module Bio
bio/db/gff/digest/gffparser.rb - Fully digesting parsing logic for GFF3 file¶ ↑
- Copyright
-
Copyright © 2010 Pjotr Prins <pjotr.prins@thebird.nl>
- License
-
The Ruby License
bio/db/gff/gfffasta.rb - Fetch records from a file in FASTA format¶ ↑
- Copyright
-
Copyright © 2010 Pjotr Prins <pjotr.prins@thebird.nl>
- License
-
The Ruby License
This requires a special implementation as it uses an open file and we retain file seek positions.
bio/db/gff/gfffileiterator.rb - Fetch records from a GFF3 file¶ ↑
- Copyright
-
Copyright © 2010 Pjotr Prins <pjotr.prins@thebird.nl>
- License
-
The Ruby License
Record parsing logic for GFF3¶ ↑
- Copyright
-
Copyright © 2011 Pjotr Prins <pjotr.prins@thebird.nl>
- License
-
The Ruby License
bio/db/gff/gffsequence.rb - Assemble mRNA and CDS from GFF¶ ↑
- Copyright
-
Copyright © 2010 Pjotr Prins <pjotr.prins@thebird.nl>
- License
-
The Ruby License
Fetch information from a GFF file