class BELParser::Language::Version1_0::Upgrades::ActivityTransformation
Public Instance Methods
add_molecular_activity(_activity_identifier)
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# File lib/bel_parser/language/version1_0/upgrades/activity_transformation.rb, line 28 def add_molecular_activity(_activity_identifier) argument( term( function( identifier('molecularActivity')), argument( parameter( prefix( identifier('default')), value( identifier(_activity_identifier)))))) end
on_function(function_node)
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# File lib/bel_parser/language/version1_0/upgrades/activity_transformation.rb, line 41 def on_function(function_node) function_node.updated([identifier('activity')]) end
on_term(term_node)
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# File lib/bel_parser/language/version1_0/upgrades/activity_transformation.rb, line 14 def on_term(term_node) if ACTIVITIES.keys.include?(term_node.function.identifier.string_literal) term_node.updated([ # activity function process(term_node.function), # original arguments term_node.arguments.map! {|arg| argument(process(arg.child))}, # additional molecularActivity argument add_molecular_activity(ACTIVITIES[term_node.function.identifier.string_literal]) ].flatten) end end