CHANGELOG.md LICENSE.md Manifest.txt README.md Rakefile bin/kitty lib/copycats.rb lib/copycats/fancies.rb lib/copycats/gene.rb lib/copycats/genome.rb lib/copycats/import/read.rb lib/copycats/import/setup.rb lib/copycats/models/kitty.rb lib/copycats/reports/genes.rb lib/copycats/reports/kitty.rb lib/copycats/reports/mix.rb lib/copycats/reports/traits.rb lib/copycats/schema.rb lib/copycats/tool.rb lib/copycats/traits.rb lib/copycats/traits_timeline.rb lib/copycats/version.rb test/helper.rb test/test_genome.rb test/test_mixgenes.rb test/test_models.rb test/test_traits.rb test/test_version.rb