class ActionLowHighSize
Author: Almudena Bocinos Rioboo
Defines the main methods that are necessary to execute PluginActionLowHighSize
Inherit: Plugin
Public Class Methods
new(start_pos,end_pos)
click to toggle source
Calls superclass method
SeqtrimAction::new
# File lib/seqtrimnext/actions/action_low_high_size.rb, line 12 def initialize(start_pos,end_pos) super(start_pos,end_pos) @cut =false end
Public Instance Methods
apply_decoration(char)
click to toggle source
def apply_to(seq)
# seq.seq_fasta = seq.seq_fasta.slice(start_pos,end_pos) $LOG.debug " Applying #{self.class} to #{seq.seq_name}. This sequence will be ignored due to low or high size " #delete sequence if it was created
end
# File lib/seqtrimnext/actions/action_low_high_size.rb, line 27 def apply_decoration(char) return char.on_magenta end