 /usr/lib/rpm/redhat/pyproject_save_files.py --output-files /builddir/build/BUILD/python-cg-lims-6.8.0-1.fc39.x86_64-pyproject-files --output-modules /builddir/build/BUILD/python-cg-lims-6.8.0-1.fc39.x86_64-pyproject-modules --buildroot /builddir/build/BUILDROOT/python-cg-lims-6.8.0-1.fc39.x86_64 --sitelib /usr/lib/python3.11/site-packages --sitearch /usr/lib64/python3.11/site-packages --python-version 3.11 --pyproject-record /builddir/build/BUILD/python-cg-lims-6.8.0-1.fc39.x86_64-pyproject-record --prefix /usr '*' +auto + /usr/bin/find-debuginfo -j2 --strict-build-id -m -i --build-id-seed 6.8.0-1.fc39 --unique-debug-suffix -6.8.0-1.fc39.x86_64 --unique-debug-src-base python-cg-lims-6.8.0-1.fc39.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/cg_lims-6.8.0 find: 'debug': No such file or directory + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j2 Bytecompiling .py files below /builddir/build/BUILDROOT/python-cg-lims-6.8.0-1.fc39.x86_64/usr/lib/python3.11 using python3.11 + /usr/lib/rpm/redhat/brp-python-hardlink Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.c9KiHj + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd cg_lims-6.8.0 + '[' '!' -f /builddir/build/BUILD/python-cg-lims-6.8.0-1.fc39.x86_64-pyproject-modules ']' + PATH=/builddir/build/BUILDROOT/python-cg-lims-6.8.0-1.fc39.x86_64/usr/bin:/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin + PYTHONPATH=/builddir/build/BUILDROOT/python-cg-lims-6.8.0-1.fc39.x86_64/usr/lib64/python3.11/site-packages:/builddir/build/BUILDROOT/python-cg-lims-6.8.0-1.fc39.x86_64/usr/lib/python3.11/site-packages + _PYTHONSITE=/builddir/build/BUILDROOT/python-cg-lims-6.8.0-1.fc39.x86_64/usr/lib64/python3.11/site-packages:/builddir/build/BUILDROOT/python-cg-lims-6.8.0-1.fc39.x86_64/usr/lib/python3.11/site-packages + PYTHONDONTWRITEBYTECODE=1 + /usr/bin/python3 -sP /usr/lib/rpm/redhat/import_all_modules.py -f /builddir/build/BUILD/python-cg-lims-6.8.0-1.fc39.x86_64-pyproject-modules -t Check import: cg_lims Check import: tests + RPM_EC=0 ++ jobs -p + exit 0 Processing files: python3-cg-lims-6.8.0-1.fc39.noarch Provides: python-cg-lims = 6.8.0-1.fc39 python3-cg-lims = 6.8.0-1.fc39 python3.11-cg-lims = 6.8.0-1.fc39 python3.11dist(cg-lims) = 6.8 python3dist(cg-lims) = 6.8 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: /usr/bin/python3 python(abi) = 3.11 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/python-cg-lims-6.8.0-1.fc39.x86_64 Wrote: /builddir/build/SRPMS/python-cg-lims-6.8.0-1.fc39.src.rpm Wrote: /builddir/build/RPMS/python3-cg-lims-6.8.0-1.fc39.noarch.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.12QwZE + umask 022 + cd /builddir/build/BUILD + cd cg_lims-6.8.0 + /usr/bin/rm -rf /builddir/build/BUILDROOT/python-cg-lims-6.8.0-1.fc39.x86_64 + RPM_EC=0 ++ jobs -p + exit 0 Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.pEvbvW + umask 022 + cd /builddir/build/BUILD + rm -rf cg_lims-6.8.0 cg_lims-6.8.0.gemspec + RPM_EC=0 ++ jobs -p + exit 0 Child return code was: 0