class GffGo

Public Instance Methods

report(go,parent,seqid) click to toggle source
# File lib/gene_assembler/gff_go.rb, line 2
def report(go,parent,seqid)
        if go.source.nil?
                go.source='Unknown'
        end
        obsolete=nil
        if go.obsolete
                obsolete="Obsolete=True"
        end
        go_text="#{seqid}\t#{go.source}\tOntology\t#{go.beg}\t#{go.end}\t.\t+\t.\tID=#{parent}_#{go.name}#{go.code};Parent=#{parent};Name=#{go.name}_#{go.code};Note=#{go.name}_#{go.code};#{obsolete}"
        return go_text
end