module CagnutGatk::CheckTools
Public Instance Methods
check_gatk(path)
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# File lib/cagnut_gatk/check_tools.rb, line 8 def check_gatk path check_tool_ver 'GATK' do `#{@java} -jar #{path} --version` if path end end
check_tool(tools_path, refs=nil)
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Calls superclass method
# File lib/cagnut_gatk/check_tools.rb, line 3 def check_tool tools_path, refs=nil super if defined?(super) check_gatk tools_path['gatk'] if @java end