Mock Version: 3.5 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/python-simulariumio.spec'], chrootPath='/var/lib/mock/fedora-rawhide-x86_64-1683324702.012185/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1000gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.vpitfkrt:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueprintOutput=True) Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.vpitfkrt:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '42aa271eaff243ab98655c08bd539b33', '-D', '/var/lib/mock/fedora-rawhide-x86_64-1683324702.012185/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.vpitfkrt:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/python-simulariumio.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1683244800 Wrote: /builddir/build/SRPMS/python-simulariumio-1.8.0-1.fc39.src.rpm Child return code was: 0 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -br --target x86_64 --nodeps /builddir/build/SPECS/python-simulariumio.spec'], chrootPath='/var/lib/mock/fedora-rawhide-x86_64-1683324702.012185/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1000gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.vpitfkrt:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueraiseExc=FalseprintOutput=True) Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.vpitfkrt:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '982aa45eb3454959b552eccbd3ab6ab9', '-D', '/var/lib/mock/fedora-rawhide-x86_64-1683324702.012185/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.vpitfkrt:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -br --target x86_64 --nodeps /builddir/build/SPECS/python-simulariumio.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1683244800 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.POetxr + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf simulariumio-1.8.0 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/simulariumio-1.8.0.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd simulariumio-1.8.0 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + RPM_EC=0 ++ jobs -p + exit 0 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.zGK7Ix + umask 022 + cd /builddir/build/BUILD + cd simulariumio-1.8.0 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(pip) >= 19' + echo 'python3dist(packaging)' + '[' -f pyproject.toml ']' + echo '(python3dist(toml) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/simulariumio-1.8.0/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + TMPDIR=/builddir/build/BUILD/simulariumio-1.8.0/.pyproject-builddir + RPM_TOXENV=py311 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/simulariumio-1.8.0/pyproject-wheeldir --output /builddir/build/BUILD/python-simulariumio-1.8.0-1.fc39.x86_64-pyproject-buildrequires Handling setuptools>=45 from build-system.requires Requirement not satisfied: setuptools>=45 Handling wheel from build-system.requires Requirement not satisfied: wheel Handling setuptools_scm[toml]>=6.2 from build-system.requires Requirement not satisfied: setuptools_scm[toml]>=6.2 Exiting dependency generation pass: build backend + cat /builddir/build/BUILD/python-simulariumio-1.8.0-1.fc39.x86_64-pyproject-buildrequires + rm -rfv '*.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/python-simulariumio-1.8.0-1.fc39.buildreqs.nosrc.rpm Child return code was: 11 Dynamic buildrequires detected Going to install missing buildrequires. See root.log for details. ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -br --target x86_64 --nodeps /builddir/build/SPECS/python-simulariumio.spec'], chrootPath='/var/lib/mock/fedora-rawhide-x86_64-1683324702.012185/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1000gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.vpitfkrt:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueraiseExc=FalseprintOutput=True) Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.vpitfkrt:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '777ed29066c14305aed065c640a97290', '-D', '/var/lib/mock/fedora-rawhide-x86_64-1683324702.012185/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.vpitfkrt:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -br --target x86_64 --nodeps /builddir/build/SPECS/python-simulariumio.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1683244800 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.fYxTGJ + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf simulariumio-1.8.0 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/simulariumio-1.8.0.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd simulariumio-1.8.0 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + RPM_EC=0 ++ jobs -p + exit 0 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.JJuelS + umask 022 + cd /builddir/build/BUILD + cd simulariumio-1.8.0 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(pip) >= 19' + echo 'python3dist(packaging)' + '[' -f pyproject.toml ']' + echo '(python3dist(toml) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/simulariumio-1.8.0/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + TMPDIR=/builddir/build/BUILD/simulariumio-1.8.0/.pyproject-builddir + RPM_TOXENV=py311 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/simulariumio-1.8.0/pyproject-wheeldir --output /builddir/build/BUILD/python-simulariumio-1.8.0-1.fc39.x86_64-pyproject-buildrequires Handling setuptools>=45 from build-system.requires Requirement satisfied: setuptools>=45 (installed: setuptools 67.7.2) Handling wheel from build-system.requires Requirement satisfied: wheel (installed: wheel 0.40.0) Handling setuptools_scm[toml]>=6.2 from build-system.requires Requirement satisfied: setuptools_scm[toml]>=6.2 (installed: setuptools_scm 7.1.0) (extras are currently not checked) /usr/lib/python3.11/site-packages/setuptools/config/pyprojecttoml.py:66: _BetaConfiguration: Support for `[tool.setuptools]` in `pyproject.toml` is still *beta*. config = read_configuration(filepath, True, ignore_option_errors, dist) running egg_info writing simulariumio.egg-info/PKG-INFO writing dependency_links to simulariumio.egg-info/dependency_links.txt writing requirements to simulariumio.egg-info/requires.txt writing top-level names to simulariumio.egg-info/top_level.txt reading manifest file 'simulariumio.egg-info/SOURCES.txt' adding license file 'LICENSE' writing manifest file 'simulariumio.egg-info/SOURCES.txt' Handling wheel from get_requires_for_build_wheel Requirement satisfied: wheel (installed: wheel 0.40.0) /usr/lib/python3.11/site-packages/setuptools/config/pyprojecttoml.py:66: _BetaConfiguration: Support for `[tool.setuptools]` in `pyproject.toml` is still *beta*. config = read_configuration(filepath, True, ignore_option_errors, dist) running dist_info writing simulariumio.egg-info/PKG-INFO writing dependency_links to simulariumio.egg-info/dependency_links.txt writing requirements to simulariumio.egg-info/requires.txt writing top-level names to simulariumio.egg-info/top_level.txt reading manifest file 'simulariumio.egg-info/SOURCES.txt' adding license file 'LICENSE' writing manifest file 'simulariumio.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/simulariumio-1.8.0/simulariumio-1.8.0.dist-info' Handling numpy (>=1.19.0) from hook generated metadata: Requires-Dist Requirement not satisfied: numpy (>=1.19.0) Handling pandas (>=1.1.2) from hook generated metadata: Requires-Dist Requirement not satisfied: pandas (>=1.1.2) Handling pint (>=0.17) from hook generated metadata: Requires-Dist Requirement not satisfied: pint (>=0.17) Handling awscli (>=1.20) ; extra == 'benchmark' from hook generated metadata: Requires-Dist Ignoring alien requirement: awscli (>=1.20) ; extra == 'benchmark' Handling quilt3 ; extra == 'benchmark' from hook generated metadata: Requires-Dist Ignoring alien requirement: quilt3 ; extra == 'benchmark' Handling cellpack (>=1.0.3) ; extra == 'cellpack' from hook generated metadata: Requires-Dist Ignoring alien requirement: cellpack (>=1.0.3) ; extra == 'cellpack' Handling ipython ; extra == 'dev' from hook generated metadata: Requires-Dist Ignoring alien requirement: ipython ; extra == 'dev' Handling m2r2 (>=0.2.7) ; extra == 'docs' from hook generated metadata: Requires-Dist Ignoring alien requirement: m2r2 (>=0.2.7) ; extra == 'docs' Handling Sphinx (>=4.0.0) ; extra == 'docs' from hook generated metadata: Requires-Dist Ignoring alien requirement: Sphinx (>=4.0.0) ; extra == 'docs' Handling furo (>=2022.4.7) ; extra == 'docs' from hook generated metadata: Requires-Dist Ignoring alien requirement: furo (>=2022.4.7) ; extra == 'docs' Handling numpydoc ; extra == 'docs' from hook generated metadata: Requires-Dist Ignoring alien requirement: numpydoc ; extra == 'docs' Handling sphinx-copybutton ; extra == 'docs' from hook generated metadata: Requires-Dist Ignoring alien requirement: sphinx-copybutton ; extra == 'docs' Handling docutils (<0.19,>=0.18) ; extra == 'docs' from hook generated metadata: Requires-Dist Ignoring alien requirement: docutils (<0.19,>=0.18) ; extra == 'docs' Handling black (>=22.3.0) ; extra == 'lint' from hook generated metadata: Requires-Dist Ignoring alien requirement: black (>=22.3.0) ; extra == 'lint' Handling check-manifest (>=0.48) ; extra == 'lint' from hook generated metadata: Requires-Dist Ignoring alien requirement: check-manifest (>=0.48) ; extra == 'lint' Handling flake8 (>=3.8.3) ; extra == 'lint' from hook generated metadata: Requires-Dist Ignoring alien requirement: flake8 (>=3.8.3) ; extra == 'lint' Handling flake8-debugger (>=3.2.1) ; extra == 'lint' from hook generated metadata: Requires-Dist Ignoring alien requirement: flake8-debugger (>=3.2.1) ; extra == 'lint' Handling flake8-typing-imports (>=1.9.0) ; extra == 'lint' from hook generated metadata: Requires-Dist Ignoring alien requirement: flake8-typing-imports (>=1.9.0) ; extra == 'lint' Handling isort (>=5.7.0) ; extra == 'lint' from hook generated metadata: Requires-Dist Ignoring alien requirement: isort (>=5.7.0) ; extra == 'lint' Handling mypy (>=0.790) ; extra == 'lint' from hook generated metadata: Requires-Dist Ignoring alien requirement: mypy (>=0.790) ; extra == 'lint' Handling pre-commit (>=2.20.0) ; extra == 'lint' from hook generated metadata: Requires-Dist Ignoring alien requirement: pre-commit (>=2.20.0) ; extra == 'lint' Handling scipy (>=1.5.2) ; extra == 'mcell' from hook generated metadata: Requires-Dist Ignoring alien requirement: scipy (>=1.5.2) ; extra == 'mcell' Handling MDAnalysis (>=2.0.0) ; extra == 'md' from hook generated metadata: Requires-Dist Ignoring alien requirement: MDAnalysis (>=2.0.0) ; extra == 'md' Handling MDAnalysisTests (>=2.0.0) ; extra == 'md' from hook generated metadata: Requires-Dist Ignoring alien requirement: MDAnalysisTests (>=2.0.0) ; extra == 'md' Handling scipy (>=1.5.2) ; extra == 'physicell' from hook generated metadata: Requires-Dist Ignoring alien requirement: scipy (>=1.5.2) ; extra == 'physicell' Handling coverage (>=5.1) ; extra == 'test' from hook generated metadata: Requires-Dist Ignoring alien requirement: coverage (>=5.1) ; extra == 'test' Handling pytest (>=5.4.3) ; extra == 'test' from hook generated metadata: Requires-Dist Ignoring alien requirement: pytest (>=5.4.3) ; extra == 'test' Handling pytest-cov (>=2.9.0) ; extra == 'test' from hook generated metadata: Requires-Dist Ignoring alien requirement: pytest-cov (>=2.9.0) ; extra == 'test' Handling pytest-raises (>=0.11) ; extra == 'test' from hook generated metadata: Requires-Dist Ignoring alien requirement: pytest-raises (>=0.11) ; extra == 'test' Handling jupyter ; extra == 'tutorial' from hook generated metadata: Requires-Dist Ignoring alien requirement: jupyter ; extra == 'tutorial' Handling scipy (>=1.5.2) ; extra == 'tutorial' from hook generated metadata: Requires-Dist Ignoring alien requirement: scipy (>=1.5.2) ; extra == 'tutorial' Handling MDAnalysis (>=2.0.0) ; extra == 'tutorial' from hook generated metadata: Requires-Dist Ignoring alien requirement: MDAnalysis (>=2.0.0) ; extra == 'tutorial' Handling MDAnalysisTests (>=2.0.0) ; extra == 'tutorial' from hook generated metadata: Requires-Dist Ignoring alien requirement: MDAnalysisTests (>=2.0.0) ; extra == 'tutorial' + cat /builddir/build/BUILD/python-simulariumio-1.8.0-1.fc39.x86_64-pyproject-buildrequires + rm -rfv simulariumio-1.8.0.dist-info/ removed 'simulariumio-1.8.0.dist-info/LICENSE' removed 'simulariumio-1.8.0.dist-info/METADATA' removed 'simulariumio-1.8.0.dist-info/top_level.txt' removed directory 'simulariumio-1.8.0.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/python-simulariumio-1.8.0-1.fc39.buildreqs.nosrc.rpm Child return code was: 11 Dynamic buildrequires detected Going to install missing buildrequires. See root.log for details. ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -br --target x86_64 --nodeps /builddir/build/SPECS/python-simulariumio.spec'], chrootPath='/var/lib/mock/fedora-rawhide-x86_64-1683324702.012185/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1000gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.vpitfkrt:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueraiseExc=FalseprintOutput=True) Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.vpitfkrt:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', 'c1ef111751ff4ad4be61cb11285dca1c', '-D', '/var/lib/mock/fedora-rawhide-x86_64-1683324702.012185/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.vpitfkrt:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -br --target x86_64 --nodeps /builddir/build/SPECS/python-simulariumio.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1683244800 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.PX6lT5 + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf simulariumio-1.8.0 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/simulariumio-1.8.0.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd simulariumio-1.8.0 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + RPM_EC=0 ++ jobs -p + exit 0 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.ZxlRUA + umask 022 + cd /builddir/build/BUILD + cd simulariumio-1.8.0 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(pip) >= 19' + echo 'python3dist(packaging)' + '[' -f pyproject.toml ']' + echo '(python3dist(toml) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/simulariumio-1.8.0/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + TMPDIR=/builddir/build/BUILD/simulariumio-1.8.0/.pyproject-builddir + RPM_TOXENV=py311 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/simulariumio-1.8.0/pyproject-wheeldir --output /builddir/build/BUILD/python-simulariumio-1.8.0-1.fc39.x86_64-pyproject-buildrequires Handling setuptools>=45 from build-system.requires Requirement satisfied: setuptools>=45 (installed: setuptools 67.7.2) Handling wheel from build-system.requires Requirement satisfied: wheel (installed: wheel 0.40.0) Handling setuptools_scm[toml]>=6.2 from build-system.requires Requirement satisfied: setuptools_scm[toml]>=6.2 (installed: setuptools_scm 7.1.0) (extras are currently not checked) /usr/lib/python3.11/site-packages/setuptools/config/pyprojecttoml.py:66: _BetaConfiguration: Support for `[tool.setuptools]` in `pyproject.toml` is still *beta*. config = read_configuration(filepath, True, ignore_option_errors, dist) running egg_info writing simulariumio.egg-info/PKG-INFO writing dependency_links to simulariumio.egg-info/dependency_links.txt writing requirements to simulariumio.egg-info/requires.txt writing top-level names to simulariumio.egg-info/top_level.txt reading manifest file 'simulariumio.egg-info/SOURCES.txt' adding license file 'LICENSE' writing manifest file 'simulariumio.egg-info/SOURCES.txt' Handling wheel from get_requires_for_build_wheel Requirement satisfied: wheel (installed: wheel 0.40.0) /usr/lib/python3.11/site-packages/setuptools/config/pyprojecttoml.py:66: _BetaConfiguration: Support for `[tool.setuptools]` in `pyproject.toml` is still *beta*. config = read_configuration(filepath, True, ignore_option_errors, dist) running dist_info writing simulariumio.egg-info/PKG-INFO writing dependency_links to simulariumio.egg-info/dependency_links.txt writing requirements to simulariumio.egg-info/requires.txt writing top-level names to simulariumio.egg-info/top_level.txt reading manifest file 'simulariumio.egg-info/SOURCES.txt' adding license file 'LICENSE' writing manifest file 'simulariumio.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/simulariumio-1.8.0/simulariumio-1.8.0.dist-info' Handling numpy (>=1.19.0) from hook generated metadata: Requires-Dist Requirement satisfied: numpy (>=1.19.0) (installed: numpy 1.24.3) Handling pandas (>=1.1.2) from hook generated metadata: Requires-Dist Requirement satisfied: pandas (>=1.1.2) (installed: pandas 1.5.3) Handling pint (>=0.17) from hook generated metadata: Requires-Dist Requirement satisfied: pint (>=0.17) (installed: pint 0.21) Handling awscli (>=1.20) ; extra == 'benchmark' from hook generated metadata: Requires-Dist Ignoring alien requirement: awscli (>=1.20) ; extra == 'benchmark' Handling quilt3 ; extra == 'benchmark' from hook generated metadata: Requires-Dist Ignoring alien requirement: quilt3 ; extra == 'benchmark' Handling cellpack (>=1.0.3) ; extra == 'cellpack' from hook generated metadata: Requires-Dist Ignoring alien requirement: cellpack (>=1.0.3) ; extra == 'cellpack' Handling ipython ; extra == 'dev' from hook generated metadata: Requires-Dist Ignoring alien requirement: ipython ; extra == 'dev' Handling m2r2 (>=0.2.7) ; extra == 'docs' from hook generated metadata: Requires-Dist Ignoring alien requirement: m2r2 (>=0.2.7) ; extra == 'docs' Handling Sphinx (>=4.0.0) ; extra == 'docs' from hook generated metadata: Requires-Dist Ignoring alien requirement: Sphinx (>=4.0.0) ; extra == 'docs' Handling furo (>=2022.4.7) ; extra == 'docs' from hook generated metadata: Requires-Dist Ignoring alien requirement: furo (>=2022.4.7) ; extra == 'docs' Handling numpydoc ; extra == 'docs' from hook generated metadata: Requires-Dist Ignoring alien requirement: numpydoc ; extra == 'docs' Handling sphinx-copybutton ; extra == 'docs' from hook generated metadata: Requires-Dist Ignoring alien requirement: sphinx-copybutton ; extra == 'docs' Handling docutils (<0.19,>=0.18) ; extra == 'docs' from hook generated metadata: Requires-Dist Ignoring alien requirement: docutils (<0.19,>=0.18) ; extra == 'docs' Handling black (>=22.3.0) ; extra == 'lint' from hook generated metadata: Requires-Dist Ignoring alien requirement: black (>=22.3.0) ; extra == 'lint' Handling check-manifest (>=0.48) ; extra == 'lint' from hook generated metadata: Requires-Dist Ignoring alien requirement: check-manifest (>=0.48) ; extra == 'lint' Handling flake8 (>=3.8.3) ; extra == 'lint' from hook generated metadata: Requires-Dist Ignoring alien requirement: flake8 (>=3.8.3) ; extra == 'lint' Handling flake8-debugger (>=3.2.1) ; extra == 'lint' from hook generated metadata: Requires-Dist Ignoring alien requirement: flake8-debugger (>=3.2.1) ; extra == 'lint' Handling flake8-typing-imports (>=1.9.0) ; extra == 'lint' from hook generated metadata: Requires-Dist Ignoring alien requirement: flake8-typing-imports (>=1.9.0) ; extra == 'lint' Handling isort (>=5.7.0) ; extra == 'lint' from hook generated metadata: Requires-Dist Ignoring alien requirement: isort (>=5.7.0) ; extra == 'lint' Handling mypy (>=0.790) ; extra == 'lint' from hook generated metadata: Requires-Dist Ignoring alien requirement: mypy (>=0.790) ; extra == 'lint' Handling pre-commit (>=2.20.0) ; extra == 'lint' from hook generated metadata: Requires-Dist Ignoring alien requirement: pre-commit (>=2.20.0) ; extra == 'lint' Handling scipy (>=1.5.2) ; extra == 'mcell' from hook generated metadata: Requires-Dist Ignoring alien requirement: scipy (>=1.5.2) ; extra == 'mcell' Handling MDAnalysis (>=2.0.0) ; extra == 'md' from hook generated metadata: Requires-Dist Ignoring alien requirement: MDAnalysis (>=2.0.0) ; extra == 'md' Handling MDAnalysisTests (>=2.0.0) ; extra == 'md' from hook generated metadata: Requires-Dist Ignoring alien requirement: MDAnalysisTests (>=2.0.0) ; extra == 'md' Handling scipy (>=1.5.2) ; extra == 'physicell' from hook generated metadata: Requires-Dist Ignoring alien requirement: scipy (>=1.5.2) ; extra == 'physicell' Handling coverage (>=5.1) ; extra == 'test' from hook generated metadata: Requires-Dist Ignoring alien requirement: coverage (>=5.1) ; extra == 'test' Handling pytest (>=5.4.3) ; extra == 'test' from hook generated metadata: Requires-Dist Ignoring alien requirement: pytest (>=5.4.3) ; extra == 'test' Handling pytest-cov (>=2.9.0) ; extra == 'test' from hook generated metadata: Requires-Dist Ignoring alien requirement: pytest-cov (>=2.9.0) ; extra == 'test' Handling pytest-raises (>=0.11) ; extra == 'test' from hook generated metadata: Requires-Dist Ignoring alien requirement: pytest-raises (>=0.11) ; extra == 'test' Handling jupyter ; extra == 'tutorial' from hook generated metadata: Requires-Dist Ignoring alien requirement: jupyter ; extra == 'tutorial' Handling scipy (>=1.5.2) ; extra == 'tutorial' from hook generated metadata: Requires-Dist Ignoring alien requirement: scipy (>=1.5.2) ; extra == 'tutorial' Handling MDAnalysis (>=2.0.0) ; extra == 'tutorial' from hook generated metadata: Requires-Dist Ignoring alien requirement: MDAnalysis (>=2.0.0) ; extra == 'tutorial' Handling MDAnalysisTests (>=2.0.0) ; extra == 'tutorial' from hook generated metadata: Requires-Dist Ignoring alien requirement: MDAnalysisTests (>=2.0.0) ; extra == 'tutorial' + cat /builddir/build/BUILD/python-simulariumio-1.8.0-1.fc39.x86_64-pyproject-buildrequires + rm -rfv simulariumio-1.8.0.dist-info/ removed 'simulariumio-1.8.0.dist-info/LICENSE' removed 'simulariumio-1.8.0.dist-info/METADATA' removed 'simulariumio-1.8.0.dist-info/top_level.txt' removed directory 'simulariumio-1.8.0.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/python-simulariumio-1.8.0-1.fc39.buildreqs.nosrc.rpm Child return code was: 11 Dynamic buildrequires detected Going to install missing buildrequires. See root.log for details. ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -ba --noprep --target x86_64 --nodeps /builddir/build/SPECS/python-simulariumio.spec'], chrootPath='/var/lib/mock/fedora-rawhide-x86_64-1683324702.012185/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1000gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.vpitfkrt:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueprintOutput=True) Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.vpitfkrt:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '983d269c8f88435eb26aaf2838137602', '-D', '/var/lib/mock/fedora-rawhide-x86_64-1683324702.012185/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.vpitfkrt:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -ba --noprep --target x86_64 --nodeps /builddir/build/SPECS/python-simulariumio.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1683244800 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.IEh25O + umask 022 + cd /builddir/build/BUILD + cd simulariumio-1.8.0 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(pip) >= 19' + echo 'python3dist(packaging)' + '[' -f pyproject.toml ']' + echo '(python3dist(toml) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/simulariumio-1.8.0/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + TMPDIR=/builddir/build/BUILD/simulariumio-1.8.0/.pyproject-builddir + RPM_TOXENV=py311 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/simulariumio-1.8.0/pyproject-wheeldir --output /builddir/build/BUILD/python-simulariumio-1.8.0-1.fc39.x86_64-pyproject-buildrequires Handling setuptools>=45 from build-system.requires Requirement satisfied: setuptools>=45 (installed: setuptools 67.7.2) Handling wheel from build-system.requires Requirement satisfied: wheel (installed: wheel 0.40.0) Handling setuptools_scm[toml]>=6.2 from build-system.requires Requirement satisfied: setuptools_scm[toml]>=6.2 (installed: setuptools_scm 7.1.0) (extras are currently not checked) /usr/lib/python3.11/site-packages/setuptools/config/pyprojecttoml.py:66: _BetaConfiguration: Support for `[tool.setuptools]` in `pyproject.toml` is still *beta*. config = read_configuration(filepath, True, ignore_option_errors, dist) running egg_info writing simulariumio.egg-info/PKG-INFO writing dependency_links to simulariumio.egg-info/dependency_links.txt writing requirements to simulariumio.egg-info/requires.txt writing top-level names to simulariumio.egg-info/top_level.txt reading manifest file 'simulariumio.egg-info/SOURCES.txt' adding license file 'LICENSE' writing manifest file 'simulariumio.egg-info/SOURCES.txt' Handling wheel from get_requires_for_build_wheel Requirement satisfied: wheel (installed: wheel 0.40.0) /usr/lib/python3.11/site-packages/setuptools/config/pyprojecttoml.py:66: _BetaConfiguration: Support for `[tool.setuptools]` in `pyproject.toml` is still *beta*. config = read_configuration(filepath, True, ignore_option_errors, dist) running dist_info writing simulariumio.egg-info/PKG-INFO writing dependency_links to simulariumio.egg-info/dependency_links.txt writing requirements to simulariumio.egg-info/requires.txt writing top-level names to simulariumio.egg-info/top_level.txt reading manifest file 'simulariumio.egg-info/SOURCES.txt' adding license file 'LICENSE' writing manifest file 'simulariumio.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/simulariumio-1.8.0/simulariumio-1.8.0.dist-info' Handling numpy (>=1.19.0) from hook generated metadata: Requires-Dist Requirement satisfied: numpy (>=1.19.0) (installed: numpy 1.24.3) Handling pandas (>=1.1.2) from hook generated metadata: Requires-Dist Requirement satisfied: pandas (>=1.1.2) (installed: pandas 1.5.3) Handling pint (>=0.17) from hook generated metadata: Requires-Dist Requirement satisfied: pint (>=0.17) (installed: pint 0.21) Handling awscli (>=1.20) ; extra == 'benchmark' from hook generated metadata: Requires-Dist Ignoring alien requirement: awscli (>=1.20) ; extra == 'benchmark' Handling quilt3 ; extra == 'benchmark' from hook generated metadata: Requires-Dist Ignoring alien requirement: quilt3 ; extra == 'benchmark' Handling cellpack (>=1.0.3) ; extra == 'cellpack' from hook generated metadata: Requires-Dist Ignoring alien requirement: cellpack (>=1.0.3) ; extra == 'cellpack' Handling ipython ; extra == 'dev' from hook generated metadata: Requires-Dist Ignoring alien requirement: ipython ; extra == 'dev' Handling m2r2 (>=0.2.7) ; extra == 'docs' from hook generated metadata: Requires-Dist Ignoring alien requirement: m2r2 (>=0.2.7) ; extra == 'docs' Handling Sphinx (>=4.0.0) ; extra == 'docs' from hook generated metadata: Requires-Dist Ignoring alien requirement: Sphinx (>=4.0.0) ; extra == 'docs' Handling furo (>=2022.4.7) ; extra == 'docs' from hook generated metadata: Requires-Dist Ignoring alien requirement: furo (>=2022.4.7) ; extra == 'docs' Handling numpydoc ; extra == 'docs' from hook generated metadata: Requires-Dist Ignoring alien requirement: numpydoc ; extra == 'docs' Handling sphinx-copybutton ; extra == 'docs' from hook generated metadata: Requires-Dist Ignoring alien requirement: sphinx-copybutton ; extra == 'docs' Handling docutils (<0.19,>=0.18) ; extra == 'docs' from hook generated metadata: Requires-Dist Ignoring alien requirement: docutils (<0.19,>=0.18) ; extra == 'docs' Handling black (>=22.3.0) ; extra == 'lint' from hook generated metadata: Requires-Dist Ignoring alien requirement: black (>=22.3.0) ; extra == 'lint' Handling check-manifest (>=0.48) ; extra == 'lint' from hook generated metadata: Requires-Dist Ignoring alien requirement: check-manifest (>=0.48) ; extra == 'lint' Handling flake8 (>=3.8.3) ; extra == 'lint' from hook generated metadata: Requires-Dist Ignoring alien requirement: flake8 (>=3.8.3) ; extra == 'lint' Handling flake8-debugger (>=3.2.1) ; extra == 'lint' from hook generated metadata: Requires-Dist Ignoring alien requirement: flake8-debugger (>=3.2.1) ; extra == 'lint' Handling flake8-typing-imports (>=1.9.0) ; extra == 'lint' from hook generated metadata: Requires-Dist Ignoring alien requirement: flake8-typing-imports (>=1.9.0) ; extra == 'lint' Handling isort (>=5.7.0) ; extra == 'lint' from hook generated metadata: Requires-Dist Ignoring alien requirement: isort (>=5.7.0) ; extra == 'lint' Handling mypy (>=0.790) ; extra == 'lint' from hook generated metadata: Requires-Dist Ignoring alien requirement: mypy (>=0.790) ; extra == 'lint' Handling pre-commit (>=2.20.0) ; extra == 'lint' from hook generated metadata: Requires-Dist Ignoring alien requirement: pre-commit (>=2.20.0) ; extra == 'lint' Handling scipy (>=1.5.2) ; extra == 'mcell' from hook generated metadata: Requires-Dist Ignoring alien requirement: scipy (>=1.5.2) ; extra == 'mcell' Handling MDAnalysis (>=2.0.0) ; extra == 'md' from hook generated metadata: Requires-Dist Ignoring alien requirement: MDAnalysis (>=2.0.0) ; extra == 'md' Handling MDAnalysisTests (>=2.0.0) ; extra == 'md' from hook generated metadata: Requires-Dist Ignoring alien requirement: MDAnalysisTests (>=2.0.0) ; extra == 'md' Handling scipy (>=1.5.2) ; extra == 'physicell' from hook generated metadata: Requires-Dist Ignoring alien requirement: scipy (>=1.5.2) ; extra == 'physicell' Handling coverage (>=5.1) ; extra == 'test' from hook generated metadata: Requires-Dist Ignoring alien requirement: coverage (>=5.1) ; extra == 'test' Handling pytest (>=5.4.3) ; extra == 'test' from hook generated metadata: Requires-Dist Ignoring alien requirement: pytest (>=5.4.3) ; extra == 'test' Handling pytest-cov (>=2.9.0) ; extra == 'test' from hook generated metadata: Requires-Dist Ignoring alien requirement: pytest-cov (>=2.9.0) ; extra == 'test' Handling pytest-raises (>=0.11) ; extra == 'test' from hook generated metadata: Requires-Dist Ignoring alien requirement: pytest-raises (>=0.11) ; extra == 'test' Handling jupyter ; extra == 'tutorial' from hook generated metadata: Requires-Dist Ignoring alien requirement: jupyter ; extra == 'tutorial' Handling scipy (>=1.5.2) ; extra == 'tutorial' from hook generated metadata: Requires-Dist Ignoring alien requirement: scipy (>=1.5.2) ; extra == 'tutorial' Handling MDAnalysis (>=2.0.0) ; extra == 'tutorial' from hook generated metadata: Requires-Dist Ignoring alien requirement: MDAnalysis (>=2.0.0) ; extra == 'tutorial' Handling MDAnalysisTests (>=2.0.0) ; extra == 'tutorial' from hook generated metadata: Requires-Dist Ignoring alien requirement: MDAnalysisTests (>=2.0.0) ; extra == 'tutorial' + cat /builddir/build/BUILD/python-simulariumio-1.8.0-1.fc39.x86_64-pyproject-buildrequires + rm -rfv simulariumio-1.8.0.dist-info/ removed 'simulariumio-1.8.0.dist-info/LICENSE' removed 'simulariumio-1.8.0.dist-info/METADATA' removed 'simulariumio-1.8.0.dist-info/top_level.txt' removed directory 'simulariumio-1.8.0.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.dGF5N7 + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd simulariumio-1.8.0 + mkdir -p /builddir/build/BUILD/simulariumio-1.8.0/.pyproject-builddir + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + TMPDIR=/builddir/build/BUILD/simulariumio-1.8.0/.pyproject-builddir + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_wheel.py /builddir/build/BUILD/simulariumio-1.8.0/pyproject-wheeldir Processing /builddir/build/BUILD/simulariumio-1.8.0 Preparing metadata (pyproject.toml): started Running command Preparing metadata (pyproject.toml) /usr/lib/python3.11/site-packages/setuptools/config/pyprojecttoml.py:66: _BetaConfiguration: Support for `[tool.setuptools]` in `pyproject.toml` is still *beta*. config = read_configuration(filepath, True, ignore_option_errors, dist) running dist_info creating /builddir/build/BUILD/simulariumio-1.8.0/.pyproject-builddir/pip-modern-metadata-_6rf9xum/simulariumio.egg-info writing /builddir/build/BUILD/simulariumio-1.8.0/.pyproject-builddir/pip-modern-metadata-_6rf9xum/simulariumio.egg-info/PKG-INFO writing dependency_links to /builddir/build/BUILD/simulariumio-1.8.0/.pyproject-builddir/pip-modern-metadata-_6rf9xum/simulariumio.egg-info/dependency_links.txt writing requirements to /builddir/build/BUILD/simulariumio-1.8.0/.pyproject-builddir/pip-modern-metadata-_6rf9xum/simulariumio.egg-info/requires.txt writing top-level names to /builddir/build/BUILD/simulariumio-1.8.0/.pyproject-builddir/pip-modern-metadata-_6rf9xum/simulariumio.egg-info/top_level.txt writing manifest file '/builddir/build/BUILD/simulariumio-1.8.0/.pyproject-builddir/pip-modern-metadata-_6rf9xum/simulariumio.egg-info/SOURCES.txt' reading manifest file '/builddir/build/BUILD/simulariumio-1.8.0/.pyproject-builddir/pip-modern-metadata-_6rf9xum/simulariumio.egg-info/SOURCES.txt' adding license file 'LICENSE' writing manifest file '/builddir/build/BUILD/simulariumio-1.8.0/.pyproject-builddir/pip-modern-metadata-_6rf9xum/simulariumio.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/simulariumio-1.8.0/.pyproject-builddir/pip-modern-metadata-_6rf9xum/simulariumio-1.8.0.dist-info' Preparing metadata (pyproject.toml): finished with status 'done' Building wheels for collected packages: simulariumio Building wheel for simulariumio (pyproject.toml): started Running command Building wheel for simulariumio (pyproject.toml) /usr/lib/python3.11/site-packages/setuptools/config/pyprojecttoml.py:66: _BetaConfiguration: Support for `[tool.setuptools]` in `pyproject.toml` is still *beta*. config = read_configuration(filepath, True, ignore_option_errors, dist) running bdist_wheel running build running build_py creating build creating build/lib creating build/lib/simulariumio copying simulariumio/utils.py -> build/lib/simulariumio copying simulariumio/trajectory_converter.py -> build/lib/simulariumio copying simulariumio/file_converter.py -> build/lib/simulariumio copying simulariumio/exceptions.py -> build/lib/simulariumio copying simulariumio/constants.py -> build/lib/simulariumio copying simulariumio/__init__.py -> build/lib/simulariumio creating build/lib/examples copying examples/__init__.py -> build/lib/examples creating build/lib/docs copying docs/conf.py -> build/lib/docs creating build/lib/benchmarks copying benchmarks/upload_benchmark_resources.py -> build/lib/benchmarks copying benchmarks/download_benchmark_resources.py -> build/lib/benchmarks copying benchmarks/benchmark_simulariumio.py -> build/lib/benchmarks creating build/lib/simulariumio/writers copying simulariumio/writers/writer.py -> build/lib/simulariumio/writers copying simulariumio/writers/json_writer.py -> build/lib/simulariumio/writers copying simulariumio/writers/binary_writer.py -> build/lib/simulariumio/writers copying simulariumio/writers/binary_values.py -> build/lib/simulariumio/writers copying simulariumio/writers/binary_chunk.py -> build/lib/simulariumio/writers copying simulariumio/writers/__init__.py -> build/lib/simulariumio/writers creating build/lib/simulariumio/tests copying simulariumio/tests/test_input_file_data.py -> build/lib/simulariumio/tests copying simulariumio/tests/test_from_dict.py -> build/lib/simulariumio/tests copying simulariumio/tests/test_agents_from_lists.py -> build/lib/simulariumio/tests copying simulariumio/tests/conftest.py -> build/lib/simulariumio/tests copying simulariumio/tests/__init__.py -> build/lib/simulariumio/tests creating build/lib/simulariumio/springsalad copying simulariumio/springsalad/springsalad_data.py -> build/lib/simulariumio/springsalad copying simulariumio/springsalad/springsalad_converter.py -> build/lib/simulariumio/springsalad copying simulariumio/springsalad/__init__.py -> build/lib/simulariumio/springsalad creating build/lib/simulariumio/smoldyn copying simulariumio/smoldyn/smoldyn_data.py -> build/lib/simulariumio/smoldyn copying simulariumio/smoldyn/smoldyn_converter.py -> build/lib/simulariumio/smoldyn copying simulariumio/smoldyn/__init__.py -> build/lib/simulariumio/smoldyn creating build/lib/simulariumio/readers copying simulariumio/readers/simularium_binary_reader.py -> build/lib/simulariumio/readers copying simulariumio/readers/binary_info.py -> build/lib/simulariumio/readers copying simulariumio/readers/__init__.py -> build/lib/simulariumio/readers creating build/lib/simulariumio/readdy copying simulariumio/readdy/readdy_data.py -> build/lib/simulariumio/readdy copying simulariumio/readdy/readdy_converter.py -> build/lib/simulariumio/readdy copying simulariumio/readdy/__init__.py -> build/lib/simulariumio/readdy creating build/lib/simulariumio/plot_readers copying simulariumio/plot_readers/scatter_plot_reader.py -> build/lib/simulariumio/plot_readers copying simulariumio/plot_readers/plot_reader.py -> build/lib/simulariumio/plot_readers copying simulariumio/plot_readers/histogram_plot_reader.py -> build/lib/simulariumio/plot_readers copying simulariumio/plot_readers/__init__.py -> build/lib/simulariumio/plot_readers creating build/lib/simulariumio/physicell copying simulariumio/physicell/physicell_data.py -> build/lib/simulariumio/physicell copying simulariumio/physicell/physicell_converter.py -> build/lib/simulariumio/physicell copying simulariumio/physicell/__init__.py -> build/lib/simulariumio/physicell creating build/lib/simulariumio/medyan copying simulariumio/medyan/medyan_data.py -> build/lib/simulariumio/medyan copying simulariumio/medyan/medyan_converter.py -> build/lib/simulariumio/medyan copying simulariumio/medyan/__init__.py -> build/lib/simulariumio/medyan creating build/lib/simulariumio/md copying simulariumio/md/md_data.py -> build/lib/simulariumio/md copying simulariumio/md/md_converter.py -> build/lib/simulariumio/md copying simulariumio/md/__init__.py -> build/lib/simulariumio/md creating build/lib/simulariumio/mcell copying simulariumio/mcell/mcell_data.py -> build/lib/simulariumio/mcell copying simulariumio/mcell/mcell_converter.py -> build/lib/simulariumio/mcell copying simulariumio/mcell/__init__.py -> build/lib/simulariumio/mcell creating build/lib/simulariumio/filters copying simulariumio/filters/translate_filter.py -> build/lib/simulariumio/filters copying simulariumio/filters/transform_spatial_axes_filter.py -> build/lib/simulariumio/filters copying simulariumio/filters/multiply_time_filter.py -> build/lib/simulariumio/filters copying simulariumio/filters/multiply_space_filter.py -> build/lib/simulariumio/filters copying simulariumio/filters/filter.py -> build/lib/simulariumio/filters copying simulariumio/filters/every_nth_timestep_filter.py -> build/lib/simulariumio/filters copying simulariumio/filters/every_nth_subpoint_filter.py -> build/lib/simulariumio/filters copying simulariumio/filters/every_nth_agent_filter.py -> build/lib/simulariumio/filters copying simulariumio/filters/add_agents_filter.py -> build/lib/simulariumio/filters copying simulariumio/filters/__init__.py -> build/lib/simulariumio/filters creating build/lib/simulariumio/data_objects copying simulariumio/data_objects/unit_data.py -> build/lib/simulariumio/data_objects copying simulariumio/data_objects/trajectory_data.py -> build/lib/simulariumio/data_objects copying simulariumio/data_objects/scatter_plot_data.py -> build/lib/simulariumio/data_objects copying simulariumio/data_objects/model_meta_data.py -> build/lib/simulariumio/data_objects copying simulariumio/data_objects/meta_data.py -> build/lib/simulariumio/data_objects copying simulariumio/data_objects/input_file_data.py -> build/lib/simulariumio/data_objects copying simulariumio/data_objects/histogram_plot_data.py -> build/lib/simulariumio/data_objects copying simulariumio/data_objects/display_data.py -> build/lib/simulariumio/data_objects copying simulariumio/data_objects/dimension_data.py -> build/lib/simulariumio/data_objects copying simulariumio/data_objects/camera_data.py -> build/lib/simulariumio/data_objects copying simulariumio/data_objects/agent_data.py -> build/lib/simulariumio/data_objects copying simulariumio/data_objects/__init__.py -> build/lib/simulariumio/data_objects creating build/lib/simulariumio/cytosim copying simulariumio/cytosim/cytosim_object_info.py -> build/lib/simulariumio/cytosim copying simulariumio/cytosim/cytosim_data.py -> build/lib/simulariumio/cytosim copying simulariumio/cytosim/cytosim_converter.py -> build/lib/simulariumio/cytosim copying simulariumio/cytosim/__init__.py -> build/lib/simulariumio/cytosim creating build/lib/simulariumio/cellpack copying simulariumio/cellpack/cellpack_data.py -> build/lib/simulariumio/cellpack copying simulariumio/cellpack/cellpack_converter.py -> build/lib/simulariumio/cellpack copying simulariumio/cellpack/__init__.py -> build/lib/simulariumio/cellpack creating build/lib/simulariumio/tests/writers copying simulariumio/tests/writers/test_binary_writer.py -> build/lib/simulariumio/tests/writers creating build/lib/simulariumio/tests/readers copying simulariumio/tests/readers/test_binary_reader.py -> build/lib/simulariumio/tests/readers creating build/lib/simulariumio/tests/plot_readers copying simulariumio/tests/plot_readers/test_scatter_plot_reader.py -> build/lib/simulariumio/tests/plot_readers copying simulariumio/tests/plot_readers/test_histogram_plot_reader.py -> build/lib/simulariumio/tests/plot_readers creating build/lib/simulariumio/tests/filters copying simulariumio/tests/filters/test_translate_filter_sphere_groups.py -> build/lib/simulariumio/tests/filters copying simulariumio/tests/filters/test_translate_filter.py -> build/lib/simulariumio/tests/filters copying simulariumio/tests/filters/test_transform_spatial_axes_filter.py -> build/lib/simulariumio/tests/filters copying simulariumio/tests/filters/test_multiply_time_filter.py -> build/lib/simulariumio/tests/filters copying simulariumio/tests/filters/test_multiply_space_filter.py -> build/lib/simulariumio/tests/filters copying simulariumio/tests/filters/test_every_nth_timestep_filter.py -> build/lib/simulariumio/tests/filters copying simulariumio/tests/filters/test_every_nth_subpoint_filter.py -> build/lib/simulariumio/tests/filters copying simulariumio/tests/filters/test_every_nth_agent_filter.py -> build/lib/simulariumio/tests/filters copying simulariumio/tests/filters/test_add_agents_filter.py -> build/lib/simulariumio/tests/filters creating build/lib/simulariumio/tests/converters copying simulariumio/tests/converters/test_trajectory_converter.py -> build/lib/simulariumio/tests/converters copying simulariumio/tests/converters/test_springsalad_converter.py -> build/lib/simulariumio/tests/converters copying simulariumio/tests/converters/test_smoldyn_converter.py -> build/lib/simulariumio/tests/converters copying simulariumio/tests/converters/test_readdy_converter.py -> build/lib/simulariumio/tests/converters copying simulariumio/tests/converters/test_physicell_converter.py -> build/lib/simulariumio/tests/converters copying simulariumio/tests/converters/test_medyan_converter.py -> build/lib/simulariumio/tests/converters copying simulariumio/tests/converters/test_md_converter.py -> build/lib/simulariumio/tests/converters copying simulariumio/tests/converters/test_mcell_converter.py -> build/lib/simulariumio/tests/converters copying simulariumio/tests/converters/test_cytosim_converter.py -> build/lib/simulariumio/tests/converters copying simulariumio/tests/converters/test_cellpack_converter.py -> build/lib/simulariumio/tests/converters creating build/lib/simulariumio/tests/buffer copying simulariumio/tests/buffer/test_buffer_size.py -> build/lib/simulariumio/tests/buffer copying simulariumio/tests/buffer/test_buffer_contents.py -> build/lib/simulariumio/tests/buffer creating build/lib/simulariumio/physicell/dep copying simulariumio/physicell/dep/pyMCDS.py -> build/lib/simulariumio/physicell/dep copying simulariumio/physicell/dep/__init__.py -> build/lib/simulariumio/physicell/dep running egg_info writing simulariumio.egg-info/PKG-INFO writing dependency_links to simulariumio.egg-info/dependency_links.txt writing requirements to simulariumio.egg-info/requires.txt writing top-level names to simulariumio.egg-info/top_level.txt reading manifest file 'simulariumio.egg-info/SOURCES.txt' adding license file 'LICENSE' writing manifest file 'simulariumio.egg-info/SOURCES.txt' creating build/lib/ui-templates copying ui-templates/README.md -> build/lib/ui-templates copying ui-templates/base_types.json -> build/lib/ui-templates copying ui-templates/cellpack_data.json -> build/lib/ui-templates copying ui-templates/cytosim_data.json -> build/lib/ui-templates copying ui-templates/medyan_data.json -> build/lib/ui-templates copying ui-templates/smoldyn_data.json -> build/lib/ui-templates copying ui-templates/springsalad_data.json -> build/lib/ui-templates copying examples/Tutorial_cellpack.ipynb -> build/lib/examples copying examples/Tutorial_custom.ipynb -> build/lib/examples copying examples/Tutorial_cytosim.ipynb -> build/lib/examples copying examples/Tutorial_filters.ipynb -> build/lib/examples copying examples/Tutorial_mcell.ipynb -> build/lib/examples copying examples/Tutorial_md.ipynb -> build/lib/examples copying examples/Tutorial_medyan.ipynb -> build/lib/examples copying examples/Tutorial_physicell.ipynb -> build/lib/examples copying examples/Tutorial_plots.ipynb -> build/lib/examples copying examples/Tutorial_readdy.ipynb -> build/lib/examples copying examples/Tutorial_smoldyn.ipynb -> build/lib/examples copying examples/Tutorial_springsalad.ipynb -> build/lib/examples copying docs/contributing.rst -> build/lib/docs copying docs/index.rst -> build/lib/docs copying docs/installation.rst -> build/lib/docs copying docs/modules.rst -> build/lib/docs copying benchmarks/README.md -> build/lib/benchmarks copying benchmarks/TEST_RESOURCES_HASH.txt -> build/lib/benchmarks creating build/lib/ui-templates/custom-types copying ui-templates/custom-types/camera_data.json -> build/lib/ui-templates/custom-types copying ui-templates/custom-types/coordinates_xyz.json -> build/lib/ui-templates/custom-types copying ui-templates/custom-types/cytosim_object_info.json -> build/lib/ui-templates/custom-types copying ui-templates/custom-types/display_data.json -> build/lib/ui-templates/custom-types copying ui-templates/custom-types/meta_data.json -> build/lib/ui-templates/custom-types copying ui-templates/custom-types/model_meta_data.json -> build/lib/ui-templates/custom-types copying ui-templates/custom-types/space_unit_data.json -> build/lib/ui-templates/custom-types copying ui-templates/custom-types/time_unit_data.json -> build/lib/ui-templates/custom-types creating build/lib/simulariumio/package_data copying simulariumio/package_data/jmolcolors.csv -> build/lib/simulariumio/package_data creating build/lib/simulariumio/tests/data creating build/lib/simulariumio/tests/data/springsalad copying simulariumio/tests/data/springsalad/Simulation0_SIM_VIEW_Run0.txt -> build/lib/simulariumio/tests/data/springsalad copying simulariumio/tests/data/springsalad/test.txt -> build/lib/simulariumio/tests/data/springsalad creating build/lib/simulariumio/tests/data/smoldyn copying simulariumio/tests/data/smoldyn/example_2D.txt -> build/lib/simulariumio/tests/data/smoldyn copying simulariumio/tests/data/smoldyn/example_3D.txt -> build/lib/simulariumio/tests/data/smoldyn copying simulariumio/tests/data/smoldyn/example_data.txt -> build/lib/simulariumio/tests/data/smoldyn creating build/lib/simulariumio/tests/data/readdy copying simulariumio/tests/data/readdy/test.h5 -> build/lib/simulariumio/tests/data/readdy creating build/lib/simulariumio/tests/data/medyan copying simulariumio/tests/data/medyan/snapshot.traj -> build/lib/simulariumio/tests/data/medyan copying simulariumio/tests/data/medyan/test.traj -> build/lib/simulariumio/tests/data/medyan creating build/lib/simulariumio/tests/data/md copying simulariumio/tests/data/md/example.xyz -> build/lib/simulariumio/tests/data/md creating build/lib/simulariumio/tests/data/mcell copying simulariumio/tests/data/mcell/organelle_model_example.blend -> build/lib/simulariumio/tests/data/mcell creating build/lib/simulariumio/tests/data/malformed_data copying simulariumio/tests/data/malformed_data/malformed_cytosim.txt -> build/lib/simulariumio/tests/data/malformed_data copying simulariumio/tests/data/malformed_data/malformed_medyan.traj -> build/lib/simulariumio/tests/data/malformed_data copying simulariumio/tests/data/malformed_data/malformed_smoldyn.txt -> build/lib/simulariumio/tests/data/malformed_data copying simulariumio/tests/data/malformed_data/springsalad_broken_link.txt -> build/lib/simulariumio/tests/data/malformed_data creating build/lib/simulariumio/tests/data/cellpack copying simulariumio/tests/data/cellpack/example_2D_recipe.json -> build/lib/simulariumio/tests/data/cellpack copying simulariumio/tests/data/cellpack/example_2D_results.json -> build/lib/simulariumio/tests/data/cellpack copying simulariumio/tests/data/cellpack/mock_recipe.json -> build/lib/simulariumio/tests/data/cellpack copying simulariumio/tests/data/cellpack/mock_results.json -> build/lib/simulariumio/tests/data/cellpack copying simulariumio/tests/data/cellpack/two_ingredients_recipe.json -> build/lib/simulariumio/tests/data/cellpack copying simulariumio/tests/data/cellpack/two_ingredients_results.json -> build/lib/simulariumio/tests/data/cellpack creating build/lib/simulariumio/tests/data/binary copying simulariumio/tests/data/binary/50filaments_motor_linker_binary.binary -> build/lib/simulariumio/tests/data/binary copying simulariumio/tests/data/binary/binary_test.binary -> build/lib/simulariumio/tests/data/binary creating build/lib/simulariumio/tests/data/physicell creating build/lib/simulariumio/tests/data/physicell/subcell_output copying simulariumio/tests/data/physicell/subcell_output/initial.xml -> build/lib/simulariumio/tests/data/physicell/subcell_output copying simulariumio/tests/data/physicell/subcell_output/initial_cells.mat -> build/lib/simulariumio/tests/data/physicell/subcell_output copying simulariumio/tests/data/physicell/subcell_output/initial_cells_physicell.mat -> build/lib/simulariumio/tests/data/physicell/subcell_output copying simulariumio/tests/data/physicell/subcell_output/initial_mesh0.mat -> build/lib/simulariumio/tests/data/physicell/subcell_output copying simulariumio/tests/data/physicell/subcell_output/initial_microenvironment0.mat -> build/lib/simulariumio/tests/data/physicell/subcell_output copying simulariumio/tests/data/physicell/subcell_output/output00000000.xml -> build/lib/simulariumio/tests/data/physicell/subcell_output copying simulariumio/tests/data/physicell/subcell_output/output00000000_cells.mat -> build/lib/simulariumio/tests/data/physicell/subcell_output copying simulariumio/tests/data/physicell/subcell_output/output00000000_cells_physicell.mat -> build/lib/simulariumio/tests/data/physicell/subcell_output copying simulariumio/tests/data/physicell/subcell_output/output00000000_microenvironment0.mat -> build/lib/simulariumio/tests/data/physicell/subcell_output copying simulariumio/tests/data/physicell/subcell_output/output00000001.xml -> build/lib/simulariumio/tests/data/physicell/subcell_output copying simulariumio/tests/data/physicell/subcell_output/output00000001_cells.mat -> build/lib/simulariumio/tests/data/physicell/subcell_output copying simulariumio/tests/data/physicell/subcell_output/output00000001_cells_physicell.mat -> build/lib/simulariumio/tests/data/physicell/subcell_output copying simulariumio/tests/data/physicell/subcell_output/output00000001_microenvironment0.mat -> build/lib/simulariumio/tests/data/physicell/subcell_output copying simulariumio/tests/data/physicell/subcell_output/output00000002.xml -> build/lib/simulariumio/tests/data/physicell/subcell_output copying simulariumio/tests/data/physicell/subcell_output/output00000002_cells.mat -> build/lib/simulariumio/tests/data/physicell/subcell_output copying simulariumio/tests/data/physicell/subcell_output/output00000002_cells_physicell.mat -> build/lib/simulariumio/tests/data/physicell/subcell_output copying simulariumio/tests/data/physicell/subcell_output/output00000002_microenvironment0.mat -> build/lib/simulariumio/tests/data/physicell/subcell_output creating build/lib/simulariumio/tests/data/physicell/default_output copying simulariumio/tests/data/physicell/default_output/initial.xml -> build/lib/simulariumio/tests/data/physicell/default_output copying simulariumio/tests/data/physicell/default_output/initial_cells.mat -> build/lib/simulariumio/tests/data/physicell/default_output copying simulariumio/tests/data/physicell/default_output/initial_cells_physicell.mat -> build/lib/simulariumio/tests/data/physicell/default_output copying simulariumio/tests/data/physicell/default_output/initial_mesh0.mat -> build/lib/simulariumio/tests/data/physicell/default_output copying simulariumio/tests/data/physicell/default_output/initial_microenvironment0.mat -> build/lib/simulariumio/tests/data/physicell/default_output copying simulariumio/tests/data/physicell/default_output/output00000000.xml -> build/lib/simulariumio/tests/data/physicell/default_output copying simulariumio/tests/data/physicell/default_output/output00000000_cells.mat -> build/lib/simulariumio/tests/data/physicell/default_output copying simulariumio/tests/data/physicell/default_output/output00000000_cells_physicell.mat -> build/lib/simulariumio/tests/data/physicell/default_output copying simulariumio/tests/data/physicell/default_output/output00000000_microenvironment0.mat -> build/lib/simulariumio/tests/data/physicell/default_output copying simulariumio/tests/data/physicell/default_output/output00000001.xml -> build/lib/simulariumio/tests/data/physicell/default_output copying simulariumio/tests/data/physicell/default_output/output00000001_cells.mat -> build/lib/simulariumio/tests/data/physicell/default_output copying simulariumio/tests/data/physicell/default_output/output00000001_cells_physicell.mat -> build/lib/simulariumio/tests/data/physicell/default_output copying simulariumio/tests/data/physicell/default_output/output00000001_microenvironment0.mat -> build/lib/simulariumio/tests/data/physicell/default_output copying simulariumio/tests/data/physicell/default_output/output00000002.xml -> build/lib/simulariumio/tests/data/physicell/default_output copying simulariumio/tests/data/physicell/default_output/output00000002_cells.mat -> build/lib/simulariumio/tests/data/physicell/default_output copying simulariumio/tests/data/physicell/default_output/output00000002_cells_physicell.mat -> build/lib/simulariumio/tests/data/physicell/default_output copying simulariumio/tests/data/physicell/default_output/output00000002_microenvironment0.mat -> build/lib/simulariumio/tests/data/physicell/default_output creating build/lib/simulariumio/tests/data/mcell/organelle_model_viz_output copying simulariumio/tests/data/mcell/organelle_model_viz_output/Scene.cellbin.0.dat -> build/lib/simulariumio/tests/data/mcell/organelle_model_viz_output copying simulariumio/tests/data/mcell/organelle_model_viz_output/Scene.cellbin.1.dat -> build/lib/simulariumio/tests/data/mcell/organelle_model_viz_output copying simulariumio/tests/data/mcell/organelle_model_viz_output/Scene.cellbin.2.dat -> build/lib/simulariumio/tests/data/mcell/organelle_model_viz_output copying simulariumio/tests/data/mcell/organelle_model_viz_output/Scene.data_model.00.json -> build/lib/simulariumio/tests/data/mcell/organelle_model_viz_output creating build/lib/simulariumio/tests/data/mcell/organelle_model_example_files copying simulariumio/tests/data/mcell/organelle_model_example_files/start_time.txt -> build/lib/simulariumio/tests/data/mcell/organelle_model_example_files creating build/lib/simulariumio/tests/data/mcell/organelle_model_example_files/mcell copying simulariumio/tests/data/mcell/organelle_model_example_files/mcell/data_layout.json -> build/lib/simulariumio/tests/data/mcell/organelle_model_example_files/mcell creating build/lib/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data copying simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/Scene.geometry.mdl -> build/lib/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data copying simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/Scene.initialization.mdl -> build/lib/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data copying simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/Scene.instantiation.mdl -> build/lib/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data copying simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/Scene.main.mdl -> build/lib/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data copying simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/Scene.mod_surf_regions.mdl -> build/lib/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data copying simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/Scene.molecules.mdl -> build/lib/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data copying simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/Scene.parameters.mdl -> build/lib/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data copying simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/Scene.reactions.mdl -> build/lib/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data copying simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/Scene.release_patterns.mdl -> build/lib/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data copying simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/Scene.rxn_output.mdl -> build/lib/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data copying simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/Scene.surface_classes.mdl -> build/lib/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data copying simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/Scene.viz_output.mdl -> build/lib/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data creating build/lib/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/viz_data creating build/lib/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/viz_data/seed_00001 copying simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/viz_data/seed_00001/Scene.cellbin.0.dat -> build/lib/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/viz_data/seed_00001 copying simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/viz_data/seed_00001/Scene.cellbin.1.dat -> build/lib/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/viz_data/seed_00001 copying simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/viz_data/seed_00001/Scene.cellbin.2.dat -> build/lib/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/viz_data/seed_00001 creating build/lib/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/react_data creating build/lib/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/react_data/seed_00001 copying simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/react_data/seed_00001/a.World.dat -> build/lib/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/react_data/seed_00001 copying simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/react_data/seed_00001/b.World.dat -> build/lib/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/react_data/seed_00001 copying simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/react_data/seed_00001/c.World.dat -> build/lib/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/react_data/seed_00001 copying simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/react_data/seed_00001/d.World.dat -> build/lib/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/react_data/seed_00001 creating build/lib/simulariumio/tests/data/cytosim creating build/lib/simulariumio/tests/data/cytosim/fiber_test copying simulariumio/tests/data/cytosim/fiber_test/fiber_points.txt -> build/lib/simulariumio/tests/data/cytosim/fiber_test creating build/lib/simulariumio/tests/data/cytosim/aster_pull3D_couples_actin_solid_3_frames copying simulariumio/tests/data/cytosim/aster_pull3D_couples_actin_solid_3_frames/aster_pull3D_couple_actin_solid.cym -> build/lib/simulariumio/tests/data/cytosim/aster_pull3D_couples_actin_solid_3_frames copying simulariumio/tests/data/cytosim/aster_pull3D_couples_actin_solid_3_frames/aster_pull3D_couples_actin_solid_3_frames.json -> build/lib/simulariumio/tests/data/cytosim/aster_pull3D_couples_actin_solid_3_frames copying simulariumio/tests/data/cytosim/aster_pull3D_couples_actin_solid_3_frames/aster_pull3D_couples_actin_solid_3_frames_small.json -> build/lib/simulariumio/tests/data/cytosim/aster_pull3D_couples_actin_solid_3_frames copying simulariumio/tests/data/cytosim/aster_pull3D_couples_actin_solid_3_frames/couples.txt -> build/lib/simulariumio/tests/data/cytosim/aster_pull3D_couples_actin_solid_3_frames copying simulariumio/tests/data/cytosim/aster_pull3D_couples_actin_solid_3_frames/fiber_points.txt -> build/lib/simulariumio/tests/data/cytosim/aster_pull3D_couples_actin_solid_3_frames copying simulariumio/tests/data/cytosim/aster_pull3D_couples_actin_solid_3_frames/singles.txt -> build/lib/simulariumio/tests/data/cytosim/aster_pull3D_couples_actin_solid_3_frames copying simulariumio/tests/data/cytosim/aster_pull3D_couples_actin_solid_3_frames/solids.txt -> build/lib/simulariumio/tests/data/cytosim/aster_pull3D_couples_actin_solid_3_frames creating build/lib/simulariumio/tests/data/cytosim/aster_pull3D_couples_actin_solid copying simulariumio/tests/data/cytosim/aster_pull3D_couples_actin_solid/aster_pull3D_couple_actin_solid.cym -> build/lib/simulariumio/tests/data/cytosim/aster_pull3D_couples_actin_solid copying simulariumio/tests/data/cytosim/aster_pull3D_couples_actin_solid/couples.txt -> build/lib/simulariumio/tests/data/cytosim/aster_pull3D_couples_actin_solid copying simulariumio/tests/data/cytosim/aster_pull3D_couples_actin_solid/fiber_points.txt -> build/lib/simulariumio/tests/data/cytosim/aster_pull3D_couples_actin_solid copying simulariumio/tests/data/cytosim/aster_pull3D_couples_actin_solid/singles.txt -> build/lib/simulariumio/tests/data/cytosim/aster_pull3D_couples_actin_solid copying simulariumio/tests/data/cytosim/aster_pull3D_couples_actin_solid/solids.txt -> build/lib/simulariumio/tests/data/cytosim/aster_pull3D_couples_actin_solid creating build/lib/simulariumio/tests/data/cytosim/3_fibers_3_frames copying simulariumio/tests/data/cytosim/3_fibers_3_frames/fiber_points.txt -> build/lib/simulariumio/tests/data/cytosim/3_fibers_3_frames copying simulariumio/tests/data/cytosim/3_fibers_3_frames/test.txt -> build/lib/simulariumio/tests/data/cytosim/3_fibers_3_frames creating build/lib/examples/img copying examples/img/drag_drop.gif -> build/lib/examples/img installing to build/bdist.linux-x86_64/wheel running install running install_lib creating build/bdist.linux-x86_64 creating build/bdist.linux-x86_64/wheel creating build/bdist.linux-x86_64/wheel/ui-templates creating build/bdist.linux-x86_64/wheel/ui-templates/custom-types copying build/lib/ui-templates/custom-types/time_unit_data.json -> build/bdist.linux-x86_64/wheel/ui-templates/custom-types copying build/lib/ui-templates/custom-types/space_unit_data.json -> build/bdist.linux-x86_64/wheel/ui-templates/custom-types copying build/lib/ui-templates/custom-types/model_meta_data.json -> build/bdist.linux-x86_64/wheel/ui-templates/custom-types copying build/lib/ui-templates/custom-types/meta_data.json -> build/bdist.linux-x86_64/wheel/ui-templates/custom-types copying build/lib/ui-templates/custom-types/display_data.json -> build/bdist.linux-x86_64/wheel/ui-templates/custom-types copying build/lib/ui-templates/custom-types/cytosim_object_info.json -> build/bdist.linux-x86_64/wheel/ui-templates/custom-types copying build/lib/ui-templates/custom-types/coordinates_xyz.json -> build/bdist.linux-x86_64/wheel/ui-templates/custom-types copying build/lib/ui-templates/custom-types/camera_data.json -> build/bdist.linux-x86_64/wheel/ui-templates/custom-types copying build/lib/ui-templates/springsalad_data.json -> build/bdist.linux-x86_64/wheel/ui-templates copying build/lib/ui-templates/smoldyn_data.json -> build/bdist.linux-x86_64/wheel/ui-templates copying build/lib/ui-templates/medyan_data.json -> build/bdist.linux-x86_64/wheel/ui-templates copying build/lib/ui-templates/cytosim_data.json -> build/bdist.linux-x86_64/wheel/ui-templates copying build/lib/ui-templates/cellpack_data.json -> build/bdist.linux-x86_64/wheel/ui-templates copying build/lib/ui-templates/base_types.json -> build/bdist.linux-x86_64/wheel/ui-templates copying build/lib/ui-templates/README.md -> build/bdist.linux-x86_64/wheel/ui-templates creating build/bdist.linux-x86_64/wheel/benchmarks copying build/lib/benchmarks/TEST_RESOURCES_HASH.txt -> build/bdist.linux-x86_64/wheel/benchmarks copying build/lib/benchmarks/README.md -> build/bdist.linux-x86_64/wheel/benchmarks copying build/lib/benchmarks/benchmark_simulariumio.py -> build/bdist.linux-x86_64/wheel/benchmarks copying build/lib/benchmarks/download_benchmark_resources.py -> build/bdist.linux-x86_64/wheel/benchmarks copying build/lib/benchmarks/upload_benchmark_resources.py -> build/bdist.linux-x86_64/wheel/benchmarks creating build/bdist.linux-x86_64/wheel/docs copying build/lib/docs/modules.rst -> build/bdist.linux-x86_64/wheel/docs copying build/lib/docs/installation.rst -> build/bdist.linux-x86_64/wheel/docs copying build/lib/docs/index.rst -> build/bdist.linux-x86_64/wheel/docs copying build/lib/docs/contributing.rst -> build/bdist.linux-x86_64/wheel/docs copying build/lib/docs/conf.py -> build/bdist.linux-x86_64/wheel/docs creating build/bdist.linux-x86_64/wheel/examples creating build/bdist.linux-x86_64/wheel/examples/img copying build/lib/examples/img/drag_drop.gif -> build/bdist.linux-x86_64/wheel/examples/img copying build/lib/examples/Tutorial_springsalad.ipynb -> build/bdist.linux-x86_64/wheel/examples copying build/lib/examples/Tutorial_smoldyn.ipynb -> build/bdist.linux-x86_64/wheel/examples copying build/lib/examples/Tutorial_readdy.ipynb -> build/bdist.linux-x86_64/wheel/examples copying build/lib/examples/Tutorial_plots.ipynb -> build/bdist.linux-x86_64/wheel/examples copying build/lib/examples/Tutorial_physicell.ipynb -> build/bdist.linux-x86_64/wheel/examples copying build/lib/examples/Tutorial_medyan.ipynb -> build/bdist.linux-x86_64/wheel/examples copying build/lib/examples/Tutorial_md.ipynb -> build/bdist.linux-x86_64/wheel/examples copying build/lib/examples/Tutorial_mcell.ipynb -> build/bdist.linux-x86_64/wheel/examples copying build/lib/examples/Tutorial_filters.ipynb -> build/bdist.linux-x86_64/wheel/examples copying build/lib/examples/Tutorial_cytosim.ipynb -> build/bdist.linux-x86_64/wheel/examples copying build/lib/examples/Tutorial_custom.ipynb -> build/bdist.linux-x86_64/wheel/examples copying build/lib/examples/Tutorial_cellpack.ipynb -> build/bdist.linux-x86_64/wheel/examples copying build/lib/examples/__init__.py -> build/bdist.linux-x86_64/wheel/examples creating build/bdist.linux-x86_64/wheel/simulariumio creating build/bdist.linux-x86_64/wheel/simulariumio/package_data copying build/lib/simulariumio/package_data/jmolcolors.csv -> build/bdist.linux-x86_64/wheel/simulariumio/package_data creating build/bdist.linux-x86_64/wheel/simulariumio/cellpack copying build/lib/simulariumio/cellpack/__init__.py -> build/bdist.linux-x86_64/wheel/simulariumio/cellpack copying build/lib/simulariumio/cellpack/cellpack_converter.py -> build/bdist.linux-x86_64/wheel/simulariumio/cellpack copying build/lib/simulariumio/cellpack/cellpack_data.py -> build/bdist.linux-x86_64/wheel/simulariumio/cellpack creating build/bdist.linux-x86_64/wheel/simulariumio/cytosim copying build/lib/simulariumio/cytosim/__init__.py -> build/bdist.linux-x86_64/wheel/simulariumio/cytosim copying build/lib/simulariumio/cytosim/cytosim_converter.py -> build/bdist.linux-x86_64/wheel/simulariumio/cytosim copying build/lib/simulariumio/cytosim/cytosim_data.py -> build/bdist.linux-x86_64/wheel/simulariumio/cytosim copying build/lib/simulariumio/cytosim/cytosim_object_info.py -> build/bdist.linux-x86_64/wheel/simulariumio/cytosim creating build/bdist.linux-x86_64/wheel/simulariumio/data_objects copying build/lib/simulariumio/data_objects/__init__.py -> build/bdist.linux-x86_64/wheel/simulariumio/data_objects copying build/lib/simulariumio/data_objects/agent_data.py -> build/bdist.linux-x86_64/wheel/simulariumio/data_objects copying build/lib/simulariumio/data_objects/camera_data.py -> build/bdist.linux-x86_64/wheel/simulariumio/data_objects copying build/lib/simulariumio/data_objects/dimension_data.py -> build/bdist.linux-x86_64/wheel/simulariumio/data_objects copying build/lib/simulariumio/data_objects/display_data.py -> build/bdist.linux-x86_64/wheel/simulariumio/data_objects copying build/lib/simulariumio/data_objects/histogram_plot_data.py -> build/bdist.linux-x86_64/wheel/simulariumio/data_objects copying build/lib/simulariumio/data_objects/input_file_data.py -> build/bdist.linux-x86_64/wheel/simulariumio/data_objects copying build/lib/simulariumio/data_objects/meta_data.py -> build/bdist.linux-x86_64/wheel/simulariumio/data_objects copying build/lib/simulariumio/data_objects/model_meta_data.py -> build/bdist.linux-x86_64/wheel/simulariumio/data_objects copying build/lib/simulariumio/data_objects/scatter_plot_data.py -> build/bdist.linux-x86_64/wheel/simulariumio/data_objects copying build/lib/simulariumio/data_objects/trajectory_data.py -> build/bdist.linux-x86_64/wheel/simulariumio/data_objects copying build/lib/simulariumio/data_objects/unit_data.py -> build/bdist.linux-x86_64/wheel/simulariumio/data_objects creating build/bdist.linux-x86_64/wheel/simulariumio/filters copying build/lib/simulariumio/filters/__init__.py -> build/bdist.linux-x86_64/wheel/simulariumio/filters copying build/lib/simulariumio/filters/add_agents_filter.py -> build/bdist.linux-x86_64/wheel/simulariumio/filters copying build/lib/simulariumio/filters/every_nth_agent_filter.py -> build/bdist.linux-x86_64/wheel/simulariumio/filters copying build/lib/simulariumio/filters/every_nth_subpoint_filter.py -> build/bdist.linux-x86_64/wheel/simulariumio/filters copying build/lib/simulariumio/filters/every_nth_timestep_filter.py -> build/bdist.linux-x86_64/wheel/simulariumio/filters copying build/lib/simulariumio/filters/filter.py -> build/bdist.linux-x86_64/wheel/simulariumio/filters copying build/lib/simulariumio/filters/multiply_space_filter.py -> build/bdist.linux-x86_64/wheel/simulariumio/filters copying build/lib/simulariumio/filters/multiply_time_filter.py -> build/bdist.linux-x86_64/wheel/simulariumio/filters copying build/lib/simulariumio/filters/transform_spatial_axes_filter.py -> build/bdist.linux-x86_64/wheel/simulariumio/filters copying build/lib/simulariumio/filters/translate_filter.py -> build/bdist.linux-x86_64/wheel/simulariumio/filters creating build/bdist.linux-x86_64/wheel/simulariumio/mcell copying build/lib/simulariumio/mcell/__init__.py -> build/bdist.linux-x86_64/wheel/simulariumio/mcell copying build/lib/simulariumio/mcell/mcell_converter.py -> build/bdist.linux-x86_64/wheel/simulariumio/mcell copying build/lib/simulariumio/mcell/mcell_data.py -> build/bdist.linux-x86_64/wheel/simulariumio/mcell creating build/bdist.linux-x86_64/wheel/simulariumio/md copying build/lib/simulariumio/md/__init__.py -> build/bdist.linux-x86_64/wheel/simulariumio/md copying build/lib/simulariumio/md/md_converter.py -> build/bdist.linux-x86_64/wheel/simulariumio/md copying build/lib/simulariumio/md/md_data.py -> build/bdist.linux-x86_64/wheel/simulariumio/md creating build/bdist.linux-x86_64/wheel/simulariumio/medyan copying build/lib/simulariumio/medyan/__init__.py -> build/bdist.linux-x86_64/wheel/simulariumio/medyan copying build/lib/simulariumio/medyan/medyan_converter.py -> build/bdist.linux-x86_64/wheel/simulariumio/medyan copying build/lib/simulariumio/medyan/medyan_data.py -> build/bdist.linux-x86_64/wheel/simulariumio/medyan creating build/bdist.linux-x86_64/wheel/simulariumio/physicell creating build/bdist.linux-x86_64/wheel/simulariumio/physicell/dep copying build/lib/simulariumio/physicell/dep/__init__.py -> build/bdist.linux-x86_64/wheel/simulariumio/physicell/dep copying build/lib/simulariumio/physicell/dep/pyMCDS.py -> build/bdist.linux-x86_64/wheel/simulariumio/physicell/dep copying build/lib/simulariumio/physicell/__init__.py -> build/bdist.linux-x86_64/wheel/simulariumio/physicell copying build/lib/simulariumio/physicell/physicell_converter.py -> build/bdist.linux-x86_64/wheel/simulariumio/physicell copying build/lib/simulariumio/physicell/physicell_data.py -> build/bdist.linux-x86_64/wheel/simulariumio/physicell creating build/bdist.linux-x86_64/wheel/simulariumio/plot_readers copying build/lib/simulariumio/plot_readers/__init__.py -> build/bdist.linux-x86_64/wheel/simulariumio/plot_readers copying build/lib/simulariumio/plot_readers/histogram_plot_reader.py -> build/bdist.linux-x86_64/wheel/simulariumio/plot_readers copying build/lib/simulariumio/plot_readers/plot_reader.py -> build/bdist.linux-x86_64/wheel/simulariumio/plot_readers copying build/lib/simulariumio/plot_readers/scatter_plot_reader.py -> build/bdist.linux-x86_64/wheel/simulariumio/plot_readers creating build/bdist.linux-x86_64/wheel/simulariumio/readdy copying build/lib/simulariumio/readdy/__init__.py -> build/bdist.linux-x86_64/wheel/simulariumio/readdy copying build/lib/simulariumio/readdy/readdy_converter.py -> build/bdist.linux-x86_64/wheel/simulariumio/readdy copying build/lib/simulariumio/readdy/readdy_data.py -> build/bdist.linux-x86_64/wheel/simulariumio/readdy creating build/bdist.linux-x86_64/wheel/simulariumio/readers copying build/lib/simulariumio/readers/__init__.py -> build/bdist.linux-x86_64/wheel/simulariumio/readers copying build/lib/simulariumio/readers/binary_info.py -> build/bdist.linux-x86_64/wheel/simulariumio/readers copying build/lib/simulariumio/readers/simularium_binary_reader.py -> build/bdist.linux-x86_64/wheel/simulariumio/readers creating build/bdist.linux-x86_64/wheel/simulariumio/smoldyn copying build/lib/simulariumio/smoldyn/__init__.py -> build/bdist.linux-x86_64/wheel/simulariumio/smoldyn copying build/lib/simulariumio/smoldyn/smoldyn_converter.py -> build/bdist.linux-x86_64/wheel/simulariumio/smoldyn copying build/lib/simulariumio/smoldyn/smoldyn_data.py -> build/bdist.linux-x86_64/wheel/simulariumio/smoldyn creating build/bdist.linux-x86_64/wheel/simulariumio/springsalad copying build/lib/simulariumio/springsalad/__init__.py -> build/bdist.linux-x86_64/wheel/simulariumio/springsalad copying build/lib/simulariumio/springsalad/springsalad_converter.py -> build/bdist.linux-x86_64/wheel/simulariumio/springsalad copying build/lib/simulariumio/springsalad/springsalad_data.py -> build/bdist.linux-x86_64/wheel/simulariumio/springsalad creating build/bdist.linux-x86_64/wheel/simulariumio/tests creating build/bdist.linux-x86_64/wheel/simulariumio/tests/data creating build/bdist.linux-x86_64/wheel/simulariumio/tests/data/cytosim creating build/bdist.linux-x86_64/wheel/simulariumio/tests/data/cytosim/3_fibers_3_frames copying build/lib/simulariumio/tests/data/cytosim/3_fibers_3_frames/test.txt -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/cytosim/3_fibers_3_frames copying build/lib/simulariumio/tests/data/cytosim/3_fibers_3_frames/fiber_points.txt -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/cytosim/3_fibers_3_frames creating build/bdist.linux-x86_64/wheel/simulariumio/tests/data/cytosim/aster_pull3D_couples_actin_solid copying build/lib/simulariumio/tests/data/cytosim/aster_pull3D_couples_actin_solid/solids.txt -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/cytosim/aster_pull3D_couples_actin_solid copying build/lib/simulariumio/tests/data/cytosim/aster_pull3D_couples_actin_solid/singles.txt -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/cytosim/aster_pull3D_couples_actin_solid copying build/lib/simulariumio/tests/data/cytosim/aster_pull3D_couples_actin_solid/fiber_points.txt -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/cytosim/aster_pull3D_couples_actin_solid copying build/lib/simulariumio/tests/data/cytosim/aster_pull3D_couples_actin_solid/couples.txt -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/cytosim/aster_pull3D_couples_actin_solid copying build/lib/simulariumio/tests/data/cytosim/aster_pull3D_couples_actin_solid/aster_pull3D_couple_actin_solid.cym -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/cytosim/aster_pull3D_couples_actin_solid creating build/bdist.linux-x86_64/wheel/simulariumio/tests/data/cytosim/aster_pull3D_couples_actin_solid_3_frames copying build/lib/simulariumio/tests/data/cytosim/aster_pull3D_couples_actin_solid_3_frames/solids.txt -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/cytosim/aster_pull3D_couples_actin_solid_3_frames copying build/lib/simulariumio/tests/data/cytosim/aster_pull3D_couples_actin_solid_3_frames/singles.txt -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/cytosim/aster_pull3D_couples_actin_solid_3_frames copying build/lib/simulariumio/tests/data/cytosim/aster_pull3D_couples_actin_solid_3_frames/fiber_points.txt -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/cytosim/aster_pull3D_couples_actin_solid_3_frames copying build/lib/simulariumio/tests/data/cytosim/aster_pull3D_couples_actin_solid_3_frames/couples.txt -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/cytosim/aster_pull3D_couples_actin_solid_3_frames copying build/lib/simulariumio/tests/data/cytosim/aster_pull3D_couples_actin_solid_3_frames/aster_pull3D_couples_actin_solid_3_frames_small.json -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/cytosim/aster_pull3D_couples_actin_solid_3_frames copying build/lib/simulariumio/tests/data/cytosim/aster_pull3D_couples_actin_solid_3_frames/aster_pull3D_couples_actin_solid_3_frames.json -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/cytosim/aster_pull3D_couples_actin_solid_3_frames copying build/lib/simulariumio/tests/data/cytosim/aster_pull3D_couples_actin_solid_3_frames/aster_pull3D_couple_actin_solid.cym -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/cytosim/aster_pull3D_couples_actin_solid_3_frames creating build/bdist.linux-x86_64/wheel/simulariumio/tests/data/cytosim/fiber_test copying build/lib/simulariumio/tests/data/cytosim/fiber_test/fiber_points.txt -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/cytosim/fiber_test creating build/bdist.linux-x86_64/wheel/simulariumio/tests/data/physicell creating build/bdist.linux-x86_64/wheel/simulariumio/tests/data/physicell/default_output copying build/lib/simulariumio/tests/data/physicell/default_output/output00000002_microenvironment0.mat -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/physicell/default_output copying build/lib/simulariumio/tests/data/physicell/default_output/output00000002_cells_physicell.mat -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/physicell/default_output copying build/lib/simulariumio/tests/data/physicell/default_output/output00000002_cells.mat -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/physicell/default_output copying build/lib/simulariumio/tests/data/physicell/default_output/output00000002.xml -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/physicell/default_output copying build/lib/simulariumio/tests/data/physicell/default_output/output00000001_microenvironment0.mat -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/physicell/default_output copying build/lib/simulariumio/tests/data/physicell/default_output/output00000001_cells_physicell.mat -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/physicell/default_output copying build/lib/simulariumio/tests/data/physicell/default_output/output00000001_cells.mat -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/physicell/default_output copying build/lib/simulariumio/tests/data/physicell/default_output/output00000001.xml -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/physicell/default_output copying build/lib/simulariumio/tests/data/physicell/default_output/output00000000_microenvironment0.mat -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/physicell/default_output copying build/lib/simulariumio/tests/data/physicell/default_output/output00000000_cells_physicell.mat -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/physicell/default_output copying build/lib/simulariumio/tests/data/physicell/default_output/output00000000_cells.mat -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/physicell/default_output copying build/lib/simulariumio/tests/data/physicell/default_output/output00000000.xml -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/physicell/default_output copying build/lib/simulariumio/tests/data/physicell/default_output/initial_microenvironment0.mat -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/physicell/default_output copying build/lib/simulariumio/tests/data/physicell/default_output/initial_mesh0.mat -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/physicell/default_output copying build/lib/simulariumio/tests/data/physicell/default_output/initial_cells_physicell.mat -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/physicell/default_output copying build/lib/simulariumio/tests/data/physicell/default_output/initial_cells.mat -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/physicell/default_output copying build/lib/simulariumio/tests/data/physicell/default_output/initial.xml -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/physicell/default_output creating build/bdist.linux-x86_64/wheel/simulariumio/tests/data/physicell/subcell_output copying build/lib/simulariumio/tests/data/physicell/subcell_output/output00000002_microenvironment0.mat -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/physicell/subcell_output copying build/lib/simulariumio/tests/data/physicell/subcell_output/output00000002_cells_physicell.mat -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/physicell/subcell_output copying build/lib/simulariumio/tests/data/physicell/subcell_output/output00000002_cells.mat -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/physicell/subcell_output copying build/lib/simulariumio/tests/data/physicell/subcell_output/output00000002.xml -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/physicell/subcell_output copying build/lib/simulariumio/tests/data/physicell/subcell_output/output00000001_microenvironment0.mat -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/physicell/subcell_output copying build/lib/simulariumio/tests/data/physicell/subcell_output/output00000001_cells_physicell.mat -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/physicell/subcell_output copying build/lib/simulariumio/tests/data/physicell/subcell_output/output00000001_cells.mat -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/physicell/subcell_output copying build/lib/simulariumio/tests/data/physicell/subcell_output/output00000001.xml -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/physicell/subcell_output copying build/lib/simulariumio/tests/data/physicell/subcell_output/output00000000_microenvironment0.mat -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/physicell/subcell_output copying build/lib/simulariumio/tests/data/physicell/subcell_output/output00000000_cells_physicell.mat -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/physicell/subcell_output copying build/lib/simulariumio/tests/data/physicell/subcell_output/output00000000_cells.mat -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/physicell/subcell_output copying build/lib/simulariumio/tests/data/physicell/subcell_output/output00000000.xml -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/physicell/subcell_output copying build/lib/simulariumio/tests/data/physicell/subcell_output/initial_microenvironment0.mat -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/physicell/subcell_output copying build/lib/simulariumio/tests/data/physicell/subcell_output/initial_mesh0.mat -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/physicell/subcell_output copying build/lib/simulariumio/tests/data/physicell/subcell_output/initial_cells_physicell.mat -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/physicell/subcell_output copying build/lib/simulariumio/tests/data/physicell/subcell_output/initial_cells.mat -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/physicell/subcell_output copying build/lib/simulariumio/tests/data/physicell/subcell_output/initial.xml -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/physicell/subcell_output creating build/bdist.linux-x86_64/wheel/simulariumio/tests/data/binary copying build/lib/simulariumio/tests/data/binary/binary_test.binary -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/binary copying build/lib/simulariumio/tests/data/binary/50filaments_motor_linker_binary.binary -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/binary creating build/bdist.linux-x86_64/wheel/simulariumio/tests/data/cellpack copying build/lib/simulariumio/tests/data/cellpack/two_ingredients_results.json -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/cellpack copying build/lib/simulariumio/tests/data/cellpack/two_ingredients_recipe.json -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/cellpack copying build/lib/simulariumio/tests/data/cellpack/mock_results.json -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/cellpack copying build/lib/simulariumio/tests/data/cellpack/mock_recipe.json -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/cellpack copying build/lib/simulariumio/tests/data/cellpack/example_2D_results.json -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/cellpack copying build/lib/simulariumio/tests/data/cellpack/example_2D_recipe.json -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/cellpack creating build/bdist.linux-x86_64/wheel/simulariumio/tests/data/malformed_data copying build/lib/simulariumio/tests/data/malformed_data/springsalad_broken_link.txt -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/malformed_data copying build/lib/simulariumio/tests/data/malformed_data/malformed_smoldyn.txt -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/malformed_data copying build/lib/simulariumio/tests/data/malformed_data/malformed_medyan.traj -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/malformed_data copying build/lib/simulariumio/tests/data/malformed_data/malformed_cytosim.txt -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/malformed_data creating build/bdist.linux-x86_64/wheel/simulariumio/tests/data/mcell creating build/bdist.linux-x86_64/wheel/simulariumio/tests/data/mcell/organelle_model_example_files creating build/bdist.linux-x86_64/wheel/simulariumio/tests/data/mcell/organelle_model_example_files/mcell creating build/bdist.linux-x86_64/wheel/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data creating build/bdist.linux-x86_64/wheel/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/react_data creating build/bdist.linux-x86_64/wheel/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/react_data/seed_00001 copying build/lib/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/react_data/seed_00001/d.World.dat -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/react_data/seed_00001 copying build/lib/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/react_data/seed_00001/c.World.dat -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/react_data/seed_00001 copying build/lib/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/react_data/seed_00001/b.World.dat -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/react_data/seed_00001 copying build/lib/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/react_data/seed_00001/a.World.dat -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/react_data/seed_00001 creating build/bdist.linux-x86_64/wheel/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/viz_data creating build/bdist.linux-x86_64/wheel/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/viz_data/seed_00001 copying build/lib/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/viz_data/seed_00001/Scene.cellbin.2.dat -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/viz_data/seed_00001 copying build/lib/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/viz_data/seed_00001/Scene.cellbin.1.dat -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/viz_data/seed_00001 copying build/lib/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/viz_data/seed_00001/Scene.cellbin.0.dat -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/viz_data/seed_00001 copying build/lib/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/Scene.viz_output.mdl -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data copying build/lib/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/Scene.surface_classes.mdl -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data copying build/lib/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/Scene.rxn_output.mdl -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data copying build/lib/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/Scene.release_patterns.mdl -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data copying build/lib/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/Scene.reactions.mdl -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data copying build/lib/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/Scene.parameters.mdl -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data copying build/lib/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/Scene.molecules.mdl -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data copying build/lib/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/Scene.mod_surf_regions.mdl -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data copying build/lib/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/Scene.main.mdl -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data copying build/lib/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/Scene.instantiation.mdl -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data copying build/lib/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/Scene.initialization.mdl -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data copying build/lib/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/Scene.geometry.mdl -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data copying build/lib/simulariumio/tests/data/mcell/organelle_model_example_files/mcell/data_layout.json -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/mcell/organelle_model_example_files/mcell copying build/lib/simulariumio/tests/data/mcell/organelle_model_example_files/start_time.txt -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/mcell/organelle_model_example_files creating build/bdist.linux-x86_64/wheel/simulariumio/tests/data/mcell/organelle_model_viz_output copying build/lib/simulariumio/tests/data/mcell/organelle_model_viz_output/Scene.data_model.00.json -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/mcell/organelle_model_viz_output copying build/lib/simulariumio/tests/data/mcell/organelle_model_viz_output/Scene.cellbin.2.dat -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/mcell/organelle_model_viz_output copying build/lib/simulariumio/tests/data/mcell/organelle_model_viz_output/Scene.cellbin.1.dat -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/mcell/organelle_model_viz_output copying build/lib/simulariumio/tests/data/mcell/organelle_model_viz_output/Scene.cellbin.0.dat -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/mcell/organelle_model_viz_output copying build/lib/simulariumio/tests/data/mcell/organelle_model_example.blend -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/mcell creating build/bdist.linux-x86_64/wheel/simulariumio/tests/data/md copying build/lib/simulariumio/tests/data/md/example.xyz -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/md creating build/bdist.linux-x86_64/wheel/simulariumio/tests/data/medyan copying build/lib/simulariumio/tests/data/medyan/test.traj -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/medyan copying build/lib/simulariumio/tests/data/medyan/snapshot.traj -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/medyan creating build/bdist.linux-x86_64/wheel/simulariumio/tests/data/readdy copying build/lib/simulariumio/tests/data/readdy/test.h5 -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/readdy creating build/bdist.linux-x86_64/wheel/simulariumio/tests/data/smoldyn copying build/lib/simulariumio/tests/data/smoldyn/example_data.txt -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/smoldyn copying build/lib/simulariumio/tests/data/smoldyn/example_3D.txt -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/smoldyn copying build/lib/simulariumio/tests/data/smoldyn/example_2D.txt -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/smoldyn creating build/bdist.linux-x86_64/wheel/simulariumio/tests/data/springsalad copying build/lib/simulariumio/tests/data/springsalad/test.txt -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/springsalad copying build/lib/simulariumio/tests/data/springsalad/Simulation0_SIM_VIEW_Run0.txt -> build/bdist.linux-x86_64/wheel/simulariumio/tests/data/springsalad creating build/bdist.linux-x86_64/wheel/simulariumio/tests/buffer copying build/lib/simulariumio/tests/buffer/test_buffer_contents.py -> build/bdist.linux-x86_64/wheel/simulariumio/tests/buffer copying build/lib/simulariumio/tests/buffer/test_buffer_size.py -> build/bdist.linux-x86_64/wheel/simulariumio/tests/buffer creating build/bdist.linux-x86_64/wheel/simulariumio/tests/converters copying build/lib/simulariumio/tests/converters/test_cellpack_converter.py -> build/bdist.linux-x86_64/wheel/simulariumio/tests/converters copying build/lib/simulariumio/tests/converters/test_cytosim_converter.py -> build/bdist.linux-x86_64/wheel/simulariumio/tests/converters copying build/lib/simulariumio/tests/converters/test_mcell_converter.py -> build/bdist.linux-x86_64/wheel/simulariumio/tests/converters copying build/lib/simulariumio/tests/converters/test_md_converter.py -> build/bdist.linux-x86_64/wheel/simulariumio/tests/converters copying build/lib/simulariumio/tests/converters/test_medyan_converter.py -> build/bdist.linux-x86_64/wheel/simulariumio/tests/converters copying build/lib/simulariumio/tests/converters/test_physicell_converter.py -> build/bdist.linux-x86_64/wheel/simulariumio/tests/converters copying build/lib/simulariumio/tests/converters/test_readdy_converter.py -> build/bdist.linux-x86_64/wheel/simulariumio/tests/converters copying build/lib/simulariumio/tests/converters/test_smoldyn_converter.py -> build/bdist.linux-x86_64/wheel/simulariumio/tests/converters copying build/lib/simulariumio/tests/converters/test_springsalad_converter.py -> build/bdist.linux-x86_64/wheel/simulariumio/tests/converters copying build/lib/simulariumio/tests/converters/test_trajectory_converter.py -> build/bdist.linux-x86_64/wheel/simulariumio/tests/converters creating build/bdist.linux-x86_64/wheel/simulariumio/tests/filters copying build/lib/simulariumio/tests/filters/test_add_agents_filter.py -> build/bdist.linux-x86_64/wheel/simulariumio/tests/filters copying build/lib/simulariumio/tests/filters/test_every_nth_agent_filter.py -> build/bdist.linux-x86_64/wheel/simulariumio/tests/filters copying build/lib/simulariumio/tests/filters/test_every_nth_subpoint_filter.py -> build/bdist.linux-x86_64/wheel/simulariumio/tests/filters copying build/lib/simulariumio/tests/filters/test_every_nth_timestep_filter.py -> build/bdist.linux-x86_64/wheel/simulariumio/tests/filters copying build/lib/simulariumio/tests/filters/test_multiply_space_filter.py -> build/bdist.linux-x86_64/wheel/simulariumio/tests/filters copying build/lib/simulariumio/tests/filters/test_multiply_time_filter.py -> build/bdist.linux-x86_64/wheel/simulariumio/tests/filters copying build/lib/simulariumio/tests/filters/test_transform_spatial_axes_filter.py -> build/bdist.linux-x86_64/wheel/simulariumio/tests/filters copying build/lib/simulariumio/tests/filters/test_translate_filter.py -> build/bdist.linux-x86_64/wheel/simulariumio/tests/filters copying build/lib/simulariumio/tests/filters/test_translate_filter_sphere_groups.py -> build/bdist.linux-x86_64/wheel/simulariumio/tests/filters creating build/bdist.linux-x86_64/wheel/simulariumio/tests/plot_readers copying build/lib/simulariumio/tests/plot_readers/test_histogram_plot_reader.py -> build/bdist.linux-x86_64/wheel/simulariumio/tests/plot_readers copying build/lib/simulariumio/tests/plot_readers/test_scatter_plot_reader.py -> build/bdist.linux-x86_64/wheel/simulariumio/tests/plot_readers creating build/bdist.linux-x86_64/wheel/simulariumio/tests/readers copying build/lib/simulariumio/tests/readers/test_binary_reader.py -> build/bdist.linux-x86_64/wheel/simulariumio/tests/readers creating build/bdist.linux-x86_64/wheel/simulariumio/tests/writers copying build/lib/simulariumio/tests/writers/test_binary_writer.py -> build/bdist.linux-x86_64/wheel/simulariumio/tests/writers copying build/lib/simulariumio/tests/__init__.py -> build/bdist.linux-x86_64/wheel/simulariumio/tests copying build/lib/simulariumio/tests/conftest.py -> build/bdist.linux-x86_64/wheel/simulariumio/tests copying build/lib/simulariumio/tests/test_agents_from_lists.py -> build/bdist.linux-x86_64/wheel/simulariumio/tests copying build/lib/simulariumio/tests/test_from_dict.py -> build/bdist.linux-x86_64/wheel/simulariumio/tests copying build/lib/simulariumio/tests/test_input_file_data.py -> build/bdist.linux-x86_64/wheel/simulariumio/tests creating build/bdist.linux-x86_64/wheel/simulariumio/writers copying build/lib/simulariumio/writers/__init__.py -> build/bdist.linux-x86_64/wheel/simulariumio/writers copying build/lib/simulariumio/writers/binary_chunk.py -> build/bdist.linux-x86_64/wheel/simulariumio/writers copying build/lib/simulariumio/writers/binary_values.py -> build/bdist.linux-x86_64/wheel/simulariumio/writers copying build/lib/simulariumio/writers/binary_writer.py -> build/bdist.linux-x86_64/wheel/simulariumio/writers copying build/lib/simulariumio/writers/json_writer.py -> build/bdist.linux-x86_64/wheel/simulariumio/writers copying build/lib/simulariumio/writers/writer.py -> build/bdist.linux-x86_64/wheel/simulariumio/writers copying build/lib/simulariumio/__init__.py -> build/bdist.linux-x86_64/wheel/simulariumio copying build/lib/simulariumio/constants.py -> build/bdist.linux-x86_64/wheel/simulariumio copying build/lib/simulariumio/exceptions.py -> build/bdist.linux-x86_64/wheel/simulariumio copying build/lib/simulariumio/file_converter.py -> build/bdist.linux-x86_64/wheel/simulariumio copying build/lib/simulariumio/trajectory_converter.py -> build/bdist.linux-x86_64/wheel/simulariumio copying build/lib/simulariumio/utils.py -> build/bdist.linux-x86_64/wheel/simulariumio running install_egg_info Copying simulariumio.egg-info to build/bdist.linux-x86_64/wheel/simulariumio-1.8.0-py3.11.egg-info running install_scripts creating build/bdist.linux-x86_64/wheel/simulariumio-1.8.0.dist-info/WHEEL creating '/builddir/build/BUILD/simulariumio-1.8.0/.pyproject-builddir/pip-wheel-m2bkmd14/.tmp-guro0i95/simulariumio-1.8.0-py3-none-any.whl' and adding 'build/bdist.linux-x86_64/wheel' to it adding 'benchmarks/README.md' adding 'benchmarks/TEST_RESOURCES_HASH.txt' adding 'benchmarks/benchmark_simulariumio.py' adding 'benchmarks/download_benchmark_resources.py' adding 'benchmarks/upload_benchmark_resources.py' adding 'docs/conf.py' adding 'docs/contributing.rst' adding 'docs/index.rst' adding 'docs/installation.rst' adding 'docs/modules.rst' adding 'examples/Tutorial_cellpack.ipynb' adding 'examples/Tutorial_custom.ipynb' adding 'examples/Tutorial_cytosim.ipynb' adding 'examples/Tutorial_filters.ipynb' adding 'examples/Tutorial_mcell.ipynb' adding 'examples/Tutorial_md.ipynb' adding 'examples/Tutorial_medyan.ipynb' adding 'examples/Tutorial_physicell.ipynb' adding 'examples/Tutorial_plots.ipynb' adding 'examples/Tutorial_readdy.ipynb' adding 'examples/Tutorial_smoldyn.ipynb' adding 'examples/Tutorial_springsalad.ipynb' adding 'examples/__init__.py' adding 'examples/img/drag_drop.gif' adding 'simulariumio/__init__.py' adding 'simulariumio/constants.py' adding 'simulariumio/exceptions.py' adding 'simulariumio/file_converter.py' adding 'simulariumio/trajectory_converter.py' adding 'simulariumio/utils.py' adding 'simulariumio/cellpack/__init__.py' adding 'simulariumio/cellpack/cellpack_converter.py' adding 'simulariumio/cellpack/cellpack_data.py' adding 'simulariumio/cytosim/__init__.py' adding 'simulariumio/cytosim/cytosim_converter.py' adding 'simulariumio/cytosim/cytosim_data.py' adding 'simulariumio/cytosim/cytosim_object_info.py' adding 'simulariumio/data_objects/__init__.py' adding 'simulariumio/data_objects/agent_data.py' adding 'simulariumio/data_objects/camera_data.py' adding 'simulariumio/data_objects/dimension_data.py' adding 'simulariumio/data_objects/display_data.py' adding 'simulariumio/data_objects/histogram_plot_data.py' adding 'simulariumio/data_objects/input_file_data.py' adding 'simulariumio/data_objects/meta_data.py' adding 'simulariumio/data_objects/model_meta_data.py' adding 'simulariumio/data_objects/scatter_plot_data.py' adding 'simulariumio/data_objects/trajectory_data.py' adding 'simulariumio/data_objects/unit_data.py' adding 'simulariumio/filters/__init__.py' adding 'simulariumio/filters/add_agents_filter.py' adding 'simulariumio/filters/every_nth_agent_filter.py' adding 'simulariumio/filters/every_nth_subpoint_filter.py' adding 'simulariumio/filters/every_nth_timestep_filter.py' adding 'simulariumio/filters/filter.py' adding 'simulariumio/filters/multiply_space_filter.py' adding 'simulariumio/filters/multiply_time_filter.py' adding 'simulariumio/filters/transform_spatial_axes_filter.py' adding 'simulariumio/filters/translate_filter.py' adding 'simulariumio/mcell/__init__.py' adding 'simulariumio/mcell/mcell_converter.py' adding 'simulariumio/mcell/mcell_data.py' adding 'simulariumio/md/__init__.py' adding 'simulariumio/md/md_converter.py' adding 'simulariumio/md/md_data.py' adding 'simulariumio/medyan/__init__.py' adding 'simulariumio/medyan/medyan_converter.py' adding 'simulariumio/medyan/medyan_data.py' adding 'simulariumio/package_data/jmolcolors.csv' adding 'simulariumio/physicell/__init__.py' adding 'simulariumio/physicell/physicell_converter.py' adding 'simulariumio/physicell/physicell_data.py' adding 'simulariumio/physicell/dep/__init__.py' adding 'simulariumio/physicell/dep/pyMCDS.py' adding 'simulariumio/plot_readers/__init__.py' adding 'simulariumio/plot_readers/histogram_plot_reader.py' adding 'simulariumio/plot_readers/plot_reader.py' adding 'simulariumio/plot_readers/scatter_plot_reader.py' adding 'simulariumio/readdy/__init__.py' adding 'simulariumio/readdy/readdy_converter.py' adding 'simulariumio/readdy/readdy_data.py' adding 'simulariumio/readers/__init__.py' adding 'simulariumio/readers/binary_info.py' adding 'simulariumio/readers/simularium_binary_reader.py' adding 'simulariumio/smoldyn/__init__.py' adding 'simulariumio/smoldyn/smoldyn_converter.py' adding 'simulariumio/smoldyn/smoldyn_data.py' adding 'simulariumio/springsalad/__init__.py' adding 'simulariumio/springsalad/springsalad_converter.py' adding 'simulariumio/springsalad/springsalad_data.py' adding 'simulariumio/tests/__init__.py' adding 'simulariumio/tests/conftest.py' adding 'simulariumio/tests/test_agents_from_lists.py' adding 'simulariumio/tests/test_from_dict.py' adding 'simulariumio/tests/test_input_file_data.py' adding 'simulariumio/tests/buffer/test_buffer_contents.py' adding 'simulariumio/tests/buffer/test_buffer_size.py' adding 'simulariumio/tests/converters/test_cellpack_converter.py' adding 'simulariumio/tests/converters/test_cytosim_converter.py' adding 'simulariumio/tests/converters/test_mcell_converter.py' adding 'simulariumio/tests/converters/test_md_converter.py' adding 'simulariumio/tests/converters/test_medyan_converter.py' adding 'simulariumio/tests/converters/test_physicell_converter.py' adding 'simulariumio/tests/converters/test_readdy_converter.py' adding 'simulariumio/tests/converters/test_smoldyn_converter.py' adding 'simulariumio/tests/converters/test_springsalad_converter.py' adding 'simulariumio/tests/converters/test_trajectory_converter.py' adding 'simulariumio/tests/data/binary/50filaments_motor_linker_binary.binary' adding 'simulariumio/tests/data/binary/binary_test.binary' adding 'simulariumio/tests/data/cellpack/example_2D_recipe.json' adding 'simulariumio/tests/data/cellpack/example_2D_results.json' adding 'simulariumio/tests/data/cellpack/mock_recipe.json' adding 'simulariumio/tests/data/cellpack/mock_results.json' adding 'simulariumio/tests/data/cellpack/two_ingredients_recipe.json' adding 'simulariumio/tests/data/cellpack/two_ingredients_results.json' adding 'simulariumio/tests/data/cytosim/3_fibers_3_frames/fiber_points.txt' adding 'simulariumio/tests/data/cytosim/3_fibers_3_frames/test.txt' adding 'simulariumio/tests/data/cytosim/aster_pull3D_couples_actin_solid/aster_pull3D_couple_actin_solid.cym' adding 'simulariumio/tests/data/cytosim/aster_pull3D_couples_actin_solid/couples.txt' adding 'simulariumio/tests/data/cytosim/aster_pull3D_couples_actin_solid/fiber_points.txt' adding 'simulariumio/tests/data/cytosim/aster_pull3D_couples_actin_solid/singles.txt' adding 'simulariumio/tests/data/cytosim/aster_pull3D_couples_actin_solid/solids.txt' adding 'simulariumio/tests/data/cytosim/aster_pull3D_couples_actin_solid_3_frames/aster_pull3D_couple_actin_solid.cym' adding 'simulariumio/tests/data/cytosim/aster_pull3D_couples_actin_solid_3_frames/aster_pull3D_couples_actin_solid_3_frames.json' adding 'simulariumio/tests/data/cytosim/aster_pull3D_couples_actin_solid_3_frames/aster_pull3D_couples_actin_solid_3_frames_small.json' adding 'simulariumio/tests/data/cytosim/aster_pull3D_couples_actin_solid_3_frames/couples.txt' adding 'simulariumio/tests/data/cytosim/aster_pull3D_couples_actin_solid_3_frames/fiber_points.txt' adding 'simulariumio/tests/data/cytosim/aster_pull3D_couples_actin_solid_3_frames/singles.txt' adding 'simulariumio/tests/data/cytosim/aster_pull3D_couples_actin_solid_3_frames/solids.txt' adding 'simulariumio/tests/data/cytosim/fiber_test/fiber_points.txt' adding 'simulariumio/tests/data/malformed_data/malformed_cytosim.txt' adding 'simulariumio/tests/data/malformed_data/malformed_medyan.traj' adding 'simulariumio/tests/data/malformed_data/malformed_smoldyn.txt' adding 'simulariumio/tests/data/malformed_data/springsalad_broken_link.txt' adding 'simulariumio/tests/data/mcell/organelle_model_example.blend' adding 'simulariumio/tests/data/mcell/organelle_model_example_files/start_time.txt' adding 'simulariumio/tests/data/mcell/organelle_model_example_files/mcell/data_layout.json' adding 'simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/Scene.geometry.mdl' adding 'simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/Scene.initialization.mdl' adding 'simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/Scene.instantiation.mdl' adding 'simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/Scene.main.mdl' adding 'simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/Scene.mod_surf_regions.mdl' adding 'simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/Scene.molecules.mdl' adding 'simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/Scene.parameters.mdl' adding 'simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/Scene.reactions.mdl' adding 'simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/Scene.release_patterns.mdl' adding 'simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/Scene.rxn_output.mdl' adding 'simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/Scene.surface_classes.mdl' adding 'simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/Scene.viz_output.mdl' adding 'simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/react_data/seed_00001/a.World.dat' adding 'simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/react_data/seed_00001/b.World.dat' adding 'simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/react_data/seed_00001/c.World.dat' adding 'simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/react_data/seed_00001/d.World.dat' adding 'simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/viz_data/seed_00001/Scene.cellbin.0.dat' adding 'simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/viz_data/seed_00001/Scene.cellbin.1.dat' adding 'simulariumio/tests/data/mcell/organelle_model_example_files/mcell/output_data/viz_data/seed_00001/Scene.cellbin.2.dat' adding 'simulariumio/tests/data/mcell/organelle_model_viz_output/Scene.cellbin.0.dat' adding 'simulariumio/tests/data/mcell/organelle_model_viz_output/Scene.cellbin.1.dat' adding 'simulariumio/tests/data/mcell/organelle_model_viz_output/Scene.cellbin.2.dat' adding 'simulariumio/tests/data/mcell/organelle_model_viz_output/Scene.data_model.00.json' adding 'simulariumio/tests/data/md/example.xyz' adding 'simulariumio/tests/data/medyan/snapshot.traj' adding 'simulariumio/tests/data/medyan/test.traj' adding 'simulariumio/tests/data/physicell/default_output/initial.xml' adding 'simulariumio/tests/data/physicell/default_output/initial_cells.mat' adding 'simulariumio/tests/data/physicell/default_output/initial_cells_physicell.mat' adding 'simulariumio/tests/data/physicell/default_output/initial_mesh0.mat' adding 'simulariumio/tests/data/physicell/default_output/initial_microenvironment0.mat' adding 'simulariumio/tests/data/physicell/default_output/output00000000.xml' adding 'simulariumio/tests/data/physicell/default_output/output00000000_cells.mat' adding 'simulariumio/tests/data/physicell/default_output/output00000000_cells_physicell.mat' adding 'simulariumio/tests/data/physicell/default_output/output00000000_microenvironment0.mat' adding 'simulariumio/tests/data/physicell/default_output/output00000001.xml' adding 'simulariumio/tests/data/physicell/default_output/output00000001_cells.mat' adding 'simulariumio/tests/data/physicell/default_output/output00000001_cells_physicell.mat' adding 'simulariumio/tests/data/physicell/default_output/output00000001_microenvironment0.mat' adding 'simulariumio/tests/data/physicell/default_output/output00000002.xml' adding 'simulariumio/tests/data/physicell/default_output/output00000002_cells.mat' adding 'simulariumio/tests/data/physicell/default_output/output00000002_cells_physicell.mat' adding 'simulariumio/tests/data/physicell/default_output/output00000002_microenvironment0.mat' adding 'simulariumio/tests/data/physicell/subcell_output/initial.xml' adding 'simulariumio/tests/data/physicell/subcell_output/initial_cells.mat' adding 'simulariumio/tests/data/physicell/subcell_output/initial_cells_physicell.mat' adding 'simulariumio/tests/data/physicell/subcell_output/initial_mesh0.mat' adding 'simulariumio/tests/data/physicell/subcell_output/initial_microenvironment0.mat' adding 'simulariumio/tests/data/physicell/subcell_output/output00000000.xml' adding 'simulariumio/tests/data/physicell/subcell_output/output00000000_cells.mat' adding 'simulariumio/tests/data/physicell/subcell_output/output00000000_cells_physicell.mat' adding 'simulariumio/tests/data/physicell/subcell_output/output00000000_microenvironment0.mat' adding 'simulariumio/tests/data/physicell/subcell_output/output00000001.xml' adding 'simulariumio/tests/data/physicell/subcell_output/output00000001_cells.mat' adding 'simulariumio/tests/data/physicell/subcell_output/output00000001_cells_physicell.mat' adding 'simulariumio/tests/data/physicell/subcell_output/output00000001_microenvironment0.mat' adding 'simulariumio/tests/data/physicell/subcell_output/output00000002.xml' adding 'simulariumio/tests/data/physicell/subcell_output/output00000002_cells.mat' adding 'simulariumio/tests/data/physicell/subcell_output/output00000002_cells_physicell.mat' adding 'simulariumio/tests/data/physicell/subcell_output/output00000002_microenvironment0.mat' adding 'simulariumio/tests/data/readdy/test.h5' adding 'simulariumio/tests/data/smoldyn/example_2D.txt' adding 'simulariumio/tests/data/smoldyn/example_3D.txt' adding 'simulariumio/tests/data/smoldyn/example_data.txt' adding 'simulariumio/tests/data/springsalad/Simulation0_SIM_VIEW_Run0.txt' adding 'simulariumio/tests/data/springsalad/test.txt' adding 'simulariumio/tests/filters/test_add_agents_filter.py' adding 'simulariumio/tests/filters/test_every_nth_agent_filter.py' adding 'simulariumio/tests/filters/test_every_nth_subpoint_filter.py' adding 'simulariumio/tests/filters/test_every_nth_timestep_filter.py' adding 'simulariumio/tests/filters/test_multiply_space_filter.py' adding 'simulariumio/tests/filters/test_multiply_time_filter.py' adding 'simulariumio/tests/filters/test_transform_spatial_axes_filter.py' adding 'simulariumio/tests/filters/test_translate_filter.py' adding 'simulariumio/tests/filters/test_translate_filter_sphere_groups.py' adding 'simulariumio/tests/plot_readers/test_histogram_plot_reader.py' adding 'simulariumio/tests/plot_readers/test_scatter_plot_reader.py' adding 'simulariumio/tests/readers/test_binary_reader.py' adding 'simulariumio/tests/writers/test_binary_writer.py' adding 'simulariumio/writers/__init__.py' adding 'simulariumio/writers/binary_chunk.py' adding 'simulariumio/writers/binary_values.py' adding 'simulariumio/writers/binary_writer.py' adding 'simulariumio/writers/json_writer.py' adding 'simulariumio/writers/writer.py' adding 'ui-templates/README.md' adding 'ui-templates/base_types.json' adding 'ui-templates/cellpack_data.json' adding 'ui-templates/cytosim_data.json' adding 'ui-templates/medyan_data.json' adding 'ui-templates/smoldyn_data.json' adding 'ui-templates/springsalad_data.json' adding 'ui-templates/custom-types/camera_data.json' adding 'ui-templates/custom-types/coordinates_xyz.json' adding 'ui-templates/custom-types/cytosim_object_info.json' adding 'ui-templates/custom-types/display_data.json' adding 'ui-templates/custom-types/meta_data.json' adding 'ui-templates/custom-types/model_meta_data.json' adding 'ui-templates/custom-types/space_unit_data.json' adding 'ui-templates/custom-types/time_unit_data.json' adding 'simulariumio-1.8.0.dist-info/LICENSE' adding 'simulariumio-1.8.0.dist-info/METADATA' adding 'simulariumio-1.8.0.dist-info/WHEEL' adding 'simulariumio-1.8.0.dist-info/top_level.txt' adding 'simulariumio-1.8.0.dist-info/RECORD' removing build/bdist.linux-x86_64/wheel Building wheel for simulariumio (pyproject.toml): finished with status 'done' Created wheel for simulariumio: filename=simulariumio-1.8.0-py3-none-any.whl size=7049444 sha256=318606e4101704d8b58263a340463a12bc2c54cc800083dc484d8f502c24c0c6 Stored in directory: /builddir/.cache/pip/wheels/16/3d/9f/f23e85705bc7c11b0ec8ebee6d5f9d4536d71b9ec4d60afbda Successfully built simulariumio + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.BWkEWF + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/python-simulariumio-1.8.0-1.fc39.x86_64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/python-simulariumio-1.8.0-1.fc39.x86_64 ++ dirname /builddir/build/BUILDROOT/python-simulariumio-1.8.0-1.fc39.x86_64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/python-simulariumio-1.8.0-1.fc39.x86_64 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd simulariumio-1.8.0 ++ ls /builddir/build/BUILD/simulariumio-1.8.0/pyproject-wheeldir/simulariumio-1.8.0-py3-none-any.whl ++ sed -E 's/([^-]+)-([^-]+)-.+\.whl/\1==\2/' ++ xargs basename --multiple + specifier=simulariumio==1.8.0 + TMPDIR=/builddir/build/BUILD/simulariumio-1.8.0/.pyproject-builddir + /usr/bin/python3 -m pip install --root /builddir/build/BUILDROOT/python-simulariumio-1.8.0-1.fc39.x86_64 --prefix /usr --no-deps --disable-pip-version-check --progress-bar off --verbose --ignore-installed --no-warn-script-location --no-index --no-cache-dir --find-links /builddir/build/BUILD/simulariumio-1.8.0/pyproject-wheeldir simulariumio==1.8.0 Using pip 23.0.1 from /usr/lib/python3.11/site-packages/pip (python 3.11) Looking in links: /builddir/build/BUILD/simulariumio-1.8.0/pyproject-wheeldir Processing ./pyproject-wheeldir/simulariumio-1.8.0-py3-none-any.whl Installing collected packages: simulariumio Successfully installed simulariumio-1.8.0 + '[' -d /builddir/build/BUILDROOT/python-simulariumio-1.8.0-1.fc39.x86_64/usr/bin ']' + rm -f /builddir/build/BUILD/python-simulariumio-1.8.0-1.fc39.x86_64-pyproject-ghost-distinfo + site_dirs=() + '[' -d /builddir/build/BUILDROOT/python-simulariumio-1.8.0-1.fc39.x86_64/usr/lib/python3.11/site-packages ']' + site_dirs+=("/usr/lib/python3.11/site-packages") + '[' /builddir/build/BUILDROOT/python-simulariumio-1.8.0-1.fc39.x86_64/usr/lib64/python3.11/site-packages '!=' /builddir/build/BUILDROOT/python-simulariumio-1.8.0-1.fc39.x86_64/usr/lib/python3.11/site-packages ']' + '[' -d /builddir/build/BUILDROOT/python-simulariumio-1.8.0-1.fc39.x86_64/usr/lib64/python3.11/site-packages ']' + for site_dir in ${site_dirs[@]} + for distinfo in /builddir/build/BUILDROOT/python-simulariumio-1.8.0-1.fc39.x86_64$site_dir/*.dist-info + echo '%ghost /usr/lib/python3.11/site-packages/simulariumio-1.8.0.dist-info' + sed -i s/pip/rpm/ /builddir/build/BUILDROOT/python-simulariumio-1.8.0-1.fc39.x86_64/usr/lib/python3.11/site-packages/simulariumio-1.8.0.dist-info/INSTALLER + PYTHONPATH=/usr/lib/rpm/redhat + /usr/bin/python3 -B /usr/lib/rpm/redhat/pyproject_preprocess_record.py --buildroot /builddir/build/BUILDROOT/python-simulariumio-1.8.0-1.fc39.x86_64 --record /builddir/build/BUILDROOT/python-simulariumio-1.8.0-1.fc39.x86_64/usr/lib/python3.11/site-packages/simulariumio-1.8.0.dist-info/RECORD --output /builddir/build/BUILD/python-simulariumio-1.8.0-1.fc39.x86_64-pyproject-record + rm -fv /builddir/build/BUILDROOT/python-simulariumio-1.8.0-1.fc39.x86_64/usr/lib/python3.11/site-packages/simulariumio-1.8.0.dist-info/RECORD removed '/builddir/build/BUILDROOT/python-simulariumio-1.8.0-1.fc39.x86_64/usr/lib/python3.11/site-packages/simulariumio-1.8.0.dist-info/RECORD' + rm -fv /builddir/build/BUILDROOT/python-simulariumio-1.8.0-1.fc39.x86_64/usr/lib/python3.11/site-packages/simulariumio-1.8.0.dist-info/REQUESTED removed '/builddir/build/BUILDROOT/python-simulariumio-1.8.0-1.fc39.x86_64/usr/lib/python3.11/site-packages/simulariumio-1.8.0.dist-info/REQUESTED' ++ wc -l /builddir/build/BUILD/python-simulariumio-1.8.0-1.fc39.x86_64-pyproject-ghost-distinfo ++ cut -f1 '-d ' + lines=1 + '[' 1 -ne 1 ']' + /usr/bin/python3 /usr/lib/rpm/redhat/pyproject_save_files.py --output-files /builddir/build/BUILD/python-simulariumio-1.8.0-1.fc39.x86_64-pyproject-files --output-modules /builddir/build/BUILD/python-simulariumio-1.8.0-1.fc39.x86_64-pyproject-modules --buildroot /builddir/build/BUILDROOT/python-simulariumio-1.8.0-1.fc39.x86_64 --sitelib /usr/lib/python3.11/site-packages --sitearch /usr/lib64/python3.11/site-packages --python-version 3.11 --pyproject-record /builddir/build/BUILD/python-simulariumio-1.8.0-1.fc39.x86_64-pyproject-record --prefix /usr '*' +auto + /usr/bin/find-debuginfo -j2 --strict-build-id -m -i --build-id-seed 1.8.0-1.fc39 --unique-debug-suffix -1.8.0-1.fc39.x86_64 --unique-debug-src-base python-simulariumio-1.8.0-1.fc39.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/simulariumio-1.8.0 find: 'debug': No such file or directory + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j2 Bytecompiling .py files below /builddir/build/BUILDROOT/python-simulariumio-1.8.0-1.fc39.x86_64/usr/lib/python3.11 using python3.11 + /usr/lib/rpm/redhat/brp-python-hardlink Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.5Ss5hO + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd simulariumio-1.8.0 + '[' '!' -f /builddir/build/BUILD/python-simulariumio-1.8.0-1.fc39.x86_64-pyproject-modules ']' + PATH=/builddir/build/BUILDROOT/python-simulariumio-1.8.0-1.fc39.x86_64/usr/bin:/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin + PYTHONPATH=/builddir/build/BUILDROOT/python-simulariumio-1.8.0-1.fc39.x86_64/usr/lib64/python3.11/site-packages:/builddir/build/BUILDROOT/python-simulariumio-1.8.0-1.fc39.x86_64/usr/lib/python3.11/site-packages + _PYTHONSITE=/builddir/build/BUILDROOT/python-simulariumio-1.8.0-1.fc39.x86_64/usr/lib64/python3.11/site-packages:/builddir/build/BUILDROOT/python-simulariumio-1.8.0-1.fc39.x86_64/usr/lib/python3.11/site-packages + PYTHONDONTWRITEBYTECODE=1 + /usr/bin/python3 -sP /usr/lib/rpm/redhat/import_all_modules.py -f /builddir/build/BUILD/python-simulariumio-1.8.0-1.fc39.x86_64-pyproject-modules -t Check import: benchmarks Check import: docs Check import: examples Check import: simulariumio + RPM_EC=0 ++ jobs -p + exit 0 Processing files: python3-simulariumio-1.8.0-1.fc39.noarch Provides: python-simulariumio = 1.8.0-1.fc39 python3-simulariumio = 1.8.0-1.fc39 python3.11-simulariumio = 1.8.0-1.fc39 python3.11dist(simulariumio) = 1.8 python3dist(simulariumio) = 1.8 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: python(abi) = 3.11 python3.11dist(numpy) >= 1.19 python3.11dist(pandas) >= 1.1.2 python3.11dist(pint) >= 0.17 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/python-simulariumio-1.8.0-1.fc39.x86_64 Wrote: /builddir/build/SRPMS/python-simulariumio-1.8.0-1.fc39.src.rpm Wrote: /builddir/build/RPMS/python3-simulariumio-1.8.0-1.fc39.noarch.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.sCI0gx + umask 022 + cd /builddir/build/BUILD + cd simulariumio-1.8.0 + /usr/bin/rm -rf /builddir/build/BUILDROOT/python-simulariumio-1.8.0-1.fc39.x86_64 + RPM_EC=0 ++ jobs -p + exit 0 Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.ysedfK + umask 022 + cd /builddir/build/BUILD + rm -rf simulariumio-1.8.0 simulariumio-1.8.0.gemspec + RPM_EC=0 ++ jobs -p + exit 0 Child return code was: 0