module CagnutPipelineDraw::Configuration::Utils

Public Class Methods

create_output_dirs(config, index, dir) click to toggle source
# File lib/cagnut_pipeline_draw/configuration.rb, line 6
def create_output_dirs config, index, dir
  draw_pipeline_folders.each do |folder_name|
    FileUtils.mkdir_p "#{dir}/#{folder_name}"
    config['samples'][index]["#{folder_name}"] = "#{dir}/#{folder_name}"
  end
end
draw_pipeline_folders() click to toggle source
# File lib/cagnut_pipeline_draw/configuration.rb, line 13
def draw_pipeline_folders
  %W(
    bam
    csv
    fastq
    qseq
    stat
    sai
    sam
    tmp
    vcf
  )
end