class ParserExonerate

Public Instance Methods

parse_file(file) click to toggle source
# File lib/gene_assembler/parser_exonerate.rb, line 6
def parse_file(file)
  exonerate=ExonerateResult.new(file,@all)
  return exonerate
end
populate_extra_atributes(contig,item) click to toggle source
# File lib/gene_assembler/parser_exonerate.rb, line 11
def populate_extra_atributes(contig,item) #AƱade los frameshift localizados x el exonerate
              contig.q_frameshift=item.q_frameshift
       contig.s_frameshift=item.s_frameshift
end