bio-old-biofetch-emulator¶ ↑
Emulator that emulates Bio::Fetch
object in BioRuby as if discontinued BioRuby BioFetch server were still alive. It overrides methods and objects in Bio::Fetch
, and if the old BioRuby BioFetch server's URL is given, it intercepts all requests and converts them into existing web services such as TogoWS, KEGG REST API, NCBI E-Utilities, and GenomeNet(genome.jp).
Note: this software may fail to work depending on the status of the above servers.
Installation¶ ↑
gem install bio-old-biofetch-emulator
Usage¶ ↑
require 'bio-old-biofetch-emulator'
In general, to run existing software using the BioRuby BioFetch server, no additional code is needed other than require 'bio-old-biofetch-emulator'
.
The API doc is online. For more code examples see the test files in the source tree.
Project home page¶ ↑
Information on the source tree, documentation, examples, issues and how to contribute, see
github.com/ngoto/bioruby-old-biofetch-emulator
Cite¶ ↑
If you use this software, please cite one of
Biogems.info¶ ↑
This Biogem is published at (biogems.info/index.html#bio-old-biofetch-emulator)
Copyright¶ ↑
Copyright © 2014 Naohisa Goto. See LICENSE.txt for further details.