Table of Contents - cagnut_samtools-0.3.2 Documentation
Pages
Classes and Modules
- CagnutSamtools
- CagnutSamtools::Base
- CagnutSamtools::CheckTools
- CagnutSamtools::Configuration
- CagnutSamtools::DoFlagStat
- CagnutSamtools::MergeBam
- CagnutSamtools::MgBamSoftLink
- CagnutSamtools::Util
Methods
- ::config — CagnutSamtools
- ::load — CagnutSamtools::Configuration
- ::new — CagnutSamtools::DoFlagStat
- ::new — CagnutSamtools::MergeBam
- ::new — CagnutSamtools::MgBamSoftLink
- ::new — CagnutSamtools::Util
- #attributes — CagnutSamtools::Configuration
- #check_ref_related — CagnutSamtools::CheckTools
- #check_samtools — CagnutSamtools::CheckTools
- #check_samtools_index — CagnutSamtools::CheckTools
- #check_tool — CagnutSamtools::CheckTools
- #do_flag_stat — CagnutSamtools::Base
- #do_flag_stat — CagnutSamtools::Util
- #generate_script — CagnutSamtools::DoFlagStat
- #generate_script — CagnutSamtools::MergeBam
- #generate_script — CagnutSamtools::MgBamSoftLink
- #job_params — CagnutSamtools::MergeBam
- #load — CagnutSamtools::Configuration
- #merge_bam — CagnutSamtools::Base
- #merge_bam — CagnutSamtools::Util
- #mg_bam_soft_link — CagnutSamtools::Base
- #mg_bam_soft_link — CagnutSamtools::Util
- #queuing_options — CagnutSamtools::DoFlagStat
- #queuing_options — CagnutSamtools::MergeBam
- #queuing_options — CagnutSamtools::MgBamSoftLink
- #run — CagnutSamtools::DoFlagStat
- #run — CagnutSamtools::MergeBam
- #run — CagnutSamtools::MgBamSoftLink