bio-sambamba

Full description goes here

Note: this software is under active development!

Installation

rake build
    rake install

In order to use the gem, you also need sambamba tool installed (version >= 0.2.6).

If you use Debian, you can download a package for your architecture from github downloads.

Otherwise, you need to do the following:

brew install dmd
    brew install ragel
pacman -S dmd libphobos ragel
git clone https://github.com/lomereiter/sambamba.git
    cd sambamba/CLItools/
    make
cp build/sambamba /usr/local/bin

Usage

require 'bio-sambamba'

The API doc is online. For more code examples see the test files in the source tree.

Project home page

Information on the source tree, documentation, examples, issues and how to contribute, see

github.com/lomereiter/bioruby-sambamba

The BioRuby community is on IRC server: irc.freenode.org, channel: bioruby.

Cite

If you use this software, please cite one of

Biogems.info

This Biogem is published at #bio-sambamba

Copyright © 2012 Artem Tarasov. See LICENSE.txt for further details.