Table of Contents - bfa-1.1 Documentation
Classes and Modules
- BFA
- BFA::BinaryCigar
- BFA::BinaryCigar::Decode
- BFA::BinaryCigar::Encode
- BFA::Constants
- BFA::Error
- BFA::FourBitSequence
- BFA::FourBitSequence::Decode
- BFA::FourBitSequence::Encode
- BFA::Reader
- BFA::Reader::FormatError
- BFA::Writer
- Integer
- Object
- RGFA
- RGFA::ByteArray
- RGFA::CIGAR
- RGFA::CIGAR::Operation
- RGFA::Line
- String
Methods
- ::encode — BFA::Writer
- ::from_bfa — RGFA
- ::from_file — RGFA
- ::from_gfa — RGFA
- ::new — BFA::Reader
- ::new — BFA::Writer
- ::parse — BFA::Reader
- #add_byte_array — BFA::Writer
- #add_cigar — BFA::Writer
- #add_containments — BFA::Writer
- #add_cstr — BFA::Writer
- #add_data_item — BFA::Writer
- #add_double — BFA::Writer
- #add_edges — BFA::Writer
- #add_fixlenstr — BFA::Writer
- #add_headers — BFA::Writer
- #add_int — BFA::Writer
- #add_links — BFA::Writer
- #add_numeric_array — BFA::Writer
- #add_numeric_value — BFA::Writer
- #add_numeric_values — BFA::Writer
- #add_optfield — BFA::Writer
- #add_optfields — BFA::Writer
- #add_paths — BFA::Writer
- #add_segments — BFA::Writer
- #add_sequence — BFA::Writer
- #add_size_of — BFA::Writer
- #add_string — BFA::Writer
- #add_value — BFA::Writer
- #add_values — BFA::Writer
- #add_varlenstr — BFA::Writer
- #close — BFA::Reader
- #close — BFA::Writer
- #encode — BFA::Writer
- #parse — BFA::Reader
- #parse_4bits — BFA::FourBitSequence::Decode
- #parse_binary_cigar — BFA::BinaryCigar::Decode
- #parse_byte_array — BFA::Reader
- #parse_cigar — BFA::Reader
- #parse_containments — BFA::Reader
- #parse_cstr — BFA::Reader
- #parse_data_item — BFA::Reader
- #parse_edge — BFA::Reader
- #parse_fixlenstr — BFA::Reader
- #parse_headers — BFA::Reader
- #parse_links — BFA::Reader
- #parse_numeric_array — BFA::Reader
- #parse_numeric_value — BFA::Reader
- #parse_numeric_values — BFA::Reader
- #parse_optfield — BFA::Reader
- #parse_optfields — BFA::Reader
- #parse_path — BFA::Reader
- #parse_paths — BFA::Reader
- #parse_segment — BFA::Reader
- #parse_segments — BFA::Reader
- #parse_sequence — BFA::Reader
- #parse_size — BFA::Reader
- #parse_value — BFA::Reader
- #parse_values — BFA::Reader
- #parse_varlenstr — BFA::Reader
- #read! — BFA::Reader
- #replace_fixlenstr — BFA::Writer
- #to_4bits — BFA::FourBitSequence::Encode
- #to_bfa — RGFA
- #to_binary — BFA::BinaryCigar::Encode
- #validate_magic_string! — BFA::Reader
- #write_data — BFA::Writer