class BELParser::Language::Semantics::SemanticsInvalidProteinModificationWarning
Public Class Methods
new(expression_node, spec, expected_protein_modifications)
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Calls superclass method
# File lib/bel_parser/language/semantics_ast_warnings.rb, line 134 def initialize(expression_node, spec, expected_protein_modifications) super(expression_node, spec) @expected_protein_modifications = expected_protein_modifications end
Public Instance Methods
to_s()
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# File lib/bel_parser/language/semantics_ast_warnings.rb, line 139 def to_s pmod = @expression_node.children[0].string_literal %(Protein modification of "#{pmod}" does not match allowed protein modifications: #{@expected_protein_modifications.join(', ')}) end