Table of Contents - ulla-0.9.9.2 Documentation
Pages
Classes and Modules
- ArrayExtensions
- MathExtensions
- NArrayExtensions
- NMatrixExtensions
- Object
- StringExtensions
- Ulla
- Ulla::CLI
- Ulla::Environment
- Ulla::EnvironmentClassHash
- Ulla::EnvironmentFeature
- Ulla::EnvironmentFeatureArray
- Ulla::Esst
- Ulla::Essts
- Ulla::HeatmapArray
- Ulla::JoyTem
Methods
- ::calculate_pid — Ulla::CLI
- ::calculate_pid_rb — Ulla::CLI
- ::new — Ulla::Environment
- ::new — Ulla::EnvironmentFeature
- ::new — Ulla::Esst
- ::new — Ulla::Essts
- ::new — Ulla::JoyTem
- #[] — Ulla::Essts
- #alignment_length — Ulla::JoyTem
- #blank? — StringExtensions
- #colnames — Ulla::Essts
- #constrained? — Ulla::EnvironmentFeature
- #entry_codes — Ulla::JoyTem
- #entry_descriptions — Ulla::JoyTem
- #group_by_non_residue_labels — Ulla::EnvironmentClassHash
- #group_size — Ulla::EnvironmentClassHash
- #groups_sorted_by_residue_labels — Ulla::EnvironmentClassHash
- #heatmap — Ulla::HeatmapArray
- #heatmap — NMatrixExtensions
- #increase_residue_count — Ulla::Environment
- #interpolate — NMatrixExtensions
- #label_combinations — Ulla::EnvironmentFeatureArray
- #label_combinations_without_aa_type — Ulla::EnvironmentFeatureArray
- #label_set — Ulla::Environment
- #log2 — MathExtensions
- #pretty_string — NArrayExtensions
- #pretty_string — NMatrixExtensions
- #remove_internal_spaces — StringExtensions
- #rgb_to_integer — StringExtensions
- #rownames — Ulla::Essts
- #score — Ulla::Esst
- #scores_from — Ulla::Esst
- #scores_to — Ulla::Esst
- #sequences — Ulla::JoyTem
- #silent? — Ulla::EnvironmentFeature
- #start_with? — StringExtensions
- #sum — ArrayExtensions
- #to_s — Ulla::Environment
- #to_s — Ulla::EnvironmentFeature