Table of Contents - demultiplexer-0.1.2 Documentation
Classes and Modules
Methods
- ::build — IndexBuilder
- ::clear — Screen
- ::new — DataIO
- ::new — Demultiplexer
- ::new — IndexBuilder
- ::new — SampleReader
- ::new — Status
- ::read — SampleReader
- ::reset — Screen
- ::run — Demultiplexer
- #[] — DataIO
- #append_suffix — DataIO
- #close_input_files — DataIO
- #close_output_files — DataIO
- #demultiplex — Demultiplexer
- #each — DataIO
- #extract_suffix — DataIO
- #identify_input_files — DataIO
- #index_check_existing — IndexBuilder
- #index_init — IndexBuilder
- #index_populate — IndexBuilder
- #index_qual_mean_ok? — Demultiplexer
- #index_qual_min_ok? — Demultiplexer
- #index_qual_ok? — Demultiplexer
- #index_reverse_complement — SampleReader
- #match_index — Demultiplexer
- #open_input_files — DataIO
- #open_output_files — DataIO
- #open_output_files_samples — DataIO
- #open_output_files_undet — DataIO
- #permutate — IndexBuilder
- #permutate_word — IndexBuilder
- #samples_check_index_combo — SampleReader
- #samples_check_uniq_id — SampleReader
- #samples_parse — SampleReader
- #samples_read — SampleReader
- #samples_reverse_complement — SampleReader
- #save — Status
- #time_elapsed — Status
- #to_s — Status
- #undetermined_percent — Status
- #uniq_index1 — Status
- #uniq_index2 — Status
- #write_match — Demultiplexer
- #write_undetermined — Demultiplexer