Warning: Permanently added '54.158.11.59' (ECDSA) to the list of known hosts. Running: /usr/bin/copr-rpmbuild --verbose --drop-resultdir --build-id 1758711 --chroot fedora-rawhide-x86_64 --detached Version: 0.40 Task: {'build_id': 1758711, 'buildroot_pkgs': [], 'chroot': 'fedora-rawhide-x86_64', 'enable_net': True, 'fetch_sources_only': True, 'git_hash': '79e9a18280206892e595ea8782f985dfb715a521', 'git_repo': 'alexpl/openbabel/openbabel', 'memory_reqs': 2048, 'package_name': 'openbabel', 'package_version': '3.1.1-4.20201103git9c001b5.fc33', 'project_dirname': 'openbabel', 'project_name': 'openbabel', 'project_owner': 'alexpl', 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/alexpl/openbabel/fedora-rawhide-x86_64/', 'id': 'copr_base', 'name': 'Copr repository'}], 'sandbox': 'alexpl/openbabel--alexpl', 'source_json': {'clone_url': 'https://copr-dist-git.fedorainfracloud.org/git/alexpl/openbabel/openbabel.git', 'committish': '79e9a18280206892e595ea8782f985dfb715a521'}, 'source_type': 8, 'submitter': 'alexpl', 'task_id': '1758711-fedora-rawhide-x86_64', 'timeout': 108000, 'use_bootstrap_container': True, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/alexpl/openbabel/openbabel.git /tmp/copr-rpmbuild-dgqhxivh/obtain-sources/openbabel --depth 500 --no-single-branch cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/alexpl/openbabel/openbabel.git', '/tmp/copr-rpmbuild-dgqhxivh/obtain-sources/openbabel', '--depth', '500', '--no-single-branch'] cwd: . rc: 0 stdout: stderr: Cloning into '/tmp/copr-rpmbuild-dgqhxivh/obtain-sources/openbabel'... Running: git checkout 79e9a18280206892e595ea8782f985dfb715a521 cmd: ['git', 'checkout', '79e9a18280206892e595ea8782f985dfb715a521'] cwd: /tmp/copr-rpmbuild-dgqhxivh/obtain-sources/openbabel rc: 0 stdout: stderr: Note: switching to '79e9a18280206892e595ea8782f985dfb715a521'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at 79e9a18 automatic import of openbabel Running: cp -r . /tmp/copr-rpmbuild-dgqhxivh cmd: ['cp', '-r', '.', '/tmp/copr-rpmbuild-dgqhxivh'] cwd: /tmp/copr-rpmbuild-dgqhxivh/obtain-sources/openbabel rc: 0 stdout: stderr: Generated rpkg config: [rpkg] preprocess_spec = True # auto-packing is deprecated: auto_pack = True [git] lookaside = https://copr-dist-git.fedorainfracloud.org/repo/pkgs/%(ns2)s/%(ns1)s/%(name)s/%(filename)s/%(hashtype)s/%(hash)s/%(filename)s anongiturl = https://copr-dist-git.fedorainfracloud.org/git/%(module)s Writing config into /tmp/copr-rpmbuild-dgqhxivh/obtain-sources/.config/rpkg.conf Running: rpkg -C /tmp/copr-rpmbuild-dgqhxivh/obtain-sources/.config/rpkg.conf sources --outdir /tmp/copr-rpmbuild-dgqhxivh /usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated cmd: ['rpkg', '-C', '/tmp/copr-rpmbuild-dgqhxivh/obtain-sources/.config/rpkg.conf', 'sources', '--outdir', '/tmp/copr-rpmbuild-dgqhxivh'] cwd: /tmp/copr-rpmbuild-dgqhxivh/obtain-sources/openbabel rc: 0 stdout: Downloading openbabel-9c001b5aeb8b985f26d111d811673150607662fa.tar.gz from lookaside cache at copr-dist-git.fedorainfracloud.org stderr: Running (timeout=108000): unbuffer mock --buildsrpm --spec /tmp/copr-rpmbuild-dgqhxivh/openbabel.spec --sources /tmp/copr-rpmbuild-dgqhxivh --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1605003826.047499 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 2.6 starting (python version = 3.9.0)... Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/tmp/copr-rpmbuild-dgqhxivh/openbabel.spec) Config(fedora-rawhide-x86_64) Start: clean chroot Finish: clean chroot Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1605003826.047499/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: enabled HW Info plugin Mock Version: 2.6 INFO: Mock Version: 2.6 Start(bootstrap): dnf install No matches found for the following disable plugin patterns: local, spacewalk Copr repository 385 kB/s | 43 kB 00:00 fedora 27 MB/s | 74 MB 00:02 Dependencies resolved. ======================================================================================= Package Arch Version Repo Size ======================================================================================= Installing: [1mdnf [m noarch 4.4.0-3.fc34 fedora 445 k [1mdnf-plugins-core [m noarch 4.0.18-1.fc34 fedora 34 k Installing dependencies: [1malternatives [m x86_64 1.14-3.fc33 fedora 36 k [1maudit-libs [m x86_64 3.0-0.21.20191104git1c2f876.fc33 fedora 113 k [1mbasesystem [m noarch 11-10.fc33 fedora 6.8 k [1mbash [m x86_64 5.0.17-2.fc33 fedora 1.7 M [1mbzip2-libs [m x86_64 1.0.8-4.fc33 fedora 40 k [1mca-certificates [m noarch 2020.2.41-4.fc33 fedora 352 k [1mcoreutils [m x86_64 8.32-14.fc34 fedora 1.1 M [1mcoreutils-common [m x86_64 8.32-14.fc34 fedora 2.0 M [1mcrypto-policies [m noarch 20200918-1.git85dccc5.fc34 fedora 57 k [1mcurl [m x86_64 7.73.0-2.fc34 fedora 298 k [1mcyrus-sasl-lib [m x86_64 2.1.27-6.fc33 fedora 101 k [1mdnf-data [m noarch 4.4.0-3.fc34 fedora 46 k [1melfutils-default-yama-scope [m noarch 0.182-1.fc34 fedora 17 k [1melfutils-libelf [m x86_64 0.182-1.fc34 fedora 194 k [1melfutils-libs [m x86_64 0.182-1.fc34 fedora 265 k [1mexpat [m x86_64 2.2.8-3.fc33 fedora 102 k [1mfedora-gpg-keys [m noarch 34-0.8 fedora 107 k [1mfedora-release [m noarch 34-0.9 fedora 12 k [1mfedora-release-common [m noarch 34-0.9 fedora 21 k [1mfedora-release-identity-basic [m noarch 34-0.9 fedora 13 k [1mfedora-repos [m noarch 34-0.8 fedora 11 k [1mfedora-repos-rawhide [m noarch 34-0.8 fedora 10 k [1mfile-libs [m x86_64 5.39-3.fc34 fedora 591 k [1mfilesystem [m x86_64 3.14-4.fc34 fedora 1.1 M [1mgawk [m x86_64 5.1.0-2.fc33 fedora 1.0 M [1mgdbm-libs [m x86_64 1:1.18.1-5.fc33 fedora 54 k [1mglib2 [m x86_64 2.67.0-2.fc34 fedora 2.7 M [1mglibc [m x86_64 2.32.9000-14.fc34 fedora 3.5 M [1mglibc-common [m x86_64 2.32.9000-14.fc34 fedora 1.8 M [1mglibc-minimal-langpack [m x86_64 2.32.9000-14.fc34 fedora 95 k [1mgmp [m x86_64 1:6.2.0-5.fc34 fedora 320 k [1mgnupg2 [m x86_64 2.2.23-1.fc34 fedora 2.3 M [1mgnutls [m x86_64 3.6.15-2.fc34 fedora 925 k [1mgpgme [m x86_64 1.14.0-2.fc33 fedora 205 k [1mgrep [m x86_64 3.5-1.fc34 fedora 260 k [1mima-evm-utils [m x86_64 1.3.2-1.fc34 fedora 62 k [1mjson-c [m x86_64 0.14-7.fc33 fedora 41 k [1mkeyutils-libs [m x86_64 1.6-5.fc33 fedora 31 k [1mkrb5-libs [m x86_64 1.18.2-29.fc34 fedora 733 k [1mlibacl [m x86_64 2.2.53-9.fc34 fedora 23 k [1mlibarchive [m x86_64 3.4.3-3.fc33 fedora 390 k [1mlibassuan [m x86_64 2.5.3-4.fc33 fedora 67 k [1mlibattr [m x86_64 2.4.48-10.fc33 fedora 18 k [1mlibblkid [m x86_64 2.36-3.fc34 fedora 103 k [1mlibbrotli [m x86_64 1.0.9-3.fc34 fedora 322 k [1mlibcap [m x86_64 2.44-1.fc34 fedora 60 k [1mlibcap-ng [m x86_64 0.8-1.fc34 fedora 29 k [1mlibcom_err [m x86_64 1.45.6-4.fc33 fedora 27 k [1mlibcomps [m x86_64 0.1.15-5.fc33 fedora 79 k [1mlibcurl [m x86_64 7.73.0-2.fc34 fedora 282 k [1mlibdb [m x86_64 5.3.28-44.fc33 fedora 759 k [1mlibdnf [m x86_64 0.54.2-3.fc34 fedora 607 k [1mlibffi [m x86_64 3.1-26.fc33 fedora 33 k [1mlibgcc [m x86_64 10.2.1-7.fc34 fedora 99 k [1mlibgcrypt [m x86_64 1.8.6-4.fc34 fedora 475 k [1mlibgomp [m x86_64 10.2.1-7.fc34 fedora 260 k [1mlibgpg-error [m x86_64 1.37-2.fc33 fedora 202 k [1mlibidn2 [m x86_64 2.3.0-4.fc33 fedora 104 k [1mlibksba [m x86_64 1.4.0-1.fc34 fedora 150 k [1mlibmetalink [m x86_64 0.1.3-13.fc33 fedora 31 k [1mlibmodulemd [m x86_64 2.9.4-3.fc33 fedora 195 k [1mlibmount [m x86_64 2.36-3.fc34 fedora 132 k [1mlibnghttp2 [m x86_64 1.41.0-3.fc33 fedora 72 k [1mlibnsl2 [m x86_64 1.3.0-1.fc34 fedora 58 k [1mlibpsl [m x86_64 0.21.1-2.fc33 fedora 61 k [1mlibrepo [m x86_64 1.12.1-1.fc34 fedora 97 k [1mlibreport-filesystem [m noarch 2.14.0-12.fc34 fedora 14 k [1mlibselinux [m x86_64 3.1-4.fc34 fedora 84 k [1mlibsemanage [m x86_64 3.1-4.fc34 fedora 115 k [1mlibsepol [m x86_64 3.1-4.fc34 fedora 283 k [1mlibsigsegv [m x86_64 2.11-11.fc33 fedora 26 k [1mlibsmartcols [m x86_64 2.36-3.fc34 fedora 62 k [1mlibsolv [m x86_64 0.7.15-1.fc34 fedora 391 k [1mlibssh [m x86_64 0.9.5-1.fc34 fedora 209 k [1mlibssh-config [m noarch 0.9.5-1.fc34 fedora 11 k [1mlibstdc++ [m x86_64 10.2.1-7.fc34 fedora 619 k [1mlibtasn1 [m x86_64 4.16.0-3.fc33 fedora 75 k [1mlibtirpc [m x86_64 1.2.6-2.rc4.fc33 fedora 95 k [1mlibunistring [m x86_64 0.9.10-9.fc33 fedora 516 k [1mlibusbx [m x86_64 1.0.23-2.fc33 fedora 70 k [1mlibuuid [m x86_64 2.36-3.fc34 fedora 28 k [1mlibverto [m x86_64 0.3.0-11.fc34 fedora 21 k [1mlibxcrypt [m x86_64 4.4.17-1.fc34 fedora 121 k [1mlibxml2 [m x86_64 2.9.10-7.fc34 fedora 743 k [1mlibyaml [m x86_64 0.2.5-3.fc33 fedora 60 k [1mlibzstd [m x86_64 1.4.5-6.fc34 fedora 297 k [1mlua-libs [m x86_64 5.4.1-1.fc34 fedora 215 k [1mlz4-libs [m x86_64 1.9.1-3.fc33 fedora 59 k [1mmpfr [m x86_64 4.1.0-2.fc33 fedora 1.4 M [1mncurses-base [m noarch 6.2-3.20200222.fc33 fedora 60 k [1mncurses-libs [m x86_64 6.2-3.20200222.fc33 fedora 329 k [1mnettle [m x86_64 3.6-3.fc33 fedora 418 k [1mnpth [m x86_64 1.6-5.fc33 fedora 25 k [1mopenldap [m x86_64 2.4.55-1.fc34 fedora 310 k [1mopenssl-libs [m x86_64 1:1.1.1g-15.fc33 fedora 1.4 M [1mp11-kit [m x86_64 0.23.21-2.fc34 fedora 368 k [1mp11-kit-trust [m x86_64 0.23.21-2.fc34 fedora 138 k [1mpcre [m x86_64 8.44-2.fc34 fedora 198 k [1mpcre2 [m x86_64 10.35-8.fc34 fedora 231 k [1mpcre2-syntax [m noarch 10.35-8.fc34 fedora 142 k [1mpopt [m x86_64 1.18-2.fc33 fedora 58 k [1mpublicsuffix-list-dafsa [m noarch 20190417-4.fc33 fedora 55 k [1mpython-pip-wheel [m noarch 20.2.4-1.fc34 fedora 1.3 M [1mpython-setuptools-wheel [m noarch 50.3.2-1.fc34 fedora 471 k [1mpython3 [m x86_64 3.9.0-1.fc34 fedora 27 k [1mpython3-dateutil [m noarch 1:2.8.1-2.fc33 fedora 289 k [1mpython3-distro [m noarch 1.5.0-4.fc33 fedora 36 k [1mpython3-dnf [m noarch 4.4.0-3.fc34 fedora 410 k [1mpython3-dnf-plugins-core [m noarch 4.0.18-1.fc34 fedora 191 k [1mpython3-gpg [m x86_64 1.14.0-2.fc33 fedora 268 k [1mpython3-hawkey [m x86_64 0.54.2-3.fc34 fedora 113 k [1mpython3-libcomps [m x86_64 0.1.15-5.fc33 fedora 51 k [1mpython3-libdnf [m x86_64 0.54.2-3.fc34 fedora 778 k [1mpython3-libs [m x86_64 3.9.0-1.fc34 fedora 7.4 M [1mpython3-rpm [m x86_64 4.16.0-3.fc34 fedora 98 k [1mpython3-setuptools [m noarch 50.3.2-1.fc34 fedora 760 k [1mpython3-six [m noarch 1.15.0-2.fc33 fedora 36 k [1mreadline [m x86_64 8.0-5.fc33 fedora 206 k [1mrpm [m x86_64 4.16.0-3.fc34 fedora 501 k [1mrpm-build-libs [m x86_64 4.16.0-3.fc34 fedora 96 k [1mrpm-libs [m x86_64 4.16.0-3.fc34 fedora 326 k [1mrpm-sign-libs [m x86_64 4.16.0-3.fc34 fedora 26 k [1msed [m x86_64 4.8-6.fc34 fedora 298 k [1msetup [m noarch 2.13.7-2.fc33 fedora 142 k [1mshadow-utils [m x86_64 2:4.8.1-5.fc34 fedora 1.2 M [1msqlite-libs [m x86_64 3.33.0-2.fc34 fedora 621 k [1msystemd-libs [m x86_64 246.6-3.fc34 fedora 578 k [1mtpm2-tss [m x86_64 3.0.1-1.fc34 fedora 587 k [1mtzdata [m noarch 2020d-1.fc34 fedora 430 k [1mxz-libs [m x86_64 5.2.5-3.fc33 fedora 92 k [1mzchunk-libs [m x86_64 1.1.5-3.fc33 fedora 48 k [1mzlib [m x86_64 1.2.11-22.fc33 fedora 92 k Transaction Summary ======================================================================================= Install 134 Packages Total download size: 54 M Installed size: 190 M Downloading Packages: (1/134): alternatives-1.14-3.fc33.x86_64.rpm 1.3 MB/s | 36 kB 00:00 (2/134): audit-libs-3.0-0.21.20191104git1c2f876 3.7 MB/s | 113 kB 00:00 (3/134): basesystem-11-10.fc33.noarch.rpm 223 kB/s | 6.8 kB 00:00 (4/134): bzip2-libs-1.0.8-4.fc33.x86_64.rpm 5.3 MB/s | 40 kB 00:00 (5/134): bash-5.0.17-2.fc33.x86_64.rpm 77 MB/s | 1.7 MB 00:00 (6/134): ca-certificates-2020.2.41-4.fc33.noarc 19 MB/s | 352 kB 00:00 (7/134): coreutils-8.32-14.fc34.x86_64.rpm 63 MB/s | 1.1 MB 00:00 (8/134): crypto-policies-20200918-1.git85dccc5. 5.1 MB/s | 57 kB 00:00 (9/134): coreutils-common-8.32-14.fc34.x86_64.r 100 MB/s | 2.0 MB 00:00 (10/134): curl-7.73.0-2.fc34.x86_64.rpm 21 MB/s | 298 kB 00:00 (11/134): cyrus-sasl-lib-2.1.27-6.fc33.x86_64.r 8.2 MB/s | 101 kB 00:00 (12/134): dnf-4.4.0-3.fc34.noarch.rpm 47 MB/s | 445 kB 00:00 (13/134): dnf-plugins-core-4.0.18-1.fc34.noarch 4.2 MB/s | 34 kB 00:00 (14/134): elfutils-default-yama-scope-0.182-1.f 4.8 MB/s | 17 kB 00:00 (15/134): elfutils-libelf-0.182-1.fc34.x86_64.r 44 MB/s | 194 kB 00:00 (16/134): dnf-data-4.4.0-3.fc34.noarch.rpm 3.0 MB/s | 46 kB 00:00 (17/134): elfutils-libs-0.182-1.fc34.x86_64.rpm 49 MB/s | 265 kB 00:00 (18/134): expat-2.2.8-3.fc33.x86_64.rpm 27 MB/s | 102 kB 00:00 (19/134): fedora-gpg-keys-34-0.8.noarch.rpm 34 MB/s | 107 kB 00:00 (20/134): fedora-release-34-0.9.noarch.rpm 2.9 MB/s | 12 kB 00:00 (21/134): fedora-release-common-34-0.9.noarch.r 5.1 MB/s | 21 kB 00:00 (22/134): fedora-release-identity-basic-34-0.9. 4.9 MB/s | 13 kB 00:00 (23/134): fedora-repos-34-0.8.noarch.rpm 4.1 MB/s | 11 kB 00:00 (24/134): fedora-repos-rawhide-34-0.8.noarch.rp 3.0 MB/s | 10 kB 00:00 (25/134): filesystem-3.14-4.fc34.x86_64.rpm 92 MB/s | 1.1 MB 00:00 (26/134): gawk-5.1.0-2.fc33.x86_64.rpm 60 MB/s | 1.0 MB 00:00 (27/134): gdbm-libs-1.18.1-5.fc33.x86_64.rpm 6.5 MB/s | 54 kB 00:00 (28/134): file-libs-5.39-3.fc34.x86_64.rpm 23 MB/s | 591 kB 00:00 (29/134): glibc-2.32.9000-14.fc34.x86_64.rpm 125 MB/s | 3.5 MB 00:00 (30/134): glibc-common-2.32.9000-14.fc34.x86_64 54 MB/s | 1.8 MB 00:00 (31/134): glibc-minimal-langpack-2.32.9000-14.f 7.2 MB/s | 95 kB 00:00 (32/134): glib2-2.67.0-2.fc34.x86_64.rpm 43 MB/s | 2.7 MB 00:00 (33/134): gmp-6.2.0-5.fc34.x86_64.rpm 18 MB/s | 320 kB 00:00 (34/134): gpgme-1.14.0-2.fc33.x86_64.rpm 19 MB/s | 205 kB 00:00 (35/134): grep-3.5-1.fc34.x86_64.rpm 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Header V4 RSA/SHA256 Signature, key ID 45719a39: NOKEY fedora 1.6 MB/s | 1.6 kB 00:00 Importing GPG key 0x45719A39: Userid : "Fedora (34) " Fingerprint: 8C5B A699 0BDB 26E1 9F2A 1A80 1161 AE69 4571 9A39 From : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-34-primary Key imported successfully fedora 1.6 MB/s | 1.6 kB 00:00 GPG key at file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-34-primary (0x45719A39) is already installed fedora 1.6 MB/s | 1.6 kB 00:00 Importing GPG key 0x9570FF31: Userid : "Fedora (33) " Fingerprint: 963A 2BEB 0200 9608 FE67 EA42 49FD 7749 9570 FF31 From : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-33-primary Key imported successfully Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Running scriptlet: filesystem-3.14-4.fc34.x86_64 1/1 Preparing : 1/1 Installing : libgcc-10.2.1-7.fc34.x86_64 1/134 Running scriptlet: libgcc-10.2.1-7.fc34.x86_64 1/134 Installing : crypto-policies-20200918-1.git85dccc5.fc34.noarc 2/134 Running scriptlet: crypto-policies-20200918-1.git85dccc5.fc34.noarc 2/134 Installing : tzdata-2020d-1.fc34.noarch 3/134 Installing : fedora-release-identity-basic-34-0.9.noarch 4/134 Installing : python-setuptools-wheel-50.3.2-1.fc34.noarch 5/134 Installing : publicsuffix-list-dafsa-20190417-4.fc33.noarch 6/134 Installing : pcre2-syntax-10.35-8.fc34.noarch 7/134 Installing : ncurses-base-6.2-3.20200222.fc33.noarch 8/134 Installing : libssh-config-0.9.5-1.fc34.noarch 9/134 Installing : libreport-filesystem-2.14.0-12.fc34.noarch 10/134 Installing : dnf-data-4.4.0-3.fc34.noarch 11/134 warning: /etc/dnf/dnf.conf created as /etc/dnf/dnf.conf.rpmnew Installing : fedora-gpg-keys-34-0.8.noarch 12/134 Installing : fedora-release-34-0.9.noarch 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Running scriptlet: filesystem-3.14-4.fc34.x86_64 134/134 Running scriptlet: ca-certificates-2020.2.41-4.fc33.noarch 134/134 Running scriptlet: rpm-4.16.0-3.fc34.x86_64 134/134 Running scriptlet: dnf-4.4.0-3.fc34.noarch 134/134 Verifying : alternatives-1.14-3.fc33.x86_64 1/134 Verifying : audit-libs-3.0-0.21.20191104git1c2f876.fc33.x86_ 2/134 Verifying : basesystem-11-10.fc33.noarch 3/134 Verifying : bash-5.0.17-2.fc33.x86_64 4/134 Verifying : bzip2-libs-1.0.8-4.fc33.x86_64 5/134 Verifying : ca-certificates-2020.2.41-4.fc33.noarch 6/134 Verifying : coreutils-8.32-14.fc34.x86_64 7/134 Verifying : coreutils-common-8.32-14.fc34.x86_64 8/134 Verifying : crypto-policies-20200918-1.git85dccc5.fc34.noarc 9/134 Verifying : curl-7.73.0-2.fc34.x86_64 10/134 Verifying : cyrus-sasl-lib-2.1.27-6.fc33.x86_64 11/134 Verifying : dnf-4.4.0-3.fc34.noarch 12/134 Verifying : dnf-data-4.4.0-3.fc34.noarch 13/134 Verifying : dnf-plugins-core-4.0.18-1.fc34.noarch 14/134 Verifying : elfutils-default-yama-scope-0.182-1.fc34.noarch 15/134 Verifying : elfutils-libelf-0.182-1.fc34.x86_64 16/134 Verifying : elfutils-libs-0.182-1.fc34.x86_64 17/134 Verifying : expat-2.2.8-3.fc33.x86_64 18/134 Verifying : fedora-gpg-keys-34-0.8.noarch 19/134 Verifying : fedora-release-34-0.9.noarch 20/134 Verifying : fedora-release-common-34-0.9.noarch 21/134 Verifying : fedora-release-identity-basic-34-0.9.noarch 22/134 Verifying : fedora-repos-34-0.8.noarch 23/134 Verifying : fedora-repos-rawhide-34-0.8.noarch 24/134 Verifying : file-libs-5.39-3.fc34.x86_64 25/134 Verifying : filesystem-3.14-4.fc34.x86_64 26/134 Verifying : gawk-5.1.0-2.fc33.x86_64 27/134 Verifying : gdbm-libs-1:1.18.1-5.fc33.x86_64 28/134 Verifying : glib2-2.67.0-2.fc34.x86_64 29/134 Verifying : glibc-2.32.9000-14.fc34.x86_64 30/134 Verifying : glibc-common-2.32.9000-14.fc34.x86_64 31/134 Verifying : glibc-minimal-langpack-2.32.9000-14.fc34.x86_64 32/134 Verifying : gmp-1:6.2.0-5.fc34.x86_64 33/134 Verifying : gnupg2-2.2.23-1.fc34.x86_64 34/134 Verifying : gnutls-3.6.15-2.fc34.x86_64 35/134 Verifying : gpgme-1.14.0-2.fc33.x86_64 36/134 Verifying : grep-3.5-1.fc34.x86_64 37/134 Verifying : ima-evm-utils-1.3.2-1.fc34.x86_64 38/134 Verifying : json-c-0.14-7.fc33.x86_64 39/134 Verifying : keyutils-libs-1.6-5.fc33.x86_64 40/134 Verifying : krb5-libs-1.18.2-29.fc34.x86_64 41/134 Verifying : libacl-2.2.53-9.fc34.x86_64 42/134 Verifying : libarchive-3.4.3-3.fc33.x86_64 43/134 Verifying : libassuan-2.5.3-4.fc33.x86_64 44/134 Verifying : libattr-2.4.48-10.fc33.x86_64 45/134 Verifying : libblkid-2.36-3.fc34.x86_64 46/134 Verifying : libbrotli-1.0.9-3.fc34.x86_64 47/134 Verifying : libcap-2.44-1.fc34.x86_64 48/134 Verifying : libcap-ng-0.8-1.fc34.x86_64 49/134 Verifying : libcom_err-1.45.6-4.fc33.x86_64 50/134 Verifying : libcomps-0.1.15-5.fc33.x86_64 51/134 Verifying : libcurl-7.73.0-2.fc34.x86_64 52/134 Verifying : libdb-5.3.28-44.fc33.x86_64 53/134 Verifying : libdnf-0.54.2-3.fc34.x86_64 54/134 Verifying : libffi-3.1-26.fc33.x86_64 55/134 Verifying : libgcc-10.2.1-7.fc34.x86_64 56/134 Verifying : libgcrypt-1.8.6-4.fc34.x86_64 57/134 Verifying : libgomp-10.2.1-7.fc34.x86_64 58/134 Verifying : libgpg-error-1.37-2.fc33.x86_64 59/134 Verifying : libidn2-2.3.0-4.fc33.x86_64 60/134 Verifying : libksba-1.4.0-1.fc34.x86_64 61/134 Verifying : libmetalink-0.1.3-13.fc33.x86_64 62/134 Verifying : libmodulemd-2.9.4-3.fc33.x86_64 63/134 Verifying : libmount-2.36-3.fc34.x86_64 64/134 Verifying : libnghttp2-1.41.0-3.fc33.x86_64 65/134 Verifying : libnsl2-1.3.0-1.fc34.x86_64 66/134 Verifying : libpsl-0.21.1-2.fc33.x86_64 67/134 Verifying : librepo-1.12.1-1.fc34.x86_64 68/134 Verifying : libreport-filesystem-2.14.0-12.fc34.noarch 69/134 Verifying : libselinux-3.1-4.fc34.x86_64 70/134 Verifying : libsemanage-3.1-4.fc34.x86_64 71/134 Verifying : libsepol-3.1-4.fc34.x86_64 72/134 Verifying : libsigsegv-2.11-11.fc33.x86_64 73/134 Verifying : libsmartcols-2.36-3.fc34.x86_64 74/134 Verifying : libsolv-0.7.15-1.fc34.x86_64 75/134 Verifying : libssh-0.9.5-1.fc34.x86_64 76/134 Verifying : libssh-config-0.9.5-1.fc34.noarch 77/134 Verifying : libstdc++-10.2.1-7.fc34.x86_64 78/134 Verifying : libtasn1-4.16.0-3.fc33.x86_64 79/134 Verifying : libtirpc-1.2.6-2.rc4.fc33.x86_64 80/134 Verifying : libunistring-0.9.10-9.fc33.x86_64 81/134 Verifying : libusbx-1.0.23-2.fc33.x86_64 82/134 Verifying : libuuid-2.36-3.fc34.x86_64 83/134 Verifying : libverto-0.3.0-11.fc34.x86_64 84/134 Verifying : libxcrypt-4.4.17-1.fc34.x86_64 85/134 Verifying : libxml2-2.9.10-7.fc34.x86_64 86/134 Verifying : libyaml-0.2.5-3.fc33.x86_64 87/134 Verifying : libzstd-1.4.5-6.fc34.x86_64 88/134 Verifying : lua-libs-5.4.1-1.fc34.x86_64 89/134 Verifying : lz4-libs-1.9.1-3.fc33.x86_64 90/134 Verifying : mpfr-4.1.0-2.fc33.x86_64 91/134 Verifying : ncurses-base-6.2-3.20200222.fc33.noarch 92/134 Verifying : ncurses-libs-6.2-3.20200222.fc33.x86_64 93/134 Verifying : nettle-3.6-3.fc33.x86_64 94/134 Verifying : npth-1.6-5.fc33.x86_64 95/134 Verifying : openldap-2.4.55-1.fc34.x86_64 96/134 Verifying : openssl-libs-1:1.1.1g-15.fc33.x86_64 97/134 Verifying : p11-kit-0.23.21-2.fc34.x86_64 98/134 Verifying : p11-kit-trust-0.23.21-2.fc34.x86_64 99/134 Verifying : pcre-8.44-2.fc34.x86_64 100/134 Verifying : pcre2-10.35-8.fc34.x86_64 101/134 Verifying : pcre2-syntax-10.35-8.fc34.noarch 102/134 Verifying : popt-1.18-2.fc33.x86_64 103/134 Verifying : publicsuffix-list-dafsa-20190417-4.fc33.noarch 104/134 Verifying : python-pip-wheel-20.2.4-1.fc34.noarch 105/134 Verifying : python-setuptools-wheel-50.3.2-1.fc34.noarch 106/134 Verifying : python3-3.9.0-1.fc34.x86_64 107/134 Verifying : python3-dateutil-1:2.8.1-2.fc33.noarch 108/134 Verifying : python3-distro-1.5.0-4.fc33.noarch 109/134 Verifying : python3-dnf-4.4.0-3.fc34.noarch 110/134 Verifying : python3-dnf-plugins-core-4.0.18-1.fc34.noarch 111/134 Verifying : python3-gpg-1.14.0-2.fc33.x86_64 112/134 Verifying : python3-hawkey-0.54.2-3.fc34.x86_64 113/134 Verifying : python3-libcomps-0.1.15-5.fc33.x86_64 114/134 Verifying : python3-libdnf-0.54.2-3.fc34.x86_64 115/134 Verifying : python3-libs-3.9.0-1.fc34.x86_64 116/134 Verifying : python3-rpm-4.16.0-3.fc34.x86_64 117/134 Verifying : python3-setuptools-50.3.2-1.fc34.noarch 118/134 Verifying : python3-six-1.15.0-2.fc33.noarch 119/134 Verifying : readline-8.0-5.fc33.x86_64 120/134 Verifying : rpm-4.16.0-3.fc34.x86_64 121/134 Verifying : rpm-build-libs-4.16.0-3.fc34.x86_64 122/134 Verifying : rpm-libs-4.16.0-3.fc34.x86_64 123/134 Verifying : rpm-sign-libs-4.16.0-3.fc34.x86_64 124/134 Verifying : sed-4.8-6.fc34.x86_64 125/134 Verifying : setup-2.13.7-2.fc33.noarch 126/134 Verifying : shadow-utils-2:4.8.1-5.fc34.x86_64 127/134 Verifying : sqlite-libs-3.33.0-2.fc34.x86_64 128/134 Verifying : systemd-libs-246.6-3.fc34.x86_64 129/134 Verifying : tpm2-tss-3.0.1-1.fc34.x86_64 130/134 Verifying : tzdata-2020d-1.fc34.noarch 131/134 Verifying : xz-libs-5.2.5-3.fc33.x86_64 132/134 Verifying : zchunk-libs-1.1.5-3.fc33.x86_64 133/134 Verifying : zlib-1.2.11-22.fc33.x86_64 134/134 Installed: alternatives-1.14-3.fc33.x86_64 audit-libs-3.0-0.21.20191104git1c2f876.fc33.x86_64 basesystem-11-10.fc33.noarch bash-5.0.17-2.fc33.x86_64 bzip2-libs-1.0.8-4.fc33.x86_64 ca-certificates-2020.2.41-4.fc33.noarch coreutils-8.32-14.fc34.x86_64 coreutils-common-8.32-14.fc34.x86_64 crypto-policies-20200918-1.git85dccc5.fc34.noarch curl-7.73.0-2.fc34.x86_64 cyrus-sasl-lib-2.1.27-6.fc33.x86_64 dnf-4.4.0-3.fc34.noarch dnf-data-4.4.0-3.fc34.noarch dnf-plugins-core-4.0.18-1.fc34.noarch elfutils-default-yama-scope-0.182-1.fc34.noarch elfutils-libelf-0.182-1.fc34.x86_64 elfutils-libs-0.182-1.fc34.x86_64 expat-2.2.8-3.fc33.x86_64 fedora-gpg-keys-34-0.8.noarch fedora-release-34-0.9.noarch fedora-release-common-34-0.9.noarch fedora-release-identity-basic-34-0.9.noarch fedora-repos-34-0.8.noarch fedora-repos-rawhide-34-0.8.noarch file-libs-5.39-3.fc34.x86_64 filesystem-3.14-4.fc34.x86_64 gawk-5.1.0-2.fc33.x86_64 gdbm-libs-1:1.18.1-5.fc33.x86_64 glib2-2.67.0-2.fc34.x86_64 glibc-2.32.9000-14.fc34.x86_64 glibc-common-2.32.9000-14.fc34.x86_64 glibc-minimal-langpack-2.32.9000-14.fc34.x86_64 gmp-1:6.2.0-5.fc34.x86_64 gnupg2-2.2.23-1.fc34.x86_64 gnutls-3.6.15-2.fc34.x86_64 gpgme-1.14.0-2.fc33.x86_64 grep-3.5-1.fc34.x86_64 ima-evm-utils-1.3.2-1.fc34.x86_64 json-c-0.14-7.fc33.x86_64 keyutils-libs-1.6-5.fc33.x86_64 krb5-libs-1.18.2-29.fc34.x86_64 libacl-2.2.53-9.fc34.x86_64 libarchive-3.4.3-3.fc33.x86_64 libassuan-2.5.3-4.fc33.x86_64 libattr-2.4.48-10.fc33.x86_64 libblkid-2.36-3.fc34.x86_64 libbrotli-1.0.9-3.fc34.x86_64 libcap-2.44-1.fc34.x86_64 libcap-ng-0.8-1.fc34.x86_64 libcom_err-1.45.6-4.fc33.x86_64 libcomps-0.1.15-5.fc33.x86_64 libcurl-7.73.0-2.fc34.x86_64 libdb-5.3.28-44.fc33.x86_64 libdnf-0.54.2-3.fc34.x86_64 libffi-3.1-26.fc33.x86_64 libgcc-10.2.1-7.fc34.x86_64 libgcrypt-1.8.6-4.fc34.x86_64 libgomp-10.2.1-7.fc34.x86_64 libgpg-error-1.37-2.fc33.x86_64 libidn2-2.3.0-4.fc33.x86_64 libksba-1.4.0-1.fc34.x86_64 libmetalink-0.1.3-13.fc33.x86_64 libmodulemd-2.9.4-3.fc33.x86_64 libmount-2.36-3.fc34.x86_64 libnghttp2-1.41.0-3.fc33.x86_64 libnsl2-1.3.0-1.fc34.x86_64 libpsl-0.21.1-2.fc33.x86_64 librepo-1.12.1-1.fc34.x86_64 libreport-filesystem-2.14.0-12.fc34.noarch libselinux-3.1-4.fc34.x86_64 libsemanage-3.1-4.fc34.x86_64 libsepol-3.1-4.fc34.x86_64 libsigsegv-2.11-11.fc33.x86_64 libsmartcols-2.36-3.fc34.x86_64 libsolv-0.7.15-1.fc34.x86_64 libssh-0.9.5-1.fc34.x86_64 libssh-config-0.9.5-1.fc34.noarch libstdc++-10.2.1-7.fc34.x86_64 libtasn1-4.16.0-3.fc33.x86_64 libtirpc-1.2.6-2.rc4.fc33.x86_64 libunistring-0.9.10-9.fc33.x86_64 libusbx-1.0.23-2.fc33.x86_64 libuuid-2.36-3.fc34.x86_64 libverto-0.3.0-11.fc34.x86_64 libxcrypt-4.4.17-1.fc34.x86_64 libxml2-2.9.10-7.fc34.x86_64 libyaml-0.2.5-3.fc33.x86_64 libzstd-1.4.5-6.fc34.x86_64 lua-libs-5.4.1-1.fc34.x86_64 lz4-libs-1.9.1-3.fc33.x86_64 mpfr-4.1.0-2.fc33.x86_64 ncurses-base-6.2-3.20200222.fc33.noarch ncurses-libs-6.2-3.20200222.fc33.x86_64 nettle-3.6-3.fc33.x86_64 npth-1.6-5.fc33.x86_64 openldap-2.4.55-1.fc34.x86_64 openssl-libs-1:1.1.1g-15.fc33.x86_64 p11-kit-0.23.21-2.fc34.x86_64 p11-kit-trust-0.23.21-2.fc34.x86_64 pcre-8.44-2.fc34.x86_64 pcre2-10.35-8.fc34.x86_64 pcre2-syntax-10.35-8.fc34.noarch popt-1.18-2.fc33.x86_64 publicsuffix-list-dafsa-20190417-4.fc33.noarch python-pip-wheel-20.2.4-1.fc34.noarch python-setuptools-wheel-50.3.2-1.fc34.noarch python3-3.9.0-1.fc34.x86_64 python3-dateutil-1:2.8.1-2.fc33.noarch python3-distro-1.5.0-4.fc33.noarch python3-dnf-4.4.0-3.fc34.noarch python3-dnf-plugins-core-4.0.18-1.fc34.noarch python3-gpg-1.14.0-2.fc33.x86_64 python3-hawkey-0.54.2-3.fc34.x86_64 python3-libcomps-0.1.15-5.fc33.x86_64 python3-libdnf-0.54.2-3.fc34.x86_64 python3-libs-3.9.0-1.fc34.x86_64 python3-rpm-4.16.0-3.fc34.x86_64 python3-setuptools-50.3.2-1.fc34.noarch python3-six-1.15.0-2.fc33.noarch readline-8.0-5.fc33.x86_64 rpm-4.16.0-3.fc34.x86_64 rpm-build-libs-4.16.0-3.fc34.x86_64 rpm-libs-4.16.0-3.fc34.x86_64 rpm-sign-libs-4.16.0-3.fc34.x86_64 sed-4.8-6.fc34.x86_64 setup-2.13.7-2.fc33.noarch shadow-utils-2:4.8.1-5.fc34.x86_64 sqlite-libs-3.33.0-2.fc34.x86_64 systemd-libs-246.6-3.fc34.x86_64 tpm2-tss-3.0.1-1.fc34.x86_64 tzdata-2020d-1.fc34.noarch xz-libs-5.2.5-3.fc33.x86_64 zchunk-libs-1.1.5-3.fc33.x86_64 zlib-1.2.11-22.fc33.x86_64 Complete! Finish(bootstrap): dnf install Start(bootstrap): creating root cache Finish(bootstrap): creating root cache Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-1605003826.047499/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin Mock Version: 2.6 INFO: Mock Version: 2.6 Start: dnf install No matches found for the following disable plugin patterns: local, spacewalk Copr repository 912 kB/s | 43 kB 00:00 fedora 27 MB/s | 74 MB 00:02 Dependencies resolved. ======================================================================================= Package Arch Version Repo Size ======================================================================================= Installing group/module packages: [1mbash [m x86_64 5.0.17-2.fc33 fedora 1.7 M [1mbzip2 [m x86_64 1.0.8-4.fc33 fedora 52 k [1mcoreutils [m x86_64 8.32-14.fc34 fedora 1.1 M [1mcpio [m x86_64 2.13-8.fc33 fedora 273 k [1mdiffutils [m x86_64 3.7-7.fc34 fedora 390 k [1mfedora-release-common [m noarch 34-0.9 fedora 21 k [1mfindutils [m x86_64 1:4.7.0-7.fc33 fedora 539 k [1mgawk [m x86_64 5.1.0-2.fc33 fedora 1.0 M [1mglibc-minimal-langpack [m x86_64 2.32.9000-14.fc34 fedora 95 k [1mgrep [m x86_64 3.5-1.fc34 fedora 260 k [1mgzip [m x86_64 1.10-3.fc33 fedora 152 k [1minfo [m x86_64 6.7-8.fc33 fedora 228 k [1mmake [m x86_64 1:4.3-2.fc33 fedora 539 k [1mpatch [m x86_64 2.7.6-13.fc33 fedora 129 k [1mredhat-rpm-config [m noarch 177-1.fc34 fedora 65 k [1mrpm-build [m x86_64 4.16.0-3.fc34 fedora 96 k [1msed [m x86_64 4.8-6.fc34 fedora 298 k [1mshadow-utils [m x86_64 2:4.8.1-5.fc34 fedora 1.2 M [1mtar [m x86_64 2:1.32-6.fc33 fedora 880 k [1munzip [m x86_64 6.0-49.fc33 fedora 181 k [1mutil-linux [m x86_64 2.36-3.fc34 fedora 2.6 M [1mwhich [m x86_64 2.21-20.fc33 fedora 41 k [1mxz [m x86_64 5.2.5-3.fc33 fedora 216 k Installing dependencies: [1malternatives [m x86_64 1.14-3.fc33 fedora 36 k [1maudit-libs [m x86_64 3.0-0.21.20191104git1c2f876.fc33 fedora 113 k [1mbasesystem [m noarch 11-10.fc33 fedora 6.8 k [1mbinutils [m x86_64 2.35.1-13.fc34 fedora 5.3 M [1mbinutils-gold [m x86_64 2.35.1-13.fc34 fedora 750 k [1mbzip2-libs [m x86_64 1.0.8-4.fc33 fedora 40 k [1mca-certificates [m noarch 2020.2.41-4.fc33 fedora 352 k [1mcoreutils-common [m x86_64 8.32-14.fc34 fedora 2.0 M [1mcracklib [m x86_64 2.9.6-24.fc33 fedora 83 k [1mcrypto-policies [m noarch 20200918-1.git85dccc5.fc34 fedora 57 k [1mcurl [m x86_64 7.73.0-2.fc34 fedora 298 k [1mcyrus-sasl-lib [m x86_64 2.1.27-6.fc33 fedora 101 k [1mdwz [m x86_64 0.13-4.fc33 fedora 106 k [1med [m x86_64 1.14.2-9.fc33 fedora 75 k [1mefi-srpm-macros [m noarch 4-5.fc33 fedora 21 k [1melfutils [m x86_64 0.182-1.fc34 fedora 529 k [1melfutils-debuginfod-client [m x86_64 0.182-1.fc34 fedora 33 k [1melfutils-default-yama-scope [m noarch 0.182-1.fc34 fedora 17 k [1melfutils-libelf [m x86_64 0.182-1.fc34 fedora 194 k [1melfutils-libs [m x86_64 0.182-1.fc34 fedora 265 k [1mexpat [m x86_64 2.2.8-3.fc33 fedora 102 k [1mfedora-gpg-keys [m noarch 34-0.8 fedora 107 k [1mfedora-release [m noarch 34-0.9 fedora 12 k [1mfedora-release-identity-basic [m noarch 34-0.9 fedora 13 k [1mfedora-repos [m noarch 34-0.8 fedora 11 k [1mfedora-repos-rawhide [m noarch 34-0.8 fedora 10 k [1mfile [m x86_64 5.39-3.fc34 fedora 51 k [1mfile-libs [m x86_64 5.39-3.fc34 fedora 591 k [1mfilesystem [m x86_64 3.14-4.fc34 fedora 1.1 M [1mfonts-srpm-macros [m noarch 1:2.0.5-4.fc33 fedora 27 k [1mfpc-srpm-macros [m noarch 1.3-2.fc33 fedora 7.6 k [1mgc [m x86_64 8.0.4-4.fc33 fedora 104 k [1mgdb-minimal [m x86_64 10.1-1.fc34 fedora 3.6 M [1mghc-srpm-macros [m noarch 1.5.0-3.fc33 fedora 7.7 k [1mglibc [m x86_64 2.32.9000-14.fc34 fedora 3.5 M [1mglibc-common [m x86_64 2.32.9000-14.fc34 fedora 1.8 M [1mgmp [m x86_64 1:6.2.0-5.fc34 fedora 320 k [1mgnat-srpm-macros [m noarch 4-12.fc33 fedora 8.2 k [1mgo-srpm-macros [m noarch 3.0.9-1.fc34 fedora 25 k [1mguile22 [m x86_64 2.2.6-6.fc34 fedora 6.6 M [1mkernel-srpm-macros [m noarch 1.0-3.fc33 fedora 7.2 k [1mkeyutils-libs [m x86_64 1.6-5.fc33 fedora 31 k [1mkrb5-libs [m x86_64 1.18.2-29.fc34 fedora 733 k [1mlibacl [m x86_64 2.2.53-9.fc34 fedora 23 k [1mlibarchive [m x86_64 3.4.3-3.fc33 fedora 390 k [1mlibattr [m x86_64 2.4.48-10.fc33 fedora 18 k [1mlibblkid [m x86_64 2.36-3.fc34 fedora 103 k [1mlibbrotli [m x86_64 1.0.9-3.fc34 fedora 322 k [1mlibcap [m x86_64 2.44-1.fc34 fedora 60 k [1mlibcap-ng [m x86_64 0.8-1.fc34 fedora 29 k [1mlibcom_err [m x86_64 1.45.6-4.fc33 fedora 27 k [1mlibcurl [m x86_64 7.73.0-2.fc34 fedora 282 k [1mlibdb [m x86_64 5.3.28-44.fc33 fedora 759 k [1mlibeconf [m x86_64 0.3.8-4.fc33 fedora 24 k [1mlibfdisk [m x86_64 2.36-3.fc34 fedora 153 k [1mlibffi [m x86_64 3.1-26.fc33 fedora 33 k [1mlibgcc [m x86_64 10.2.1-7.fc34 fedora 99 k [1mlibgcrypt [m x86_64 1.8.6-4.fc34 fedora 475 k [1mlibgomp [m x86_64 10.2.1-7.fc34 fedora 260 k [1mlibgpg-error [m x86_64 1.37-2.fc33 fedora 202 k [1mlibidn2 [m x86_64 2.3.0-4.fc33 fedora 104 k [1mlibmetalink [m x86_64 0.1.3-13.fc33 fedora 31 k [1mlibmount [m x86_64 2.36-3.fc34 fedora 132 k [1mlibnghttp2 [m x86_64 1.41.0-3.fc33 fedora 72 k [1mlibnsl2 [m x86_64 1.3.0-1.fc34 fedora 58 k [1mlibpkgconf [m x86_64 1.7.3-5.fc34 fedora 36 k [1mlibpsl [m x86_64 0.21.1-2.fc33 fedora 61 k [1mlibpwquality [m x86_64 1.4.4-1.fc34 fedora 104 k [1mlibselinux [m x86_64 3.1-4.fc34 fedora 84 k [1mlibsemanage [m x86_64 3.1-4.fc34 fedora 115 k [1mlibsepol [m x86_64 3.1-4.fc34 fedora 283 k [1mlibsigsegv [m x86_64 2.11-11.fc33 fedora 26 k [1mlibsmartcols [m x86_64 2.36-3.fc34 fedora 62 k [1mlibssh [m x86_64 0.9.5-1.fc34 fedora 209 k [1mlibssh-config [m noarch 0.9.5-1.fc34 fedora 11 k [1mlibstdc++ [m x86_64 10.2.1-7.fc34 fedora 619 k [1mlibtasn1 [m x86_64 4.16.0-3.fc33 fedora 75 k [1mlibtirpc [m x86_64 1.2.6-2.rc4.fc33 fedora 95 k [1mlibtool-ltdl [m x86_64 2.4.6-36.fc33 fedora 36 k [1mlibunistring [m x86_64 0.9.10-9.fc33 fedora 516 k [1mlibutempter [m x86_64 1.2.1-3.fc34 fedora 26 k [1mlibuuid [m x86_64 2.36-3.fc34 fedora 28 k [1mlibverto [m x86_64 0.3.0-11.fc34 fedora 21 k [1mlibxcrypt [m x86_64 4.4.17-1.fc34 fedora 121 k [1mlibxml2 [m x86_64 2.9.10-7.fc34 fedora 743 k [1mlibzstd [m x86_64 1.4.5-6.fc34 fedora 297 k [1mlua-libs [m x86_64 5.4.1-1.fc34 fedora 215 k [1mlua-srpm-macros [m noarch 1-2.fc34 fedora 7.9 k [1mlz4-libs [m x86_64 1.9.1-3.fc33 fedora 59 k [1mmpfr [m x86_64 4.1.0-2.fc33 fedora 1.4 M [1mncurses-base [m noarch 6.2-3.20200222.fc33 fedora 60 k [1mncurses-libs [m x86_64 6.2-3.20200222.fc33 fedora 329 k [1mnim-srpm-macros [m noarch 3-3.fc33 fedora 8.3 k [1mocaml-srpm-macros [m noarch 6-3.fc33 fedora 7.7 k [1mopenblas-srpm-macros [m noarch 2-8.fc33 fedora 7.2 k [1mopenldap [m x86_64 2.4.55-1.fc34 fedora 310 k [1mopenssl-libs [m x86_64 1:1.1.1g-15.fc33 fedora 1.4 M [1mp11-kit [m x86_64 0.23.21-2.fc34 fedora 368 k [1mp11-kit-trust [m x86_64 0.23.21-2.fc34 fedora 138 k [1mpam [m x86_64 1.4.0-7.fc34 fedora 559 k [1mpcre [m x86_64 8.44-2.fc34 fedora 198 k [1mpcre2 [m x86_64 10.35-8.fc34 fedora 231 k [1mpcre2-syntax [m noarch 10.35-8.fc34 fedora 142 k [1mperl-srpm-macros [m noarch 1-38.fc33 fedora 8.3 k [1mpkgconf [m x86_64 1.7.3-5.fc34 fedora 41 k [1mpkgconf-m4 [m noarch 1.7.3-5.fc34 fedora 14 k [1mpkgconf-pkg-config [m x86_64 1.7.3-5.fc34 fedora 10 k [1mpopt [m x86_64 1.18-2.fc33 fedora 58 k [1mpublicsuffix-list-dafsa [m noarch 20190417-4.fc33 fedora 55 k [1mpython-srpm-macros [m noarch 3.9-10.fc34 fedora 21 k [1mqt5-srpm-macros [m noarch 5.15.1-1.fc34 fedora 8.4 k [1mreadline [m x86_64 8.0-5.fc33 fedora 206 k [1mrpm [m x86_64 4.16.0-3.fc34 fedora 501 k [1mrpm-build-libs [m x86_64 4.16.0-3.fc34 fedora 96 k [1mrpm-libs [m x86_64 4.16.0-3.fc34 fedora 326 k [1mrust-srpm-macros [m noarch 15-2.fc33 fedora 9.8 k [1msetup [m noarch 2.13.7-2.fc33 fedora 142 k [1msqlite-libs [m x86_64 3.33.0-2.fc34 fedora 621 k [1msystemd-libs [m x86_64 246.6-3.fc34 fedora 578 k [1mtzdata [m noarch 2020d-1.fc34 fedora 430 k [1mxxhash-libs [m x86_64 0.8.0-1.fc33 fedora 41 k [1mxz-libs [m x86_64 5.2.5-3.fc33 fedora 92 k [1mzip [m x86_64 3.0-27.fc33 fedora 258 k [1mzlib [m x86_64 1.2.11-22.fc33 fedora 92 k [1mzstd [m x86_64 1.4.5-6.fc34 fedora 539 k Installing Groups: Buildsystem building group Transaction Summary ======================================================================================= Install 148 Packages Total download size: 57 M Installed size: 224 M Downloading Packages: (1/148): alternatives-1.14-3.fc33.x86_64.rpm 612 kB/s | 36 kB 00:00 (2/148): basesystem-11-10.fc33.noarch.rpm 115 kB/s | 6.8 kB 00:00 (3/148): audit-libs-3.0-0.21.20191104git1c2f876 1.8 MB/s | 113 kB 00:00 (4/148): bash-5.0.17-2.fc33.x86_64.rpm 77 MB/s | 1.7 MB 00:00 (5/148): binutils-2.35.1-13.fc34.x86_64.rpm 100 MB/s | 5.3 MB 00:00 (6/148): binutils-gold-2.35.1-13.fc34.x86_64.rp 13 MB/s | 750 kB 00:00 (7/148): bzip2-1.0.8-4.fc33.x86_64.rpm 1.6 MB/s | 52 kB 00:00 (8/148): bzip2-libs-1.0.8-4.fc33.x86_64.rpm 13 MB/s | 40 kB 00:00 (9/148): ca-certificates-2020.2.41-4.fc33.noarc 43 MB/s | 352 kB 00:00 (10/148): coreutils-8.32-14.fc34.x86_64.rpm 66 MB/s | 1.1 MB 00:00 (11/148): cpio-2.13-8.fc33.x86_64.rpm 27 MB/s | 273 kB 00:00 (12/148): cracklib-2.9.6-24.fc33.x86_64.rpm 13 MB/s | 83 kB 00:00 (13/148): crypto-policies-20200918-1.git85dccc5 14 MB/s | 57 kB 00:00 (14/148): curl-7.73.0-2.fc34.x86_64.rpm 54 MB/s | 298 kB 00:00 (15/148): cyrus-sasl-lib-2.1.27-6.fc33.x86_64.r 17 MB/s | 101 kB 00:00 (16/148): diffutils-3.7-7.fc34.x86_64.rpm 61 MB/s | 390 kB 00:00 (17/148): coreutils-common-8.32-14.fc34.x86_64. 46 MB/s | 2.0 MB 00:00 (18/148): dwz-0.13-4.fc33.x86_64.rpm 8.3 MB/s | 106 kB 00:00 (19/148): ed-1.14.2-9.fc33.x86_64.rpm 6.9 MB/s | 75 kB 00:00 (20/148): efi-srpm-macros-4-5.fc33.noarch.rpm 9.1 MB/s | 21 kB 00:00 (21/148): elfutils-debuginfod-client-0.182-1.fc 11 MB/s | 33 kB 00:00 (22/148): elfutils-default-yama-scope-0.182-1.f 4.1 MB/s | 17 kB 00:00 (23/148): elfutils-libelf-0.182-1.fc34.x86_64.r 34 MB/s | 194 kB 00:00 (24/148): elfutils-libs-0.182-1.fc34.x86_64.rpm 52 MB/s | 265 kB 00:00 (25/148): elfutils-0.182-1.fc34.x86_64.rpm 30 MB/s | 529 kB 00:00 (26/148): expat-2.2.8-3.fc33.x86_64.rpm 16 MB/s | 102 kB 00:00 (27/148): fedora-gpg-keys-34-0.8.noarch.rpm 21 MB/s | 107 kB 00:00 (28/148): fedora-release-34-0.9.noarch.rpm 5.6 MB/s | 12 kB 00:00 (29/148): fedora-release-common-34-0.9.noarch.r 6.3 MB/s | 21 kB 00:00 (30/148): fedora-release-identity-basic-34-0.9. 5.0 MB/s | 13 kB 00:00 (31/148): fedora-repos-34-0.8.noarch.rpm 4.0 MB/s | 11 kB 00:00 (32/148): fedora-repos-rawhide-34-0.8.noarch.rp 4.8 MB/s | 10 kB 00:00 (33/148): file-5.39-3.fc34.x86_64.rpm 16 MB/s | 51 kB 00:00 (34/148): file-libs-5.39-3.fc34.x86_64.rpm 82 MB/s | 591 kB 00:00 (35/148): filesystem-3.14-4.fc34.x86_64.rpm 73 MB/s | 1.1 MB 00:00 (36/148): findutils-4.7.0-7.fc33.x86_64.rpm 36 MB/s | 539 kB 00:00 (37/148): fonts-srpm-macros-2.0.5-4.fc33.noarch 3.1 MB/s | 27 kB 00:00 (38/148): fpc-srpm-macros-1.3-2.fc33.noarch.rpm 3.4 MB/s | 7.6 kB 00:00 (39/148): gc-8.0.4-4.fc33.x86_64.rpm 24 MB/s | 104 kB 00:00 (40/148): gdb-minimal-10.1-1.fc34.x86_64.rpm 126 MB/s | 3.6 MB 00:00 (41/148): ghc-srpm-macros-1.5.0-3.fc33.noarch.r 325 kB/s | 7.7 kB 00:00 (42/148): gawk-5.1.0-2.fc33.x86_64.rpm 22 MB/s | 1.0 MB 00:00 (43/148): glibc-2.32.9000-14.fc34.x86_64.rpm 96 MB/s | 3.5 MB 00:00 (44/148): glibc-minimal-langpack-2.32.9000-14.f 4.0 MB/s | 95 kB 00:00 (45/148): glibc-common-2.32.9000-14.fc34.x86_64 38 MB/s | 1.8 MB 00:00 (46/148): gmp-6.2.0-5.fc34.x86_64.rpm 21 MB/s | 320 kB 00:00 (47/148): gnat-srpm-macros-4-12.fc33.noarch.rpm 665 kB/s | 8.2 kB 00:00 (48/148): go-srpm-macros-3.0.9-1.fc34.noarch.rp 6.4 MB/s | 25 kB 00:00 (49/148): guile22-2.2.6-6.fc34.x86_64.rpm 115 MB/s | 6.6 MB 00:00 (50/148): grep-3.5-1.fc34.x86_64.rpm 4.2 MB/s | 260 kB 00:00 (51/148): gzip-1.10-3.fc33.x86_64.rpm 2.6 MB/s | 152 kB 00:00 (52/148): info-6.7-8.fc33.x86_64.rpm 45 MB/s | 228 kB 00:00 (53/148): kernel-srpm-macros-1.0-3.fc33.noarch. 2.9 MB/s | 7.2 kB 00:00 (54/148): keyutils-libs-1.6-5.fc33.x86_64.rpm 9.4 MB/s | 31 kB 00:00 (55/148): libacl-2.2.53-9.fc34.x86_64.rpm 7.3 MB/s | 23 kB 00:00 (56/148): krb5-libs-1.18.2-29.fc34.x86_64.rpm 80 MB/s | 733 kB 00:00 (57/148): libarchive-3.4.3-3.fc33.x86_64.rpm 38 MB/s | 390 kB 00:00 (58/148): libattr-2.4.48-10.fc33.x86_64.rpm 2.5 MB/s | 18 kB 00:00 (59/148): libblkid-2.36-3.fc34.x86_64.rpm 25 MB/s | 103 kB 00:00 (60/148): libbrotli-1.0.9-3.fc34.x86_64.rpm 69 MB/s | 322 kB 00:00 (61/148): libcap-2.44-1.fc34.x86_64.rpm 12 MB/s | 60 kB 00:00 (62/148): libcap-ng-0.8-1.fc34.x86_64.rpm 5.3 MB/s | 29 kB 00:00 (63/148): libcom_err-1.45.6-4.fc33.x86_64.rpm 9.9 MB/s | 27 kB 00:00 (64/148): libcurl-7.73.0-2.fc34.x86_64.rpm 38 MB/s | 282 kB 00:00 (65/148): libdb-5.3.28-44.fc33.x86_64.rpm 74 MB/s | 759 kB 00:00 (66/148): libeconf-0.3.8-4.fc33.x86_64.rpm 3.8 MB/s | 24 kB 00:00 (67/148): libfdisk-2.36-3.fc34.x86_64.rpm 43 MB/s | 153 kB 00:00 (68/148): libffi-3.1-26.fc33.x86_64.rpm 8.3 MB/s | 33 kB 00:00 (69/148): libgcc-10.2.1-7.fc34.x86_64.rpm 19 MB/s | 99 kB 00:00 (70/148): libgcrypt-1.8.6-4.fc34.x86_64.rpm 74 MB/s | 475 kB 00:00 (71/148): libgomp-10.2.1-7.fc34.x86_64.rpm 33 MB/s | 260 kB 00:00 (72/148): libgpg-error-1.37-2.fc33.x86_64.rpm 22 MB/s | 202 kB 00:00 (73/148): libidn2-2.3.0-4.fc33.x86_64.rpm 30 MB/s | 104 kB 00:00 (74/148): libmetalink-0.1.3-13.fc33.x86_64.rpm 8.4 MB/s | 31 kB 00:00 (75/148): libmount-2.36-3.fc34.x86_64.rpm 23 MB/s | 132 kB 00:00 (76/148): libnghttp2-1.41.0-3.fc33.x86_64.rpm 18 MB/s | 72 kB 00:00 (77/148): libnsl2-1.3.0-1.fc34.x86_64.rpm 13 MB/s | 58 kB 00:00 (78/148): libpkgconf-1.7.3-5.fc34.x86_64.rpm 13 MB/s | 36 kB 00:00 (79/148): libpsl-0.21.1-2.fc33.x86_64.rpm 22 MB/s | 61 kB 00:00 (80/148): libpwquality-1.4.4-1.fc34.x86_64.rpm 24 MB/s | 104 kB 00:00 (81/148): libselinux-3.1-4.fc34.x86_64.rpm 21 MB/s | 84 kB 00:00 (82/148): libsemanage-3.1-4.fc34.x86_64.rpm 34 MB/s | 115 kB 00:00 (83/148): libsigsegv-2.11-11.fc33.x86_64.rpm 9.0 MB/s | 26 kB 00:00 (84/148): libsepol-3.1-4.fc34.x86_64.rpm 47 MB/s | 283 kB 00:00 (85/148): libsmartcols-2.36-3.fc34.x86_64.rpm 12 MB/s | 62 kB 00:00 (86/148): libssh-0.9.5-1.fc34.x86_64.rpm 46 MB/s | 209 kB 00:00 (87/148): libssh-config-0.9.5-1.fc34.noarch.rpm 4.9 MB/s | 11 kB 00:00 (88/148): libstdc++-10.2.1-7.fc34.x86_64.rpm 86 MB/s | 619 kB 00:00 (89/148): libtasn1-4.16.0-3.fc33.x86_64.rpm 9.9 MB/s | 75 kB 00:00 (90/148): libtirpc-1.2.6-2.rc4.fc33.x86_64.rpm 17 MB/s | 95 kB 00:00 (91/148): libtool-ltdl-2.4.6-36.fc33.x86_64.rpm 13 MB/s | 36 kB 00:00 (92/148): libutempter-1.2.1-3.fc34.x86_64.rpm 9.4 MB/s | 26 kB 00:00 (93/148): libuuid-2.36-3.fc34.x86_64.rpm 8.3 MB/s | 28 kB 00:00 (94/148): libverto-0.3.0-11.fc34.x86_64.rpm 8.0 MB/s | 21 kB 00:00 (95/148): libxcrypt-4.4.17-1.fc34.x86_64.rpm 34 MB/s | 121 kB 00:00 (96/148): libxml2-2.9.10-7.fc34.x86_64.rpm 94 MB/s | 743 kB 00:00 (97/148): libunistring-0.9.10-9.fc33.x86_64.rpm 27 MB/s | 516 kB 00:00 (98/148): libzstd-1.4.5-6.fc34.x86_64.rpm 26 MB/s | 297 kB 00:00 (99/148): lua-libs-5.4.1-1.fc34.x86_64.rpm 32 MB/s | 215 kB 00:00 (100/148): lua-srpm-macros-1-2.fc34.noarch.rpm 3.1 MB/s | 7.9 kB 00:00 (101/148): lz4-libs-1.9.1-3.fc33.x86_64.rpm 16 MB/s | 59 kB 00:00 (102/148): mpfr-4.1.0-2.fc33.x86_64.rpm 110 MB/s | 1.4 MB 00:00 (103/148): ncurses-base-6.2-3.20200222.fc33.noa 5.0 MB/s | 60 kB 00:00 (104/148): make-4.3-2.fc33.x86_64.rpm 26 MB/s | 539 kB 00:00 (105/148): ncurses-libs-6.2-3.20200222.fc33.x86 46 MB/s | 329 kB 00:00 (106/148): nim-srpm-macros-3-3.fc33.noarch.rpm 1.5 MB/s | 8.3 kB 00:00 (107/148): ocaml-srpm-macros-6-3.fc33.noarch.rp 2.2 MB/s | 7.7 kB 00:00 (108/148): openblas-srpm-macros-2-8.fc33.noarch 1.5 MB/s | 7.2 kB 00:00 (109/148): openldap-2.4.55-1.fc34.x86_64.rpm 41 MB/s | 310 kB 00:00 (110/148): openssl-libs-1.1.1g-15.fc33.x86_64.r 89 MB/s | 1.4 MB 00:00 (111/148): p11-kit-trust-0.23.21-2.fc34.x86_64. 14 MB/s | 138 kB 00:00 (112/148): p11-kit-0.23.21-2.fc34.x86_64.rpm 19 MB/s | 368 kB 00:00 (113/148): pam-1.4.0-7.fc34.x86_64.rpm 62 MB/s | 559 kB 00:00 (114/148): patch-2.7.6-13.fc33.x86_64.rpm 15 MB/s | 129 kB 00:00 (115/148): pcre-8.44-2.fc34.x86_64.rpm 31 MB/s | 198 kB 00:00 (116/148): pcre2-10.35-8.fc34.x86_64.rpm 51 MB/s | 231 kB 00:00 (117/148): pcre2-syntax-10.35-8.fc34.noarch.rpm 25 MB/s | 142 kB 00:00 (118/148): perl-srpm-macros-1-38.fc33.noarch.rp 1.5 MB/s | 8.3 kB 00:00 (119/148): pkgconf-1.7.3-5.fc34.x86_64.rpm 17 MB/s | 41 kB 00:00 (120/148): pkgconf-m4-1.7.3-5.fc34.noarch.rpm 4.1 MB/s | 14 kB 00:00 (121/148): pkgconf-pkg-config-1.7.3-5.fc34.x86_ 3.2 MB/s | 10 kB 00:00 (122/148): popt-1.18-2.fc33.x86_64.rpm 22 MB/s | 58 kB 00:00 (123/148): publicsuffix-list-dafsa-20190417-4.f 19 MB/s | 55 kB 00:00 (124/148): python-srpm-macros-3.9-10.fc34.noarc 6.6 MB/s | 21 kB 00:00 (125/148): qt5-srpm-macros-5.15.1-1.fc34.noarch 2.8 MB/s | 8.4 kB 00:00 (126/148): redhat-rpm-config-177-1.fc34.noarch. 18 MB/s | 65 kB 00:00 (127/148): rpm-4.16.0-3.fc34.x86_64.rpm 69 MB/s | 501 kB 00:00 (128/148): readline-8.0-5.fc33.x86_64.rpm 20 MB/s | 206 kB 00:00 (129/148): rpm-build-4.16.0-3.fc34.x86_64.rpm 17 MB/s | 96 kB 00:00 (130/148): rpm-build-libs-4.16.0-3.fc34.x86_64. 25 MB/s | 96 kB 00:00 (131/148): rpm-libs-4.16.0-3.fc34.x86_64.rpm 73 MB/s | 326 kB 00:00 (132/148): rust-srpm-macros-15-2.fc33.noarch.rp 2.1 MB/s | 9.8 kB 00:00 (133/148): sed-4.8-6.fc34.x86_64.rpm 43 MB/s | 298 kB 00:00 (134/148): shadow-utils-4.8.1-5.fc34.x86_64.rpm 102 MB/s | 1.2 MB 00:00 (135/148): setup-2.13.7-2.fc33.noarch.rpm 9.0 MB/s | 142 kB 00:00 (136/148): sqlite-libs-3.33.0-2.fc34.x86_64.rpm 42 MB/s | 621 kB 00:00 (137/148): tzdata-2020d-1.fc34.noarch.rpm 37 MB/s | 430 kB 00:00 (138/148): systemd-libs-246.6-3.fc34.x86_64.rpm 23 MB/s | 578 kB 00:00 (139/148): tar-1.32-6.fc33.x86_64.rpm 31 MB/s | 880 kB 00:00 (140/148): unzip-6.0-49.fc33.x86_64.rpm 15 MB/s | 181 kB 00:00 (141/148): which-2.21-20.fc33.x86_64.rpm 14 MB/s | 41 kB 00:00 (142/148): xxhash-libs-0.8.0-1.fc33.x86_64.rpm 9.6 MB/s | 41 kB 00:00 (143/148): xz-5.2.5-3.fc33.x86_64.rpm 37 MB/s | 216 kB 00:00 (144/148): xz-libs-5.2.5-3.fc33.x86_64.rpm 17 MB/s | 92 kB 00:00 (145/148): zip-3.0-27.fc33.x86_64.rpm 53 MB/s | 258 kB 00:00 (146/148): zlib-1.2.11-22.fc33.x86_64.rpm 23 MB/s | 92 kB 00:00 (147/148): zstd-1.4.5-6.fc34.x86_64.rpm 76 MB/s | 539 kB 00:00 (148/148): util-linux-2.36-3.fc34.x86_64.rpm 47 MB/s | 2.6 MB 00:00 -------------------------------------------------------------------------------- Total 76 MB/s | 57 MB 00:00 warning: /var/lib/mock/fedora-rawhide-x86_64-1605003826.047499/root/var/cache/dnf/fedora-2d95c80a1fa0a67d/packages/alternatives-1.14-3.fc33.x86_64.rpm: Header V4 RSA/SHA256 Signature, key ID 45719a39: NOKEY fedora 1.6 MB/s | 1.6 kB 00:00 Importing GPG key 0x45719A39: Userid : "Fedora (34) " Fingerprint: 8C5B A699 0BDB 26E1 9F2A 1A80 1161 AE69 4571 9A39 From : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-34-primary Key imported successfully fedora 1.6 MB/s | 1.6 kB 00:00 GPG key at file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-34-primary (0x45719A39) is already installed fedora 1.6 MB/s | 1.6 kB 00:00 Importing GPG key 0x9570FF31: Userid : "Fedora (33) " Fingerprint: 963A 2BEB 0200 9608 FE67 EA42 49FD 7749 9570 FF31 From : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-33-primary Key imported successfully Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Running scriptlet: filesystem-3.14-4.fc34.x86_64 1/1 Preparing : 1/1 Installing : libgcc-10.2.1-7.fc34.x86_64 1/148 Running scriptlet: libgcc-10.2.1-7.fc34.x86_64 1/148 Installing : crypto-policies-20200918-1.git85dccc5.fc34.noarc 2/148 Running scriptlet: crypto-policies-20200918-1.git85dccc5.fc34.noarc 2/148 Installing : fedora-release-identity-basic-34-0.9.noarch 3/148 Installing : tzdata-2020d-1.fc34.noarch 4/148 Installing : rust-srpm-macros-15-2.fc33.noarch 5/148 Installing : qt5-srpm-macros-5.15.1-1.fc34.noarch 6/148 Installing : publicsuffix-list-dafsa-20190417-4.fc33.noarch 7/148 Installing : pkgconf-m4-1.7.3-5.fc34.noarch 8/148 Installing : perl-srpm-macros-1-38.fc33.noarch 9/148 Installing : pcre2-syntax-10.35-8.fc34.noarch 10/148 Installing : openblas-srpm-macros-2-8.fc33.noarch 11/148 Installing : ocaml-srpm-macros-6-3.fc33.noarch 12/148 Installing : nim-srpm-macros-3-3.fc33.noarch 13/148 Installing : ncurses-base-6.2-3.20200222.fc33.noarch 14/148 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137/148 Installing : rpm-build-libs-4.16.0-3.fc34.x86_64 138/148 Installing : efi-srpm-macros-4-5.fc33.noarch 139/148 Installing : fonts-srpm-macros-1:2.0.5-4.fc33.noarch 140/148 Installing : go-srpm-macros-3.0.9-1.fc34.noarch 141/148 Installing : lua-srpm-macros-1-2.fc34.noarch 142/148 Installing : python-srpm-macros-3.9-10.fc34.noarch 143/148 Installing : redhat-rpm-config-177-1.fc34.noarch 144/148 Installing : rpm-build-4.16.0-3.fc34.x86_64 145/148 Installing : util-linux-2.36-3.fc34.x86_64 146/148 Running scriptlet: util-linux-2.36-3.fc34.x86_64 146/148 Installing : make-1:4.3-2.fc33.x86_64 147/148 Installing : which-2.21-20.fc33.x86_64 148/148 Running scriptlet: filesystem-3.14-4.fc34.x86_64 148/148 Running scriptlet: ca-certificates-2020.2.41-4.fc33.noarch 148/148 Running scriptlet: rpm-4.16.0-3.fc34.x86_64 148/148 Running scriptlet: which-2.21-20.fc33.x86_64 148/148 Verifying : alternatives-1.14-3.fc33.x86_64 1/148 Verifying : audit-libs-3.0-0.21.20191104git1c2f876.fc33.x86_ 2/148 Verifying : basesystem-11-10.fc33.noarch 3/148 Verifying : bash-5.0.17-2.fc33.x86_64 4/148 Verifying : binutils-2.35.1-13.fc34.x86_64 5/148 Verifying : binutils-gold-2.35.1-13.fc34.x86_64 6/148 Verifying : bzip2-1.0.8-4.fc33.x86_64 7/148 Verifying : bzip2-libs-1.0.8-4.fc33.x86_64 8/148 Verifying : ca-certificates-2020.2.41-4.fc33.noarch 9/148 Verifying : coreutils-8.32-14.fc34.x86_64 10/148 Verifying : coreutils-common-8.32-14.fc34.x86_64 11/148 Verifying : cpio-2.13-8.fc33.x86_64 12/148 Verifying : cracklib-2.9.6-24.fc33.x86_64 13/148 Verifying : crypto-policies-20200918-1.git85dccc5.fc34.noarc 14/148 Verifying : curl-7.73.0-2.fc34.x86_64 15/148 Verifying : cyrus-sasl-lib-2.1.27-6.fc33.x86_64 16/148 Verifying : diffutils-3.7-7.fc34.x86_64 17/148 Verifying : dwz-0.13-4.fc33.x86_64 18/148 Verifying : ed-1.14.2-9.fc33.x86_64 19/148 Verifying : efi-srpm-macros-4-5.fc33.noarch 20/148 Verifying : elfutils-0.182-1.fc34.x86_64 21/148 Verifying : elfutils-debuginfod-client-0.182-1.fc34.x86_64 22/148 Verifying : elfutils-default-yama-scope-0.182-1.fc34.noarch 23/148 Verifying : elfutils-libelf-0.182-1.fc34.x86_64 24/148 Verifying : elfutils-libs-0.182-1.fc34.x86_64 25/148 Verifying : expat-2.2.8-3.fc33.x86_64 26/148 Verifying : fedora-gpg-keys-34-0.8.noarch 27/148 Verifying : fedora-release-34-0.9.noarch 28/148 Verifying : fedora-release-common-34-0.9.noarch 29/148 Verifying : fedora-release-identity-basic-34-0.9.noarch 30/148 Verifying : fedora-repos-34-0.8.noarch 31/148 Verifying : fedora-repos-rawhide-34-0.8.noarch 32/148 Verifying : file-5.39-3.fc34.x86_64 33/148 Verifying : file-libs-5.39-3.fc34.x86_64 34/148 Verifying : filesystem-3.14-4.fc34.x86_64 35/148 Verifying : findutils-1:4.7.0-7.fc33.x86_64 36/148 Verifying : fonts-srpm-macros-1:2.0.5-4.fc33.noarch 37/148 Verifying : fpc-srpm-macros-1.3-2.fc33.noarch 38/148 Verifying : gawk-5.1.0-2.fc33.x86_64 39/148 Verifying : gc-8.0.4-4.fc33.x86_64 40/148 Verifying : gdb-minimal-10.1-1.fc34.x86_64 41/148 Verifying : ghc-srpm-macros-1.5.0-3.fc33.noarch 42/148 Verifying : glibc-2.32.9000-14.fc34.x86_64 43/148 Verifying : glibc-common-2.32.9000-14.fc34.x86_64 44/148 Verifying : glibc-minimal-langpack-2.32.9000-14.fc34.x86_64 45/148 Verifying : gmp-1:6.2.0-5.fc34.x86_64 46/148 Verifying : gnat-srpm-macros-4-12.fc33.noarch 47/148 Verifying : go-srpm-macros-3.0.9-1.fc34.noarch 48/148 Verifying : grep-3.5-1.fc34.x86_64 49/148 Verifying : guile22-2.2.6-6.fc34.x86_64 50/148 Verifying : gzip-1.10-3.fc33.x86_64 51/148 Verifying : info-6.7-8.fc33.x86_64 52/148 Verifying : kernel-srpm-macros-1.0-3.fc33.noarch 53/148 Verifying : keyutils-libs-1.6-5.fc33.x86_64 54/148 Verifying : krb5-libs-1.18.2-29.fc34.x86_64 55/148 Verifying : libacl-2.2.53-9.fc34.x86_64 56/148 Verifying : libarchive-3.4.3-3.fc33.x86_64 57/148 Verifying : libattr-2.4.48-10.fc33.x86_64 58/148 Verifying : libblkid-2.36-3.fc34.x86_64 59/148 Verifying : libbrotli-1.0.9-3.fc34.x86_64 60/148 Verifying : libcap-2.44-1.fc34.x86_64 61/148 Verifying : libcap-ng-0.8-1.fc34.x86_64 62/148 Verifying : libcom_err-1.45.6-4.fc33.x86_64 63/148 Verifying : libcurl-7.73.0-2.fc34.x86_64 64/148 Verifying : libdb-5.3.28-44.fc33.x86_64 65/148 Verifying : libeconf-0.3.8-4.fc33.x86_64 66/148 Verifying : libfdisk-2.36-3.fc34.x86_64 67/148 Verifying : libffi-3.1-26.fc33.x86_64 68/148 Verifying : libgcc-10.2.1-7.fc34.x86_64 69/148 Verifying : libgcrypt-1.8.6-4.fc34.x86_64 70/148 Verifying : libgomp-10.2.1-7.fc34.x86_64 71/148 Verifying : libgpg-error-1.37-2.fc33.x86_64 72/148 Verifying : libidn2-2.3.0-4.fc33.x86_64 73/148 Verifying : libmetalink-0.1.3-13.fc33.x86_64 74/148 Verifying : libmount-2.36-3.fc34.x86_64 75/148 Verifying : libnghttp2-1.41.0-3.fc33.x86_64 76/148 Verifying : libnsl2-1.3.0-1.fc34.x86_64 77/148 Verifying : libpkgconf-1.7.3-5.fc34.x86_64 78/148 Verifying : libpsl-0.21.1-2.fc33.x86_64 79/148 Verifying : libpwquality-1.4.4-1.fc34.x86_64 80/148 Verifying : libselinux-3.1-4.fc34.x86_64 81/148 Verifying : libsemanage-3.1-4.fc34.x86_64 82/148 Verifying : libsepol-3.1-4.fc34.x86_64 83/148 Verifying : libsigsegv-2.11-11.fc33.x86_64 84/148 Verifying : libsmartcols-2.36-3.fc34.x86_64 85/148 Verifying : libssh-0.9.5-1.fc34.x86_64 86/148 Verifying : libssh-config-0.9.5-1.fc34.noarch 87/148 Verifying : libstdc++-10.2.1-7.fc34.x86_64 88/148 Verifying : libtasn1-4.16.0-3.fc33.x86_64 89/148 Verifying : libtirpc-1.2.6-2.rc4.fc33.x86_64 90/148 Verifying : libtool-ltdl-2.4.6-36.fc33.x86_64 91/148 Verifying : libunistring-0.9.10-9.fc33.x86_64 92/148 Verifying : libutempter-1.2.1-3.fc34.x86_64 93/148 Verifying : libuuid-2.36-3.fc34.x86_64 94/148 Verifying : libverto-0.3.0-11.fc34.x86_64 95/148 Verifying : libxcrypt-4.4.17-1.fc34.x86_64 96/148 Verifying : libxml2-2.9.10-7.fc34.x86_64 97/148 Verifying : libzstd-1.4.5-6.fc34.x86_64 98/148 Verifying : lua-libs-5.4.1-1.fc34.x86_64 99/148 Verifying : lua-srpm-macros-1-2.fc34.noarch 100/148 Verifying : lz4-libs-1.9.1-3.fc33.x86_64 101/148 Verifying : make-1:4.3-2.fc33.x86_64 102/148 Verifying : mpfr-4.1.0-2.fc33.x86_64 103/148 Verifying : ncurses-base-6.2-3.20200222.fc33.noarch 104/148 Verifying : ncurses-libs-6.2-3.20200222.fc33.x86_64 105/148 Verifying : nim-srpm-macros-3-3.fc33.noarch 106/148 Verifying : ocaml-srpm-macros-6-3.fc33.noarch 107/148 Verifying : openblas-srpm-macros-2-8.fc33.noarch 108/148 Verifying : openldap-2.4.55-1.fc34.x86_64 109/148 Verifying : openssl-libs-1:1.1.1g-15.fc33.x86_64 110/148 Verifying : p11-kit-0.23.21-2.fc34.x86_64 111/148 Verifying : p11-kit-trust-0.23.21-2.fc34.x86_64 112/148 Verifying : pam-1.4.0-7.fc34.x86_64 113/148 Verifying : patch-2.7.6-13.fc33.x86_64 114/148 Verifying : pcre-8.44-2.fc34.x86_64 115/148 Verifying : pcre2-10.35-8.fc34.x86_64 116/148 Verifying : pcre2-syntax-10.35-8.fc34.noarch 117/148 Verifying : perl-srpm-macros-1-38.fc33.noarch 118/148 Verifying : pkgconf-1.7.3-5.fc34.x86_64 119/148 Verifying : pkgconf-m4-1.7.3-5.fc34.noarch 120/148 Verifying : pkgconf-pkg-config-1.7.3-5.fc34.x86_64 121/148 Verifying : popt-1.18-2.fc33.x86_64 122/148 Verifying : publicsuffix-list-dafsa-20190417-4.fc33.noarch 123/148 Verifying : python-srpm-macros-3.9-10.fc34.noarch 124/148 Verifying : qt5-srpm-macros-5.15.1-1.fc34.noarch 125/148 Verifying : readline-8.0-5.fc33.x86_64 126/148 Verifying : redhat-rpm-config-177-1.fc34.noarch 127/148 Verifying : rpm-4.16.0-3.fc34.x86_64 128/148 Verifying : rpm-build-4.16.0-3.fc34.x86_64 129/148 Verifying : rpm-build-libs-4.16.0-3.fc34.x86_64 130/148 Verifying : rpm-libs-4.16.0-3.fc34.x86_64 131/148 Verifying : rust-srpm-macros-15-2.fc33.noarch 132/148 Verifying : sed-4.8-6.fc34.x86_64 133/148 Verifying : setup-2.13.7-2.fc33.noarch 134/148 Verifying : shadow-utils-2:4.8.1-5.fc34.x86_64 135/148 Verifying : sqlite-libs-3.33.0-2.fc34.x86_64 136/148 Verifying : systemd-libs-246.6-3.fc34.x86_64 137/148 Verifying : tar-2:1.32-6.fc33.x86_64 138/148 Verifying : tzdata-2020d-1.fc34.noarch 139/148 Verifying : unzip-6.0-49.fc33.x86_64 140/148 Verifying : util-linux-2.36-3.fc34.x86_64 141/148 Verifying : which-2.21-20.fc33.x86_64 142/148 Verifying : xxhash-libs-0.8.0-1.fc33.x86_64 143/148 Verifying : xz-5.2.5-3.fc33.x86_64 144/148 Verifying : xz-libs-5.2.5-3.fc33.x86_64 145/148 Verifying : zip-3.0-27.fc33.x86_64 146/148 Verifying : zlib-1.2.11-22.fc33.x86_64 147/148 Verifying : zstd-1.4.5-6.fc34.x86_64 148/148 Installed: alternatives-1.14-3.fc33.x86_64 audit-libs-3.0-0.21.20191104git1c2f876.fc33.x86_64 basesystem-11-10.fc33.noarch bash-5.0.17-2.fc33.x86_64 binutils-2.35.1-13.fc34.x86_64 binutils-gold-2.35.1-13.fc34.x86_64 bzip2-1.0.8-4.fc33.x86_64 bzip2-libs-1.0.8-4.fc33.x86_64 ca-certificates-2020.2.41-4.fc33.noarch coreutils-8.32-14.fc34.x86_64 coreutils-common-8.32-14.fc34.x86_64 cpio-2.13-8.fc33.x86_64 cracklib-2.9.6-24.fc33.x86_64 crypto-policies-20200918-1.git85dccc5.fc34.noarch curl-7.73.0-2.fc34.x86_64 cyrus-sasl-lib-2.1.27-6.fc33.x86_64 diffutils-3.7-7.fc34.x86_64 dwz-0.13-4.fc33.x86_64 ed-1.14.2-9.fc33.x86_64 efi-srpm-macros-4-5.fc33.noarch elfutils-0.182-1.fc34.x86_64 elfutils-debuginfod-client-0.182-1.fc34.x86_64 elfutils-default-yama-scope-0.182-1.fc34.noarch elfutils-libelf-0.182-1.fc34.x86_64 elfutils-libs-0.182-1.fc34.x86_64 expat-2.2.8-3.fc33.x86_64 fedora-gpg-keys-34-0.8.noarch fedora-release-34-0.9.noarch fedora-release-common-34-0.9.noarch fedora-release-identity-basic-34-0.9.noarch fedora-repos-34-0.8.noarch fedora-repos-rawhide-34-0.8.noarch file-5.39-3.fc34.x86_64 file-libs-5.39-3.fc34.x86_64 filesystem-3.14-4.fc34.x86_64 findutils-1:4.7.0-7.fc33.x86_64 fonts-srpm-macros-1:2.0.5-4.fc33.noarch fpc-srpm-macros-1.3-2.fc33.noarch gawk-5.1.0-2.fc33.x86_64 gc-8.0.4-4.fc33.x86_64 gdb-minimal-10.1-1.fc34.x86_64 ghc-srpm-macros-1.5.0-3.fc33.noarch glibc-2.32.9000-14.fc34.x86_64 glibc-common-2.32.9000-14.fc34.x86_64 glibc-minimal-langpack-2.32.9000-14.fc34.x86_64 gmp-1:6.2.0-5.fc34.x86_64 gnat-srpm-macros-4-12.fc33.noarch go-srpm-macros-3.0.9-1.fc34.noarch grep-3.5-1.fc34.x86_64 guile22-2.2.6-6.fc34.x86_64 gzip-1.10-3.fc33.x86_64 info-6.7-8.fc33.x86_64 kernel-srpm-macros-1.0-3.fc33.noarch keyutils-libs-1.6-5.fc33.x86_64 krb5-libs-1.18.2-29.fc34.x86_64 libacl-2.2.53-9.fc34.x86_64 libarchive-3.4.3-3.fc33.x86_64 libattr-2.4.48-10.fc33.x86_64 libblkid-2.36-3.fc34.x86_64 libbrotli-1.0.9-3.fc34.x86_64 libcap-2.44-1.fc34.x86_64 libcap-ng-0.8-1.fc34.x86_64 libcom_err-1.45.6-4.fc33.x86_64 libcurl-7.73.0-2.fc34.x86_64 libdb-5.3.28-44.fc33.x86_64 libeconf-0.3.8-4.fc33.x86_64 libfdisk-2.36-3.fc34.x86_64 libffi-3.1-26.fc33.x86_64 libgcc-10.2.1-7.fc34.x86_64 libgcrypt-1.8.6-4.fc34.x86_64 libgomp-10.2.1-7.fc34.x86_64 libgpg-error-1.37-2.fc33.x86_64 libidn2-2.3.0-4.fc33.x86_64 libmetalink-0.1.3-13.fc33.x86_64 libmount-2.36-3.fc34.x86_64 libnghttp2-1.41.0-3.fc33.x86_64 libnsl2-1.3.0-1.fc34.x86_64 libpkgconf-1.7.3-5.fc34.x86_64 libpsl-0.21.1-2.fc33.x86_64 libpwquality-1.4.4-1.fc34.x86_64 libselinux-3.1-4.fc34.x86_64 libsemanage-3.1-4.fc34.x86_64 libsepol-3.1-4.fc34.x86_64 libsigsegv-2.11-11.fc33.x86_64 libsmartcols-2.36-3.fc34.x86_64 libssh-0.9.5-1.fc34.x86_64 libssh-config-0.9.5-1.fc34.noarch libstdc++-10.2.1-7.fc34.x86_64 libtasn1-4.16.0-3.fc33.x86_64 libtirpc-1.2.6-2.rc4.fc33.x86_64 libtool-ltdl-2.4.6-36.fc33.x86_64 libunistring-0.9.10-9.fc33.x86_64 libutempter-1.2.1-3.fc34.x86_64 libuuid-2.36-3.fc34.x86_64 libverto-0.3.0-11.fc34.x86_64 libxcrypt-4.4.17-1.fc34.x86_64 libxml2-2.9.10-7.fc34.x86_64 libzstd-1.4.5-6.fc34.x86_64 lua-libs-5.4.1-1.fc34.x86_64 lua-srpm-macros-1-2.fc34.noarch lz4-libs-1.9.1-3.fc33.x86_64 make-1:4.3-2.fc33.x86_64 mpfr-4.1.0-2.fc33.x86_64 ncurses-base-6.2-3.20200222.fc33.noarch ncurses-libs-6.2-3.20200222.fc33.x86_64 nim-srpm-macros-3-3.fc33.noarch ocaml-srpm-macros-6-3.fc33.noarch openblas-srpm-macros-2-8.fc33.noarch openldap-2.4.55-1.fc34.x86_64 openssl-libs-1:1.1.1g-15.fc33.x86_64 p11-kit-0.23.21-2.fc34.x86_64 p11-kit-trust-0.23.21-2.fc34.x86_64 pam-1.4.0-7.fc34.x86_64 patch-2.7.6-13.fc33.x86_64 pcre-8.44-2.fc34.x86_64 pcre2-10.35-8.fc34.x86_64 pcre2-syntax-10.35-8.fc34.noarch perl-srpm-macros-1-38.fc33.noarch pkgconf-1.7.3-5.fc34.x86_64 pkgconf-m4-1.7.3-5.fc34.noarch pkgconf-pkg-config-1.7.3-5.fc34.x86_64 popt-1.18-2.fc33.x86_64 publicsuffix-list-dafsa-20190417-4.fc33.noarch python-srpm-macros-3.9-10.fc34.noarch qt5-srpm-macros-5.15.1-1.fc34.noarch readline-8.0-5.fc33.x86_64 redhat-rpm-config-177-1.fc34.noarch rpm-4.16.0-3.fc34.x86_64 rpm-build-4.16.0-3.fc34.x86_64 rpm-build-libs-4.16.0-3.fc34.x86_64 rpm-libs-4.16.0-3.fc34.x86_64 rust-srpm-macros-15-2.fc33.noarch sed-4.8-6.fc34.x86_64 setup-2.13.7-2.fc33.noarch shadow-utils-2:4.8.1-5.fc34.x86_64 sqlite-libs-3.33.0-2.fc34.x86_64 systemd-libs-246.6-3.fc34.x86_64 tar-2:1.32-6.fc33.x86_64 tzdata-2020d-1.fc34.noarch unzip-6.0-49.fc33.x86_64 util-linux-2.36-3.fc34.x86_64 which-2.21-20.fc33.x86_64 xxhash-libs-0.8.0-1.fc33.x86_64 xz-5.2.5-3.fc33.x86_64 xz-libs-5.2.5-3.fc33.x86_64 zip-3.0-27.fc33.x86_64 zlib-1.2.11-22.fc33.x86_64 zstd-1.4.5-6.fc34.x86_64 Complete! Finish: dnf install Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: libfdisk-2.36-3.fc34.x86_64 fedora-release-identity-basic-34-0.9.noarch libnghttp2-1.41.0-3.fc33.x86_64 libcap-2.44-1.fc34.x86_64 gmp-6.2.0-5.fc34.x86_64 ca-certificates-2020.2.41-4.fc33.noarch rpm-build-4.16.0-3.fc34.x86_64 libpkgconf-1.7.3-5.fc34.x86_64 pam-1.4.0-7.fc34.x86_64 ncurses-base-6.2-3.20200222.fc33.noarch file-libs-5.39-3.fc34.x86_64 filesystem-3.14-4.fc34.x86_64 grep-3.5-1.fc34.x86_64 binutils-gold-2.35.1-13.fc34.x86_64 fedora-release-common-34-0.9.noarch libnsl2-1.3.0-1.fc34.x86_64 fedora-gpg-keys-34-0.8.noarch libtool-ltdl-2.4.6-36.fc33.x86_64 sed-4.8-6.fc34.x86_64 libgpg-error-1.37-2.fc33.x86_64 libtasn1-4.16.0-3.fc33.x86_64 ocaml-srpm-macros-6-3.fc33.noarch bash-5.0.17-2.fc33.x86_64 systemd-libs-246.6-3.fc34.x86_64 libbrotli-1.0.9-3.fc34.x86_64 fedora-repos-rawhide-34-0.8.noarch libgomp-10.2.1-7.fc34.x86_64 expat-2.2.8-3.fc33.x86_64 nim-srpm-macros-3-3.fc33.noarch pcre-8.44-2.fc34.x86_64 zstd-1.4.5-6.fc34.x86_64 libxml2-2.9.10-7.fc34.x86_64 crypto-policies-20200918-1.git85dccc5.fc34.noarch rpm-build-libs-4.16.0-3.fc34.x86_64 binutils-2.35.1-13.fc34.x86_64 p11-kit-0.23.21-2.fc34.x86_64 rust-srpm-macros-15-2.fc33.noarch openblas-srpm-macros-2-8.fc33.noarch libsigsegv-2.11-11.fc33.x86_64 libmetalink-0.1.3-13.fc33.x86_64 libverto-0.3.0-11.fc34.x86_64 ed-1.14.2-9.fc33.x86_64 coreutils-common-8.32-14.fc34.x86_64 efi-srpm-macros-4-5.fc33.noarch lz4-libs-1.9.1-3.fc33.x86_64 unzip-6.0-49.fc33.x86_64 audit-libs-3.0-0.21.20191104git1c2f876.fc33.x86_64 openssl-libs-1.1.1g-15.fc33.x86_64 readline-8.0-5.fc33.x86_64 pcre2-10.35-8.fc34.x86_64 go-srpm-macros-3.0.9-1.fc34.noarch libxcrypt-4.4.17-1.fc34.x86_64 diffutils-3.7-7.fc34.x86_64 elfutils-0.182-1.fc34.x86_64 zip-3.0-27.fc33.x86_64 libeconf-0.3.8-4.fc33.x86_64 libtirpc-1.2.6-2.rc4.fc33.x86_64 findutils-4.7.0-7.fc33.x86_64 xxhash-libs-0.8.0-1.fc33.x86_64 elfutils-libs-0.182-1.fc34.x86_64 kernel-srpm-macros-1.0-3.fc33.noarch gdb-minimal-10.1-1.fc34.x86_64 fpc-srpm-macros-1.3-2.fc33.noarch libattr-2.4.48-10.fc33.x86_64 libgcrypt-1.8.6-4.fc34.x86_64 libuuid-2.36-3.fc34.x86_64 patch-2.7.6-13.fc33.x86_64 popt-1.18-2.fc33.x86_64 tzdata-2020d-1.fc34.noarch libstdc++-10.2.1-7.fc34.x86_64 bzip2-libs-1.0.8-4.fc33.x86_64 info-6.7-8.fc33.x86_64 gzip-1.10-3.fc33.x86_64 libpwquality-1.4.4-1.fc34.x86_64 guile22-2.2.6-6.fc34.x86_64 cracklib-2.9.6-24.fc33.x86_64 ghc-srpm-macros-1.5.0-3.fc33.noarch lua-libs-5.4.1-1.fc34.x86_64 libsemanage-3.1-4.fc34.x86_64 libffi-3.1-26.fc33.x86_64 libselinux-3.1-4.fc34.x86_64 gawk-5.1.0-2.fc33.x86_64 lua-srpm-macros-1-2.fc34.noarch dwz-0.13-4.fc33.x86_64 fedora-release-34-0.9.noarch publicsuffix-list-dafsa-20190417-4.fc33.noarch xz-libs-5.2.5-3.fc33.x86_64 mpfr-4.1.0-2.fc33.x86_64 gpg-pubkey-45719a39-5f2c0192 libdb-5.3.28-44.fc33.x86_64 ncurses-libs-6.2-3.20200222.fc33.x86_64 perl-srpm-macros-1-38.fc33.noarch krb5-libs-1.18.2-29.fc34.x86_64 make-4.3-2.fc33.x86_64 setup-2.13.7-2.fc33.noarch libcom_err-1.45.6-4.fc33.x86_64 pkgconf-1.7.3-5.fc34.x86_64 libunistring-0.9.10-9.fc33.x86_64 keyutils-libs-1.6-5.fc33.x86_64 libzstd-1.4.5-6.fc34.x86_64 libutempter-1.2.1-3.fc34.x86_64 p11-kit-trust-0.23.21-2.fc34.x86_64 gnat-srpm-macros-4-12.fc33.noarch gc-8.0.4-4.fc33.x86_64 elfutils-default-yama-scope-0.182-1.fc34.noarch bzip2-1.0.8-4.fc33.x86_64 shadow-utils-4.8.1-5.fc34.x86_64 alternatives-1.14-3.fc33.x86_64 redhat-rpm-config-177-1.fc34.noarch libpsl-0.21.1-2.fc33.x86_64 openldap-2.4.55-1.fc34.x86_64 libsepol-3.1-4.fc34.x86_64 cyrus-sasl-lib-2.1.27-6.fc33.x86_64 libcurl-7.73.0-2.fc34.x86_64 fonts-srpm-macros-2.0.5-4.fc33.noarch gpg-pubkey-9570ff31-5e3006fb util-linux-2.36-3.fc34.x86_64 libsmartcols-2.36-3.fc34.x86_64 libmount-2.36-3.fc34.x86_64 xz-5.2.5-3.fc33.x86_64 sqlite-libs-3.33.0-2.fc34.x86_64 coreutils-8.32-14.fc34.x86_64 libblkid-2.36-3.fc34.x86_64 basesystem-11-10.fc33.noarch pkgconf-m4-1.7.3-5.fc34.noarch libacl-2.2.53-9.fc34.x86_64 elfutils-debuginfod-client-0.182-1.fc34.x86_64 libgcc-10.2.1-7.fc34.x86_64 libcap-ng-0.8-1.fc34.x86_64 glibc-2.32.9000-14.fc34.x86_64 libssh-config-0.9.5-1.fc34.noarch file-5.39-3.fc34.x86_64 which-2.21-20.fc33.x86_64 elfutils-libelf-0.182-1.fc34.x86_64 pcre2-syntax-10.35-8.fc34.noarch libarchive-3.4.3-3.fc33.x86_64 python-srpm-macros-3.9-10.fc34.noarch libidn2-2.3.0-4.fc33.x86_64 tar-1.32-6.fc33.x86_64 glibc-minimal-langpack-2.32.9000-14.fc34.x86_64 rpm-libs-4.16.0-3.fc34.x86_64 zlib-1.2.11-22.fc33.x86_64 fedora-repos-34-0.8.noarch qt5-srpm-macros-5.15.1-1.fc34.noarch cpio-2.13-8.fc33.x86_64 rpm-4.16.0-3.fc34.x86_64 curl-7.73.0-2.fc34.x86_64 libssh-0.9.5-1.fc34.x86_64 pkgconf-pkg-config-1.7.3-5.fc34.x86_64 glibc-common-2.32.9000-14.fc34.x86_64 Start: buildsrpm Start: rpmbuild -bs sh: perl: command not found warning: Macro expanded in comment on line 18: %(echo %{version} | tr '.' '-').tar.gz sh: /usr/bin/perl: No such file or directory Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1604793600 Wrote: /builddir/build/SRPMS/openbabel-3.1.1-4.20201103git9c001b5.fc34.src.rpm Finish: rpmbuild -bs INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-x86_64-1605003826.047499/root/var/log/dnf.rpm.log /var/lib/mock/fedora-rawhide-x86_64-1605003826.047499/root/var/log/dnf.librepo.log /var/lib/mock/fedora-rawhide-x86_64-1605003826.047499/root/var/log/dnf.log Finish: buildsrpm INFO: Done(/tmp/copr-rpmbuild-dgqhxivh/openbabel.spec) Config(child) 1 minutes 35 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run INFO: unmounting tmpfs. Running (timeout=108000): unbuffer mock --rebuild /var/lib/copr-rpmbuild/results/openbabel-3.1.1-4.20201103git9c001b5.fc34.src.rpm --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1605003922.803347 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 2.6 starting (python version = 3.9.0)... Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/results/openbabel-3.1.1-4.20201103git9c001b5.fc34.src.rpm) Config(fedora-rawhide-x86_64) Start: clean chroot Finish: clean chroot Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1605003922.803347/root. INFO: calling preinit hooks INFO: enabled root cache Start(bootstrap): unpacking root cache Finish(bootstrap): unpacking root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: enabled HW Info plugin Mock Version: 2.6 INFO: Mock Version: 2.6 Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-1605003922.803347/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin Mock Version: 2.6 INFO: Mock Version: 2.6 Start: dnf update No matches found for the following disable plugin patterns: local, spacewalk Copr repository 64 kB/s | 3.3 kB 00:00 fedora 60 kB/s | 11 kB 00:00 Dependencies resolved. Nothing to do. Complete! Finish: dnf update Finish: chroot init Start: build phase for openbabel-3.1.1-4.20201103git9c001b5.fc34.src.rpm Start: build setup for openbabel-3.1.1-4.20201103git9c001b5.fc34.src.rpm sh: perl: command not found warning: Macro expanded in comment on line 18: %(echo %{version} | tr '.' '-').tar.gz sh: /usr/bin/perl: No such file or directory Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1604793600 Wrote: /builddir/build/SRPMS/openbabel-3.1.1-4.20201103git9c001b5.fc34.src.rpm No matches found for the following disable plugin patterns: local, spacewalk Copr repository 160 kB/s | 3.3 kB 00:00 fedora 218 kB/s | 11 kB 00:00 Dependencies resolved. ================================================================================================ Package Arch Version Repo Size ================================================================================================ Installing: [1mImageMagick [m x86_64 1:6.9.11.27-1.fc33 fedora 162 k [1mcmake [m x86_64 3.18.3-1.fc34 fedora 5.3 M [1mdesktop-file-utils [m x86_64 0.26-2.fc33 fedora 74 k [1mdos2unix [m x86_64 7.4.2-1.fc34 fedora 235 k [1meigen3-devel [m noarch 3.3.8-2.fc34 fedora 885 k [1mgcc-c++ [m x86_64 10.2.1-7.fc34 fedora 11 M [1minchi-devel [m x86_64 1.0.5-10.fc33 fedora 23 k [1mlibxml2-devel [m x86_64 2.9.10-7.fc34 fedora 852 k [1mperl-devel [m x86_64 4:5.32.0-465.fc34 fedora 676 k [1mperl-generators [m noarch 1.11-9.fc33 fedora 16 k [1mpython3-devel [m x86_64 3.9.0-1.fc34 fedora 205 k [1mrapidjson-devel [m x86_64 1.1.0-15.fc34 fedora 109 k [1mruby-devel [m x86_64 2.7.2-135.fc34 fedora 199 k [1mswig [m x86_64 4.0.2-3.fc34 fedora 1.4 M [1mwxGTK3-devel [m x86_64 3.0.5.1-2.fc33 fedora 32 k Installing dependencies: [1mImageMagick-libs [m x86_64 1:6.9.11.27-1.fc33 fedora 2.3 M [1mLibRaw [m x86_64 0.20.2-1.fc34 fedora 381 k [1mOpenEXR-libs [m x86_64 2.3.0-6.fc33 fedora 807 k [1mSDL2 [m x86_64 2.0.12-4.fc33 fedora 499 k [1macl [m x86_64 2.2.53-9.fc34 fedora 72 k [1madobe-mappings-cmap [m noarch 20171205-9.fc33 fedora 1.9 M [1madobe-mappings-cmap-deprecated [m noarch 20171205-9.fc33 fedora 109 k [1madobe-mappings-pdf [m noarch 20180407-7.fc33 fedora 668 k [1madwaita-cursor-theme [m noarch 3.38.0-1.fc34 fedora 623 k [1madwaita-icon-theme [m noarch 3.38.0-1.fc34 fedora 11 M [1malsa-lib [m x86_64 1.2.4-4.fc34 fedora 475 k [1mannobin [m x86_64 9.38-1.fc34 fedora 131 k [1mat-spi2-atk [m x86_64 2.38.0-1.fc34 fedora 90 k [1mat-spi2-atk-devel [m x86_64 2.38.0-1.fc34 fedora 9.9 k [1mat-spi2-core [m x86_64 2.38.0-2.fc34 fedora 172 k [1mat-spi2-core-devel [m x86_64 2.38.0-2.fc34 fedora 130 k [1matk [m x86_64 2.36.0-2.fc33 fedora 273 k [1matk-devel [m x86_64 2.36.0-2.fc33 fedora 174 k [1mavahi-libs [m x86_64 0.8-6.fc34 fedora 67 k [1mbrotli [m x86_64 1.0.9-3.fc34 fedora 324 k [1mbrotli-devel [m x86_64 1.0.9-3.fc34 fedora 32 k [1mbubblewrap [m x86_64 0.4.1-2.fc33 fedora 50 k [1mbzip2-devel [m x86_64 1.0.8-4.fc33 fedora 214 k [1mcairo [m x86_64 1.16.0-9.fc33 fedora 692 k [1mcairo-devel [m x86_64 1.16.0-9.fc33 fedora 240 k [1mcairo-gobject [m x86_64 1.16.0-9.fc33 fedora 18 k [1mcairo-gobject-devel [m x86_64 1.16.0-9.fc33 fedora 10 k [1mcdparanoia-libs [m x86_64 10.2-35.fc34 fedora 54 k [1mcmake-data [m noarch 3.18.3-1.fc34 fedora 1.5 M [1mcmake-filesystem [m x86_64 3.18.3-1.fc34 fedora 16 k [1mcmake-rpm-macros [m noarch 3.18.3-1.fc34 fedora 15 k [1mcolord-libs [m x86_64 1.4.5-1.fc34 fedora 240 k [1mcpp [m x86_64 10.2.1-7.fc34 fedora 9.4 M [1mcryptsetup-libs [m x86_64 2.3.4-1.fc34 fedora 476 k [1mcups-libs [m x86_64 1:2.3.3-17.fc34 fedora 274 k [1mdbus [m x86_64 1:1.12.20-2.fc33 fedora 9.9 k [1mdbus-broker [m x86_64 24-1.fc34 fedora 170 k [1mdbus-common [m noarch 1:1.12.20-2.fc33 fedora 17 k [1mdbus-devel [m x86_64 1:1.12.20-2.fc33 fedora 36 k [1mdbus-libs [m x86_64 1:1.12.20-2.fc33 fedora 154 k [1mdejavu-sans-fonts [m noarch 2.37-15.fc34 fedora 1.3 M [1mdevice-mapper [m x86_64 1.02.173-1.fc33 fedora 142 k [1mdevice-mapper-libs [m x86_64 1.02.173-1.fc33 fedora 178 k [1memacs-filesystem [m noarch 1:27.1-2.fc34 fedora 8.2 k [1menchant2 [m x86_64 2.2.13-1.fc34 fedora 63 k [1mfftw-libs-double [m x86_64 3.3.8-9.fc34 fedora 940 k [1mfontconfig [m x86_64 2.13.92-12.fc33 fedora 268 k [1mfontconfig-devel [m x86_64 2.13.92-12.fc33 fedora 129 k [1mfonts-filesystem [m noarch 1:2.0.5-4.fc33 fedora 8.7 k [1mfreetype [m x86_64 2.10.4-1.fc34 fedora 391 k [1mfreetype-devel [m x86_64 2.10.4-1.fc34 fedora 1.1 M [1mfribidi [m x86_64 1.0.10-3.fc33 fedora 86 k [1mfribidi-devel [m x86_64 1.0.10-3.fc33 fedora 25 k [1mgcc [m x86_64 10.2.1-7.fc34 fedora 30 M [1mgd [m x86_64 2.3.0-3.fc33 fedora 137 k [1mgdbm-libs [m x86_64 1:1.18.1-5.fc33 fedora 54 k [1mgdk-pixbuf2 [m x86_64 2.40.0-3.fc33 fedora 463 k [1mgdk-pixbuf2-devel [m x86_64 2.40.0-3.fc33 fedora 213 k [1mgdk-pixbuf2-modules [m x86_64 2.40.0-3.fc33 fedora 98 k [1mgettext [m x86_64 0.21-3.fc34 fedora 1.1 M [1mgettext-libs [m x86_64 0.21-3.fc34 fedora 308 k [1mgl-manpages [m noarch 1.1-21.20190306.fc33 fedora 1.0 M [1mglib-networking [m x86_64 2.66.0-1.fc34 fedora 161 k [1mglib2 [m x86_64 2.67.0-2.fc34 fedora 2.7 M [1mglib2-devel [m x86_64 2.67.0-2.fc34 fedora 469 k [1mglibc-devel [m x86_64 2.32.9000-14.fc34 fedora 1.1 M [1mglibc-headers-x86 [m noarch 2.32.9000-14.fc34 fedora 498 k 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20200910-1.fc34 fedora 77 k [1murw-base35-fonts [m noarch 20200910-1.fc34 fedora 9.6 k [1murw-base35-fonts-common [m noarch 20200910-1.fc34 fedora 20 k [1murw-base35-gothic-fonts [m noarch 20200910-1.fc34 fedora 652 k [1murw-base35-nimbus-mono-ps-fonts [m noarch 20200910-1.fc34 fedora 802 k [1murw-base35-nimbus-roman-fonts [m noarch 20200910-1.fc34 fedora 865 k [1murw-base35-nimbus-sans-fonts [m noarch 20200910-1.fc34 fedora 1.3 M [1murw-base35-p052-fonts [m noarch 20200910-1.fc34 fedora 983 k [1murw-base35-standard-symbols-ps-fonts [m noarch 20200910-1.fc34 fedora 42 k [1murw-base35-z003-fonts [m noarch 20200910-1.fc34 fedora 279 k [1mvim-filesystem [m noarch 2:8.2.1961-1.fc34 fedora 22 k [1mwayland-devel [m x86_64 1.18.0-2.fc33 fedora 132 k [1mwayland-protocols-devel [m noarch 1.20-2.fc33 fedora 74 k [1mwebkit2gtk3 [m x86_64 2.30.2-1.fc34 fedora 16 M [1mwebkit2gtk3-jsc [m x86_64 2.30.2-1.fc34 fedora 6.2 M [1mwoff2 [m x86_64 1.0.2-9.fc33 fedora 60 k [1mwpebackend-fdo [m x86_64 1.8.0-1.fc34 fedora 41 k [1mwxBase3 [m x86_64 3.0.5.1-2.fc33 fedora 979 k [1mwxBase3-devel [m x86_64 3.0.5.1-2.fc33 fedora 1.1 M [1mwxGTK3 [m x86_64 3.0.5.1-2.fc33 fedora 4.4 M [1mwxGTK3-gl [m x86_64 3.0.5.1-2.fc33 fedora 38 k [1mwxGTK3-i18n [m noarch 3.0.5.1-2.fc33 fedora 528 k [1mwxGTK3-media [m x86_64 3.0.5.1-2.fc33 fedora 54 k [1mwxGTK3-webview [m x86_64 3.0.5.1-2.fc33 fedora 60 k [1mxdg-dbus-proxy [m x86_64 0.1.2-3.fc33 fedora 43 k [1mxkeyboard-config [m noarch 2.31-2.fc34 fedora 750 k [1mxml-common [m noarch 0.6.3-55.fc33 fedora 31 k [1mxorg-x11-font-utils [m x86_64 1:7.5-46.fc34 fedora 100 k [1mxorg-x11-fonts-ISO8859-1-100dpi [m noarch 7.5-26.fc34 fedora 1.0 M [1mxorg-x11-proto-devel [m noarch 2019.1-5.fc34 fedora 261 k [1mxorg-x11-server-utils [m x86_64 7.7-37.fc34 fedora 190 k [1mxz-devel [m x86_64 5.2.5-3.fc33 fedora 52 k [1mzlib-devel [m x86_64 1.2.11-22.fc33 fedora 44 k Transaction Summary ================================================================================================ Install 382 Packages Total download size: 232 M Installed size: 815 M Downloading Packages: (1/382): ImageMagick-libs-6.9.11.27-1.fc33.x86_ 47 MB/s | 2.3 MB 00:00 (2/382): ImageMagick-6.9.11.27-1.fc33.x86_64.rp 3.1 MB/s | 162 kB 00:00 (3/382): LibRaw-0.20.2-1.fc34.x86_64.rpm 6.5 MB/s | 381 kB 00:00 (4/382): OpenEXR-libs-2.3.0-6.fc33.x86_64.rpm 52 MB/s | 807 kB 00:00 (5/382): acl-2.2.53-9.fc34.x86_64.rpm 7.8 MB/s | 72 kB 00:00 (6/382): SDL2-2.0.12-4.fc33.x86_64.rpm 27 MB/s | 499 kB 00:00 (7/382): adobe-mappings-cmap-deprecated-2017120 9.3 MB/s | 109 kB 00:00 (8/382): adobe-mappings-pdf-20180407-7.fc33.noa 22 MB/s | 668 kB 00:00 (9/382): adobe-mappings-cmap-20171205-9.fc33.no 40 MB/s | 1.9 MB 00:00 (10/382): adwaita-cursor-theme-3.38.0-1.fc34.no 17 MB/s | 623 kB 00:00 (11/382): annobin-9.38-1.fc34.x86_64.rpm 25 MB/s | 131 kB 00:00 (12/382): alsa-lib-1.2.4-4.fc34.x86_64.rpm 39 MB/s | 475 kB 00:00 (13/382): at-spi2-atk-2.38.0-1.fc34.x86_64.rpm 8.7 MB/s | 90 kB 00:00 (14/382): at-spi2-atk-devel-2.38.0-1.fc34.x86_6 833 kB/s | 9.9 kB 00:00 (15/382): at-spi2-core-devel-2.38.0-2.fc34.x86_ 21 MB/s | 130 kB 00:00 (16/382): at-spi2-core-2.38.0-2.fc34.x86_64.rpm 9.9 MB/s | 172 kB 00:00 (17/382): atk-devel-2.36.0-2.fc33.x86_64.rpm 23 MB/s | 174 kB 00:00 (18/382): atk-2.36.0-2.fc33.x86_64.rpm 20 MB/s | 273 kB 00:00 (19/382): avahi-libs-0.8-6.fc34.x86_64.rpm 9.0 MB/s | 67 kB 00:00 (20/382): brotli-1.0.9-3.fc34.x86_64.rpm 34 MB/s | 324 kB 00:00 (21/382): brotli-devel-1.0.9-3.fc34.x86_64.rpm 3.6 MB/s | 32 kB 00:00 (22/382): bzip2-devel-1.0.8-4.fc33.x86_64.rpm 21 MB/s | 214 kB 00:00 (23/382): bubblewrap-0.4.1-2.fc33.x86_64.rpm 3.0 MB/s | 50 kB 00:00 (24/382): cairo-1.16.0-9.fc33.x86_64.rpm 42 MB/s | 692 kB 00:00 (25/382): cairo-devel-1.16.0-9.fc33.x86_64.rpm 11 MB/s | 240 kB 00:00 (26/382): cairo-gobject-1.16.0-9.fc33.x86_64.rp 1.7 MB/s | 18 kB 00:00 (27/382): cairo-gobject-devel-1.16.0-9.fc33.x86 1.7 MB/s | 10 kB 00:00 (28/382): cdparanoia-libs-10.2-35.fc34.x86_64.r 7.4 MB/s | 54 kB 00:00 (29/382): adwaita-icon-theme-3.38.0-1.fc34.noar 54 MB/s | 11 MB 00:00 (30/382): cmake-data-3.18.3-1.fc34.noarch.rpm 20 MB/s | 1.5 MB 00:00 (31/382): cmake-3.18.3-1.fc34.x86_64.rpm 52 MB/s | 5.3 MB 00:00 (32/382): cmake-filesystem-3.18.3-1.fc34.x86_64 485 kB/s | 16 kB 00:00 (33/382): cmake-rpm-macros-3.18.3-1.fc34.noarch 663 kB/s | 15 kB 00:00 (34/382): cryptsetup-libs-2.3.4-1.fc34.x86_64.r 46 MB/s | 476 kB 00:00 (35/382): colord-libs-1.4.5-1.fc34.x86_64.rpm 9.9 MB/s | 240 kB 00:00 (36/382): cups-libs-2.3.3-17.fc34.x86_64.rpm 19 MB/s | 274 kB 00:00 (37/382): dbus-1.12.20-2.fc33.x86_64.rpm 2.0 MB/s | 9.9 kB 00:00 (38/382): dbus-common-1.12.20-2.fc33.noarch.rpm 3.9 MB/s | 17 kB 00:00 (39/382): dbus-broker-24-1.fc34.x86_64.rpm 21 MB/s | 170 kB 00:00 (40/382): dbus-devel-1.12.20-2.fc33.x86_64.rpm 6.6 MB/s | 36 kB 00:00 (41/382): dbus-libs-1.12.20-2.fc33.x86_64.rpm 17 MB/s | 154 kB 00:00 (42/382): dejavu-sans-fonts-2.37-15.fc34.noarch 63 MB/s | 1.3 MB 00:00 (43/382): desktop-file-utils-0.26-2.fc33.x86_64 4.0 MB/s | 74 kB 00:00 (44/382): device-mapper-1.02.173-1.fc33.x86_64. 14 MB/s | 142 kB 00:00 (45/382): device-mapper-libs-1.02.173-1.fc33.x8 22 MB/s | 178 kB 00:00 (46/382): dos2unix-7.4.2-1.fc34.x86_64.rpm 18 MB/s | 235 kB 00:00 (47/382): emacs-filesystem-27.1-2.fc34.noarch.r 2.1 MB/s | 8.2 kB 00:00 (48/382): cpp-10.2.1-7.fc34.x86_64.rpm 67 MB/s | 9.4 MB 00:00 (49/382): enchant2-2.2.13-1.fc34.x86_64.rpm 1.4 MB/s | 63 kB 00:00 (50/382): eigen3-devel-3.3.8-2.fc34.noarch.rpm 13 MB/s | 885 kB 00:00 (51/382): fontconfig-2.13.92-12.fc33.x86_64.rpm 25 MB/s | 268 kB 00:00 (52/382): fontconfig-devel-2.13.92-12.fc33.x86_ 16 MB/s | 129 kB 00:00 (53/382): freetype-2.10.4-1.fc34.x86_64.rpm 31 MB/s | 391 kB 00:00 (54/382): fftw-libs-double-3.3.8-9.fc34.x86_64. 21 MB/s | 940 kB 00:00 (55/382): freetype-devel-2.10.4-1.fc34.x86_64.r 56 MB/s | 1.1 MB 00:00 (56/382): fribidi-devel-1.0.10-3.fc33.x86_64.rp 4.2 MB/s | 25 kB 00:00 (57/382): fribidi-1.0.10-3.fc33.x86_64.rpm 11 MB/s | 86 kB 00:00 (58/382): fonts-filesystem-2.0.5-4.fc33.noarch. 108 kB/s | 8.7 kB 00:00 (59/382): gd-2.3.0-3.fc33.x86_64.rpm 8.5 MB/s | 137 kB 00:00 (60/382): gdbm-libs-1.18.1-5.fc33.x86_64.rpm 6.3 MB/s | 54 kB 00:00 (61/382): gdk-pixbuf2-2.40.0-3.fc33.x86_64.rpm 21 MB/s | 463 kB 00:00 (62/382): gdk-pixbuf2-devel-2.40.0-3.fc33.x86_6 9.3 MB/s | 213 kB 00:00 (63/382): gdk-pixbuf2-modules-2.40.0-3.fc33.x86 5.0 MB/s | 98 kB 00:00 (64/382): gettext-0.21-3.fc34.x86_64.rpm 17 MB/s | 1.1 MB 00:00 (65/382): gettext-libs-0.21-3.fc34.x86_64.rpm 7.1 MB/s | 308 kB 00:00 (66/382): gcc-c++-10.2.1-7.fc34.x86_64.rpm 36 MB/s | 11 MB 00:00 (67/382): gl-manpages-1.1-21.20190306.fc33.noar 12 MB/s | 1.0 MB 00:00 (68/382): glib-networking-2.66.0-1.fc34.x86_64. 4.3 MB/s | 161 kB 00:00 (69/382): gcc-10.2.1-7.fc34.x86_64.rpm 63 MB/s | 30 MB 00:00 (70/382): glib2-devel-2.67.0-2.fc34.x86_64.rpm 3.6 MB/s | 469 kB 00:00 (71/382): glib2-2.67.0-2.fc34.x86_64.rpm 16 MB/s | 2.7 MB 00:00 (72/382): glibc-devel-2.32.9000-14.fc34.x86_64. 32 MB/s | 1.1 MB 00:00 (73/382): glibc-headers-x86-2.32.9000-14.fc34.n 19 MB/s | 498 kB 00:00 (74/382): gnutls-3.6.15-2.fc34.x86_64.rpm 60 MB/s | 925 kB 00:00 (75/382): graphene-1.10.2-5.fc34.x86_64.rpm 10 MB/s | 65 kB 00:00 (76/382): graphite2-1.3.14-6.fc34.x86_64.rpm 13 MB/s | 95 kB 00:00 (77/382): graphite2-devel-1.3.14-6.fc34.x86_64. 2.7 MB/s | 21 kB 00:00 (78/382): groff-base-1.22.4-4.fc34.x86_64.rpm 47 MB/s | 1.1 MB 00:00 (79/382): gsettings-desktop-schemas-3.38.0-1.fc 15 MB/s | 681 kB 00:00 (80/382): google-droid-sans-fonts-20200215-8.fc 24 MB/s | 2.7 MB 00:00 (81/382): graphviz-2.44.0-14.fc34.x86_64.rpm 28 MB/s | 3.4 MB 00:00 (82/382): gstreamer1-1.18.1-1.fc34.x86_64.rpm 22 MB/s | 1.4 MB 00:00 (83/382): gtk-update-icon-cache-3.24.23-1.fc34. 1.7 MB/s | 33 kB 00:00 (84/382): gstreamer1-plugins-base-1.18.1-1.fc34 39 MB/s | 2.1 MB 00:00 (85/382): gtk2-2.24.32-8.fc33.x86_64.rpm 46 MB/s | 3.5 MB 00:00 (86/382): gtk3-3.24.23-1.fc34.x86_64.rpm 37 MB/s | 4.7 MB 00:00 (87/382): gts-0.7.6-38.20121130.fc33.x86_64.rpm 3.9 MB/s | 237 kB 00:00 (88/382): gtk3-devel-3.24.23-1.fc34.x86_64.rpm 31 MB/s | 4.3 MB 00:00 (89/382): harfbuzz-2.7.2-1.fc34.x86_64.rpm 21 MB/s | 634 kB 00:00 (90/382): harfbuzz-devel-2.7.2-1.fc34.x86_64.rp 10 MB/s | 272 kB 00:00 (91/382): harfbuzz-icu-2.7.2-1.fc34.x86_64.rpm 2.3 MB/s | 15 kB 00:00 (92/382): hicolor-icon-theme-0.17-9.fc33.noarch 6.0 MB/s | 44 kB 00:00 (93/382): hunspell-1.7.0-7.fc33.x86_64.rpm 31 MB/s | 329 kB 00:00 (94/382): hunspell-en-US-0.20140811.1-17.fc33.n 16 MB/s | 176 kB 00:00 (95/382): hyphen-2.8.8-14.fc33.x86_64.rpm 4.7 MB/s | 29 kB 00:00 (96/382): ilmbase-2.3.0-5.fc33.x86_64.rpm 16 MB/s | 134 kB 00:00 (97/382): inchi-devel-1.0.5-10.fc33.x86_64.rpm 1.6 MB/s | 23 kB 00:00 (98/382): inchi-libs-1.0.5-10.fc33.x86_64.rpm 23 MB/s | 542 kB 00:00 (99/382): iptables-libs-1.8.6-1.fc34.x86_64.rpm 29 MB/s | 367 kB 00:00 (100/382): hwdata-0.340-1.fc34.noarch.rpm 26 MB/s | 1.4 MB 00:00 (101/382): isl-0.16.1-12.fc33.x86_64.rpm 20 MB/s | 876 kB 00:00 (102/382): jasper-libs-2.0.22-1.fc34.x86_64.rpm 6.0 MB/s | 152 kB 00:00 (103/382): jbigkit-libs-2.1-20.fc34.x86_64.rpm 5.8 MB/s | 52 kB 00:00 (104/382): jbig2dec-libs-0.19-2.fc34.x86_64.rpm 4.7 MB/s | 74 kB 00:00 (105/382): json-c-0.14-7.fc33.x86_64.rpm 12 MB/s | 41 kB 00:00 (106/382): iso-codes-4.5.0-2.fc33.noarch.rpm 48 MB/s | 3.4 MB 00:00 (107/382): json-glib-1.6.0-1.fc34.x86_64.rpm 8.6 MB/s | 150 kB 00:00 (108/382): jsoncpp-1.9.4-2.fc34.x86_64.rpm 5.5 MB/s | 96 kB 00:00 (109/382): langpacks-core-font-en-3.0-5.fc34.no 1.6 MB/s | 9.7 kB 00:00 (110/382): kmod-libs-27-3.fc33.x86_64.rpm 6.8 MB/s | 63 kB 00:00 (111/382): kernel-headers-5.10.0-0.rc2.git0.1.f 54 MB/s | 1.2 MB 00:00 (112/382): lcms2-2.11-2.fc33.x86_64.rpm 13 MB/s | 169 kB 00:00 (113/382): lasi-1.1.3-4.fc33.x86_64.rpm 3.4 MB/s | 56 kB 00:00 (114/382): libICE-1.0.10-4.fc33.x86_64.rpm 15 MB/s | 71 kB 00:00 (115/382): libSM-1.2.3-6.fc33.x86_64.rpm 4.6 MB/s | 42 kB 00:00 (116/382): libX11-1.6.12-3.fc34.x86_64.rpm 51 MB/s | 660 kB 00:00 (117/382): libX11-common-1.6.12-3.fc34.noarch.r 13 MB/s | 153 kB 00:00 (118/382): libXau-1.0.9-5.fc34.x86_64.rpm 6.0 MB/s | 31 kB 00:00 (119/382): libX11-xcb-1.6.12-3.fc34.x86_64.rpm 1.6 MB/s | 11 kB 00:00 (120/382): libXau-devel-1.0.9-5.fc34.x86_64.rpm 3.0 MB/s | 13 kB 00:00 (121/382): libXcomposite-0.4.5-4.fc34.x86_64.rp 4.8 MB/s | 23 kB 00:00 (122/382): libX11-devel-1.6.12-3.fc34.x86_64.rp 33 MB/s | 941 kB 00:00 (123/382): libXaw-1.0.13-16.fc34.x86_64.rpm 11 MB/s | 202 kB 00:00 (124/382): libXcomposite-devel-0.4.5-4.fc34.x86 1.4 MB/s | 16 kB 00:00 (125/382): libXcursor-1.2.0-4.fc34.x86_64.rpm 5.3 MB/s | 29 kB 00:00 (126/382): libXdamage-1.1.5-4.fc34.x86_64.rpm 3.8 MB/s | 22 kB 00:00 (127/382): libXdamage-devel-1.1.5-4.fc34.x86_64 1.7 MB/s | 9.2 kB 00:00 (128/382): libXcursor-devel-1.2.0-4.fc34.x86_64 1.9 MB/s | 22 kB 00:00 (129/382): libXext-devel-1.3.4-5.fc34.x86_64.rp 14 MB/s | 73 kB 00:00 (130/382): libXext-1.3.4-5.fc34.x86_64.rpm 5.1 MB/s | 39 kB 00:00 (131/382): libXfixes-5.0.3-13.fc34.x86_64.rpm 2.7 MB/s | 19 kB 00:00 (132/382): libXfixes-devel-5.0.3-13.fc34.x86_64 2.2 MB/s | 12 kB 00:00 (133/382): libXft-devel-2.3.3-5.fc34.x86_64.rpm 4.2 MB/s | 18 kB 00:00 (134/382): libXi-1.7.10-5.fc34.x86_64.rpm 5.0 MB/s | 38 kB 00:00 (135/382): libXft-2.3.3-5.fc34.x86_64.rpm 4.1 MB/s | 63 kB 00:00 (136/382): libXi-devel-1.7.10-5.fc34.x86_64.rpm 7.9 MB/s | 100 kB 00:00 (137/382): libXmu-1.1.3-5.fc34.x86_64.rpm 13 MB/s | 76 kB 00:00 (138/382): libXinerama-1.1.4-7.fc34.x86_64.rpm 1.0 MB/s | 14 kB 00:00 (139/382): libXinerama-devel-1.1.4-7.fc34.x86_6 1.0 MB/s | 13 kB 00:00 (140/382): libXpm-3.5.13-3.fc33.x86_64.rpm 9.6 MB/s | 59 kB 00:00 (141/382): libXrandr-devel-1.5.2-5.fc34.x86_64. 3.4 MB/s | 19 kB 00:00 (142/382): libXrandr-1.5.2-5.fc34.x86_64.rpm 2.2 MB/s | 27 kB 00:00 (143/382): libXrender-0.9.10-13.fc34.x86_64.rpm 3.5 MB/s | 27 kB 00:00 (144/382): libXrender-devel-0.9.10-13.fc34.x86_ 1.6 MB/s | 16 kB 00:00 (145/382): libXtst-1.2.3-12.fc33.x86_64.rpm 3.7 MB/s | 20 kB 00:00 (146/382): libXtst-devel-1.2.3-12.fc33.x86_64.r 3.0 MB/s | 15 kB 00:00 (147/382): libXv-1.0.11-13.fc34.x86_64.rpm 3.1 MB/s | 18 kB 00:00 (148/382): libXt-1.2.0-3.fc34.x86_64.rpm 13 MB/s | 183 kB 00:00 (149/382): libXxf86vm-1.1.4-15.fc34.x86_64.rpm 3.3 MB/s | 18 kB 00:00 (150/382): libblkid-devel-2.36-3.fc34.x86_64.rp 2.4 MB/s | 17 kB 00:00 (151/382): libcbor-0.7.0-2.fc34.x86_64.rpm 12 MB/s | 57 kB 00:00 (152/382): libargon2-20171227-5.fc33.x86_64.rpm 2.5 MB/s | 29 kB 00:00 (153/382): libdatrie-0.2.9-13.fc34.x86_64.rpm 5.1 MB/s | 31 kB 00:00 (154/382): libdatrie-devel-0.2.9-13.fc34.x86_64 17 MB/s | 127 kB 00:00 (155/382): libdrm-2.4.103-1.fc34.x86_64.rpm 21 MB/s | 160 kB 00:00 (156/382): libepoxy-devel-1.5.4-3.fc33.x86_64.r 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Finish: build setup for openbabel-3.1.1-4.20201103git9c001b5.fc34.src.rpm Start: rpmbuild openbabel-3.1.1-4.20201103git9c001b5.fc34.src.rpm warning: Macro expanded in comment on line 18: %(echo %{version} | tr '.' 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root/root 907 2020-11-02 21:18 openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools/obfragment-index.cpp -rw-rw-r-- root/root 6362 2020-11-02 21:18 openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools/obfragment.cpp -rw-rw-r-- root/root 4244 2020-11-02 21:18 openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools/obgen.cpp -rw-rw-r-- root/root 10787 2020-11-02 21:18 openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools/obgrep.cpp -rw-rw-r-- root/root 8817 2020-11-02 21:18 openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools/obminimize.cpp -rw-rw-r-- root/root 12987 2020-11-02 21:18 openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools/obmm.cpp -rw-rw-r-- root/root 4567 2020-11-02 21:18 openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools/obprobe.cpp -rw-rw-r-- root/root 8085 2020-11-02 21:18 openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools/obprop.cpp -rw-rw-r-- root/root 9896 2020-11-02 21:18 openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools/obrms.cpp -rw-rw-r-- root/root 3231 2020-11-02 21:18 openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools/obrotamer.cpp -rw-rw-r-- root/root 8900 2020-11-02 21:18 openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools/obrotate.cpp -rw-rw-r-- root/root 3125 2020-11-02 21:18 openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools/obseq.cpp -rw-rw-r-- root/root 4693 2020-11-02 21:18 openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools/obsort-fragment.cpp -rw-rw-r-- root/root 36802 2020-11-02 21:18 openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools/obspectrophore.cpp -rw-rw-r-- root/root 2312 2020-11-02 21:18 openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools/obsym.cpp -rw-rw-r-- root/root 2514 2020-11-02 21:18 openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools/obtautomer.cpp -rw-rw-r-- root/root 8277 2020-11-02 21:18 openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools/obthermo.cpp -rw-rw-r-- root/root 2679 2020-11-02 21:18 openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools/obtorsion.cpp -rw-rw-r-- root/root 5004 2020-11-02 21:18 openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools/obxyz.cpp -rw-rw-r-- root/root 1647 2020-11-02 21:18 openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools/svgdepict.cpp + STATUS=0 + '[' 0 -ne 0 ']' + cd openbabel-9c001b5aeb8b985f26d111d811673150607662fa + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + echo 'Patch #1 (01.openbabel-perl.patch):' Patch #1 (01.openbabel-perl.patch): + /usr/bin/patch --no-backup-if-mismatch -p1 -b --suffix .perl_path --fuzz=0 patching file scripts/CMakeLists.txt Patch #2 (02.openbabel-ruby.patch): + echo 'Patch #2 (02.openbabel-ruby.patch):' + /usr/bin/patch --no-backup-if-mismatch -p1 -b --suffix .ruby_vendor-swig --fuzz=0 patching file scripts/CMakeLists.txt + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.EZ3Jgv + umask 022 + cd /builddir/build/BUILD + cd openbabel-9c001b5aeb8b985f26d111d811673150607662fa + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules' + export FCFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + /usr/bin/cmake -S . -B x86_64-redhat-linux-gnu -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -DCMAKE_INSTALL_PREFIX=/usr -DBUILD_GUI=ON -DOPENBABEL_USE_SYSTEM_INCHI=true -DRUN_SWIG=ON -DPYTHON_BINDINGS=ON -DPERL_BINDINGS=ON -DRUBY_BINDINGS=ON -R_BINDINGS=ON . -- The C compiler identification is GNU 10.2.1 -- The CXX compiler identification is GNU 10.2.1 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done CMake Deprecation Warning at CMakeLists.txt:14 (cmake_policy): The OLD behavior for policy CMP0042 will be removed from a future version of CMake. The cmake-policies(7) manual explains that the OLD behaviors of all policies are deprecated and that a policy should be set to OLD only under specific short-term circumstances. Projects should be ported to the NEW behavior and not rely on setting a policy to OLD. CMake Warning (dev) at /usr/share/cmake/Modules/FindPackageHandleStandardArgs.cmake:273 (message): The package name passed to `find_package_handle_standard_args` (INCHI) does not match the name of the calling package (Inchi). This can lead to problems in calling code that expects `find_package` result variables (e.g., `_FOUND`) to follow a certain pattern. Call Stack (most recent call first): cmake/modules/FindInchi.cmake:19 (find_package_handle_standard_args) CMakeLists.txt:145 (find_package) This warning is for project developers. Use -Wno-dev to suppress it. -- Found INCHI: /usr/lib64/libinchi.so -- Found LibXml2: /usr/lib64/libxml2.so (found version "2.9.10") -- Found ZLIB: /usr/lib64/libz.so (found version "1.2.11") -- Found wxWidgets: -pthread;;;-lwx_baseu-3.0;-lwx_gtk3u_core-3.0;-lwx_gtk3u_adv-3.0 (found version "3.0.5") -- Looking for conio.h -- Looking for conio.h - not found -- Looking for sys/time.h -- Looking for sys/time.h - found -- Looking for time.h -- Looking for time.h - found -- Looking for strings.h -- Looking for strings.h - found -- Looking for rpc/xdr.h -- Looking for rpc/xdr.h - not found -- Looking for regex.h -- Looking for regex.h - found -- Looking for C++ include sstream -- Looking for C++ include sstream - found -- Looking for rint -- Looking for rint - not found -- Looking for snprintf -- Looking for snprintf - found -- Looking for sranddev -- Looking for sranddev - not found -- Looking for strcasecmp -- Looking for strcasecmp - found -- Looking for strncasecmp -- Looking for strncasecmp - found -- Looking for dlopen in dl -- Looking for dlopen in dl - found -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of clock_t -- Check size of clock_t - done -- Performing Test SCANDIR_NEEDS_CONST -- Performing Test SCANDIR_NEEDS_CONST - Failed -- Performing Test HAVE_GCC_VISIBILITY -- Performing Test HAVE_GCC_VISIBILITY - Success -- Checking available shared pointer... -- Performing Test HAVE_STD_SHARED_PTR -- Performing Test HAVE_STD_SHARED_PTR - Success -- Performing Test HAVE_STD_TR1_SHARED_PTR -- Performing Test HAVE_STD_TR1_SHARED_PTR - Failed -- Performing Test HAVE_STD_TR1_SHARED_PTR_IN_TR1_HEADER -- Performing Test HAVE_STD_TR1_SHARED_PTR_IN_TR1_HEADER - Success -- Use std::shared_ptr in memory -- Could NOT find Boost (missing: Boost_INCLUDE_DIR program_options iostreams) -- Found Eigen3: /usr/include/eigen3 (Required is at least version "2.91.0") -- Could NOT find Boost (missing: Boost_INCLUDE_DIR filesystem iostreams unit_test_framework) -- Maestro formats will NOT be supported. Please install Boost to enable Maestro formats. -- Coordinate generation with Coordgen will NOT be supported. Please install Boost to enable Maestro formats. -- Found PkgConfig: /usr/bin/pkg-config (found version "1.7.3") -- Found RapidJSON: /usr/include (found suitable version "1.1.0", minimum required is "1.1.0") -- JSON formats will be supported. Using RapidJSON 1.1.0 at /usr/include -- Checking for module 'cairo' -- Found cairo, version 1.16.0 -- Found Cairo: /usr/lib64/libcairo.so -- Cairo found. PNG output will be supported. -- Could NOT find Boost (missing: Boost_INCLUDE_DIR system) (Required is at least version "1.45.0") -- Looking for pthread.h -- Looking for pthread.h - found -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Failed -- Check if compiler accepts -pthread -- Check if compiler accepts -pthread - yes -- Found Threads: TRUE -- Could NOT find Boost (missing: Boost_INCLUDE_DIR program_options iostreams) -- Looking for getopt -- Looking for getopt - found -- Attempting to build the GUI -- wxWidgets found => GUI will be built -- Found PythonInterp: /usr/bin/python3.9 (found version "3.9") -- Found SWIG: /usr/bin/swig (found version "4.0.2") -- Found SWIG: /usr/bin/swig (found suitable version "4.0.2", minimum required is "2.0") -- Found PythonLibs: /usr/lib64/libpython3.9.so (found version "3.9.0") -- Python bindings will be compiled -- Found Perl: /usr/bin/perl (found version "5.32.0") -- Found PerlLibs: /usr/lib64/libperl.so (found version "5.32.0") -- Perl bindings will be compiled -- Found Ruby: /usr/bin/ruby (found suitable version "2.7.2", minimum required is "1.8.0") -- Ruby bindings will be compiled -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_C_FLAGS_RELEASE CMAKE_Fortran_FLAGS_RELEASE INCLUDE_INSTALL_DIR SHARE_INSTALL_PREFIX SYSCONF_INSTALL_DIR -- Build files have been written to: /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu + /usr/bin/cmake --build x86_64-redhat-linux-gnu -j2 --verbose /usr/bin/cmake -S/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa -B/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/CMakeFiles /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu//CMakeFiles/progress.marks /usr/bin/gmake -f CMakeFiles/Makefile2 all gmake[1]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/CMakeFiles/openbabel.dir/build.make src/CMakeFiles/openbabel.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/CMakeFiles/openbabel.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/CMakeFiles/openbabel.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/CMakeFiles/openbabel.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/CMakeFiles/openbabel.dir/depend.internal". Scanning dependencies of target openbabel gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/CMakeFiles/openbabel.dir/build.make src/CMakeFiles/openbabel.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 0%] Building CXX object src/CMakeFiles/openbabel.dir/atom.cpp.o [ 0%] Building CXX object src/CMakeFiles/openbabel.dir/alias.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include 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/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/atom.cpp [ 0%] Building CXX object src/CMakeFiles/openbabel.dir/base.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/openbabel.dir/base.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/base.cpp [ 0%] Building CXX object src/CMakeFiles/openbabel.dir/bitvec.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/openbabel.dir/bitvec.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/bitvec.cpp [ 1%] Building CXX object src/CMakeFiles/openbabel.dir/bond.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/openbabel.dir/bond.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/bond.cpp [ 1%] Building CXX object src/CMakeFiles/openbabel.dir/bondtyper.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/openbabel.dir/bondtyper.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/bondtyper.cpp [ 1%] Building CXX object src/CMakeFiles/openbabel.dir/builder.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/openbabel.dir/builder.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/builder.cpp [ 1%] Building CXX object src/CMakeFiles/openbabel.dir/canon.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/openbabel.dir/canon.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/canon.cpp [ 1%] Building CXX object src/CMakeFiles/openbabel.dir/chains.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/openbabel.dir/chains.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/chains.cpp [ 2%] Building CXX object src/CMakeFiles/openbabel.dir/chargemodel.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/openbabel.dir/chargemodel.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/chargemodel.cpp [ 2%] Building CXX object src/CMakeFiles/openbabel.dir/data.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/openbabel.dir/data.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/data.cpp [ 2%] Building CXX object src/CMakeFiles/openbabel.dir/data_utilities.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/openbabel.dir/data_utilities.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/data_utilities.cpp [ 2%] Building CXX object src/CMakeFiles/openbabel.dir/descriptor.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/openbabel.dir/descriptor.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/descriptor.cpp [ 2%] Building CXX object src/CMakeFiles/openbabel.dir/elements.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/openbabel.dir/elements.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/elements.cpp [ 3%] Building CXX object src/CMakeFiles/openbabel.dir/fingerprint.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/openbabel.dir/fingerprint.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/fingerprint.cpp [ 3%] Building CXX object src/CMakeFiles/openbabel.dir/forcefield.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/openbabel.dir/forcefield.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefield.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefield.cpp: In static member function 'static bool OpenBabel::OBForceField::IgnoreCalculation(int, int)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefield.cpp:391:21: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] 391 | if (_ignoreAtom == a) | ~~~~~~~~~~~~^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefield.cpp:393:21: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] 393 | if (_ignoreAtom == b) | ~~~~~~~~~~~~^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefield.cpp: In static member function 'static bool OpenBabel::OBForceField::IgnoreCalculation(int, int, int)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefield.cpp:403:21: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] 403 | if (_ignoreAtom == b) | ~~~~~~~~~~~~^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefield.cpp: In static member function 'static bool OpenBabel::OBForceField::IgnoreCalculation(int, int, int, int)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefield.cpp:413:21: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] 413 | if (_ignoreAtom == d) | ~~~~~~~~~~~~^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefield.cpp: In member function 'int OpenBabel::OBFFConstraints::GetConstraintType(int) const': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefield.cpp:665:15: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 665 | if (index >= _constraints.size()) | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefield.cpp: In member function 'double OpenBabel::OBFFConstraints::GetConstraintValue(int) const': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefield.cpp:673:15: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 673 | if (index >= _constraints.size()) | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefield.cpp: In member function 'int OpenBabel::OBFFConstraints::GetConstraintAtomA(int) const': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefield.cpp:681:15: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 681 | if (index >= _constraints.size()) | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefield.cpp: In member function 'int OpenBabel::OBFFConstraints::GetConstraintAtomB(int) const': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefield.cpp:689:15: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 689 | if (index >= _constraints.size()) | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefield.cpp: In member function 'int OpenBabel::OBFFConstraints::GetConstraintAtomC(int) const': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefield.cpp:697:15: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 697 | if (index >= _constraints.size()) | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefield.cpp: In member function 'int OpenBabel::OBFFConstraints::GetConstraintAtomD(int) const': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefield.cpp:705:15: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 705 | if (index >= _constraints.size()) | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefield.cpp: In member function 'int OpenBabel::OBForceField::FastRotorSearch(bool)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefield.cpp:1353:34: warning: array subscript has type 'char' [-Wchar-subscripts] 1353 | num_permutations = factorial[num_rotors_to_permute]; | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefield.cpp:1357:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 1357 | for (int i=0; i::size_type' {aka 'long unsigned int'} [-Wsign-compare] 1370 | for (int i=0; i >&, std::vector, double)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefield.cpp:1571:15: warning: comparison of integer expressions of different signedness: 'unsigned int' and '__gnu_cxx::__alloc_traits, int>::value_type' {aka 'int'} [-Wsign-compare] 1571 | if (j == rotorKey[i]) /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefield.cpp:1590:15: warning: comparison of integer expressions of different signedness: 'unsigned int' and '__gnu_cxx::__alloc_traits, int>::value_type' {aka 'int'} [-Wsign-compare] 1590 | if (j == rotorKey[i]) [ 3%] Building CXX object src/CMakeFiles/openbabel.dir/format.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/openbabel.dir/format.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/format.cpp [ 3%] Building CXX object src/CMakeFiles/openbabel.dir/generic.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/openbabel.dir/generic.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/generic.cpp In file included from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefield.cpp:24: /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefield.cpp: In member function 'OpenBabel::OBFFConstraints::AddAtomYConstraint(int)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/forcefield.h:233:16: warning: 'MEM [(double *)&constraint + 16B]' may be used uninitialized in this function [-Wmaybe-uninitialized] 233 | class OBFPRT OBFFConstraint | ^~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefield.cpp: In member function 'OpenBabel::OBFFConstraints::AddDistanceConstraint(int, int, double)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/forcefield.h:233:16: warning: 'MEM [(double *)&constraint + 16B]' may be used uninitialized in this function [-Wmaybe-uninitialized] 233 | class OBFPRT OBFFConstraint | ^~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefield.cpp: In member function 'OpenBabel::OBFFConstraints::AddAngleConstraint(int, int, int, double)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/forcefield.h:233:16: warning: 'MEM [(double *)&constraint + 16B]' may be used uninitialized in this function [-Wmaybe-uninitialized] 233 | class OBFPRT OBFFConstraint | ^~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefield.cpp: In member function 'OpenBabel::OBFFConstraints::AddTorsionConstraint(int, int, int, int, double)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/forcefield.h:233:16: warning: 'MEM [(double *)&constraint + 16B]' may be used uninitialized in this function [-Wmaybe-uninitialized] 233 | class OBFPRT OBFFConstraint | ^~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefield.cpp: In member function 'OpenBabel::OBFFConstraints::AddIgnore(int)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/forcefield.h:233:16: warning: 'MEM [(double *)&constraint + 16B]' may be used uninitialized in this function [-Wmaybe-uninitialized] 233 | class OBFPRT OBFFConstraint | ^~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefield.cpp: In member function 'OpenBabel::OBFFConstraints::AddAtomZConstraint(int)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/forcefield.h:233:16: warning: 'MEM [(double *)&constraint + 16B]' may be used uninitialized in this function [-Wmaybe-uninitialized] 233 | class OBFPRT OBFFConstraint | ^~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefield.cpp: In member function 'OpenBabel::OBFFConstraints::AddAtomXConstraint(int)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/forcefield.h:233:16: warning: 'MEM [(double *)&constraint + 16B]' may be used uninitialized in this function [-Wmaybe-uninitialized] 233 | class OBFPRT OBFFConstraint | ^~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefield.cpp: In member function 'OpenBabel::OBFFConstraints::AddAtomConstraint(int)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/forcefield.h:233:16: warning: 'MEM [(double *)&constraint + 16B]' may be used uninitialized in this function [-Wmaybe-uninitialized] 233 | class OBFPRT OBFFConstraint | ^~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefield.cpp: In member function 'OpenBabel::OBForceField::FastRotorSearch(bool)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefield.cpp:1410:11: warning: 'minE' may be used uninitialized in this function [-Wmaybe-uninitialized] 1410 | if (minE < best_minE) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefield.cpp:1393:29: warning: 'minj' may be used uninitialized in this function [-Wmaybe-uninitialized] 1393 | rotorKey[idx + 1] = minj; | ^~~~ [ 3%] Building CXX object src/CMakeFiles/openbabel.dir/graphsym.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 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/usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/openbabel.dir/grid.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/grid.cpp [ 4%] Building CXX object src/CMakeFiles/openbabel.dir/griddata.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/openbabel.dir/griddata.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/griddata.cpp [ 4%] Building CXX object src/CMakeFiles/openbabel.dir/isomorphism.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/openbabel.dir/isomorphism.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/isomorphism.cpp [ 4%] Building CXX object src/CMakeFiles/openbabel.dir/kekulize.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/openbabel.dir/kekulize.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/kekulize.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/kekulize.cpp: In function 'bool OpenBabel::NeedsDoubleBond(OpenBabel::OBAtom*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/kekulize.cpp:94:15: warning: unused variable 'nbr' [-Wunused-variable] 94 | OBAtom *nbr = bond->GetNbrAtom(atom); | ^~~ [ 4%] Building CXX object src/CMakeFiles/openbabel.dir/locale.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/openbabel.dir/locale.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/locale.cpp [ 5%] Building CXX object src/CMakeFiles/openbabel.dir/matrix.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/openbabel.dir/matrix.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/matrix.cpp [ 5%] Building CXX object src/CMakeFiles/openbabel.dir/mcdlutil.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/openbabel.dir/mcdlutil.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp:423:5: warning: multi-line comment [-Wcomment] 423 | // / \ | ^ [ 5%] Building CXX object src/CMakeFiles/openbabel.dir/molchrg.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/openbabel.dir/molchrg.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/molchrg.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp: In member function 'bool OpenBabel::TSimpleMolecule::threeBondResolve(int, int, double&, double&, OpenBabel::neighbourlist*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp:968:16: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] 968 | for (i=0; i&, int, int)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp:1471:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 1471 | for (j=0; j::size_type' {aka 'long unsigned int'} [-Wsign-compare] 1478 | } while (k&, std::vector&, std::vector >&, std::vector&, std::vector&, std::vector&, std::vector&, std::vector&)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp:2009:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 2009 | for (j=0; j0) atDef=atDef+1; | ~^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp:2019:30: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 2019 | if (cN>=0) if (maxAtDef==atomCycle[cN].size()) { | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp:2034:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 2034 | for (j=1; j::size_type' {aka 'long unsigned int'} [-Wsign-compare] 2040 | for (j=0;currNumDef < atomClean && j&, std::vector, std::vector&, std::vector >&, std::vector&, std::vector&, std::vector&, std::vector&)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp:2107:98: warning: comparison of integer expressions of different signedness: 'std::vector::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare] 2107 | if (baseCycle>0) for (i=0; i, std::vector, int, int&, int, int, int, bool)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp:2238:67: warning: comparison of integer expressions of different signedness: 'std::vector::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare] 2238 | for (j=0; j::size_type' {aka 'long unsigned int'} [-Wsign-compare] 2240 | for (k=0; k::size_type' {aka 'long unsigned int'} [-Wsign-compare] 2264 | for (j=1; j::size_type' {aka 'long unsigned int'} [-Wsign-compare] 2575 | if ((nb + i) > dsATN.size()) nb=dsATN.size()-i; // Check added to avoid segfault below, see issue #1851 | ~~~~~~~~~^~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp: In member function 'void OpenBabel::TSimpleMolecule::flipSmall(int)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp:2985:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 2985 | for (i=0; i::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3024 | for (i=0; i, long unsigned int>::value_type' {aka 'long unsigned int'} [-Wsign-compare] 3103 | if (bond->at[0]==dblbond->bstereo_refs[ref_atom1] || bond->at[1]==dblbond->bstereo_refs[ref_atom1]) /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp:3103:75: warning: comparison of integer expressions of different signedness: 'short int' and '__gnu_cxx::__alloc_traits, long unsigned int>::value_type' {aka 'long unsigned int'} [-Wsign-compare] 3103 | if (bond->at[0]==dblbond->bstereo_refs[ref_atom1] || bond->at[1]==dblbond->bstereo_refs[ref_atom1]) /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp:3105:26: warning: comparison of integer expressions of different signedness: 'short int' and '__gnu_cxx::__alloc_traits, long unsigned int>::value_type' {aka 'long unsigned int'} [-Wsign-compare] 3105 | if (bond->at[0]==dblbond->bstereo_refs[ref_atom2] || bond->at[1]==dblbond->bstereo_refs[ref_atom2]) /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp:3105:75: warning: comparison of integer expressions of different signedness: 'short int' and '__gnu_cxx::__alloc_traits, long unsigned int>::value_type' {aka 'long unsigned int'} [-Wsign-compare] 3105 | if (bond->at[0]==dblbond->bstereo_refs[ref_atom2] || bond->at[1]==dblbond->bstereo_refs[ref_atom2]) /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp: In function 'bool OpenBabel::compareAtoms(int, int, std::vector*>)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp:3127:37: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector*>::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3127 | if ((a1 < 0) || (a2 < 0) || (a1 >= aeqList.size()) || (a2 >= aeqList.size())) return result; | ~~~^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp:3127:63: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector*>::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3127 | if ((a1 < 0) || (a2 < 0) || (a1 >= aeqList.size()) || (a2 >= aeqList.size())) return result; | ~~~^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp: In member function 'void OpenBabel::TSimpleMolecule::makeEquivalentList(std::vector&, bool)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp:3291:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3291 | for (j=0; jsize(); j++) (*lL)[i]=0; | ~^~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp:3299:16: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3299 | for (i=0; i*>::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3309 | for (int i=0; i&, std::vector)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp:3325:13: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'const value_type' {aka 'const int'} [-Wsign-compare] 3325 | if (l <= maxValues[i]) { /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp: In member function 'int OpenBabel::TSimpleMolecule::correctOverlapped()': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp:3374:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3374 | for (i=0; i::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3427 | for (i=0; i::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3437 | for (i=0; i*, int)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp:3540:44: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] 3540 | for (i=0; isize(); i++) if (i != index) { | ~~^~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp: In member function 'void OpenBabel::TEditedMolecule::addAsTemplate(OpenBabel::TEditedMolecule&, int, int, int, int, bool)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp:4216:19: warning: variable 'nBondsOld' set but not used [-Wunused-but-set-variable] 4216 | int nAtomsOld,nBondsOld,naDef1,naDef,i; | ^~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp:4217:10: warning: variable 'test' set but not used [-Wunused-but-set-variable] 4217 | bool test,test1,test2; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp:4217:15: warning: variable 'test1' set but not used [-Wunused-but-set-variable] 4217 | bool test,test1,test2; | ^~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp:4217:21: warning: variable 'test2' set but not used [-Wunused-but-set-variable] 4217 | bool test,test1,test2; | ^~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp:4219:40: warning: variable 'xCenter' set but not used [-Wunused-but-set-variable] 4219 | double r,scale,xOld,yOld,xNew,yNew,xCenter,yCenter; | ^~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp:4219:48: warning: variable 'yCenter' set but not used [-Wunused-but-set-variable] 4219 | double r,scale,xOld,yOld,xNew,yNew,xCenter,yCenter; | ^~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp: In member function 'OpenBabel::TEditedMolecule* OpenBabel::TEditedMolecule::extractFragment(int, std::vector*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp:4410:35: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 4410 | if (list.size()>1) for (i=0; i<(list.size()-1); i++) for (j=i+1; jlist[j]) { | ~^~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp:4410:71: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 4410 | if (list.size()>1) for (i=0; i<(list.size()-1); i++) for (j=i+1; jlist[j]) { | ~^~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp:4415:16: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 4415 | for (i=0; i::size_type' {aka 'long unsigned int'} [-Wsign-compare] 4418 | for (i=0; i::size_type' {aka 'long unsigned int'} [-Wsign-compare] 4591 | for (j=0; j::size_type' {aka 'long unsigned int'} [-Wsign-compare] 4596 | for (i=0; i::size_type' {aka 'long unsigned int'} [-Wsign-compare] 4601 | for (i=0; i*, std::vector*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp:4636:31: warning: comparison of integer expressions of different signedness: 'std::vector::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare] 4636 | if (qEnumerator->size() != nAtoms()) qEnumerator->resize(nAtoms()); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp:4637:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 4637 | for (i=0; isize(); i++) (*qEnumerator)[i]=i; | ~^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp:4666:24: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 4666 | for (j=0; jsize(); j++) { | ~^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp: In member function 'bool OpenBabel::TEditedMolecule::fragmentSearch(OpenBabel::TEditedMolecule*, std::vector*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp:4853:32: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 4853 | if (molecule1->listarSize()>aSTested.size()) aSTested.resize(molecule1->listarSize()); | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp:4854:32: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 4854 | if (molecule1->listarSize()>bSTested.size()) bSTested.resize(molecule1->listarSize()); | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp:4855:32: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 4855 | if (molecule1->listarSize()>queryQHydr.size()) queryQHydr.resize(molecule1->listarSize()); | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp:4856:32: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 4856 | if (molecule1->listarSize()>queryAQTested.size()) queryAQTested.resize(molecule1->listarSize()); | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp:4857:32: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 4857 | if (molecule1->listarSize()>queryBQTested.size()) queryBQTested.resize(molecule1->listarSize()); | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp:4858:32: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 4858 | if (molecule1->listarSize()>queryCurrentAssignment.size()) queryCurrentAssignment.resize(molecule1->listarSize()); | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp:4859:27: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 4859 | if (this->listarSize()>queryAQTested.size()) queryAQTested.resize(this->listarSize()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp:5036:10: warning: suggest explicit braces to avoid ambiguous 'else' [-Wdangling-else] 5036 | if (test2) for (j=0; jnBonds(); j++) if (bSTested[j]>=0) (*bondLabel)[j]=1; else (*bondLabel)[j]=0; | ^ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp:4840:9: warning: variable 'cycleNumber' set but not used [-Wunused-but-set-variable] 4840 | int cycleNumber; | ^~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp: In member function 'bool OpenBabel::TemplateRedraw::internalBondsPresent(OpenBabel::TEditedMolecule*, OpenBabel::TSimpleMolecule*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp:5205:16: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] 5205 | for (i=0; inAtoms(); i++) aList[mQuery->queryAQTested[i]]=1; | ~^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp:5206:16: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] 5206 | for (i=0; inBonds(); i++) bList[mQuery->queryBQTested[i]]=1; | ~^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp: In member function 'void OpenBabel::TemplateRedraw::rotateBondVertically(OpenBabel::TSimpleMolecule*, std::vector, int, double, double, double&, double&, double&, double&, double&, double&, int&)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp:5236:16: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 5236 | for (i=0; i::size_type' {aka 'long unsigned int'} [-Wsign-compare] 5281 | for (i=0; i*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp:5315:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 5315 | for (i=0; isize(); i++) { | ~^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp:5332:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 5332 | for (i=0; i::size_type' {aka 'long unsigned int'} [-Wsign-compare] 5362 | for (i=0; i::size_type' {aka 'long unsigned int'} [-Wsign-compare] 5372 | for (i=0; i*, OpenBabel::PartFragmentDefinition&, double)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp:5403:16: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 5403 | for (i=0; isize(); i++) { | ~^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp:5416:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 5416 | for (i=0; isize(); i++) { | ~^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp:5432:16: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 5432 | for (i=0; isize(); i++) { | ~^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp: In member function 'int OpenBabel::TemplateRedraw::coordinatesPrepare(OpenBabel::TEditedMolecule&, int, int)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp:5671:17: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 5671 | for (i=kk; ifragmentSearch(&sm,nullptr)) { | ~^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp:5719:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 5719 | for (i=0; i::size_type' {aka 'long unsigned int'} [-Wsign-compare] 5722 | for (i=0; i::size_type' {aka 'long unsigned int'} [-Wsign-compare] 5730 | for (j=0; j::size_type' {aka 'long unsigned int'} [-Wsign-compare] 5802 | for (i=0; i::size_type' {aka 'long unsigned int'} [-Wsign-compare] 5832 | for (i=0; i::size_type' {aka 'long unsigned int'} [-Wsign-compare] 5898 | for (j=0; j::size_type' {aka 'long unsigned int'} [-Wsign-compare] 5910 | for (frCount=0; frCount::size_type' {aka 'long unsigned int'} [-Wsign-compare] 5926 | for (frCount=0; frCount::size_type' {aka 'long unsigned int'} [-Wsign-compare] 5949 | for (i=0; i::size_type' {aka 'long unsigned int'} [-Wsign-compare] 5964 | for (frCount=0; frCount::size_type' {aka 'long unsigned int'} [-Wsign-compare] 6004 | for (i=0;i::size_type' {aka 'long unsigned int'} [-Wsign-compare] 6011 | for (i=0; i::size_type' {aka 'long unsigned int'} [-Wsign-compare] 6030 | for (i=0; i::size_type' {aka 'long unsigned int'} [-Wsign-compare] 6038 | for (i=0; i::size_type' {aka 'long unsigned int'} [-Wsign-compare] 6039 | for (i=0; i::size_type' {aka 'long unsigned int'} [-Wsign-compare] 6040 | for (i=0; i::size_type' {aka 'long unsigned int'} [-Wsign-compare] 6363 | if (result >= instring.length()) result=-1; | ~~~~~~~^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp: In function 'std::string OpenBabel::getAtomMCDL(OpenBabel::OBMol*, int, std::vector, std::vector, std::vector, std::vector)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp:6550:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 6550 | for (j=0; j::size_type' {aka 'long unsigned int'} [-Wsign-compare] 6595 | if (anumStereo.size() > 1) for (i=0; i<(anumStereo.size()-1); i++) if (anumStereo[i] >= 0) { | ~^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp:6597:24: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 6597 | for (j=i+1; j= 0) && (anumStereo[j] >= 0)) if (eqList[anumStereo[i]] == eqList[anumStereo[j]]) n++; | ~^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp:6603:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 6603 | for (j=i+1; j= 0) && (anumStereo[j] >= 0)) if (eqList[anumStereo[i]] == eqList[anumStereo[j]]) { | ~^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp:6613:28: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 6613 | for (j=i+1; j= 0) && (anumStereo[j] >= 0)) if (eqList[anumStereo[i]] == eqList[anumStereo[j]]) anumStereo[j]=-1; | ~^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp:6616:28: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 6616 | for (j=i+1; j= 0) && (anumStereo[j] >= 0)) if (eqList[anumStereo[i]] == eqList[anumStereo[j]]) anumStereo[j]=-2; | ~^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp:6627:30: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 6627 | if (k == 1) for (i=0; i >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 6636 | if (v.size() > 1) for (i=0; i<(v.size() - 1); i++) for (j=i+1; j >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 6636 | if (v.size() > 1) for (i=0; i<(v.size() - 1); i++) for (j=i+1; j >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 6646 | for (i=0; i < v.size(); i++) { | ~~^~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp: In function 'std::string OpenBabel::getBondMCDL(OpenBabel::OBMol*, int, int, std::vector, std::vector, int (*)[4], std::vector, std::vector)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp:6847:43: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 6847 | if (anumStereo.size() > 1) for (i=0; i<(anumStereo.size()-1); i++) if (anumStereo[i] >= 0) { | ~^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp:6849:24: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 6849 | for (j=i+1; j::size_type' {aka 'long unsigned int'} [-Wsign-compare] 6854 | for (j=i+1; j::size_type' {aka 'long unsigned int'} [-Wsign-compare] 6868 | for (j=i+1; j::size_type' {aka 'long unsigned int'} [-Wsign-compare] 6876 | for (j=i+1; j >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 6881 | if (v.size() > 1) for (i=0; i<(v.size() - 1); i++) for (j=i+1; j >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 6881 | if (v.size() > 1) for (i=0; i<(v.size() - 1); i++) for (j=i+1; j >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 6891 | for (i=0; i < v.size(); i++) { | ~~^~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp:6684:26: warning: variable 'n4' set but not used [-Wunused-but-set-variable] 6684 | int i,j,n,m,n1,n2,n3,n4,an1,an2,an3,an4,k; | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp: In function 'void OpenBabel::implementAtomStereo(std::vector&, std::vector&, std::vector&, std::vector, std::vector, int, int, std::string)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp:6964:16: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string::size_type' {aka 'long unsigned int'} [-Wsign-compare] 6964 | if (n1 < (astereo.length()-1)) astereo=astereo.substr(n1+1); else astereo=""; | ~~~^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp: In function 'void OpenBabel::implementBondStereo(std::vector, std::vector, std::vector&, std::vector&, int, int, std::string)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp:7028:16: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string::size_type' {aka 'long unsigned int'} [-Wsign-compare] 7028 | if (n1 < (bstereo.length()-1)) bstereo=bstereo.substr(n1+1); else bstereo=""; | ~~~^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp: In function 'int OpenBabel::groupRedraw(OpenBabel::OBMol*, int, int, bool)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp:7163:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 7163 | for (i=0; i::size_type' {aka 'long unsigned int'} [-Wsign-compare] 7171 | for (int i=0; i&, int&)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp:7213:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string::size_type' {aka 'long unsigned int'} [-Wsign-compare] 7213 | if (n='0') && (value.at(n)<='9')) { | ~^~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp:7216:27: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string::size_type' {aka 'long unsigned int'} [-Wsign-compare] 7216 | while ((n2<(value.length()-1)) && (value.at(n2)>='0') && (value.at(n2)<='9')) n2++; | ~~^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp:7237:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string::size_type' {aka 'long unsigned int'} [-Wsign-compare] 7237 | if (n='0') && (value.at(n)<='9')) { | ~^~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp:7240:27: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string::size_type' {aka 'long unsigned int'} [-Wsign-compare] 7240 | while ((n2<(value.length()-1)) && (value.at(n2)>='0') && (value.at(n2)<='9')) n2++; | ~~^~~~~~~~~~~~~~~~~~~ [ 5%] Building CXX object src/CMakeFiles/openbabel.dir/mol.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/openbabel.dir/mol.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mol.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mol.cpp: In member function 'unsigned int OpenBabel::OBMol::NumHvyAtoms()': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mol.cpp:809:30: warning: unnecessary parentheses in declaration of 'i' [-Wparentheses] 809 | vector::iterator(i); | ^ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mol.cpp: In member function 'unsigned int OpenBabel::OBMol::GetTotalSpinMultiplicity()': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mol.cpp:1221:21: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 1221 | if (chg % 2 != unpaired_electrons %2) | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/bond.h:32, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mol.cpp:23: /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mol.cpp: In member function 'OpenBabel::OBMol::CopySubstructure(OpenBabel::OBMol&, OpenBabel::OBBitVec*, OpenBabel::OBBitVec*, unsigned int, std::vector >*, std::vector >*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/atom.h:189:63: warning: 'atomE' may be used uninitialized in this function [-Wmaybe-uninitialized] 189 | unsigned int GetIdx() const { return((int)_idx); } | ^ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mol.cpp:4279:29: note: 'atomE' was declared here 4279 | OBAtom *atomB, *atomE; | ^~~~~ In file included from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/bond.h:32, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mol.cpp:23: /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/atom.h:189:63: warning: 'atomB' may be used uninitialized in this function [-Wmaybe-uninitialized] 189 | unsigned int GetIdx() const { return((int)_idx); } | ^ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mol.cpp:4279:21: note: 'atomB' was declared here 4279 | OBAtom *atomB, *atomE; | ^~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp: In member function 'OpenBabel::TEditedMolecule::addAsTemplate(OpenBabel::TEditedMolecule&, int, int, int, int, bool)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/mcdlutil.cpp:4333:16: warning: 'r1' may be used uninitialized in this function [-Wmaybe-uninitialized] 4333 | xNew=r1*scale*xu1+this->getAtom(thisAN)->rx; | ~~^~~~~~ [ 5%] Building CXX object src/CMakeFiles/openbabel.dir/obconversion.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 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-I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/openbabel.dir/oberror.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/oberror.cpp [ 6%] Building CXX object src/CMakeFiles/openbabel.dir/obfunctions.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables 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-I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/openbabel.dir/obutil.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/obutil.cpp In file included from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/obiter.cpp:27: /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/obiter.h: In constructor 'OpenBabel::OBMolRingIter::OBMolRingIter(OpenBabel::OBMol*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/obiter.h:375:12: warning: 'OpenBabel::OBMolRingIter::_parent' will be initialized after [-Wreorder] 375 | OBMol *_parent; | ^~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/obiter.h:374:13: warning: 'OpenBabel::OBRing* OpenBabel::OBMolRingIter::_ptr' [-Wreorder] 374 | OBRing *_ptr; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/obiter.cpp:1022:3: warning: when initialized here [-Wreorder] 1022 | OBMolRingIter::OBMolRingIter(OBMol *mol): _parent(mol), _ptr(nullptr) | ^~~~~~~~~~~~~ In file included from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/obiter.cpp:27: /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/obiter.h: In constructor 'OpenBabel::OBMolRingIter::OBMolRingIter(OpenBabel::OBMol&)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/obiter.h:375:12: warning: 'OpenBabel::OBMolRingIter::_parent' will be initialized after [-Wreorder] 375 | OBMol *_parent; | ^~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/obiter.h:374:13: warning: 'OpenBabel::OBRing* OpenBabel::OBMolRingIter::_ptr' [-Wreorder] 374 | OBRing *_ptr; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/obiter.cpp:1032:3: warning: when initialized here [-Wreorder] 1032 | OBMolRingIter::OBMolRingIter(OBMol &mol): _parent(&mol), _ptr(nullptr) | ^~~~~~~~~~~~~ [ 6%] Building CXX object src/CMakeFiles/openbabel.dir/op.cpp.o cd 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-fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/openbabel.dir/parsmart.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/parsmart.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/parsmart.cpp: In function 'int OpenBabel::CreateAtom(OpenBabel::Pattern*, OpenBabel::AtomExpr*, int, int)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/parsmart.cpp:446:15: warning: variable 'size' set but not used [-Wunused-but-set-variable] 446 | int index,size; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/parsmart.cpp: 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-fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/openbabel.dir/plugin.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/plugin.cpp [ 7%] Building CXX object src/CMakeFiles/openbabel.dir/pointgroup.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/openbabel.dir/pointgroup.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/pointgroup.cpp [ 8%] Building CXX object src/CMakeFiles/openbabel.dir/query.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/openbabel.dir/query.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/query.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/pointgroup.cpp: In member function 'int OpenBabel::PointGroupPrivate::establish_pairs(OpenBabel::PointGroupPrivate::SYMMETRY_ELEMENT*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/pointgroup.cpp:267:32: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 267 | if( elem->transform[i] >= _mol->NumAtoms() ){ /* No symmetric atom yet */ | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/pointgroup.cpp: In member function 'int OpenBabel::PointGroupPrivate::check_transform_order(OpenBabel::PointGroupPrivate::SYMMETRY_ELEMENT*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/pointgroup.cpp:311:32: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 311 | if( elem->transform[i] == i ) /* Identity transform is Ok for any order */ | ~~~~~~~~~~~~~~~~~~~^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/pointgroup.cpp:315:34: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 315 | if( elem->transform[j] == i ) | ~~~~~~~~~~~~~~~~~~~^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/pointgroup.cpp: In member function 'int OpenBabel::PointGroupPrivate::same_transform(OpenBabel::PointGroupPrivate::SYMMETRY_ELEMENT*, OpenBabel::PointGroupPrivate::SYMMETRY_ELEMENT*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/pointgroup.cpp:358:31: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 358 | if( b->transform[j] != i ) | ~~~~~~~~~~~~~~~~^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/pointgroup.cpp: In member function 'OpenBabel::OBPointGroup::Symbol OpenBabel::OBPointGroup::IdentifyPointGroupSymbol(double)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/pointgroup.cpp:1958:37: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 1958 | || d->NormalAxesCounts[2] >= maxAxis) { // Are there the perpendicular C2 axes? | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/pointgroup.cpp:1961:28: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 1961 | if (d->PlanesCount >= maxAxis + 1) { // Likely Dnh | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/pointgroup.cpp:1986:33: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 1986 | else if (d->PlanesCount == maxAxis) { // Likely Dnd | ~~~~~~~~~~~~~~~^~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/pointgroup.cpp:2088:29: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 2088 | else if (d->PlanesCount >= maxAxis) { // Cnv | ~~~~~~~~~~~~~~~^~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/pointgroup.cpp: In member function 'void OpenBabel::OBPointGroup::Symmetrize(OpenBabel::OBMol*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/pointgroup.cpp:2175:32: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] 2175 | for (unsigned int i = 0; i < d->PlanesCount; i++) | ~~^~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/pointgroup.cpp:2182:32: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] 2182 | for (unsigned int i = 0; i < d->NormalAxesCount; i++) | ~~^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/pointgroup.cpp:2189:32: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] 2189 | for (unsigned int i = 0; i < d->ImproperAxesCount; i++) | ~~^~~~~~~~~~~~~~~~~~~~~~ [ 8%] Building CXX object src/CMakeFiles/openbabel.dir/rand.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/openbabel.dir/rand.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/rand.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/rand.cpp:428:15: warning: 'void OpenBabel::GenerateSequence(unsigned int, unsigned int, unsigned int, unsigned int)' defined but not used [-Wunused-function] 428 | static void GenerateSequence( unsigned int p, unsigned int m, | ^~~~~~~~~~~~~~~~ [ 8%] Building CXX object src/CMakeFiles/openbabel.dir/reactionfacade.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/openbabel.dir/reactionfacade.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/reactionfacade.cpp [ 8%] Building CXX object src/CMakeFiles/openbabel.dir/residue.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/openbabel.dir/residue.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/residue.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/reactionfacade.cpp: In member function 'void OpenBabel::OBReactionFacadePrivate::FindComponents()': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/reactionfacade.cpp:122:15: warning: unused variable 'atm' [-Wunused-variable] 122 | OBAtom* atm = &*atom; | ^~~ [ 8%] Building CXX object src/CMakeFiles/openbabel.dir/ring.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/openbabel.dir/ring.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/ring.cpp [ 9%] Building CXX object src/CMakeFiles/openbabel.dir/rotamer.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/openbabel.dir/rotamer.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/rotamer.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/rotamer.cpp: In member function 'void OpenBabel::OBRotamerList::AddRotamer(std::vector)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/rotamer.cpp:410:11: warning: this 'while' clause does not guard... [-Wmisleading-indentation] 410 | while (angle < 0.0) | ^~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/rotamer.cpp:412:10: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'while' 412 | while (angle > 360.0) | ^~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/rotamer.cpp: In member function 'bool OpenBabel::OBRotamerList::SetCurrentCoordinates(OpenBabel::OBMol&, std::vector)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/rotamer.cpp:543:11: warning: this 'while' clause does not guard... [-Wmisleading-indentation] 543 | while (angle < 0.0) | ^~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/rotamer.cpp:545:10: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'while' 545 | while (angle > 360.0) | ^~~~~ [ 9%] Building CXX object src/CMakeFiles/openbabel.dir/rotor.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/openbabel.dir/rotor.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/rotor.cpp [ 9%] Building CXX object src/CMakeFiles/openbabel.dir/spectrophore.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ 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src/CMakeFiles/openbabel.dir/tautomer.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 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/usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/openbabel.dir/tokenst.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/tokenst.cpp [ 10%] Building CXX object src/CMakeFiles/openbabel.dir/transform.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ 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cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables 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-ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/openbabel.dir/obmolecformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/obmolecformat.cpp [ 10%] Building CXX object src/CMakeFiles/openbabel.dir/conformersearch.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/openbabel.dir/conformersearch.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/conformersearch.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/conformersearch.cpp: In member function 'virtual double OpenBabel::OBMinimizingRMSDConformerScore::Score(OpenBabel::OBMol&, unsigned int, const RotorKeys&, const std::vector&)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/conformersearch.cpp:250:12: warning: unused variable 'score' [-Wunused-variable] 250 | double score = ff->Energy(false); // no gradients | ^~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/conformersearch.cpp: In member function 'bool OpenBabel::OBConformerSearch::Setup(const OpenBabel::OBMol&, int, int, int, int)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/conformersearch.cpp:351:23: warning: variable 'end_it' set but not used [-Wunused-but-set-variable] 351 | OBRotorIterator end_it = m_rotorList.EndRotors(); | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/conformersearch.cpp: In member function 'int OpenBabel::OBConformerSearch::local_opt()': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/conformersearch.cpp:789:19: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare] 789 | for (i = 1; i <= m_rotorList.Size(); ++i, rotor = m_rotorList.NextRotor(ri)) | ~~^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/conformersearch.cpp: In member function 'int OpenBabel::OBConformerSearch::reproduce(OpenBabel::RotorKey&, OpenBabel::RotorKey&)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/conformersearch.cpp:850:16: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] 850 | if (iniche > -1) | ~~~~~~~^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/conformersearch.cpp: In member function 'int OpenBabel::OBConformerSearch::share_fitness()': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/conformersearch.cpp:1005:37: warning: comparison of integer expressions of different signedness: 'std::vector >::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare] 1005 | if ((dynamic_niches.size () < nb_niches) && (dynamic_niches.size () %2)) | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/conformersearch.cpp:1020:30: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 1020 | if (dist < min_dist ) | ~~~~~^~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/conformersearch.cpp:1033:18: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] 1033 | if (imax == -1) | ~~~~~^~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/conformersearch.cpp:1050:40: warning: comparison of integer expressions of different signedness: 'std::vector >::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare] 1050 | if (dynamic_niches.size () < nb_niches) | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/conformersearch.cpp:976:10: warning: unused variable 'flag_niched' [-Wunused-variable] 976 | bool flag_niched = false; | ^~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/conformersearch.cpp: In member function 'double OpenBabel::OBConformerSearch::sharing_generation()': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/conformersearch.cpp:1139:20: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 1139 | while (ninsert < ((half_pop * 2) / 3)) | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/conformersearch.cpp:1148:24: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 1148 | if (iround < imax) | ~~~~~~~^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/conformersearch.cpp:1156:33: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 1156 | if (ninsert >= half_pop) | ~~~~~~~~^~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/conformersearch.cpp:1181:20: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 1181 | while (ninsert < half_pop) | ~~~~~~~~^~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/conformersearch.cpp:1105:23: warning: unused variable 'lowest' [-Wunused-variable] 1105 | double sum = 0.0, lowest = 0.0, highest = 0.0; | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/conformersearch.cpp:1105:37: warning: unused variable 'highest' [-Wunused-variable] 1105 | double sum = 0.0, lowest = 0.0, highest = 0.0; | ^~~~~~~ [ 10%] Building CXX object src/CMakeFiles/openbabel.dir/confsearch.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/openbabel.dir/confsearch.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/confsearch.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/confsearch.cpp: In member function 'bool OpenBabel::OBDiversePoses::AddPose(std::vector, double)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/confsearch.cpp:189:14: warning: unused variable 'min_rmsd' [-Wunused-variable] 189 | double min_rmsd = DBL_MAX; | ^~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/conformersearch.cpp: In member function 'OpenBabel::OBConformerSearch::MakeSelection()': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/conformersearch.cpp:549:31: warning: 'highest' may be used uninitialized in this function [-Wmaybe-uninitialized] 549 | double sum = 0.0, lowest, highest; | ^~~~~~~ [ 11%] Building CXX object src/CMakeFiles/openbabel.dir/distgeom.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/openbabel.dir/distgeom.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/distgeom.cpp [ 11%] Building CXX object src/CMakeFiles/openbabel.dir/dlhandler_unix.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/openbabel.dir/dlhandler_unix.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/dlhandler_unix.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/distgeom.cpp:54: warning: ignoring '#pragma warning ' [-Wunknown-pragmas] 54 | #pragma warning(disable : 4244) // warning C4244: '=' : conversion from 'double' to 'float', possible loss of data | /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/distgeom.cpp:55: warning: ignoring '#pragma warning ' [-Wunknown-pragmas] 55 | #pragma warning(disable : 4305) // warning C4305: '*=' : truncation from 'double' to 'float' | /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/distgeom.cpp:619:3: warning: multi-line comment [-Wcomment] 619 | // \ | ^ [ 11%] Building CXX object src/CMakeFiles/openbabel.dir/depict/depict.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/openbabel.dir/depict/depict.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/depict/depict.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/distgeom.cpp: In member function 'bool OpenBabel::OBDistanceGeometry::generateInitialCoords()': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/distgeom.cpp:1089:16: warning: unused variable 'lb' [-Wunused-variable] 1089 | double lb = _d->GetLowerBounds(i, j); | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/distgeom.cpp:1090:16: warning: unused variable 'ub' [-Wunused-variable] 1090 | double ub = _d->GetUpperBounds(i, j); | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/distgeom.cpp: In member function 'bool OpenBabel::OBDistanceGeometry::firstMinimization()': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/distgeom.cpp:1136:16: warning: unused variable 'lb' [-Wunused-variable] 1136 | double lb = _d->GetLowerBounds(i, j); | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/distgeom.cpp:1137:16: warning: unused variable 'ub' [-Wunused-variable] 1137 | double ub = _d->GetUpperBounds(i, j); | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/distgeom.cpp:1115:9: warning: unused variable 'niter' [-Wunused-variable] 1115 | int niter = solver.minimize(fun, _coord, fx); | ^~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/distgeom.cpp: In member function 'bool OpenBabel::OBDistanceGeometry::minimizeFourthDimension()': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/distgeom.cpp:1160:9: warning: unused variable 'niter' [-Wunused-variable] 1160 | int niter = solver.minimize(fun, _coord, fx); | ^~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/distgeom.cpp: In member function 'double OpenBabel::DistGeomFunc::operator()(const VectorXd&, Eigen::VectorXd&)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/distgeom.cpp:1325:23: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'Eigen::Index' {aka 'long int'} [-Wsign-compare] 1325 | for (size_t i=0; iGetFontMetrics(str); | ^~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/depict/depict.cpp:1029:21: warning: variable 'metrics' set but not used [-Wunused-but-set-variable] 1029 | OBFontMetrics metrics = painter->GetFontMetrics(subscript); | ^~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/depict/depict.cpp: In member function 'OpenBabel::OBDepict::DrawMolecule(OpenBabel::OBMol*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/depict/depict.cpp:465:25: warning: 'max_z' may be used uninitialized in this function [-Wmaybe-uninitialized] 465 | d->zScale = max_z - min_z; | ~~~~~~^~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/depict/depict.cpp:465:25: warning: 'min_z' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/depict/depict.cpp:463:22: warning: 'max_y' may be used uninitialized in this function [-Wmaybe-uninitialized] 463 | height = max_y - min_y + 2*margin; | ~~~~~~^~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/depict/depict.cpp:463:22: warning: 'min_y' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/depict/depict.cpp:462:22: warning: 'max_x' may be used uninitialized in this function [-Wmaybe-uninitialized] 462 | width = max_x - min_x + 2*margin; | ~~~~~~^~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/depict/depict.cpp:462:22: warning: 'min_x' may be used uninitialized in this function [-Wmaybe-uninitialized] [ 11%] Building CXX object src/CMakeFiles/openbabel.dir/depict/svgpainter.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/openbabel.dir/depict/svgpainter.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/depict/svgpainter.cpp In file included from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/depict/svgpainter.cpp:18: /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/depict/svgpainter.h: In constructor 'OpenBabel::SVGPainter::SVGPainter(std::ostream&, std::set >*, bool, double, double)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/depict/svgpainter.h:77:11: warning: 'OpenBabel::SVGPainter::m_fontPointSize' will be initialized after [-Wreorder] 77 | int m_fontPointSize; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/depict/svgpainter.h:75:12: warning: 'bool OpenBabel::SVGPainter::m_isFillcolor' [-Wreorder] 75 | bool m_isFillcolor; | ^~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/depict/svgpainter.cpp:34:3: warning: when initialized here [-Wreorder] 34 | SVGPainter::SVGPainter(ostream& ofs, std::set* gradients, bool withViewBox, | ^~~~~~~~~~ In file included from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/depict/svgpainter.cpp:18: /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/depict/svgpainter.h:75:12: warning: 'OpenBabel::SVGPainter::m_isFillcolor' will be initialized after [-Wreorder] 75 | bool m_isFillcolor; | ^~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/depict/svgpainter.h:74:32: warning: 'std::set >* OpenBabel::SVGPainter::m_Gradients' [-Wreorder] 74 | std::set *m_Gradients; | ^~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/depict/svgpainter.cpp:34:3: warning: when initialized here [-Wreorder] 34 | SVGPainter::SVGPainter(ostream& ofs, std::set* gradients, bool withViewBox, | ^~~~~~~~~~ [ 11%] Building CXX object src/CMakeFiles/openbabel.dir/math/matrix3x3.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/openbabel.dir/math/matrix3x3.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/math/matrix3x3.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/math/matrix3x3.cpp: In function 'OpenBabel::matrix3x3::jacobi(unsigned int, double*, double*, double*)': cc1plus: warning: iteration 2147483647 invokes undefined behavior [-Waggressive-loop-optimizations] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/math/matrix3x3.cpp:650:19: note: within this loop 650 | for (j = 0; j < static_cast(n)-1; j++) | ~~^~~~~~~~~~~~~~~~~~~~~~~ [ 12%] Building CXX object src/CMakeFiles/openbabel.dir/math/spacegroup.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/openbabel.dir/math/spacegroup.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/math/spacegroup.cpp [ 12%] Building CXX object src/CMakeFiles/openbabel.dir/math/transform3d.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/openbabel.dir/math/transform3d.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/math/transform3d.cpp [ 12%] Building CXX object src/CMakeFiles/openbabel.dir/math/vector3.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/openbabel.dir/math/vector3.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/math/vector3.cpp [ 12%] Building CXX object src/CMakeFiles/openbabel.dir/math/align.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/openbabel.dir/math/align.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/math/align.cpp [ 12%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/stereo.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/openbabel.dir/stereo/stereo.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/stereo/stereo.cpp [ 13%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/tetranonplanar.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/openbabel.dir/stereo/tetranonplanar.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/stereo/tetranonplanar.cpp [ 13%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/tetraplanar.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/openbabel.dir/stereo/tetraplanar.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/stereo/tetraplanar.cpp [ 13%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/squareplanar.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/openbabel.dir/stereo/squareplanar.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/stereo/squareplanar.cpp [ 13%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/cistrans.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/openbabel.dir/stereo/cistrans.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/stereo/cistrans.cpp [ 13%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/tetrahedral.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/openbabel.dir/stereo/tetrahedral.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/stereo/tetrahedral.cpp [ 14%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/perception.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/openbabel.dir/stereo/perception.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/stereo/perception.cpp [ 14%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/facade.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/openbabel.dir/stereo/facade.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/stereo/facade.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/stereo/perception.cpp: In function 'bool OpenBabel::TetStereoToWedgeHash(OpenBabel::OBMol&, std::map&, std::map&)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/stereo/perception.cpp:2795:5: warning: this 'for' clause does not guard... [-Wmisleading-indentation] 2795 | for (std::vector::iterator data = vdata.begin(); data != vdata.end(); ++data) | ^~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/stereo/perception.cpp:2951:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for' 2951 | return true; | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/stereo/perception.cpp: In function 'void OpenBabel::StereoRefToImplicit(OpenBabel::OBMol&, OpenBabel::OBStereo::Ref)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/stereo/perception.cpp:2973:16: warning: 'template class std::binder1st' is deprecated [-Wdeprecated-declarations] 2973 | const std::binder1st > equal_to_atomId = std::bind1st (equal_to(), atomId); | ^~~~~~~~~ In file included from /usr/include/c++/10/bits/stl_function.h:1392, from /usr/include/c++/10/bits/stl_tree.h:65, from /usr/include/c++/10/map:60, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/base.h:26, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/stereo/stereo.h:27, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/stereo/tetranonplanar.h:27, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/stereo/tetrahedral.h:27, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/stereo/perception.cpp:26: /usr/include/c++/10/backward/binders.h:108:11: note: declared here 108 | class binder1st | ^~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/stereo/perception.cpp: In function 'void OpenBabel::ImplicitRefToStereo(OpenBabel::OBMol&, OpenBabel::OBStereo::Ref, OpenBabel::OBStereo::Ref)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/stereo/perception.cpp:3005:16: warning: 'template class std::binder1st' is deprecated [-Wdeprecated-declarations] 3005 | const std::binder1st > equal_to_implicitRef = std::bind1st (equal_to(), (OBStereo::Ref) OBStereo::ImplicitRef); | ^~~~~~~~~ In file included from /usr/include/c++/10/bits/stl_function.h:1392, from /usr/include/c++/10/bits/stl_tree.h:65, from /usr/include/c++/10/map:60, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/base.h:26, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/stereo/stereo.h:27, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/stereo/tetranonplanar.h:27, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/stereo/tetrahedral.h:27, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/stereo/perception.cpp:26: /usr/include/c++/10/backward/binders.h:108:11: note: declared here 108 | class binder1st | ^~~~~~~~~ [ 14%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/gen3dstereohelper.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/openbabel.dir/stereo/gen3dstereohelper.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/stereo/gen3dstereohelper.cpp [ 14%] Linking CXX shared library ../lib64/libopenbabel.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/openbabel.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -Wl,-soname,libopenbabel.so.7 -o ../lib64/libopenbabel.so.7.0.0 CMakeFiles/openbabel.dir/alias.cpp.o CMakeFiles/openbabel.dir/atom.cpp.o CMakeFiles/openbabel.dir/base.cpp.o CMakeFiles/openbabel.dir/bitvec.cpp.o CMakeFiles/openbabel.dir/bond.cpp.o CMakeFiles/openbabel.dir/bondtyper.cpp.o CMakeFiles/openbabel.dir/builder.cpp.o CMakeFiles/openbabel.dir/canon.cpp.o CMakeFiles/openbabel.dir/chains.cpp.o CMakeFiles/openbabel.dir/chargemodel.cpp.o CMakeFiles/openbabel.dir/data.cpp.o CMakeFiles/openbabel.dir/data_utilities.cpp.o CMakeFiles/openbabel.dir/descriptor.cpp.o CMakeFiles/openbabel.dir/elements.cpp.o CMakeFiles/openbabel.dir/fingerprint.cpp.o CMakeFiles/openbabel.dir/forcefield.cpp.o CMakeFiles/openbabel.dir/format.cpp.o CMakeFiles/openbabel.dir/generic.cpp.o CMakeFiles/openbabel.dir/graphsym.cpp.o CMakeFiles/openbabel.dir/grid.cpp.o CMakeFiles/openbabel.dir/griddata.cpp.o CMakeFiles/openbabel.dir/isomorphism.cpp.o CMakeFiles/openbabel.dir/kekulize.cpp.o CMakeFiles/openbabel.dir/locale.cpp.o CMakeFiles/openbabel.dir/matrix.cpp.o CMakeFiles/openbabel.dir/mcdlutil.cpp.o CMakeFiles/openbabel.dir/molchrg.cpp.o CMakeFiles/openbabel.dir/mol.cpp.o CMakeFiles/openbabel.dir/obconversion.cpp.o CMakeFiles/openbabel.dir/oberror.cpp.o CMakeFiles/openbabel.dir/obfunctions.cpp.o CMakeFiles/openbabel.dir/obiter.cpp.o CMakeFiles/openbabel.dir/obutil.cpp.o CMakeFiles/openbabel.dir/op.cpp.o CMakeFiles/openbabel.dir/parsmart.cpp.o CMakeFiles/openbabel.dir/patty.cpp.o CMakeFiles/openbabel.dir/phmodel.cpp.o CMakeFiles/openbabel.dir/plugin.cpp.o CMakeFiles/openbabel.dir/pointgroup.cpp.o CMakeFiles/openbabel.dir/query.cpp.o CMakeFiles/openbabel.dir/rand.cpp.o CMakeFiles/openbabel.dir/reactionfacade.cpp.o CMakeFiles/openbabel.dir/residue.cpp.o CMakeFiles/openbabel.dir/ring.cpp.o CMakeFiles/openbabel.dir/rotamer.cpp.o CMakeFiles/openbabel.dir/rotor.cpp.o CMakeFiles/openbabel.dir/spectrophore.cpp.o CMakeFiles/openbabel.dir/tautomer.cpp.o CMakeFiles/openbabel.dir/tokenst.cpp.o CMakeFiles/openbabel.dir/transform.cpp.o CMakeFiles/openbabel.dir/typer.cpp.o CMakeFiles/openbabel.dir/obmolecformat.cpp.o CMakeFiles/openbabel.dir/conformersearch.cpp.o CMakeFiles/openbabel.dir/confsearch.cpp.o CMakeFiles/openbabel.dir/distgeom.cpp.o CMakeFiles/openbabel.dir/dlhandler_unix.cpp.o CMakeFiles/openbabel.dir/depict/depict.cpp.o CMakeFiles/openbabel.dir/depict/svgpainter.cpp.o CMakeFiles/openbabel.dir/math/matrix3x3.cpp.o CMakeFiles/openbabel.dir/math/spacegroup.cpp.o CMakeFiles/openbabel.dir/math/transform3d.cpp.o CMakeFiles/openbabel.dir/math/vector3.cpp.o CMakeFiles/openbabel.dir/math/align.cpp.o CMakeFiles/openbabel.dir/stereo/stereo.cpp.o CMakeFiles/openbabel.dir/stereo/tetranonplanar.cpp.o CMakeFiles/openbabel.dir/stereo/tetraplanar.cpp.o CMakeFiles/openbabel.dir/stereo/squareplanar.cpp.o CMakeFiles/openbabel.dir/stereo/cistrans.cpp.o CMakeFiles/openbabel.dir/stereo/tetrahedral.cpp.o CMakeFiles/openbabel.dir/stereo/perception.cpp.o CMakeFiles/openbabel.dir/stereo/facade.cpp.o CMakeFiles/openbabel.dir/stereo/gen3dstereohelper.cpp.o -Wl,-rpath,::::::::::::::: -lm -ldl -lz -pthread /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/math/matrix3x3.cpp: In function 'jacobi': lto1: warning: iteration 2147483647 invokes undefined behavior [-Waggressive-loop-optimizations] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/math/matrix3x3.cpp:650:19: note: within this loop 650 | for (j = 0; j < static_cast(n)-1; j++) | ^ cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/cmake -E cmake_symlink_library ../lib64/libopenbabel.so.7.0.0 ../lib64/libopenbabel.so.7 ../lib64/libopenbabel.so gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 14%] Built target openbabel /usr/bin/gmake -f src/CMakeFiles/plugin_charges.dir/build.make src/CMakeFiles/plugin_charges.dir/depend /usr/bin/gmake -f src/CMakeFiles/plugin_ops.dir/build.make src/CMakeFiles/plugin_ops.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/CMakeFiles/plugin_charges.dir/DependInfo.cmake --color= gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/CMakeFiles/plugin_ops.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/CMakeFiles/plugin_ops.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/CMakeFiles/plugin_ops.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/CMakeFiles/plugin_ops.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/CMakeFiles/plugin_charges.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/CMakeFiles/plugin_charges.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/CMakeFiles/plugin_charges.dir/depend.internal". Scanning dependencies of target plugin_ops gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/CMakeFiles/plugin_ops.dir/build.make src/CMakeFiles/plugin_ops.dir/build Scanning dependencies of target plugin_charges gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/CMakeFiles/plugin_charges.dir/build.make src/CMakeFiles/plugin_charges.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 14%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/addfilename.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/addfilename.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/ops/addfilename.cpp [ 14%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/eem.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_charges_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/plugin_charges.dir/charges/eem.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/charges/eem.cpp [ 15%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/addinindex.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/addinindex.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/ops/addinindex.cpp [ 16%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/gasteiger.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_charges_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/plugin_charges.dir/charges/gasteiger.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/charges/gasteiger.cpp [ 16%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/addpolarh.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/addpolarh.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/ops/addpolarh.cpp [ 16%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/addnonpolarh.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/addnonpolarh.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/ops/addnonpolarh.cpp [ 16%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/none.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_charges_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/plugin_charges.dir/charges/none.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/charges/none.cpp [ 16%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/canonical.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/canonical.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/ops/canonical.cpp [ 16%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/mmff94.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_charges_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/plugin_charges.dir/charges/mmff94.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/charges/mmff94.cpp [ 16%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/changecell.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/changecell.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/ops/changecell.cpp [ 16%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/fromfile.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_charges_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/plugin_charges.dir/charges/fromfile.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/charges/fromfile.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/ops/changecell.cpp: In member function 'virtual bool OpenBabel::OpChangeCell::Do(OpenBabel::OBBase*, const char*, OpenBabel::OBOp::OpMap*, OpenBabel::OBConversion*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/ops/changecell.cpp:88:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 88 | for(int i = 0; i < vcvs.size(); i++) | ~~^~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/ops/changecell.cpp:119:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 119 | for(int i = 0; i < vcvs.size(); i++) | ~~^~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/charges/fromfile.cpp: In member function 'virtual bool OpenBabel::FromFileCharges::ComputeCharges(OpenBabel::OBMol&, const char*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/charges/fromfile.cpp:102:22: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 102 | for ( int i = 1; i <= mol.NumAtoms(); i++) | ~~^~~~~~~~~~~~~~~~~ [ 17%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/delpolarh.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/delpolarh.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/ops/delpolarh.cpp [ 17%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/delnonpolarh.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/delnonpolarh.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/ops/delnonpolarh.cpp [ 17%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/eqeq.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_charges_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/plugin_charges.dir/charges/eqeq.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/charges/eqeq.cpp [ 17%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/gen2D.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/gen2D.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/ops/gen2D.cpp [ 17%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/fillUC.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/fillUC.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/ops/fillUC.cpp [ 17%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/forcefield.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/forcefield.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/ops/forcefield.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/ops/forcefield.cpp: In member function 'virtual bool OpenBabel::OpMinimize::Do(OpenBabel::OBBase*, const char*, OpenBabel::OBOp::OpMap*, OpenBabel::OBConversion*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/ops/forcefield.cpp:265:10: warning: unused variable 'done' [-Wunused-variable] 265 | bool done = true; | ^~~~ [ 18%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/gen3d.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/gen3d.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/ops/gen3d.cpp [ 18%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/largest.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/largest.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/ops/largest.cpp [ 18%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/loader.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/loader.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/ops/loader.cpp [ 18%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/neutralize.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/neutralize.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/ops/neutralize.cpp [ 18%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/opsplit.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/opsplit.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/ops/opsplit.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/ops/opsplit.cpp: In member function 'virtual bool OpenBabel::OpSplit::Do(OpenBabel::OBBase*, const char*, OpenBabel::OBOp::OpMap*, OpenBabel::OBConversion*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/ops/opsplit.cpp:92:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 92 | if(!pConv) | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/ops/opsplit.cpp:95:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 95 | if(pConv->IsFirstInput()) | ^~ [ 19%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/qeq.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_charges_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/plugin_charges.dir/charges/qeq.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/charges/qeq.cpp [ 20%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/optransform.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/optransform.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/ops/optransform.cpp [ 20%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/partialcharges.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/partialcharges.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/ops/partialcharges.cpp [ 20%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/readconformers.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/readconformers.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/ops/readconformers.cpp [ 20%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/sort.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/sort.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/ops/sort.cpp [ 20%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/opisomorph.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/opisomorph.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/ops/opisomorph.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/ops/opisomorph.cpp: In member function 'virtual bool OpenBabel::OpNewS::Do(OpenBabel::OBBase*, const char*, OpenBabel::OBOp::OpMap*, OpenBabel::OBConversion*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/ops/opisomorph.cpp:303:28: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] 303 | if(pmol->NumHvyAtoms() != nPatternAtoms) | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ [ 21%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/ophighlight.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/ophighlight.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/ops/ophighlight.cpp [ 21%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/xout.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/xout.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/ops/xout.cpp [ 21%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/conformer.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/conformer.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/ops/conformer.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/ops/conformer.cpp: In member function 'virtual bool OpenBabel::OpConformer::Do(OpenBabel::OBBase*, const char*, OpenBabel::OBOp::OpMap*, OpenBabel::OBConversion*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/ops/conformer.cpp:291:19: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 291 | if (p1>pmol->NumAtoms() || p2>pmol->NumAtoms()){ | ~~^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/ops/conformer.cpp:291:42: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 291 | if (p1>pmol->NumAtoms() || p2>pmol->NumAtoms()){ | ~~^~~~~~~~~~~~~~~~~ [ 21%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/opalign.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/opalign.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/ops/opalign.cpp [ 21%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/opconfab.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/opconfab.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/ops/opconfab.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/ops/opconfab.cpp: In member function 'void OpenBabel::OpConfab::Run(OpenBabel::OBConversion*, OpenBabel::OBMol*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/ops/opconfab.cpp:167:14: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] 167 | for (; c < mol.NumConformers(); ++c) { | ~~^~~~~~~~~~~~~~~~~~~~~ [ 22%] Linking CXX shared module ../lib64/plugin_ops.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/plugin_ops.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../lib64/plugin_ops.so CMakeFiles/plugin_ops.dir/ops/addfilename.cpp.o CMakeFiles/plugin_ops.dir/ops/addinindex.cpp.o CMakeFiles/plugin_ops.dir/ops/addpolarh.cpp.o CMakeFiles/plugin_ops.dir/ops/addnonpolarh.cpp.o CMakeFiles/plugin_ops.dir/ops/canonical.cpp.o CMakeFiles/plugin_ops.dir/ops/changecell.cpp.o CMakeFiles/plugin_ops.dir/ops/delpolarh.cpp.o CMakeFiles/plugin_ops.dir/ops/delnonpolarh.cpp.o CMakeFiles/plugin_ops.dir/ops/gen2D.cpp.o CMakeFiles/plugin_ops.dir/ops/fillUC.cpp.o CMakeFiles/plugin_ops.dir/ops/forcefield.cpp.o CMakeFiles/plugin_ops.dir/ops/gen3d.cpp.o CMakeFiles/plugin_ops.dir/ops/largest.cpp.o CMakeFiles/plugin_ops.dir/ops/loader.cpp.o CMakeFiles/plugin_ops.dir/ops/neutralize.cpp.o CMakeFiles/plugin_ops.dir/ops/opsplit.cpp.o CMakeFiles/plugin_ops.dir/ops/optransform.cpp.o CMakeFiles/plugin_ops.dir/ops/partialcharges.cpp.o CMakeFiles/plugin_ops.dir/ops/readconformers.cpp.o CMakeFiles/plugin_ops.dir/ops/sort.cpp.o CMakeFiles/plugin_ops.dir/ops/opisomorph.cpp.o CMakeFiles/plugin_ops.dir/ops/ophighlight.cpp.o CMakeFiles/plugin_ops.dir/ops/xout.cpp.o CMakeFiles/plugin_ops.dir/ops/conformer.cpp.o CMakeFiles/plugin_ops.dir/ops/opalign.cpp.o CMakeFiles/plugin_ops.dir/ops/opconfab.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz ../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread [ 22%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/qtpie.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_charges_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/plugin_charges.dir/charges/qtpie.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/charges/qtpie.cpp gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 22%] Built target plugin_ops /usr/bin/gmake -f src/CMakeFiles/plugin_forcefields.dir/build.make src/CMakeFiles/plugin_forcefields.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/CMakeFiles/plugin_forcefields.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/CMakeFiles/plugin_forcefields.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/CMakeFiles/plugin_forcefields.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/CMakeFiles/plugin_forcefields.dir/depend.internal". Scanning dependencies of target plugin_forcefields gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/CMakeFiles/plugin_forcefields.dir/build.make src/CMakeFiles/plugin_forcefields.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 22%] Building CXX object src/CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldgaff.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_forcefields_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldgaff.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefields/forcefieldgaff.cpp [ 23%] Building CXX object src/CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldghemical.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_forcefields_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldghemical.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefields/forcefieldghemical.cpp [ 23%] Building CXX object src/CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldmmff94.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_forcefields_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldmmff94.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefields/forcefieldmmff94.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefields/forcefieldmmff94.cpp: In member function 'virtual bool OpenBabel::OBForceFieldMMFF94::SetupCalculations()': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefields/forcefieldmmff94.cpp:2798:32: warning: variable 'bondtype1' set but not used [-Wunused-but-set-variable] 2798 | int angletype, strbndtype, bondtype1, bondtype2; | ^~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefields/forcefieldmmff94.cpp:2798:43: warning: variable 'bondtype2' set but not used [-Wunused-but-set-variable] 2798 | int angletype, strbndtype, bondtype1, bondtype2; | ^~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefields/forcefieldmmff94.cpp: In instantiation of 'double OpenBabel::OBForceFieldMMFF94::E_Bond() [with bool = true]': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefields/forcefieldmmff94.h:289:41: required from here /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefields/forcefieldmmff94.cpp:148:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 148 | for (int i = 0; i < _bondcalculations.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefields/forcefieldmmff94.cpp: In instantiation of 'double OpenBabel::OBForceFieldMMFF94::E_Bond() [with bool = false]': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefields/forcefieldmmff94.h:289:59: required from here /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefields/forcefieldmmff94.cpp:148:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefields/forcefieldmmff94.cpp: In instantiation of 'double OpenBabel::OBForceFieldMMFF94::E_Angle() [with bool = true]': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefields/forcefieldmmff94.h:295:42: required from here /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefields/forcefieldmmff94.cpp:263:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 263 | for (int i = 0; i < _anglecalculations.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefields/forcefieldmmff94.cpp: In instantiation of 'double OpenBabel::OBForceFieldMMFF94::E_Angle() [with bool = false]': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefields/forcefieldmmff94.h:295:61: required from here /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefields/forcefieldmmff94.cpp:263:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefields/forcefieldmmff94.cpp: In instantiation of 'double OpenBabel::OBForceFieldMMFF94::E_StrBnd() [with bool = true]': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefields/forcefieldmmff94.h:301:43: required from here /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefields/forcefieldmmff94.cpp:376:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 376 | for (int i = 0; i < _strbndcalculations.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefields/forcefieldmmff94.cpp: In instantiation of 'double OpenBabel::OBForceFieldMMFF94::E_StrBnd() [with bool = false]': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefields/forcefieldmmff94.h:301:63: required from here /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefields/forcefieldmmff94.cpp:376:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefields/forcefieldmmff94.cpp: In instantiation of 'double OpenBabel::OBForceFieldMMFF94::E_Torsion() [with bool = true]': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefields/forcefieldmmff94.h:307:44: required from here /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefields/forcefieldmmff94.cpp:512:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 512 | for (int i = 0; i < _torsioncalculations.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefields/forcefieldmmff94.cpp: In instantiation of 'double OpenBabel::OBForceFieldMMFF94::E_Torsion() [with bool = false]': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefields/forcefieldmmff94.h:307:65: required from here /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefields/forcefieldmmff94.cpp:512:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefields/forcefieldmmff94.cpp: In instantiation of 'double OpenBabel::OBForceFieldMMFF94::E_OOP() [with bool = true]': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefields/forcefieldmmff94.h:313:40: required from here /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefields/forcefieldmmff94.cpp:610:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 610 | for (int i = 0; i < _oopcalculations.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefields/forcefieldmmff94.cpp: In instantiation of 'double OpenBabel::OBForceFieldMMFF94::E_OOP() [with bool = false]': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefields/forcefieldmmff94.h:313:57: required from here /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefields/forcefieldmmff94.cpp:610:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefields/forcefieldmmff94.cpp: In instantiation of 'double OpenBabel::OBForceFieldMMFF94::E_VDW() [with bool = true]': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefields/forcefieldmmff94.h:319:40: required from here /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefields/forcefieldmmff94.cpp:707:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 707 | for (int i = 0; i < _vdwcalculations.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefields/forcefieldmmff94.cpp: In instantiation of 'double OpenBabel::OBForceFieldMMFF94::E_VDW() [with bool = false]': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefields/forcefieldmmff94.h:319:57: required from here /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefields/forcefieldmmff94.cpp:707:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefields/forcefieldmmff94.cpp: In instantiation of 'double OpenBabel::OBForceFieldMMFF94::E_Electrostatic() [with bool = true]': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefields/forcefieldmmff94.h:325:50: required from here /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefields/forcefieldmmff94.cpp:793:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 793 | for (int i = 0; i < _electrostaticcalculations.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefields/forcefieldmmff94.cpp: In instantiation of 'double OpenBabel::OBForceFieldMMFF94::E_Electrostatic() [with bool = false]': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefields/forcefieldmmff94.h:325:77: required from here /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefields/forcefieldmmff94.cpp:793:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefields/forcefieldmmff94.cpp: In member function 'OpenBabel::OBForceFieldMMFF94::PerceiveAromatic()': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefields/forcefieldmmff94.cpp:1451:30: warning: 'first_rj' may be used uninitialized in this function [-Wmaybe-uninitialized] 1451 | ringbond = _mol.GetBond(first_rj, index); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefields/forcefieldmmff94.cpp:1451:30: warning: 'index' may be used uninitialized in this function [-Wmaybe-uninitialized] [ 23%] Linking CXX shared module ../lib64/plugin_charges.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/plugin_charges.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../lib64/plugin_charges.so CMakeFiles/plugin_charges.dir/charges/eem.cpp.o CMakeFiles/plugin_charges.dir/charges/gasteiger.cpp.o CMakeFiles/plugin_charges.dir/charges/none.cpp.o CMakeFiles/plugin_charges.dir/charges/mmff94.cpp.o CMakeFiles/plugin_charges.dir/charges/fromfile.cpp.o CMakeFiles/plugin_charges.dir/charges/eqeq.cpp.o CMakeFiles/plugin_charges.dir/charges/qeq.cpp.o CMakeFiles/plugin_charges.dir/charges/qtpie.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz ../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread [ 23%] Building CXX object src/CMakeFiles/plugin_forcefields.dir/forcefields/forcefielduff.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_forcefields_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/plugin_forcefields.dir/forcefields/forcefielduff.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefields/forcefielduff.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefields/forcefielduff.cpp: In instantiation of 'void OpenBabel::OBFFVDWCalculationUFF::Compute() [with bool = true]': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefields/forcefielduff.cpp:478:37: required from 'double OpenBabel::OBForceFieldUFF::E_VDW() [with bool = true]' /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefields/forcefielduff.h:193:38: required from here /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefields/forcefielduff.cpp:431:14: warning: unused variable 'ab' [-Wunused-variable] 431 | double ab[3]; | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefields/forcefielduff.cpp: In instantiation of 'void OpenBabel::OBFFVDWCalculationUFF::Compute() [with bool = false]': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefields/forcefielduff.cpp:478:37: required from 'double OpenBabel::OBForceFieldUFF::E_VDW() [with bool = false]' /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefields/forcefielduff.h:193:55: required from here /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/forcefields/forcefielduff.cpp:431:14: warning: unused variable 'ab' [-Wunused-variable] [ 23%] Linking CXX shared module ../lib64/plugin_forcefields.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/plugin_forcefields.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../lib64/plugin_forcefields.so CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldgaff.cpp.o CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldghemical.cpp.o CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldmmff94.cpp.o CMakeFiles/plugin_forcefields.dir/forcefields/forcefielduff.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz ../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 23%] Built target plugin_charges /usr/bin/gmake -f src/CMakeFiles/plugin_fingerprints.dir/build.make src/CMakeFiles/plugin_fingerprints.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/CMakeFiles/plugin_fingerprints.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/CMakeFiles/plugin_fingerprints.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/CMakeFiles/plugin_fingerprints.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/CMakeFiles/plugin_fingerprints.dir/depend.internal". Scanning dependencies of target plugin_fingerprints gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/CMakeFiles/plugin_fingerprints.dir/build.make src/CMakeFiles/plugin_fingerprints.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 24%] Building CXX object src/CMakeFiles/plugin_fingerprints.dir/fingerprints/finger2.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_fingerprints_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/plugin_fingerprints.dir/fingerprints/finger2.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/fingerprints/finger2.cpp gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 24%] Built target plugin_forcefields /usr/bin/gmake -f src/CMakeFiles/plugin_descriptors.dir/build.make src/CMakeFiles/plugin_descriptors.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/CMakeFiles/plugin_descriptors.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/CMakeFiles/plugin_descriptors.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/CMakeFiles/plugin_descriptors.dir/depend.internal". 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Scanning dependencies of target plugin_descriptors gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/CMakeFiles/plugin_descriptors.dir/build.make src/CMakeFiles/plugin_descriptors.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 24%] Building CXX object src/CMakeFiles/plugin_descriptors.dir/descriptors/cansmidescriptor.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_descriptors_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/plugin_descriptors.dir/descriptors/cansmidescriptor.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/descriptors/cansmidescriptor.cpp [ 24%] Building CXX object src/CMakeFiles/plugin_fingerprints.dir/fingerprints/finger3.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_fingerprints_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic 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-isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/plugin_descriptors.dir/descriptors/cmpdfilter.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/descriptors/cmpdfilter.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/fingerprints/finger3.cpp: In member function 'virtual bool OpenBabel::PatternFP::GetFingerprint(OpenBabel::OBBase*, std::vector&, int)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/fingerprints/finger3.cpp:109:13: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] 109 | while(n < _bitcount) | ~~^~~~~~~~~~~ [ 25%] Building CXX object src/CMakeFiles/plugin_descriptors.dir/descriptors/groupcontrib.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_descriptors_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/plugin_descriptors.dir/descriptors/groupcontrib.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/descriptors/groupcontrib.cpp [ 25%] Building CXX object src/CMakeFiles/plugin_fingerprints.dir/fingerprints/fingerecfp.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_fingerprints_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/plugin_fingerprints.dir/fingerprints/fingerecfp.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/fingerprints/fingerecfp.cpp [ 25%] Building CXX object src/CMakeFiles/plugin_descriptors.dir/descriptors/filters.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_descriptors_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/plugin_descriptors.dir/descriptors/filters.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/descriptors/filters.cpp [ 25%] Linking CXX shared module ../lib64/plugin_fingerprints.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/plugin_fingerprints.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../lib64/plugin_fingerprints.so CMakeFiles/plugin_fingerprints.dir/fingerprints/finger2.cpp.o CMakeFiles/plugin_fingerprints.dir/fingerprints/finger3.cpp.o CMakeFiles/plugin_fingerprints.dir/fingerprints/fingerecfp.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz ../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread [ 25%] Building CXX object src/CMakeFiles/plugin_descriptors.dir/descriptors/inchidescriptor.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_descriptors_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/plugin_descriptors.dir/descriptors/inchidescriptor.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/descriptors/inchidescriptor.cpp In file included from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/descriptors/inchidescriptor.cpp:24: /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/inchiformat.h: In member function 'bool OpenBabel::InChIFormat::InchiLess::operator()(const string&, const string&) const': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/inchiformat.h:149:13: warning: this 'while' clause does not guard... [-Wmisleading-indentation] 149 | while(p1!=s1.end() && isdigit(*p1++)); --p1; | ^~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/inchiformat.h:149:52: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'while' 149 | while(p1!=s1.end() && isdigit(*p1++)); --p1; | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/inchiformat.h:154:13: warning: this 'while' clause does not guard... [-Wmisleading-indentation] 154 | while(p2!=s2.end() && isdigit(*p2++)); --p2; | ^~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/inchiformat.h:154:52: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'while' 154 | while(p2!=s2.end() && isdigit(*p2++)); --p2; | ^~ [ 25%] Building CXX object src/CMakeFiles/plugin_descriptors.dir/descriptors/smartsdescriptors.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_descriptors_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/plugin_descriptors.dir/descriptors/smartsdescriptors.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/descriptors/smartsdescriptors.cpp gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 25%] Built target plugin_fingerprints /usr/bin/gmake -f src/formats/CMakeFiles/cacaoformat.dir/build.make src/formats/CMakeFiles/cacaoformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/cacaoformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/cacaoformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/cacaoformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/cacaoformat.dir/depend.internal". Scanning dependencies of target cacaoformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/cacaoformat.dir/build.make src/formats/CMakeFiles/cacaoformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 25%] Building CXX object src/formats/CMakeFiles/cacaoformat.dir/cacaoformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcacaoformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/cacaoformat.dir/cacaoformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/cacaoformat.cpp [ 25%] Linking CXX shared module ../lib64/plugin_descriptors.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/plugin_descriptors.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../lib64/plugin_descriptors.so CMakeFiles/plugin_descriptors.dir/descriptors/cansmidescriptor.cpp.o CMakeFiles/plugin_descriptors.dir/descriptors/cmpdfilter.cpp.o CMakeFiles/plugin_descriptors.dir/descriptors/groupcontrib.cpp.o CMakeFiles/plugin_descriptors.dir/descriptors/filters.cpp.o CMakeFiles/plugin_descriptors.dir/descriptors/inchidescriptor.cpp.o CMakeFiles/plugin_descriptors.dir/descriptors/smartsdescriptors.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz ../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread [ 25%] Linking CXX shared module ../../lib64/cacaoformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cacaoformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/cacaoformat.so CMakeFiles/cacaoformat.dir/cacaoformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 25%] Built target plugin_descriptors /usr/bin/gmake -f src/formats/CMakeFiles/mdffformat.dir/build.make src/formats/CMakeFiles/mdffformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/mdffformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/mdffformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/mdffformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/mdffformat.dir/depend.internal". Scanning dependencies of target mdffformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/mdffformat.dir/build.make src/formats/CMakeFiles/mdffformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 25%] Building CXX object src/formats/CMakeFiles/mdffformat.dir/mdffformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dmdffformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/mdffformat.dir/mdffformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/mdffformat.cpp gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 25%] Built target cacaoformat /usr/bin/gmake -f src/formats/CMakeFiles/acrformat.dir/build.make src/formats/CMakeFiles/acrformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/acrformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/acrformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/acrformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/acrformat.dir/depend.internal". Scanning dependencies of target acrformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/acrformat.dir/build.make src/formats/CMakeFiles/acrformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 26%] Building CXX object src/formats/CMakeFiles/acrformat.dir/acrformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dacrformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/acrformat.dir/acrformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/acrformat.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/mdffformat.cpp: In member function 'virtual bool OpenBabel::MDFFFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/mdffformat.cpp:249:30: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 249 | for(int i = 0; i < atom_t_prop.size(); i++) | ~~^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/mdffformat.cpp:270:33: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] 270 | for(unsigned int j = 0; j < atom_t_prop[i].num_of_atoms; j++) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/mdffformat.cpp: In member function 'bool OpenBabel::aindx::operator<(const OpenBabel::aindx&) const': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/mdffformat.cpp:329:24: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 329 | for(int i = 0; i < vs.size(); i++) | ~~^~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/mdffformat.cpp: In member function 'virtual bool OpenBabel::MDFFFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/mdffformat.cpp:388:24: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 388 | for(int i = 0; i < vs.size(); i++) | ~~^~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/mdffformat.cpp:443:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, unsigned int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 443 | for (int i = 0; i < atypes_def.size(); i++) | ~~^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/mdffformat.cpp:450:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, unsigned int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 450 | for (int i = 0; i < atypes_def.size(); i++) | ~~^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/mdffformat.cpp:500:24: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, unsigned int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 500 | for(int j = 0; j < atypes_def.size(); j++) | ~~^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/acrformat.cpp: In member function 'OpenBabel::ACRFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/acrformat.cpp:140:40: warning: 'scale' may be used uninitialized in this function [-Wmaybe-uninitialized] 140 | X = atof((char*)vs[6].c_str())/scale; | ^~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/acrformat.cpp:162:5: warning: 'bonds' may be used uninitialized in this function [-Wmaybe-uninitialized] 162 | if ( pmol->NumBonds() != bonds ) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/acrformat.cpp:166:12: warning: 'atoms' may be used uninitialized in this function [-Wmaybe-uninitialized] 166 | } else if ( pmol->NumAtoms() != atoms ) { | ^~ [ 26%] Linking CXX shared module ../../lib64/acrformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/acrformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/acrformat.so CMakeFiles/acrformat.dir/acrformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 26%] Built target acrformat /usr/bin/gmake -f src/formats/CMakeFiles/balstformat.dir/build.make src/formats/CMakeFiles/balstformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/balstformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/balstformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/balstformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/balstformat.dir/depend.internal". Scanning dependencies of target balstformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/balstformat.dir/build.make src/formats/CMakeFiles/balstformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 26%] Building CXX object src/formats/CMakeFiles/balstformat.dir/balstformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dbalstformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/balstformat.dir/balstformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/balstformat.cpp [ 26%] Linking CXX shared module ../../lib64/balstformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/balstformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/balstformat.so CMakeFiles/balstformat.dir/balstformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 26%] Built target balstformat /usr/bin/gmake -f src/formats/CMakeFiles/MCDLformat.dir/build.make src/formats/CMakeFiles/MCDLformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/MCDLformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/MCDLformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/MCDLformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/MCDLformat.dir/depend.internal". Scanning dependencies of target MCDLformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/MCDLformat.dir/build.make src/formats/CMakeFiles/MCDLformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 27%] Building CXX object src/formats/CMakeFiles/MCDLformat.dir/MCDLformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMCDLformat_EXPORTS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/MCDLformat.dir/MCDLformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/MCDLformat.cpp [ 28%] Linking CXX shared module ../../lib64/mdffformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdffformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/mdffformat.so CMakeFiles/mdffformat.dir/mdffformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/MCDLformat.cpp: In member function 'void OpenBabel::MCDLFormat::solve(int, int (*)[4], int)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/MCDLformat.cpp:283:9: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 283 | if (jflag) | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/MCDLformat.cpp:287:13: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 287 | nt = 1; | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/MCDLformat.cpp: In member function 'void OpenBabel::MCDLFormat::setMCDL(std::string, OpenBabel::OBMol*, std::string&)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/MCDLformat.cpp:1267:15: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 1267 | if (nPrev == acount) { | ~~~~~~^~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/MCDLformat.cpp: In member function 'int OpenBabel::MCDLFormat::indexOf(std::string, std::string, int)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/MCDLformat.cpp:1385:16: warning: comparison of integer expressions of different signedness: 'int' and 'const size_type' {aka 'const long unsigned int'} [-Wsign-compare] 1385 | if (result == string::npos) result=-1; | ~~~~~~~^~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/MCDLformat.cpp:1386:16: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string::size_type' {aka 'long unsigned int'} [-Wsign-compare] 1386 | if (result >= instring.length()) result=-1; | ~~~~~~~^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/MCDLformat.cpp: In member function 'int OpenBabel::MCDLFormat::lastIndexOf(std::string, std::string)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/MCDLformat.cpp:1399:11: warning: comparison of integer expressions of different signedness: 'int' and 'const size_type' {aka 'const long unsigned int'} [-Wsign-compare] 1399 | if (n == string::npos) | ~~^~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/MCDLformat.cpp: In member function 'OpenBabel::MCDLFormat::solve(int, int (*) [4], int)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/MCDLformat.cpp:400:22: warning: 'dupfrag' may be used uninitialized in this function [-Wmaybe-uninitialized] 400 | else if (ix[i] == dupfrag && j != dupnum) | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/MCDLformat.cpp:399:35: warning: 'jump' may be used uninitialized in this function [-Wmaybe-uninitialized] 399 | ix[i] = mx[i] + jump + 1; | ~~~~~~^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/MCDLformat.cpp:390:24: warning: 'numdups' may be used uninitialized in this function [-Wmaybe-uninitialized] 390 | for (j=0; j >::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare] 348 | while(vs.size() == nColumn+1) { | ~~~~~~~~~~^~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/orcaformat.cpp:363:48: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] 363 | for (unsigned int i = 0; i < nColumn; i++) { | ~~^~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/orcaformat.cpp:375:44: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] 375 | for (unsigned int i = 0; i < nColumn; i++) { | ~~^~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/orcaformat.cpp:131:12: warning: unused variable 'energy' [-Wunused-variable] 131 | double energy=0; | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/orcaformat.cpp:138:9: warning: variable 'nModeAll' set but not used [-Wunused-but-set-variable] 138 | int nModeAll = 0; | ^~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/orcaformat.cpp:220:36: warning: 'atom' may be used uninitialized in this function [-Wmaybe-uninitialized] 220 | atom->SetVector(x,y,z); //set atom coordinates | ~~~~~~~~~~~~~~~^~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/orcaformat.cpp:217:37: warning: 'confCoords' may be used uninitialized in this function [-Wmaybe-uninitialized] 217 | confCoords[i*3+2] = z; | ^ [ 28%] Linking CXX shared module ../../lib64/orcaformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/orcaformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/orcaformat.so CMakeFiles/orcaformat.dir/orcaformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 28%] Built target MCDLformat /usr/bin/gmake -f src/formats/CMakeFiles/zindoformat.dir/build.make src/formats/CMakeFiles/zindoformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/zindoformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/zindoformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/zindoformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/zindoformat.dir/depend.internal". Scanning dependencies of target zindoformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/zindoformat.dir/build.make src/formats/CMakeFiles/zindoformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 28%] Building CXX object src/formats/CMakeFiles/zindoformat.dir/zindoformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dzindoformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/zindoformat.dir/zindoformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/zindoformat.cpp gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 28%] Built target orcaformat /usr/bin/gmake -f src/formats/CMakeFiles/xsfformat.dir/build.make src/formats/CMakeFiles/xsfformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/xsfformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/xsfformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/xsfformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/xsfformat.dir/depend.internal". Scanning dependencies of target xsfformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/xsfformat.dir/build.make src/formats/CMakeFiles/xsfformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 28%] Building CXX object src/formats/CMakeFiles/xsfformat.dir/xsfformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dxsfformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/xsfformat.dir/xsfformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/xsfformat.cpp [ 29%] Linking CXX shared module ../../lib64/zindoformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/zindoformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/zindoformat.so CMakeFiles/zindoformat.dir/zindoformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 29%] Built target zindoformat /usr/bin/gmake -f src/formats/CMakeFiles/gausscubeformat.dir/build.make src/formats/CMakeFiles/gausscubeformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/gausscubeformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/gausscubeformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/gausscubeformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/gausscubeformat.dir/depend.internal". Scanning dependencies of target gausscubeformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/gausscubeformat.dir/build.make src/formats/CMakeFiles/gausscubeformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 29%] Building CXX object src/formats/CMakeFiles/gausscubeformat.dir/gausscubeformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dgausscubeformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/gausscubeformat.dir/gausscubeformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/gausscubeformat.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/gausscubeformat.cpp: In member function 'virtual bool OpenBabel::OBGaussianCubeFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/gausscubeformat.cpp:432:25: warning: comparison of integer expressions of different signedness: 'std::vector::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare] 432 | while (vgd.size() < nCubes) | ~~~~~~~~~~~^~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/gausscubeformat.cpp:479:26: warning: comparison of integer expressions of different signedness: 'std::vector::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare] 479 | while (values.size() < n*nCubes) | ~~~~~~~~~~~~~~^~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/gausscubeformat.cpp:114:17: warning: unused variable 'title' [-Wunused-variable] 114 | const char* title = pConv->GetTitle(); | ^~~~~ [ 29%] Linking CXX shared module ../../lib64/xsfformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/xsfformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/xsfformat.so CMakeFiles/xsfformat.dir/xsfformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 29%] Built target xsfformat /usr/bin/gmake -f src/formats/CMakeFiles/qchemformat.dir/build.make src/formats/CMakeFiles/qchemformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/qchemformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/qchemformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/qchemformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/qchemformat.dir/depend.internal". Scanning dependencies of target qchemformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/qchemformat.dir/build.make src/formats/CMakeFiles/qchemformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 29%] Building CXX object src/formats/CMakeFiles/qchemformat.dir/qchemformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dqchemformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/qchemformat.dir/qchemformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/qchemformat.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/qchemformat.cpp: In member function 'virtual bool OpenBabel::QChemOutputFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/qchemformat.cpp:194:28: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 194 | if (nbAtomRead != mol.NumAtoms()) | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~ [ 29%] Linking CXX shared module ../../lib64/gausscubeformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/gausscubeformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/gausscubeformat.so CMakeFiles/gausscubeformat.dir/gausscubeformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread [ 29%] Linking CXX shared module ../../lib64/qchemformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/qchemformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/qchemformat.so CMakeFiles/qchemformat.dir/qchemformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 29%] Built target gausscubeformat /usr/bin/gmake -f src/formats/CMakeFiles/crkformat.dir/build.make src/formats/CMakeFiles/crkformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/crkformat.dir/DependInfo.cmake --color= Dependee 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Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/crkformat.dir/depend.internal". Scanning dependencies of target crkformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/crkformat.dir/build.make src/formats/CMakeFiles/crkformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 29%] Building CXX object src/formats/CMakeFiles/crkformat.dir/crkformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcrkformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/crkformat.dir/crkformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/crkformat.cpp gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 29%] Built target qchemformat /usr/bin/gmake -f src/formats/CMakeFiles/mmodformat.dir/build.make src/formats/CMakeFiles/mmodformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/mmodformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/mmodformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/mmodformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/mmodformat.dir/depend.internal". Scanning dependencies of target mmodformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/mmodformat.dir/build.make src/formats/CMakeFiles/mmodformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 30%] Building CXX object src/formats/CMakeFiles/mmodformat.dir/mmodformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dmmodformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/mmodformat.dir/mmodformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/mmodformat.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/crkformat.cpp: In function 'OpenBabel::CRK2DFormat::ReadCRK(std::basic_istream >&, OpenBabel::OBMol&, char const*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/crkformat.cpp:309:38: warning: 'bondStyle' may be used uninitialized in this function [-Wmaybe-uninitialized] 309 | stbondStyle[numBonds]=bondStyle; | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/crkformat.cpp:307:35: warning: 'bondTo' may be used uninitialized in this function [-Wmaybe-uninitialized] 307 | stbondTo[numBonds]=bondTo; | ~~~~~~~~~~~~~~~~~~^~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/crkformat.cpp:306:37: warning: 'bondFrom' may be used uninitialized in this function [-Wmaybe-uninitialized] 306 | stbondFrom[numBonds]=bondFrom; | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/crkformat.cpp:292:36: warning: 'atomCharge' may be used uninitialized in this function [-Wmaybe-uninitialized] 292 | atm.SetFormalCharge((int)atomCharge); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/crkformat.cpp:291:30: warning: 'atomZ' may be used uninitialized in this function [-Wmaybe-uninitialized] 291 | atm.SetVector(atomX,atomY,atomZ); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/crkformat.cpp:291:30: warning: 'atomY' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/crkformat.cpp:291:30: warning: 'atomX' may be used uninitialized in this function [-Wmaybe-uninitialized] In file included from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/crkformat.cpp:18: /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/atom.h:136:52: warning: 'atomNumber' may be used uninitialized in this function [-Wmaybe-uninitialized] 136 | void SetAtomicNum(int atomicnum) { _ele = (char)atomicnum; } | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/crkformat.cpp:246:16: note: 'atomNumber' was declared here 246 | int atomID,atomNumber; | ^~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/crkformat.cpp:288:37: warning: 'atomID' may be used uninitialized in this function [-Wmaybe-uninitialized] 288 | statomID[numAtoms++]=atomID; | ~~~~~~~~~~~~~~~~~~~~^~~~~~~ [ 30%] Linking CXX shared module ../../lib64/crkformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/crkformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/crkformat.so CMakeFiles/crkformat.dir/crkformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 30%] Built target crkformat /usr/bin/gmake -f src/formats/CMakeFiles/amberformat.dir/build.make src/formats/CMakeFiles/amberformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/amberformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/amberformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/amberformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/amberformat.dir/depend.internal". Scanning dependencies of target amberformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/amberformat.dir/build.make src/formats/CMakeFiles/amberformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 30%] Building CXX object src/formats/CMakeFiles/amberformat.dir/amberformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Damberformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/amberformat.dir/amberformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/amberformat.cpp [ 30%] Linking CXX shared module ../../lib64/mmodformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mmodformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/mmodformat.so CMakeFiles/mmodformat.dir/mmodformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 30%] Built target mmodformat /usr/bin/gmake -f src/formats/CMakeFiles/titleformat.dir/build.make src/formats/CMakeFiles/titleformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/titleformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/titleformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/titleformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/titleformat.dir/depend.internal". Scanning dependencies of target titleformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/titleformat.dir/build.make src/formats/CMakeFiles/titleformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 31%] Building CXX object src/formats/CMakeFiles/titleformat.dir/titleformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dtitleformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/titleformat.dir/titleformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/titleformat.cpp [ 31%] Linking CXX shared module ../../lib64/amberformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/amberformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/amberformat.so CMakeFiles/amberformat.dir/amberformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 31%] Built target amberformat /usr/bin/gmake -f src/formats/CMakeFiles/acesformat.dir/build.make src/formats/CMakeFiles/acesformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/acesformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/acesformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/acesformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/acesformat.dir/depend.internal". Scanning dependencies of target acesformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/acesformat.dir/build.make src/formats/CMakeFiles/acesformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 31%] Building CXX object src/formats/CMakeFiles/acesformat.dir/acesformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dacesformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/acesformat.dir/acesformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/acesformat.cpp [ 31%] Linking CXX shared module ../../lib64/titleformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/titleformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/titleformat.so CMakeFiles/titleformat.dir/titleformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 31%] Built target titleformat /usr/bin/gmake -f src/formats/CMakeFiles/CSRformat.dir/build.make src/formats/CMakeFiles/CSRformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CSRformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CSRformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CSRformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CSRformat.dir/depend.internal". Scanning dependencies of target CSRformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/CSRformat.dir/build.make src/formats/CMakeFiles/CSRformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 31%] Building CXX object src/formats/CMakeFiles/CSRformat.dir/CSRformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DCSRformat_EXPORTS -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/CSRformat.dir/CSRformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/CSRformat.cpp In file included from /usr/include/string.h:519, from /usr/include/c++/10/cstring:42, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/plugin.h:29, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/format.h:22, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/obconversion.h:37, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/obmolecformat.h:36, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/CSRformat.cpp:17: In function 'strncpy', inlined from 'OpenBabel::CSRFormat::PadString(char*, int)' at /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/CSRformat.cpp:192:12: /usr/include/bits/string_fortified.h:106:34: warning: 'strncpy' output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/CSRformat.cpp: In member function 'OpenBabel::CSRFormat::PadString(char*, int)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/CSRformat.cpp:192:12: note: length computed here 192 | strncpy(output, input, strlen(input)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 31%] Linking CXX shared module ../../lib64/CSRformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/CSRformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/CSRformat.so CMakeFiles/CSRformat.dir/CSRformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread In function 'strncpy', inlined from 'PadString' at /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/CSRformat.cpp:192:12: /usr/include/bits/string_fortified.h:106:34: warning: '__builtin_strncpy' specified bound depends on the length of the source argument [-Wstringop-overflow=] 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/CSRformat.cpp: In member function 'PadString': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/CSRformat.cpp:192:12: note: length computed here 192 | strncpy(output, input, strlen(input)); | ^ gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 31%] Built target CSRformat /usr/bin/gmake -f src/formats/CMakeFiles/moldenformat.dir/build.make src/formats/CMakeFiles/moldenformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/moldenformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/moldenformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/moldenformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/moldenformat.dir/depend.internal". Scanning dependencies of target moldenformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/moldenformat.dir/build.make src/formats/CMakeFiles/moldenformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 31%] Building CXX object src/formats/CMakeFiles/moldenformat.dir/moldenformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dmoldenformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/moldenformat.dir/moldenformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/moldenformat.cpp [ 31%] Linking CXX shared module ../../lib64/acesformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/acesformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/acesformat.so CMakeFiles/acesformat.dir/acesformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 31%] Built target acesformat /usr/bin/gmake -f src/formats/CMakeFiles/bgfformat.dir/build.make src/formats/CMakeFiles/bgfformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/bgfformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/bgfformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/bgfformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/bgfformat.dir/depend.internal". Scanning dependencies of target bgfformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/bgfformat.dir/build.make src/formats/CMakeFiles/bgfformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 32%] Building CXX object src/formats/CMakeFiles/bgfformat.dir/bgfformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dbgfformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/bgfformat.dir/bgfformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/bgfformat.cpp [ 33%] Linking CXX shared module ../../lib64/moldenformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/moldenformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/moldenformat.so CMakeFiles/moldenformat.dir/moldenformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread [ 33%] Linking CXX shared module ../../lib64/bgfformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/bgfformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/bgfformat.so CMakeFiles/bgfformat.dir/bgfformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 33%] Built target bgfformat /usr/bin/gmake -f src/formats/CMakeFiles/mopacformat.dir/build.make src/formats/CMakeFiles/mopacformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats 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Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/mopacformat.dir/depend.internal". Scanning dependencies of target mopacformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/mopacformat.dir/build.make src/formats/CMakeFiles/mopacformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 34%] Building CXX object src/formats/CMakeFiles/mopacformat.dir/mopacformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dmopacformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/mopacformat.dir/mopacformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/mopacformat.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/mopacformat.cpp: In member function 'virtual bool OpenBabel::MOPACCARTFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/mopacformat.cpp:650:19: warning: variable 'isotopeMass' set but not used [-Wunused-but-set-variable] 650 | double x,y,z, isotopeMass; | ^~~~~~~~~~~ gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 34%] Built target moldenformat /usr/bin/gmake -f src/formats/CMakeFiles/xyzformat.dir/build.make src/formats/CMakeFiles/xyzformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/xyzformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/xyzformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/xyzformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/xyzformat.dir/depend.internal". Scanning dependencies of target xyzformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/xyzformat.dir/build.make src/formats/CMakeFiles/xyzformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 35%] Building CXX object src/formats/CMakeFiles/xyzformat.dir/xyzformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dxyzformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/xyzformat.dir/xyzformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/xyzformat.cpp [ 35%] Linking CXX shared module ../../lib64/xyzformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/xyzformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/xyzformat.so CMakeFiles/xyzformat.dir/xyzformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/mopacformat.cpp: In member function 'OpenBabel::MOPACFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/mopacformat.cpp:81:14: warning: 'y' may be used uninitialized in this function [-Wmaybe-uninitialized] 81 | double x,y,z; | ^ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/mopacformat.cpp:81:12: warning: 'x' may be used uninitialized in this function [-Wmaybe-uninitialized] 81 | double x,y,z; | ^ gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 35%] Built target xyzformat /usr/bin/gmake -f src/formats/CMakeFiles/jaguarformat.dir/build.make src/formats/CMakeFiles/jaguarformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/jaguarformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/jaguarformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/jaguarformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/jaguarformat.dir/depend.internal". Scanning dependencies of target jaguarformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/jaguarformat.dir/build.make src/formats/CMakeFiles/jaguarformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 35%] Building CXX object src/formats/CMakeFiles/jaguarformat.dir/jaguarformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Djaguarformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/jaguarformat.dir/jaguarformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/jaguarformat.cpp [ 35%] Linking CXX shared module ../../lib64/mopacformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mopacformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/mopacformat.so CMakeFiles/mopacformat.dir/mopacformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread [ 35%] Linking CXX shared module ../../lib64/jaguarformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/jaguarformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/jaguarformat.so CMakeFiles/jaguarformat.dir/jaguarformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 35%] Built target jaguarformat /usr/bin/gmake -f src/formats/CMakeFiles/mol2format.dir/build.make src/formats/CMakeFiles/mol2format.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats 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Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/mol2format.dir/depend.internal". Scanning dependencies of target mol2format gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/mol2format.dir/build.make src/formats/CMakeFiles/mol2format.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 35%] Building CXX object src/formats/CMakeFiles/mol2format.dir/mol2format.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dmol2format_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/mol2format.dir/mol2format.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/mol2format.cpp gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 35%] Built target mopacformat /usr/bin/gmake -f src/formats/CMakeFiles/hinformat.dir/build.make src/formats/CMakeFiles/hinformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/hinformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/hinformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/hinformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/hinformat.dir/depend.internal". Scanning dependencies of target hinformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/hinformat.dir/build.make src/formats/CMakeFiles/hinformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 35%] Building CXX object src/formats/CMakeFiles/hinformat.dir/hinformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dhinformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/hinformat.dir/hinformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/hinformat.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/mol2format.cpp: In member function 'virtual bool OpenBabel::MOL2Format::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/mol2format.cpp:422:22: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 422 | if(aid <= mol.NumAtoms()) | ~~~~^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/mol2format.cpp: In member function 'virtual int OpenBabel::MOL2Format::SkipObjects(int, OpenBabel::OBConversion*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/mol2format.cpp:785:10: warning: unused variable 'ch' [-Wunused-variable] 785 | char ch = ifs.peek(); | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/mol2format.cpp: At global scope: /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/mol2format.cpp:86:15: warning: 'bool OpenBabel::IsThiocarboxylSulfur(OpenBabel::OBAtom*)' defined but not used [-Wunused-function] 86 | static bool IsThiocarboxylSulfur(OBAtom* queryatom) | ^~~~~~~~~~~~~~~~~~~~ [ 35%] Linking CXX shared module ../../lib64/hinformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/hinformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/hinformat.so CMakeFiles/hinformat.dir/hinformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/mol2format.cpp: In member function 'OpenBabel::MOL2Format::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/mol2format.cpp:720:40: warning: '%-6s' directive output may be truncated writing between 6 and 32767 bytes into a region of size between 32756 and 32760 [-Wformat-truncation=] 720 | snprintf(buffer,BUFF_SIZE,"%7d %-6s %9.4f %9.4f %9.4f %-5s %3s %-8s %9.4f", | ^~~~ 721 | atom->GetIdx(),label, | ~~~~~ In file included from /usr/include/stdio.h:866, from /usr/include/c++/10/cstdio:42, from /usr/include/c++/10/ext/string_conversions.h:43, from /usr/include/c++/10/bits/basic_string.h:6545, from /usr/include/c++/10/string:55, from /usr/include/c++/10/bits/locale_classes.h:40, from /usr/include/c++/10/bits/ios_base.h:41, from /usr/include/c++/10/ios:42, from /usr/include/c++/10/ostream:38, from /usr/include/c++/10/iostream:39, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/obconversion.h:24, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/obmolecformat.h:36, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/mol2format.cpp:17: /usr/include/bits/stdio2.h:70:35: note: '__snprintf_chk' output 77 or more bytes (assuming 32838) into a destination of size 32768 70 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 35%] Built target hinformat /usr/bin/gmake -f src/formats/CMakeFiles/gausszmatformat.dir/build.make src/formats/CMakeFiles/gausszmatformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/gausszmatformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/gausszmatformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/gausszmatformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/gausszmatformat.dir/depend.internal". Scanning dependencies of target gausszmatformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/gausszmatformat.dir/build.make src/formats/CMakeFiles/gausszmatformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 35%] Building CXX object src/formats/CMakeFiles/gausszmatformat.dir/gausszmatformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dgausszmatformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/gausszmatformat.dir/gausszmatformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/gausszmatformat.cpp [ 35%] Linking CXX shared module ../../lib64/mol2format.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mol2format.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/mol2format.so CMakeFiles/mol2format.dir/mol2format.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 35%] Built target mol2format /usr/bin/gmake -f src/formats/CMakeFiles/alchemyformat.dir/build.make src/formats/CMakeFiles/alchemyformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/alchemyformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/alchemyformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/alchemyformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/alchemyformat.dir/depend.internal". Scanning dependencies of target alchemyformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/alchemyformat.dir/build.make src/formats/CMakeFiles/alchemyformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 35%] Building CXX object src/formats/CMakeFiles/alchemyformat.dir/alchemyformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dalchemyformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/alchemyformat.dir/alchemyformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/alchemyformat.cpp [ 35%] Linking CXX shared module ../../lib64/gausszmatformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/gausszmatformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/gausszmatformat.so CMakeFiles/gausszmatformat.dir/gausszmatformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread [ 36%] Linking CXX shared module ../../lib64/alchemyformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/alchemyformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/alchemyformat.so CMakeFiles/alchemyformat.dir/alchemyformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 36%] Built target gausszmatformat /usr/bin/gmake -f src/formats/CMakeFiles/rxnformat.dir/build.make src/formats/CMakeFiles/rxnformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/rxnformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/rxnformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/rxnformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/rxnformat.dir/depend.internal". Scanning dependencies of target rxnformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/rxnformat.dir/build.make src/formats/CMakeFiles/rxnformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 36%] Building CXX object src/formats/CMakeFiles/rxnformat.dir/rxnformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Drxnformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/rxnformat.dir/rxnformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/rxnformat.cpp gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 36%] Built target alchemyformat /usr/bin/gmake -f src/formats/CMakeFiles/pwscfformat.dir/build.make src/formats/CMakeFiles/pwscfformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/pwscfformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/pwscfformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/pwscfformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/pwscfformat.dir/depend.internal". Scanning dependencies of target pwscfformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/pwscfformat.dir/build.make src/formats/CMakeFiles/pwscfformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 36%] Building CXX object src/formats/CMakeFiles/pwscfformat.dir/pwscfformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpwscfformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/pwscfformat.dir/pwscfformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/pwscfformat.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/rxnformat.cpp: In member function 'virtual bool OpenBabel::RXNFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/rxnformat.cpp:196:22: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 196 | for (int i=0; i >::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare] 133 | if(vs.size() < offset+9) | ~~~~~~~~~~^~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/cofformat.cpp:180:26: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 180 | for(int j=0 ; j< natoms ; j++) | ~^~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/cofformat.cpp: In member function 'virtual bool OpenBabel::COFFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/cofformat.cpp:368:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 368 | for( int j=0; j::size_type' {aka 'long unsigned int'} [-Wsign-compare] 129 | for (int i=1; i < binvals.size(); i++) | ~~^~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/confabreport.cpp:134:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 134 | for (int i=1; i < cumbins.size(); i++) | ~~^~~~~~~~~~~~~~~~ [ 38%] Linking CXX shared module ../../lib64/chem3dformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/chem3dformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/chem3dformat.so CMakeFiles/chem3dformat.dir/chem3dformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 38%] Built target chem3dformat /usr/bin/gmake -f src/formats/CMakeFiles/castepformat.dir/build.make src/formats/CMakeFiles/castepformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/castepformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/castepformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/castepformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/castepformat.dir/depend.internal". Scanning dependencies of target castepformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/castepformat.dir/build.make src/formats/CMakeFiles/castepformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 38%] Building CXX object src/formats/CMakeFiles/castepformat.dir/castepformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcastepformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/castepformat.dir/castepformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/castepformat.cpp [ 38%] Linking CXX shared module ../../lib64/confabreport.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/confabreport.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/confabreport.so CMakeFiles/confabreport.dir/confabreport.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 38%] Built target confabreport /usr/bin/gmake -f src/formats/CMakeFiles/adfformat.dir/build.make src/formats/CMakeFiles/adfformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/adfformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/adfformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/adfformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/adfformat.dir/depend.internal". Scanning dependencies of target adfformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/adfformat.dir/build.make src/formats/CMakeFiles/adfformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 38%] Building CXX object src/formats/CMakeFiles/adfformat.dir/adfformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dadfformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/adfformat.dir/adfformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/adfformat.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/castepformat.cpp: In member function 'OpenBabel::CASTEPFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/castepformat.cpp:195:21: warning: 'volume' may be used uninitialized in this function [-Wmaybe-uninitialized] 195 | pv = volume * pressure * GPA_A3_TO_KCAL_PER_MOL; | ~~~~~~~^~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/castepformat.cpp:195:21: warning: 'pressure' may be used uninitialized in this function [-Wmaybe-uninitialized] [ 39%] Linking CXX shared module ../../lib64/castepformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/castepformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/castepformat.so CMakeFiles/castepformat.dir/castepformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/adfformat.cpp: In member function 'bool OpenBabel::OBT41Format::ReadASCII(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/adfformat.cpp:871:7: warning: this 'while' clause does not guard... [-Wmisleading-indentation] 871 | while( buf != "Geometry" ) ifs >> buf; cout << buf << endl; | ^~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/adfformat.cpp:871:46: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'while' 871 | while( buf != "Geometry" ) ifs >> buf; cout << buf << endl; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/adfformat.cpp:884:7: warning: this 'while' clause does not guard... [-Wmisleading-indentation] 884 | while( buf != "Geometry" ) ifs >> buf; cout << buf << endl; | ^~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/adfformat.cpp:884:46: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'while' 884 | while( buf != "Geometry" ) ifs >> buf; cout << buf << endl; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/adfformat.cpp:906:7: warning: this 'while' clause does not guard... [-Wmisleading-indentation] 906 | while( buf != "Geometry" ) ifs >> buf; cout << buf << endl; | ^~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/adfformat.cpp:906:46: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'while' 906 | while( buf != "Geometry" ) ifs >> buf; cout << buf << endl; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/adfformat.cpp:921:7: warning: this 'while' clause does not guard... [-Wmisleading-indentation] 921 | while( buf != "Geometry" ) ifs >> buf; cout << buf << endl; | ^~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/adfformat.cpp:921:46: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'while' 921 | while( buf != "Geometry" ) ifs >> buf; cout << buf << endl; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/adfformat.cpp:936:7: warning: this 'while' clause does not guard... [-Wmisleading-indentation] 936 | while( buf != "Geometry" ) ifs >> buf; cout << buf << endl; | ^~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/adfformat.cpp:936:46: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'while' 936 | while( buf != "Geometry" ) ifs >> buf; cout << buf << endl; | ^~~~ gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 39%] Built target castepformat /usr/bin/gmake -f src/formats/CMakeFiles/outformat.dir/build.make src/formats/CMakeFiles/outformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/outformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/outformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/outformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/outformat.dir/depend.internal". Scanning dependencies of target outformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/outformat.dir/build.make src/formats/CMakeFiles/outformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 39%] Building CXX object src/formats/CMakeFiles/outformat.dir/outformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Doutformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/outformat.dir/outformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/outformat.cpp [ 39%] Linking CXX shared module ../../lib64/outformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/outformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/outformat.so CMakeFiles/outformat.dir/outformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 39%] Built target outformat /usr/bin/gmake -f src/formats/CMakeFiles/nulformat.dir/build.make src/formats/CMakeFiles/nulformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/nulformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/nulformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/nulformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/nulformat.dir/depend.internal". 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-I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/nulformat.dir/nulformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/nulformat.cpp [ 40%] Linking CXX shared module ../../lib64/adfformat.so cd 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-Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 40%] Built target nulformat /usr/bin/gmake -f src/formats/CMakeFiles/textformat.dir/build.make src/formats/CMakeFiles/textformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats 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Scanning dependencies of target textformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/textformat.dir/build.make src/formats/CMakeFiles/textformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 40%] Building CXX object src/formats/CMakeFiles/textformat.dir/textformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dtextformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/textformat.dir/textformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/textformat.cpp [ 41%] Linking CXX shared module ../../lib64/textformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/textformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/textformat.so CMakeFiles/textformat.dir/textformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 41%] Built target adfformat /usr/bin/gmake -f src/formats/CMakeFiles/pqrformat.dir/build.make src/formats/CMakeFiles/pqrformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/pqrformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/pqrformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/pqrformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/pqrformat.dir/depend.internal". Scanning dependencies of target pqrformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/pqrformat.dir/build.make src/formats/CMakeFiles/pqrformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 41%] Building CXX object src/formats/CMakeFiles/pqrformat.dir/pqrformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpqrformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/pqrformat.dir/pqrformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/pqrformat.cpp gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 41%] Built target textformat /usr/bin/gmake -f src/formats/CMakeFiles/stlformat.dir/build.make src/formats/CMakeFiles/stlformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/stlformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/stlformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/stlformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/stlformat.dir/depend.internal". Scanning dependencies of target stlformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/stlformat.dir/build.make src/formats/CMakeFiles/stlformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 41%] Building CXX object src/formats/CMakeFiles/stlformat.dir/stlformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dstlformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/stlformat.dir/stlformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/stlformat.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/stlformat.cpp: In function 'void OpenBabel::map_sphere(std::vector&, OpenBabel::vector3, double, uint16_t)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/stlformat.cpp:157:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 157 | for( int i=0 ; i < points.size()-2; i++ ) { | ~~^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/pqrformat.cpp: In function 'double OpenBabel::parseAtomCharge(char*, OpenBabel::OBMol&)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/pqrformat.cpp:207:13: warning: unused variable 'atom' [-Wunused-variable] 207 | OBAtom *atom = mol.GetAtom(mol.NumAtoms()); | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/pqrformat.cpp: In function 'double OpenBabel::parseAtomRadius(char*, OpenBabel::OBMol&)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/pqrformat.cpp:222:13: warning: unused variable 'atom' [-Wunused-variable] 222 | OBAtom *atom = mol.GetAtom(mol.NumAtoms()); | ^~~~ [ 41%] Linking CXX shared module ../../lib64/stlformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/stlformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/stlformat.so CMakeFiles/stlformat.dir/stlformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/pqrformat.cpp: In member function 'OpenBabel::PQRFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/pqrformat.cpp:511:58: warning: '__snprintf_chk' output may be truncated before the last format character [-Wformat-truncation=] 511 | snprintf(type_name, sizeof(type_name), " %-3s", tmp); | ^ In file included from /usr/include/stdio.h:866, from /usr/include/c++/10/cstdio:42, from /usr/include/c++/10/ext/string_conversions.h:43, from /usr/include/c++/10/bits/basic_string.h:6545, from /usr/include/c++/10/string:55, from /usr/include/c++/10/bits/locale_classes.h:40, from /usr/include/c++/10/bits/ios_base.h:41, from /usr/include/c++/10/ios:42, from /usr/include/c++/10/ostream:38, from /usr/include/c++/10/iostream:39, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/obconversion.h:24, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/obmolecformat.h:36, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/pqrformat.cpp:16: /usr/include/bits/stdio2.h:70:35: note: '__snprintf_chk' output between 5 and 11 bytes into a destination of size 10 70 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/pqrformat.cpp:528:66: warning: '%-3s' directive output may be truncated writing between 3 and 15 bytes into a region of size 9 [-Wformat-truncation=] 528 | snprintf(padded_name, sizeof(padded_name), " %-3s", tmp); | ^~~~ ~~~ In file included from /usr/include/stdio.h:866, from /usr/include/c++/10/cstdio:42, from /usr/include/c++/10/ext/string_conversions.h:43, from /usr/include/c++/10/bits/basic_string.h:6545, from /usr/include/c++/10/string:55, from /usr/include/c++/10/bits/locale_classes.h:40, from /usr/include/c++/10/bits/ios_base.h:41, from /usr/include/c++/10/ios:42, from /usr/include/c++/10/ostream:38, from /usr/include/c++/10/iostream:39, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/obconversion.h:24, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/obmolecformat.h:36, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/pqrformat.cpp:16: /usr/include/bits/stdio2.h:70:35: note: '__snprintf_chk' output between 5 and 17 bytes into a destination of size 10 70 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 41%] Built target stlformat /usr/bin/gmake -f src/formats/CMakeFiles/nwchemformat.dir/build.make src/formats/CMakeFiles/nwchemformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/nwchemformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/nwchemformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/nwchemformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/nwchemformat.dir/depend.internal". Scanning dependencies of target nwchemformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/nwchemformat.dir/build.make src/formats/CMakeFiles/nwchemformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 41%] Building CXX object src/formats/CMakeFiles/nwchemformat.dir/nwchemformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dnwchemformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/nwchemformat.dir/nwchemformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/nwchemformat.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/nwchemformat.cpp: In member function 'void OpenBabel::NWChemOutputFormat::ReadCoordinates(std::istream*, OpenBabel::OBMol*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/nwchemformat.cpp:228:72: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] 228 | if ((i>=natoms) || (molecule->GetAtom(i+1)->GetAtomicNum() != atoi(vs[2].c_str()))) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/nwchemformat.cpp: In member function 'void OpenBabel::NWChemOutputFormat::ReadMultipoleMoment(std::istream*, OpenBabel::OBMol*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/nwchemformat.cpp:306:17: warning: suggest explicit braces to avoid ambiguous 'else' [-Wdangling-else] 306 | else if (vs[0][0] == '1') | ^ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/nwchemformat.cpp: In member function 'void OpenBabel::NWChemOutputFormat::ReadPartialCharges(std::istream*, OpenBabel::OBMol*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/nwchemformat.cpp:423:56: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] 423 | if (molecule->GetAtom(i++)->GetAtomicNum() != charge) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/nwchemformat.cpp: In member function 'void OpenBabel::NWChemOutputFormat::ReadMEPCalculation(std::istream*, OpenBabel::OBMol*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/nwchemformat.cpp:571:25: warning: comparison of integer expressions of different signedness: 'std::vector::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare] 571 | if (energies.size() != molecule->NumConformers()) | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/nwchemformat.cpp: In member function 'void OpenBabel::NWChemOutputFormat::ReadZTSCalculation(std::istream*, OpenBabel::OBMol*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/nwchemformat.cpp:932:34: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 932 | if (atoi(buffer) != natoms) | ~~~~~~~~~~~~~^~~~~~~~~ [ 41%] Linking CXX shared module ../../lib64/pqrformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pqrformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/pqrformat.so CMakeFiles/pqrformat.dir/pqrformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/nwchemformat.cpp: At global scope: /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/nwchemformat.cpp:111:20: warning: 'OpenBabel::BETA_ORBITAL_PATTERN' defined but not used [-Wunused-variable] 111 | static const char* BETA_ORBITAL_PATTERN = "Beta"; | ^~~~~~~~~~~~~~~~~~~~ gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 41%] Built target pqrformat /usr/bin/gmake -f src/formats/CMakeFiles/povrayformat.dir/build.make src/formats/CMakeFiles/povrayformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/povrayformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/povrayformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/povrayformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/povrayformat.dir/depend.internal". Scanning dependencies of target povrayformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/povrayformat.dir/build.make src/formats/CMakeFiles/povrayformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 42%] Building CXX object src/formats/CMakeFiles/povrayformat.dir/povrayformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpovrayformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/povrayformat.dir/povrayformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/povrayformat.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/nwchemformat.cpp: In member function 'OpenBabel::NWChemOutputFormat::ReadZTSCalculation(std::basic_istream >*, OpenBabel::OBMol*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/nwchemformat.cpp:957:21: warning: 'nbeads' may be used uninitialized in this function [-Wmaybe-uninitialized] 957 | if (bead_number != nbeads) | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/povrayformat.cpp: In member function 'void OpenBabel::PovrayFormat::OutputHeader(std::ostream&, OpenBabel::OBMol&, std::string)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/povrayformat.cpp:173:12: warning: variable 'time_res' set but not used [-Wunused-but-set-variable] 173 | size_t time_res; /* Result of strftime */ | ^~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/povrayformat.cpp: In member function 'virtual bool OpenBabel::PovrayFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/povrayformat.cpp:807:17: warning: unused variable 'title' [-Wunused-variable] 807 | const char* title = pmol->GetTitle(); | ^~~~~ In file included from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/nwchemformat.cpp:18: /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/nwchemformat.cpp: In member function 'OpenBabel::NWChemOutputFormat::ReadSinglePointCalculation(std::basic_istream >*, OpenBabel::OBMol*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/mol.h:348:47: warning: 'energy' may be used uninitialized in this function [-Wmaybe-uninitialized] 348 | void SetEnergy(double energy) { _energy = energy; } | ~~~~~~~~^~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/nwchemformat.cpp:750:12: note: 'energy' was declared here 750 | double energy; | ^~~~~~ [ 42%] Linking CXX shared module ../../lib64/nwchemformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/nwchemformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/nwchemformat.so CMakeFiles/nwchemformat.dir/nwchemformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread [ 42%] Linking CXX shared module ../../lib64/povrayformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/povrayformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/povrayformat.so CMakeFiles/povrayformat.dir/povrayformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 42%] Built target povrayformat /usr/bin/gmake -f src/formats/CMakeFiles/inchiformat.dir/build.make src/formats/CMakeFiles/inchiformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/inchiformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/inchiformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/inchiformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/inchiformat.dir/depend.internal". Scanning dependencies of target inchiformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/inchiformat.dir/build.make src/formats/CMakeFiles/inchiformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 42%] Building CXX object src/formats/CMakeFiles/inchiformat.dir/inchiformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dinchiformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/inchiformat.dir/inchiformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/inchiformat.cpp gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 42%] Built target nwchemformat /usr/bin/gmake -f src/formats/CMakeFiles/aoforceformat.dir/build.make src/formats/CMakeFiles/aoforceformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/aoforceformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/aoforceformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/aoforceformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/aoforceformat.dir/depend.internal". Scanning dependencies of target aoforceformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/aoforceformat.dir/build.make src/formats/CMakeFiles/aoforceformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 42%] Building CXX object src/formats/CMakeFiles/aoforceformat.dir/aoforceformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Daoforceformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/aoforceformat.dir/aoforceformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/aoforceformat.cpp In file included from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/inchiformat.cpp:32: /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/inchiformat.h: In member function 'bool OpenBabel::InChIFormat::InchiLess::operator()(const string&, const string&) const': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/inchiformat.h:149:13: warning: this 'while' clause does not guard... [-Wmisleading-indentation] 149 | while(p1!=s1.end() && isdigit(*p1++)); --p1; | ^~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/inchiformat.h:149:52: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'while' 149 | while(p1!=s1.end() && isdigit(*p1++)); --p1; | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/inchiformat.h:154:13: warning: this 'while' clause does not guard... [-Wmisleading-indentation] 154 | while(p2!=s2.end() && isdigit(*p2++)); --p2; | ^~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/inchiformat.h:154:52: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'while' 154 | while(p2!=s2.end() && isdigit(*p2++)); --p2; | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/inchiformat.cpp: In member function 'virtual bool OpenBabel::InChIFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/inchiformat.cpp:193:52: warning: comparison of integer expressions of different signedness: 'long unsigned int' and 'AT_NUM' {aka 'short int'} [-Wsign-compare] 193 | if ( !(a->GetId() == ct->end || a->GetId() == stereo.neighbor[0] ) ) { | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/inchiformat.cpp:199:54: warning: comparison of integer expressions of different signedness: 'long unsigned int' and 'AT_NUM' {aka 'short int'} [-Wsign-compare] 199 | if ( !(b->GetId() == ct->begin || b->GetId() == stereo.neighbor[3] ) ) { | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ [ 42%] Linking CXX shared module ../../lib64/aoforceformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/aoforceformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/aoforceformat.so CMakeFiles/aoforceformat.dir/aoforceformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 42%] Built target aoforceformat /usr/bin/gmake -f src/formats/CMakeFiles/MNAformat.dir/build.make src/formats/CMakeFiles/MNAformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/MNAformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/MNAformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/MNAformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/MNAformat.dir/depend.internal". Scanning dependencies of target MNAformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/MNAformat.dir/build.make src/formats/CMakeFiles/MNAformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 42%] Building CXX object src/formats/CMakeFiles/MNAformat.dir/MNAformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMNAformat_EXPORTS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/MNAformat.dir/MNAformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/MNAformat.cpp [ 43%] Building CXX object src/formats/CMakeFiles/inchiformat.dir/getinchi.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dinchiformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/inchiformat.dir/getinchi.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/getinchi.cpp [ 43%] Building CXX object src/formats/CMakeFiles/inchiformat.dir/__/ops/unique.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dinchiformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/inchiformat.dir/__/ops/unique.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/ops/unique.cpp In file included from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/ops/unique.cpp:23: /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/inchiformat.h: In member function 'bool OpenBabel::InChIFormat::InchiLess::operator()(const string&, const string&) const': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/inchiformat.h:149:13: warning: this 'while' clause does not guard... [-Wmisleading-indentation] 149 | while(p1!=s1.end() && isdigit(*p1++)); --p1; | ^~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/inchiformat.h:149:52: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'while' 149 | while(p1!=s1.end() && isdigit(*p1++)); --p1; | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/inchiformat.h:154:13: warning: this 'while' clause does not guard... [-Wmisleading-indentation] 154 | while(p2!=s2.end() && isdigit(*p2++)); --p2; | ^~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/inchiformat.h:154:52: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'while' 154 | while(p2!=s2.end() && isdigit(*p2++)); --p2; | ^~ [ 43%] Linking CXX shared module ../../lib64/MNAformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/MNAformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/MNAformat.so CMakeFiles/MNAformat.dir/MNAformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread [ 43%] Linking CXX shared module ../../lib64/inchiformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/inchiformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/inchiformat.so CMakeFiles/inchiformat.dir/inchiformat.cpp.o CMakeFiles/inchiformat.dir/getinchi.cpp.o CMakeFiles/inchiformat.dir/__/ops/unique.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 43%] Built target MNAformat /usr/bin/gmake -f src/formats/CMakeFiles/boxformat.dir/build.make src/formats/CMakeFiles/boxformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/boxformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/boxformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/boxformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/boxformat.dir/depend.internal". Scanning dependencies of target boxformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/boxformat.dir/build.make src/formats/CMakeFiles/boxformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 43%] Building CXX object src/formats/CMakeFiles/boxformat.dir/boxformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dboxformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/boxformat.dir/boxformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/boxformat.cpp [ 43%] Linking CXX shared module ../../lib64/boxformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/boxformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/boxformat.so CMakeFiles/boxformat.dir/boxformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 43%] Built target boxformat /usr/bin/gmake -f src/formats/CMakeFiles/asciiformat.dir/build.make src/formats/CMakeFiles/asciiformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/asciiformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/asciiformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/asciiformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/asciiformat.dir/depend.internal". Scanning dependencies of target asciiformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/asciiformat.dir/build.make src/formats/CMakeFiles/asciiformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 44%] Building CXX object src/formats/CMakeFiles/asciiformat.dir/asciiformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dasciiformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/asciiformat.dir/asciiformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/asciiformat.cpp gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 44%] Built target inchiformat /usr/bin/gmake -f src/formats/CMakeFiles/pngformat.dir/build.make src/formats/CMakeFiles/pngformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/pngformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/pngformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/pngformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/pngformat.dir/depend.internal". Scanning dependencies of target pngformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/pngformat.dir/build.make src/formats/CMakeFiles/pngformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 44%] Building CXX object src/formats/CMakeFiles/pngformat.dir/pngformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpngformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/pngformat.dir/pngformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/pngformat.cpp [ 44%] Building CXX object src/formats/CMakeFiles/asciiformat.dir/__/depict/asciipainter.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dasciiformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/asciiformat.dir/__/depict/asciipainter.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/depict/asciipainter.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/depict/asciipainter.cpp: In member function 'virtual void OpenBabel::ASCIIPainter::DrawText(double, double, const string&)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/depict/asciipainter.cpp:118:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string::size_type' {aka 'long unsigned int'} [-Wsign-compare] 118 | for (int i=0; i impval) { | ~~~~^~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/mdlformat.cpp: In member function 'bool OpenBabel::MDLFormat::ReadAtomBlock(std::istream&, OpenBabel::OBMol&, OpenBabel::OBConversion*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/mdlformat.cpp:1488:10: warning: unused variable 'chiralWatch' [-Wunused-variable] 1488 | bool chiralWatch=false; | ^~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/PQSformat.cpp: In member function 'OpenBabel::PQSFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/PQSformat.cpp:263:49: warning: 'pFormat' may be used uninitialized in this function [-Wmaybe-uninitialized] 263 | return pFormat->ReadMolecule(&mol,&coordconv); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ [ 46%] Linking CXX shared module ../../lib64/PQSformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/PQSformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/PQSformat.so CMakeFiles/PQSformat.dir/PQSformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 46%] Built target PQSformat /usr/bin/gmake -f src/formats/CMakeFiles/gamessformat.dir/build.make src/formats/CMakeFiles/gamessformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/gamessformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/gamessformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/gamessformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/gamessformat.dir/depend.internal". Scanning dependencies of target gamessformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/gamessformat.dir/build.make src/formats/CMakeFiles/gamessformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 46%] Building CXX object src/formats/CMakeFiles/gamessformat.dir/gamessformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dgamessformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/gamessformat.dir/gamessformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/gamessformat.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/mdlformat.cpp: In member function 'OpenBabel::MDLFormat::GetTimeDate[abi:cxx11]()': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/mdlformat.cpp:1709:27: warning: '%02d' directive output may be truncated writing between 2 and 11 bytes into a region of size between 0 and 9 [-Wformat-truncation=] 1709 | snprintf(td, 11, "%02d%02d%02d%02d%02d", ts->tm_mon+1, ts->tm_mday, | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/mdlformat.cpp:1709:22: note: directive argument in the range [-2147483648, 2147483547] 1709 | snprintf(td, 11, "%02d%02d%02d%02d%02d", ts->tm_mon+1, ts->tm_mday, | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:866, from /usr/include/c++/10/cstdio:42, from /usr/include/c++/10/ext/string_conversions.h:43, from /usr/include/c++/10/bits/basic_string.h:6545, from /usr/include/c++/10/string:55, from /usr/include/c++/10/bits/locale_classes.h:40, from /usr/include/c++/10/bits/ios_base.h:41, from /usr/include/c++/10/iomanip:40, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/mdlformat.cpp:27: /usr/include/bits/stdio2.h:70:35: note: '__snprintf_chk' output between 11 and 56 bytes into a destination of size 11 70 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/gamessformat.cpp: In member function 'virtual bool OpenBabel::GAMESSOutputFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/gamessformat.cpp:587:38: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] 587 | for (unsigned int i=0; i < modeCount; ++i) { | ~~^~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/gamessformat.cpp:233:9: warning: variable 'ndummyatoms' set but not used [-Wunused-but-set-variable] 233 | int ndummyatoms = 0; | ^~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/mdlformat.cpp: In member function 'OpenBabel::MDLFormat::CisTransFromUpDown(OpenBabel::OBMol*, std::map, std::allocator > >*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/mdlformat.cpp:2028:58: warning: 'a2_stereo' may be used uninitialized in this function [-Wmaybe-uninitialized] 2028 | if (a1_stereo == OBStereo::UnknownDir || a2_stereo == OBStereo::UnknownDir) | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/mdlformat.cpp:2028:21: warning: 'a1_stereo' may be used uninitialized in this function [-Wmaybe-uninitialized] 2028 | if (a1_stereo == OBStereo::UnknownDir || a2_stereo == OBStereo::UnknownDir) | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/gamessformat.cpp:533:58: warning: 'lowFreqModesEnd' may be used uninitialized in this function [-Wmaybe-uninitialized] 533 | if (numIntens < lowFreqModesBegin || numIntens > lowFreqModesEnd) | ~~~~~~~~~~^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/gamessformat.cpp:533:25: warning: 'lowFreqModesBegin' may be used uninitialized in this function [-Wmaybe-uninitialized] 533 | if (numIntens < lowFreqModesBegin || numIntens > lowFreqModesEnd) | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ [ 46%] Linking CXX shared module ../../lib64/mdlformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdlformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/mdlformat.so CMakeFiles/mdlformat.dir/mdlformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread [ 47%] Linking CXX shared module ../../lib64/gamessformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/gamessformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/gamessformat.so CMakeFiles/gamessformat.dir/gamessformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 47%] Built target gamessformat /usr/bin/gmake -f src/formats/CMakeFiles/turbomoleformat.dir/build.make src/formats/CMakeFiles/turbomoleformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu 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Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/turbomoleformat.dir/depend.internal". Scanning dependencies of target turbomoleformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/turbomoleformat.dir/build.make src/formats/CMakeFiles/turbomoleformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 47%] Building CXX object src/formats/CMakeFiles/turbomoleformat.dir/turbomoleformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dturbomoleformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/turbomoleformat.dir/turbomoleformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/turbomoleformat.cpp gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 47%] Built target mdlformat /usr/bin/gmake -f src/formats/CMakeFiles/thermoformat.dir/build.make src/formats/CMakeFiles/thermoformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/thermoformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/thermoformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/thermoformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/thermoformat.dir/depend.internal". Scanning dependencies of target thermoformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/thermoformat.dir/build.make src/formats/CMakeFiles/thermoformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 47%] Building CXX object src/formats/CMakeFiles/thermoformat.dir/thermoformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dthermoformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/thermoformat.dir/thermoformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/thermoformat.cpp [ 47%] Linking CXX shared module ../../lib64/turbomoleformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/turbomoleformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/turbomoleformat.so CMakeFiles/turbomoleformat.dir/turbomoleformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 47%] Built target turbomoleformat /usr/bin/gmake -f src/formats/CMakeFiles/svgformat.dir/build.make src/formats/CMakeFiles/svgformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/svgformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/svgformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/svgformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/svgformat.dir/depend.internal". Scanning dependencies of target svgformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/svgformat.dir/build.make src/formats/CMakeFiles/svgformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 47%] Building CXX object src/formats/CMakeFiles/svgformat.dir/svgformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dsvgformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/svgformat.dir/svgformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/svgformat.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/svgformat.cpp: In member function 'virtual bool OpenBabel::SVGFormat::WriteChemObject(OpenBabel::OBConversion*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/svgformat.cpp:226:42: warning: comparison of integer expressions of different signedness: 'std::vector::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare] 226 | bool nomore = _nmax && (_objects.size()==_nmax); | ~~~~~~~~~~~~~~~^~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/svgformat.cpp:248:18: warning: unused variable 'n' [-Wunused-variable] 248 | unsigned int n=0; | ^ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/svgformat.cpp: In member function 'virtual bool OpenBabel::SVGFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/svgformat.cpp:273:8: warning: unused variable 'ret' [-Wunused-variable] 273 | bool ret = WriteSVG(pConv,_objects); | ^~~ [ 47%] Linking CXX shared module ../../lib64/thermoformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/thermoformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/thermoformat.so CMakeFiles/thermoformat.dir/thermoformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 47%] Built target thermoformat /usr/bin/gmake -f src/formats/CMakeFiles/painterformat.dir/build.make src/formats/CMakeFiles/painterformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/painterformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/painterformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/painterformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/painterformat.dir/depend.internal". Scanning dependencies of target painterformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/painterformat.dir/build.make src/formats/CMakeFiles/painterformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 48%] Building CXX object src/formats/CMakeFiles/painterformat.dir/painterformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpainterformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/painterformat.dir/painterformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/painterformat.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/painterformat.cpp: In member function 'virtual bool OpenBabel::PainterFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/painterformat.cpp:114:12: warning: unused variable 'ofs' [-Wunused-variable] 114 | ostream& ofs = *pConv->GetOutStream(); | ^~~ [ 48%] Linking CXX shared module ../../lib64/svgformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/svgformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/svgformat.so CMakeFiles/svgformat.dir/svgformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread [ 48%] Building CXX object src/formats/CMakeFiles/painterformat.dir/__/depict/commandpainter.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpainterformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/painterformat.dir/__/depict/commandpainter.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/depict/commandpainter.cpp [ 48%] Linking CXX shared module ../../lib64/painterformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/painterformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/painterformat.so CMakeFiles/painterformat.dir/painterformat.cpp.o CMakeFiles/painterformat.dir/__/depict/commandpainter.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 48%] Built target svgformat /usr/bin/gmake -f src/formats/CMakeFiles/daltonformat.dir/build.make src/formats/CMakeFiles/daltonformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/daltonformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/daltonformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/daltonformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/daltonformat.dir/depend.internal". Scanning dependencies of target daltonformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/daltonformat.dir/build.make src/formats/CMakeFiles/daltonformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 48%] Building CXX object src/formats/CMakeFiles/daltonformat.dir/daltonformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Ddaltonformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/daltonformat.dir/daltonformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/daltonformat.cpp gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 48%] Built target painterformat /usr/bin/gmake -f src/formats/CMakeFiles/chemkinformat.dir/build.make src/formats/CMakeFiles/chemkinformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/chemkinformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/chemkinformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/chemkinformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/chemkinformat.dir/depend.internal". Scanning dependencies of target chemkinformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/chemkinformat.dir/build.make src/formats/CMakeFiles/chemkinformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 48%] Building CXX object src/formats/CMakeFiles/chemkinformat.dir/chemkinformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dchemkinformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/chemkinformat.dir/chemkinformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/chemkinformat.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/daltonformat.cpp: In member function 'virtual bool OpenBabel::DALTONInputFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/daltonformat.cpp:148:9: warning: variable 'atomcount' set but not used [-Wunused-but-set-variable] 148 | int atomcount = 0; // for each atom type | ^~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/daltonformat.cpp: In member function 'virtual bool OpenBabel::DALTONInputFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/daltonformat.cpp:312:31: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] 312 | if(atom->GetAtomicNum() != atomtype) | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/daltonformat.cpp:332:31: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] 332 | if(atom->GetAtomicNum() != atomtype) | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/chemkinformat.cpp: In member function 'bool OpenBabel::ChemKinFormat::ReadReactionQualifierLines(std::istream&, OpenBabel::OBReaction*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/chemkinformat.cpp:640:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 640 | for(int i=0;iReactionType) | ^ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/chemkinformat.cpp:911:11: warning: enumeration value 'THREEBODY' not handled in switch [-Wswitch] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/chemkinformat.cpp:990:11: warning: enumeration value 'ARRHENIUS' not handled in switch [-Wswitch] 990 | switch(pRD->ReactionType) | ^ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/chemkinformat.cpp:990:11: warning: enumeration value 'SRI' not handled in switch [-Wswitch] [ 48%] Linking CXX shared module ../../lib64/daltonformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/daltonformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/daltonformat.so CMakeFiles/daltonformat.dir/daltonformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 48%] Built target daltonformat /usr/bin/gmake -f src/formats/CMakeFiles/xmlformat.dir/build.make src/formats/CMakeFiles/xmlformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/xmlformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/xmlformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/xmlformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/xmlformat.dir/depend.internal". Scanning dependencies of target xmlformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/xmlformat.dir/build.make src/formats/CMakeFiles/xmlformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 49%] Building CXX object src/formats/CMakeFiles/xmlformat.dir/xml/xmlformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dxmlformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/xmlformat.dir/xml/xmlformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/xml/xmlformat.cpp [ 49%] Building CXX object src/formats/CMakeFiles/xmlformat.dir/xml/xml.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dxmlformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/xmlformat.dir/xml/xml.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/xml/xml.cpp [ 49%] Linking CXX shared module ../../lib64/xmlformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/xmlformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/xmlformat.so CMakeFiles/xmlformat.dir/xml/xmlformat.cpp.o CMakeFiles/xmlformat.dir/xml/xml.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm -lxml2 ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 49%] Built target xmlformat /usr/bin/gmake -f src/formats/CMakeFiles/abinitformat.dir/build.make src/formats/CMakeFiles/abinitformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/abinitformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/abinitformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/abinitformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/abinitformat.dir/depend.internal". Scanning dependencies of target abinitformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/abinitformat.dir/build.make src/formats/CMakeFiles/abinitformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 49%] Building CXX object src/formats/CMakeFiles/abinitformat.dir/abinitformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dabinitformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/abinitformat.dir/abinitformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/abinitformat.cpp [ 50%] Linking CXX shared module ../../lib64/chemkinformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/chemkinformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/chemkinformat.so CMakeFiles/chemkinformat.dir/chemkinformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/abinitformat.cpp: In member function 'virtual bool OpenBabel::ABINITFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/abinitformat.cpp:99:12: warning: variable 'acell' set but not used [-Wunused-but-set-variable] 99 | double acell[3]; // scale of lattice vectors | ^~~~~ [ 50%] Linking CXX shared module ../../lib64/abinitformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/abinitformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/abinitformat.so CMakeFiles/abinitformat.dir/abinitformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 50%] Built target abinitformat /usr/bin/gmake -f src/formats/CMakeFiles/tinkerformat.dir/build.make src/formats/CMakeFiles/tinkerformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/tinkerformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/tinkerformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/tinkerformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/tinkerformat.dir/depend.internal". Scanning dependencies of target tinkerformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/tinkerformat.dir/build.make src/formats/CMakeFiles/tinkerformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 50%] Building CXX object src/formats/CMakeFiles/tinkerformat.dir/tinkerformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dtinkerformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/tinkerformat.dir/tinkerformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/tinkerformat.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/tinkerformat.cpp: In function 'int OpenBabel::SetMM3Type(OpenBabel::OBAtom*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/tinkerformat.cpp:415:11: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 415 | if (b->GetHyb() == 2) // S=C | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/tinkerformat.cpp:416:31: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 416 | countNeighborC++; break; | ^~~~~ gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 50%] Built target chemkinformat /usr/bin/gmake -f src/formats/CMakeFiles/APIInterface.dir/build.make src/formats/CMakeFiles/APIInterface.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/APIInterface.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/APIInterface.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/APIInterface.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/APIInterface.dir/depend.internal". Scanning dependencies of target APIInterface gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/APIInterface.dir/build.make src/formats/CMakeFiles/APIInterface.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 50%] Building CXX object src/formats/CMakeFiles/APIInterface.dir/APIInterface.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DAPIInterface_EXPORTS -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/APIInterface.dir/APIInterface.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/APIInterface.cpp [ 50%] Linking CXX shared module ../../lib64/tinkerformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/tinkerformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/tinkerformat.so CMakeFiles/tinkerformat.dir/tinkerformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread [ 50%] Linking CXX shared module ../../lib64/APIInterface.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/APIInterface.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/APIInterface.so CMakeFiles/APIInterface.dir/APIInterface.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 50%] Built target tinkerformat /usr/bin/gmake -f src/formats/CMakeFiles/fchkformat.dir/build.make src/formats/CMakeFiles/fchkformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/fchkformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/fchkformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/fchkformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/fchkformat.dir/depend.internal". Scanning dependencies of target fchkformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/fchkformat.dir/build.make src/formats/CMakeFiles/fchkformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 51%] Building CXX object src/formats/CMakeFiles/fchkformat.dir/fchkformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dfchkformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/fchkformat.dir/fchkformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/fchkformat.cpp gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 51%] Built target APIInterface /usr/bin/gmake -f src/formats/CMakeFiles/pubchem.dir/build.make src/formats/CMakeFiles/pubchem.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/pubchem.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/pubchem.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/pubchem.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/pubchem.dir/depend.internal". Scanning dependencies of target pubchem gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/pubchem.dir/build.make src/formats/CMakeFiles/pubchem.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 51%] Building CXX object src/formats/CMakeFiles/pubchem.dir/xml/pubchem.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpubchem_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/pubchem.dir/xml/pubchem.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/xml/pubchem.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/fchkformat.cpp: In member function 'virtual bool OpenBabel::FCHKFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/fchkformat.cpp:596:40: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 596 | if (alphaorb_found && (numAOrb > alphaorb.size())) | ~~~~~~~~^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/fchkformat.cpp:609:40: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 609 | if (betaorb_found && (numBOrb > betaorb.size())) | ~~~~~~~~^~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/fchkformat.cpp:700:40: warning: comparison of integer expressions of different signedness: 'std::vector::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare] 700 | if (numAOrb > 0 && alphaorb.size() == numAOrb) { | ~~~~~~~~~~~~~~~~^~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/fchkformat.cpp:704:41: warning: comparison of integer expressions of different signedness: 'std::vector::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare] 704 | if (numBOrb > 0 && betaorb.size() == numBOrb) { // open shell calculation | ~~~~~~~~~~~~~~~^~~~~~~~~~ [ 52%] Building CXX object src/formats/CMakeFiles/pubchem.dir/xml/xml.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpubchem_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/pubchem.dir/xml/xml.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/xml/xml.cpp [ 52%] Linking CXX shared module ../../lib64/pubchem.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pubchem.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/pubchem.so CMakeFiles/pubchem.dir/xml/pubchem.cpp.o CMakeFiles/pubchem.dir/xml/xml.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm -lxml2 ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread [ 52%] Linking CXX shared module ../../lib64/fchkformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/fchkformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/fchkformat.so CMakeFiles/fchkformat.dir/fchkformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 52%] Built target pubchem /usr/bin/gmake -f src/formats/CMakeFiles/carformat.dir/build.make src/formats/CMakeFiles/carformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa 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Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/carformat.dir/depend.internal". Scanning dependencies of target carformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/carformat.dir/build.make src/formats/CMakeFiles/carformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 52%] Building CXX object src/formats/CMakeFiles/carformat.dir/carformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcarformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/carformat.dir/carformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/carformat.cpp [ 52%] Linking CXX shared module ../../lib64/carformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/carformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/carformat.so CMakeFiles/carformat.dir/carformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 52%] Built target carformat /usr/bin/gmake -f src/formats/CMakeFiles/pdbformat.dir/build.make src/formats/CMakeFiles/pdbformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/pdbformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/pdbformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/pdbformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/pdbformat.dir/depend.internal". Scanning dependencies of target pdbformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/pdbformat.dir/build.make src/formats/CMakeFiles/pdbformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 53%] Building CXX object src/formats/CMakeFiles/pdbformat.dir/pdbformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpdbformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/pdbformat.dir/pdbformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/pdbformat.cpp gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 53%] Built target fchkformat /usr/bin/gmake -f src/formats/CMakeFiles/cccformat.dir/build.make src/formats/CMakeFiles/cccformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/cccformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/cccformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/cccformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/cccformat.dir/depend.internal". Scanning dependencies of target cccformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/cccformat.dir/build.make src/formats/CMakeFiles/cccformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 53%] Building CXX object src/formats/CMakeFiles/cccformat.dir/cccformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcccformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/cccformat.dir/cccformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/cccformat.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/pdbformat.cpp: In member function 'virtual bool OpenBabel::PDBFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/pdbformat.cpp:615:26: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'const int' [-Wsign-compare] 615 | if (origin == pUC->GetSpaceGroup()->HEXAGONAL_ORIGIN) | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 53%] Linking CXX shared module ../../lib64/cccformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cccformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/cccformat.so CMakeFiles/cccformat.dir/cccformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 53%] Built target cccformat /usr/bin/gmake -f src/formats/CMakeFiles/gamessukformat.dir/build.make src/formats/CMakeFiles/gamessukformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/gamessukformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/gamessukformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/gamessukformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/gamessukformat.dir/depend.internal". Scanning dependencies of target gamessukformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/gamessukformat.dir/build.make src/formats/CMakeFiles/gamessukformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 53%] Building CXX object src/formats/CMakeFiles/gamessukformat.dir/gamessukformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dgamessukformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/gamessukformat.dir/gamessukformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/gamessukformat.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/gamessukformat.cpp: In member function 'bool OpenBabel::GAMESSUKOutputFormat::ReadInitialCartesian(OpenBabel::OBMol&, std::istream&)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/gamessukformat.cpp:787:10: warning: variable 'ok' set but not used [-Wunused-but-set-variable] 787 | bool ok=false; | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/gamessukformat.cpp: In member function 'bool OpenBabel::GAMESSUKOutputFormat::ReadOptGeomXyz1(OpenBabel::OBMol&, std::istream&)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/gamessukformat.cpp:853:12: warning: variable 'ok' set but not used [-Wunused-but-set-variable] 853 | bool ok=false; | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/gamessukformat.cpp: In member function 'bool OpenBabel::GAMESSUKOutputFormat::ReadOptGeomXyz2(OpenBabel::OBMol&, std::istream&)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/gamessukformat.cpp:900:12: warning: variable 'ok' set but not used [-Wunused-but-set-variable] 900 | bool ok=false; | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/gamessukformat.cpp: In member function 'virtual bool OpenBabel::GAMESSUKOutputFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/gamessukformat.cpp:1215:12: warning: variable 'ok' set but not used [-Wunused-but-set-variable] 1215 | bool ok; | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/pdbformat.cpp:684:58: warning: '__snprintf_chk' output may be truncated before the last format character [-Wformat-truncation=] 684 | snprintf(type_name, sizeof(type_name), " %-3s", tmp); | ^ In file included from /usr/include/stdio.h:866, from /usr/include/c++/10/cstdio:42, from /usr/include/c++/10/ext/string_conversions.h:43, from /usr/include/c++/10/bits/basic_string.h:6545, from /usr/include/c++/10/string:55, from /usr/include/c++/10/bits/locale_classes.h:40, from /usr/include/c++/10/bits/ios_base.h:41, from /usr/include/c++/10/ios:42, from /usr/include/c++/10/ostream:38, from /usr/include/c++/10/iostream:39, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/obconversion.h:24, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/obmolecformat.h:36, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/pdbformat.cpp:17: /usr/include/bits/stdio2.h:70:35: note: '__snprintf_chk' output between 5 and 11 bytes into a destination of size 10 70 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/pdbformat.cpp:702:70: warning: '__snprintf_chk' output may be truncated before the last format character [-Wformat-truncation=] 702 | snprintf(padded_name, sizeof(padded_name), " %-3s", tmp); | ^ In file included from /usr/include/stdio.h:866, from /usr/include/c++/10/cstdio:42, from /usr/include/c++/10/ext/string_conversions.h:43, from /usr/include/c++/10/bits/basic_string.h:6545, from /usr/include/c++/10/string:55, from /usr/include/c++/10/bits/locale_classes.h:40, from /usr/include/c++/10/bits/ios_base.h:41, from /usr/include/c++/10/ios:42, from /usr/include/c++/10/ostream:38, from /usr/include/c++/10/iostream:39, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/obconversion.h:24, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/obmolecformat.h:36, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/pdbformat.cpp:17: /usr/include/bits/stdio2.h:70:35: note: '__snprintf_chk' output between 5 and 11 bytes into a destination of size 10 70 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/pdbformat.cpp:739:35: warning: '%+d' directive output may be truncated writing between 2 and 6 bytes into a region of size 3 [-Wformat-truncation=] 739 | snprintf(scharge, 3, "%+d", charge); | ^~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/pdbformat.cpp:739:34: note: directive argument in the range [-32768, 32767] 739 | snprintf(scharge, 3, "%+d", charge); | ^~~~~ In file included from /usr/include/stdio.h:866, from /usr/include/c++/10/cstdio:42, from /usr/include/c++/10/ext/string_conversions.h:43, from /usr/include/c++/10/bits/basic_string.h:6545, from /usr/include/c++/10/string:55, from /usr/include/c++/10/bits/locale_classes.h:40, from /usr/include/c++/10/bits/ios_base.h:41, from /usr/include/c++/10/ios:42, from /usr/include/c++/10/ostream:38, from /usr/include/c++/10/iostream:39, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/obconversion.h:24, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/obmolecformat.h:36, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/pdbformat.cpp:17: /usr/include/bits/stdio2.h:70:35: note: '__snprintf_chk' output between 3 and 7 bytes into a destination of size 3 70 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 53%] Linking CXX shared module ../../lib64/pdbformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pdbformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/pdbformat.so CMakeFiles/pdbformat.dir/pdbformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread [ 53%] Linking CXX shared module ../../lib64/gamessukformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/gamessukformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/gamessukformat.so CMakeFiles/gamessukformat.dir/gamessukformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 53%] Built target pdbformat /usr/bin/gmake -f src/formats/CMakeFiles/pcmodelformat.dir/build.make src/formats/CMakeFiles/pcmodelformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/pcmodelformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/pcmodelformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/pcmodelformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/pcmodelformat.dir/depend.internal". Scanning dependencies of target pcmodelformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/pcmodelformat.dir/build.make src/formats/CMakeFiles/pcmodelformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 53%] Building CXX object src/formats/CMakeFiles/pcmodelformat.dir/pcmodelformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpcmodelformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/pcmodelformat.dir/pcmodelformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/pcmodelformat.cpp [ 53%] Linking CXX shared module ../../lib64/pcmodelformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pcmodelformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/pcmodelformat.so CMakeFiles/pcmodelformat.dir/pcmodelformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 53%] Built target pcmodelformat /usr/bin/gmake -f src/formats/CMakeFiles/copyformat.dir/build.make src/formats/CMakeFiles/copyformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/copyformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/copyformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/copyformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/copyformat.dir/depend.internal". Scanning dependencies of target copyformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/copyformat.dir/build.make src/formats/CMakeFiles/copyformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 54%] Building CXX object src/formats/CMakeFiles/copyformat.dir/copyformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcopyformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/copyformat.dir/copyformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/copyformat.cpp gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 54%] Built target gamessukformat /usr/bin/gmake -f src/formats/CMakeFiles/chemdrawct.dir/build.make src/formats/CMakeFiles/chemdrawct.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/chemdrawct.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/chemdrawct.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/chemdrawct.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/chemdrawct.dir/depend.internal". Scanning dependencies of target chemdrawct gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/chemdrawct.dir/build.make src/formats/CMakeFiles/chemdrawct.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 54%] Building CXX object src/formats/CMakeFiles/chemdrawct.dir/chemdrawct.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dchemdrawct_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/chemdrawct.dir/chemdrawct.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/chemdrawct.cpp [ 54%] Linking CXX shared module ../../lib64/copyformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/copyformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/copyformat.so CMakeFiles/copyformat.dir/copyformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 54%] Built target copyformat /usr/bin/gmake -f src/formats/CMakeFiles/chemtoolformat.dir/build.make src/formats/CMakeFiles/chemtoolformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/chemtoolformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/chemtoolformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/chemtoolformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/chemtoolformat.dir/depend.internal". Scanning dependencies of target chemtoolformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/chemtoolformat.dir/build.make src/formats/CMakeFiles/chemtoolformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 54%] Building CXX object src/formats/CMakeFiles/chemtoolformat.dir/chemtoolformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dchemtoolformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/chemtoolformat.dir/chemtoolformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/chemtoolformat.cpp [ 54%] Linking CXX shared module ../../lib64/chemdrawct.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/chemdrawct.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/chemdrawct.so CMakeFiles/chemdrawct.dir/chemdrawct.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz 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CMakeFiles/chemtoolformat.dir/chemtoolformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 54%] Built target chemdrawct /usr/bin/gmake -f src/formats/CMakeFiles/fhiaimsformat.dir/build.make src/formats/CMakeFiles/fhiaimsformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats 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Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/fhiaimsformat.dir/depend.internal". Scanning dependencies of target fhiaimsformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/fhiaimsformat.dir/build.make src/formats/CMakeFiles/fhiaimsformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 54%] Building CXX object src/formats/CMakeFiles/fhiaimsformat.dir/fhiaimsformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dfhiaimsformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/fhiaimsformat.dir/fhiaimsformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/fhiaimsformat.cpp gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 54%] Built target chemtoolformat /usr/bin/gmake -f src/formats/CMakeFiles/cifformat.dir/build.make src/formats/CMakeFiles/cifformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/cifformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/cifformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/cifformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/cifformat.dir/depend.internal". Scanning dependencies of target cifformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/cifformat.dir/build.make src/formats/CMakeFiles/cifformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 54%] Building CXX object src/formats/CMakeFiles/cifformat.dir/cifformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcifformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/cifformat.dir/cifformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/cifformat.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/cifformat.cpp: In member function 'void OpenBabel::CIFData::CalcMatrices()': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/cifformat.cpp:915:11: warning: variable 'aa' set but not used [-Wunused-but-set-variable] 915 | float aa,bb,cc,alphaa,betaa,gammaa;//reciprocal space parameters | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/cifformat.cpp:915:14: warning: variable 'bb' set but not used [-Wunused-but-set-variable] 915 | float aa,bb,cc,alphaa,betaa,gammaa;//reciprocal space parameters | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/cifformat.cpp:915:27: warning: variable 'betaa' set but not used [-Wunused-but-set-variable] 915 | float aa,bb,cc,alphaa,betaa,gammaa;//reciprocal space parameters | ^~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/cifformat.cpp:915:33: warning: variable 'gammaa' set but not used [-Wunused-but-set-variable] 915 | float aa,bb,cc,alphaa,betaa,gammaa;//reciprocal space parameters | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/cifformat.cpp: In member function 'virtual bool OpenBabel::CIFFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/cifformat.cpp:1693:15: warning: label 'std' defined but not used [-Wunused-label] 1693 | std:vector uc; | ^~~ [ 54%] Linking CXX shared module ../../lib64/fhiaimsformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/fhiaimsformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/fhiaimsformat.so CMakeFiles/fhiaimsformat.dir/fhiaimsformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 54%] Built target fhiaimsformat /usr/bin/gmake -f src/formats/CMakeFiles/gaussformat.dir/build.make src/formats/CMakeFiles/gaussformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/gaussformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/gaussformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/gaussformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/gaussformat.dir/depend.internal". Scanning dependencies of target gaussformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/gaussformat.dir/build.make src/formats/CMakeFiles/gaussformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 55%] Building CXX object src/formats/CMakeFiles/gaussformat.dir/gaussformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dgaussformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/gaussformat.dir/gaussformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/gaussformat.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/gaussformat.cpp: In function 'void OpenBabel::add_unique_pairdata_to_mol(OpenBabel::OBMol*, std::string, std::string, int)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/gaussformat.cpp:284:19: warning: comparison of integer expressions of different signedness: 'std::vector >::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare] 284 | if (vs.size() >= start) | ~~~~~~~~~~^~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/gaussformat.cpp:287:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 287 | for(i=start+1; (i::size_type' {aka 'long unsigned int'} [-Wsign-compare] 2200 | if (idx-1 < _hcount.size() && _hcount[idx-1] > 0) | ~~~~~~^~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smilesformat.cpp: In member function 'bool OpenBabel::OBMol2Cansmi::GetSmilesElement(OpenBabel::OBCanSmiNode*, std::vector&, std::vector&, std::string&)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smilesformat.cpp:2685:10: warning: variable 'symbol' set but not used [-Wunused-but-set-variable] 2685 | char symbol[10]; | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smilesformat.cpp:2689:10: warning: unused variable 'normalValence' [-Wunused-variable] 2689 | bool normalValence = true; | ^~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smilesformat.cpp:2690:10: warning: unused variable 'writeExplicitHydrogen' [-Wunused-variable] 2690 | bool writeExplicitHydrogen = false; | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smilesformat.cpp: In member function 'bool OpenBabel::OBMol2Cansmi::BuildCanonTree(OpenBabel::OBMol&, OpenBabel::OBBitVec&, std::vector&, OpenBabel::OBCanSmiNode*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smilesformat.cpp:3139:22: warning: unused variable 'bond_order' [-Wunused-variable] 3139 | unsigned int bond_order = bond->GetBondOrder(); | ^~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smilesformat.cpp:3134:20: warning: unused variable 'nbr_bond_order' [-Wunused-variable] 3134 | unsigned int nbr_bond_order = nbr_bond->GetBondOrder(); | ^~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smilesformat.cpp: In member function 'std::vector OpenBabel::OBMol2Cansmi::GetCanonClosureDigits(OpenBabel::OBAtom*, OpenBabel::OBBitVec&, std::vector&)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smilesformat.cpp:3286:11: warning: unused variable 'bo' [-Wunused-variable] 3286 | int bo = (bond1->IsAromatic())? 1 : bond1->GetBondOrder(); // CJ: why was this line added? bo is never used? | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smilesformat.cpp: In member function 'void OpenBabel::OBMol2Cansmi::CreateFragCansmiString(OpenBabel::OBMol&, OpenBabel::OBBitVec&, std::string&)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smilesformat.cpp:3899:24: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3899 | for (int i=0; i::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3905 | for (int i=0; i >&, std::vector >&, std::__cxx11::basic_string, std::allocator >&)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smilesformat.cpp:2865:35: warning: '__snprintf_chk' output may be truncated before the last format character [-Wformat-truncation=] 2865 | snprintf(tcount, 10, "%d", hcount); | ^ In file included from /usr/include/stdio.h:866, from /usr/include/c++/10/cstdio:42, from /usr/include/c++/10/ext/string_conversions.h:43, from /usr/include/c++/10/bits/basic_string.h:6545, from /usr/include/c++/10/string:55, from /usr/include/c++/10/bits/locale_classes.h:40, from /usr/include/c++/10/bits/ios_base.h:41, from /usr/include/c++/10/ios:42, from /usr/include/c++/10/ostream:38, from /usr/include/c++/10/iostream:39, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/obconversion.h:24, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/obmolecformat.h:36, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smilesformat.cpp:23: /usr/include/bits/stdio2.h:70:35: note: '__snprintf_chk' output between 2 and 11 bytes into a destination of size 10 70 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smilesformat.cpp:2857:35: warning: '__snprintf_chk' output may be truncated before the last format character [-Wformat-truncation=] 2857 | snprintf(tcount, 10, "%d", i); | ^ In file included from /usr/include/stdio.h:866, from /usr/include/c++/10/cstdio:42, from /usr/include/c++/10/ext/string_conversions.h:43, from /usr/include/c++/10/bits/basic_string.h:6545, from /usr/include/c++/10/string:55, from /usr/include/c++/10/bits/locale_classes.h:40, from /usr/include/c++/10/bits/ios_base.h:41, from /usr/include/c++/10/ios:42, from /usr/include/c++/10/ostream:38, from /usr/include/c++/10/iostream:39, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/obconversion.h:24, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/obmolecformat.h:36, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smilesformat.cpp:23: /usr/include/bits/stdio2.h:70:35: note: '__snprintf_chk' output between 2 and 11 bytes into a destination of size 10 70 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 57%] Linking CXX shared module ../../lib64/exyzformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/exyzformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/exyzformat.so CMakeFiles/exyzformat.dir/exyzformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 57%] Built target exyzformat /usr/bin/gmake -f src/formats/CMakeFiles/fastsearchformat.dir/build.make src/formats/CMakeFiles/fastsearchformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/fastsearchformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/fastsearchformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/fastsearchformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/fastsearchformat.dir/depend.internal". Scanning dependencies of target fastsearchformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/fastsearchformat.dir/build.make src/formats/CMakeFiles/fastsearchformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 57%] Building CXX object src/formats/CMakeFiles/fastsearchformat.dir/fastsearchformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dfastsearchformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/fastsearchformat.dir/fastsearchformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/fastsearchformat.cpp [ 57%] Linking CXX shared module ../../lib64/smilesformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/smilesformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/smilesformat.so CMakeFiles/smilesformat.dir/smilesformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/fastsearchformat.cpp: In member function 'void OpenBabel::FastSearchFormat::AddPattern(std::vector&, OpenBabel::OBMol, int)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/fastsearchformat.cpp:690:11: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 690 | if(idx>=patternMol.NumBonds()) | ~~~^~~~~~~~~~~~~~~~~~~~~~~ [ 57%] Linking CXX shared module ../../lib64/fastsearchformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/fastsearchformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/fastsearchformat.so CMakeFiles/fastsearchformat.dir/fastsearchformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 57%] Built target fastsearchformat /usr/bin/gmake -f src/formats/CMakeFiles/fastaformat.dir/build.make src/formats/CMakeFiles/fastaformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/fastaformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/fastaformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/fastaformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/fastaformat.dir/depend.internal". Scanning dependencies of target fastaformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/fastaformat.dir/build.make src/formats/CMakeFiles/fastaformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 57%] Building CXX object src/formats/CMakeFiles/fastaformat.dir/fastaformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dfastaformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/fastaformat.dir/fastaformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/fastaformat.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/fastaformat.cpp: In function 'void OpenBabel::add_residue(OpenBabel::OBMol*, OpenBabel::OBResidue*, double, double, long unsigned int&, OpenBabel::ResidueRecord*, int, OpenBabel::OBAtom*&, bool, bool)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/fastaformat.cpp:394:33: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare] 394 | else if (atom_count > resBondFromOffset) | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 57%] Built target smilesformat /usr/bin/gmake -f src/formats/CMakeFiles/gromos96format.dir/build.make src/formats/CMakeFiles/gromos96format.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/gromos96format.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/gromos96format.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/gromos96format.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/gromos96format.dir/depend.internal". Scanning dependencies of target gromos96format gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/gromos96format.dir/build.make src/formats/CMakeFiles/gromos96format.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 57%] Building CXX object src/formats/CMakeFiles/gromos96format.dir/gromos96format.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dgromos96format_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/gromos96format.dir/gromos96format.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/gromos96format.cpp [ 57%] Linking CXX shared module ../../lib64/fastaformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/fastaformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/fastaformat.so CMakeFiles/fastaformat.dir/fastaformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 57%] Built target fastaformat /usr/bin/gmake -f src/formats/CMakeFiles/featformat.dir/build.make src/formats/CMakeFiles/featformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/featformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/featformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/featformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/featformat.dir/depend.internal". Scanning dependencies of target featformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/featformat.dir/build.make src/formats/CMakeFiles/featformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 57%] Building CXX object src/formats/CMakeFiles/featformat.dir/featformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dfeatformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/featformat.dir/featformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/featformat.cpp In file included from /usr/include/string.h:519, from /usr/include/c++/10/cstring:42, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/plugin.h:29, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/format.h:22, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/obconversion.h:37, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/obmolecformat.h:36, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/gromos96format.cpp:54: In function 'strncpy', inlined from 'OpenBabel::GROMOS96Format::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)' at /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/gromos96format.cpp:144:20: /usr/include/bits/string_fortified.h:106:34: warning: 'strncpy' specified bound 16 equals destination size [-Wstringop-truncation] 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'strncpy', inlined from 'OpenBabel::GROMOS96Format::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)' at /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/gromos96format.cpp:136:20: /usr/include/bits/string_fortified.h:106:34: warning: 'strncpy' specified bound 16 equals destination size [-Wstringop-truncation] 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'strncpy', inlined from 'OpenBabel::GROMOS96Format::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)' at /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/gromos96format.cpp:138:20: /usr/include/bits/string_fortified.h:106:34: warning: 'strncpy' specified bound 16 equals destination size [-Wstringop-truncation] 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 57%] Linking CXX shared module ../../lib64/gromos96format.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/gromos96format.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/gromos96format.so CMakeFiles/gromos96format.dir/gromos96format.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 57%] Built target gromos96format /usr/bin/gmake -f src/formats/CMakeFiles/fingerprintformat.dir/build.make src/formats/CMakeFiles/fingerprintformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/fingerprintformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/fingerprintformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/fingerprintformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/fingerprintformat.dir/depend.internal". Scanning dependencies of target fingerprintformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/fingerprintformat.dir/build.make src/formats/CMakeFiles/fingerprintformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 57%] Building CXX object src/formats/CMakeFiles/fingerprintformat.dir/fingerprintformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dfingerprintformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/fingerprintformat.dir/fingerprintformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/fingerprintformat.cpp [ 57%] Linking CXX shared module ../../lib64/featformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/featformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/featformat.so CMakeFiles/featformat.dir/featformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 57%] Built target featformat /usr/bin/gmake -f src/formats/CMakeFiles/molreport.dir/build.make src/formats/CMakeFiles/molreport.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/molreport.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/molreport.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/molreport.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/molreport.dir/depend.internal". Scanning dependencies of target molreport gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/molreport.dir/build.make src/formats/CMakeFiles/molreport.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 57%] Building CXX object src/formats/CMakeFiles/molreport.dir/molreport.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dmolreport_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/molreport.dir/molreport.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/molreport.cpp [ 57%] Linking CXX shared module ../../lib64/fingerprintformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/fingerprintformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/fingerprintformat.so CMakeFiles/fingerprintformat.dir/fingerprintformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread [ 57%] Linking CXX shared module ../../lib64/molreport.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/molreport.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/molreport.so CMakeFiles/molreport.dir/molreport.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 57%] Built target molreport /usr/bin/gmake -f src/formats/CMakeFiles/fhformat.dir/build.make src/formats/CMakeFiles/fhformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix 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Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/fhformat.dir/depend.internal". gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/chemdoodlejsonformat.dir/DependInfo.cmake --color= Scanning dependencies of target fhformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/fhformat.dir/build.make src/formats/CMakeFiles/fhformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/chemdoodlejsonformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/chemdoodlejsonformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/chemdoodlejsonformat.dir/depend.internal". [ 57%] Building CXX object src/formats/CMakeFiles/fhformat.dir/fhformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dfhformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/fhformat.dir/fhformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/fhformat.cpp Scanning dependencies of target chemdoodlejsonformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/chemdoodlejsonformat.dir/build.make src/formats/CMakeFiles/chemdoodlejsonformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 57%] Building CXX object src/formats/CMakeFiles/chemdoodlejsonformat.dir/json/chemdoodlejsonformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dchemdoodlejsonformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/chemdoodlejsonformat.dir/json/chemdoodlejsonformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/json/chemdoodlejsonformat.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/json/chemdoodlejsonformat.cpp: In member function 'virtual bool OpenBabel::ChemDoodleJSONFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/json/chemdoodlejsonformat.cpp:115:30: warning: comparison of integer expressions of different signedness: 'rapidjson::SizeType' {aka 'unsigned int'} and 'int' [-Wsign-compare] 115 | if (inRoot["m"].Size() > currentMolIndex) { | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ [ 58%] Linking CXX shared module ../../lib64/fhformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/fhformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/fhformat.so CMakeFiles/fhformat.dir/fhformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 58%] Built target fhformat /usr/bin/gmake -f src/formats/CMakeFiles/cacheformat.dir/build.make src/formats/CMakeFiles/cacheformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats 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Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/cacheformat.dir/depend.internal". Scanning dependencies of target cacheformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/cacheformat.dir/build.make src/formats/CMakeFiles/cacheformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 59%] Building CXX object src/formats/CMakeFiles/cacheformat.dir/cacheformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcacheformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/cacheformat.dir/cacheformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/cacheformat.cpp [ 59%] Linking CXX shared module ../../lib64/cacheformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cacheformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/cacheformat.so CMakeFiles/cacheformat.dir/cacheformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 59%] Built target cacheformat /usr/bin/gmake -f src/formats/CMakeFiles/fpsformat.dir/build.make src/formats/CMakeFiles/fpsformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/fpsformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/fpsformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/fpsformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/fpsformat.dir/depend.internal". Scanning dependencies of target fpsformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/fpsformat.dir/build.make src/formats/CMakeFiles/fpsformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 60%] Building CXX object src/formats/CMakeFiles/fpsformat.dir/fpsformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dfpsformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/fpsformat.dir/fpsformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/fpsformat.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/fpsformat.cpp: In member function 'virtual bool OpenBabel::FPSFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/fpsformat.cpp:152:21: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] 152 | for(unsigned i=0;i<(_nbits+31)/32;++i) | ~^~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/fpsformat.cpp: In member function 'std::string OpenBabel::FPSFormat::getTimeStr()': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/fpsformat.cpp:175:10: warning: variable 'time_res' set but not used [-Wunused-but-set-variable] 175 | size_t time_res; /* Result of strftime */ | ^~~~~~~~ [ 60%] Linking CXX shared module ../../lib64/fpsformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/fpsformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/fpsformat.so CMakeFiles/fpsformat.dir/fpsformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 60%] Built target fpsformat /usr/bin/gmake -f src/formats/CMakeFiles/freefracformat.dir/build.make src/formats/CMakeFiles/freefracformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/freefracformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/freefracformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/freefracformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/freefracformat.dir/depend.internal". Scanning dependencies of target freefracformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/freefracformat.dir/build.make src/formats/CMakeFiles/freefracformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 60%] Building CXX object src/formats/CMakeFiles/freefracformat.dir/freefracformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dfreefracformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/freefracformat.dir/freefracformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/freefracformat.cpp [ 60%] Linking CXX shared module ../../lib64/chemdoodlejsonformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/chemdoodlejsonformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/chemdoodlejsonformat.so CMakeFiles/chemdoodlejsonformat.dir/json/chemdoodlejsonformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread [ 60%] Linking CXX shared module ../../lib64/freefracformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/freefracformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/freefracformat.so CMakeFiles/freefracformat.dir/freefracformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 60%] Built target freefracformat /usr/bin/gmake -f src/formats/CMakeFiles/crystal09format.dir/build.make src/formats/CMakeFiles/crystal09format.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/crystal09format.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/crystal09format.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/crystal09format.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/crystal09format.dir/depend.internal". Scanning dependencies of target crystal09format gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/crystal09format.dir/build.make src/formats/CMakeFiles/crystal09format.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 60%] Building CXX object src/formats/CMakeFiles/crystal09format.dir/crystal09format.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcrystal09format_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/crystal09format.dir/crystal09format.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/crystal09format.cpp gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 60%] Built target chemdoodlejsonformat /usr/bin/gmake -f src/formats/CMakeFiles/groformat.dir/build.make src/formats/CMakeFiles/groformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/groformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/groformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/groformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/groformat.dir/depend.internal". Scanning dependencies of target groformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/groformat.dir/build.make src/formats/CMakeFiles/groformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 60%] Building CXX object src/formats/CMakeFiles/groformat.dir/groformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dgroformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/groformat.dir/groformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/groformat.cpp [ 61%] Linking CXX shared module ../../lib64/crystal09format.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/crystal09format.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/crystal09format.so CMakeFiles/crystal09format.dir/crystal09format.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/groformat.cpp: In member function 'OpenBabel::GROFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/groformat.cpp:278:19: warning: 'res' may be used uninitialized in this function [-Wmaybe-uninitialized] 278 | res->AddAtom(atom); | ~~~~~~~~~~~~^~~~~~ [ 61%] Linking CXX shared module ../../lib64/groformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/groformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/groformat.so CMakeFiles/groformat.dir/groformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 61%] Built target crystal09format /usr/bin/gmake -f src/formats/CMakeFiles/smileyformat.dir/build.make src/formats/CMakeFiles/smileyformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/smileyformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/smileyformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/smileyformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/smileyformat.dir/depend.internal". Scanning dependencies of target smileyformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/smileyformat.dir/build.make src/formats/CMakeFiles/smileyformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 61%] Building CXX object src/formats/CMakeFiles/smileyformat.dir/smileyformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dsmileyformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/smileyformat.dir/smileyformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smileyformat.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smileyformat.cpp: In member function 'void OpenBabel::OpenBabelCallback::setChiral(int, Smiley::Chirality, const std::vector&)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smileyformat.cpp:158:14: warning: enumeration value 'NotChiral' not handled in switch [-Wswitch] 158 | switch (chirality) { | ^ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smileyformat.cpp:158:14: warning: enumeration value 'TH1' not handled in switch [-Wswitch] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smileyformat.cpp:158:14: warning: enumeration value 'TH2' not handled in switch [-Wswitch] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smileyformat.cpp:158:14: warning: enumeration value 'AL1' not handled in switch [-Wswitch] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smileyformat.cpp:158:14: warning: enumeration value 'AL2' not handled in switch [-Wswitch] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smileyformat.cpp:158:14: warning: enumeration value 'SP1' not handled in switch [-Wswitch] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smileyformat.cpp:158:14: warning: enumeration value 'SP2' not handled in switch [-Wswitch] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smileyformat.cpp:158:14: warning: enumeration value 'SP3' not handled in switch [-Wswitch] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smileyformat.cpp:158:14: warning: enumeration value 'TB1' not handled in switch [-Wswitch] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smileyformat.cpp:158:14: warning: enumeration value 'TB2' not handled in switch [-Wswitch] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smileyformat.cpp:158:14: warning: enumeration value 'TB3' not handled in switch [-Wswitch] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smileyformat.cpp:158:14: warning: enumeration value 'TB4' not handled in switch [-Wswitch] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smileyformat.cpp:158:14: warning: enumeration value 'TB5' not handled in switch [-Wswitch] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smileyformat.cpp:158:14: warning: enumeration value 'TB6' not handled in switch [-Wswitch] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smileyformat.cpp:158:14: warning: enumeration value 'TB7' not handled in switch [-Wswitch] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smileyformat.cpp:158:14: warning: enumeration value 'TB8' not handled in switch [-Wswitch] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smileyformat.cpp:158:14: warning: enumeration value 'TB9' not handled in switch [-Wswitch] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smileyformat.cpp:158:14: warning: enumeration value 'TB10' not handled in switch [-Wswitch] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smileyformat.cpp:158:14: warning: enumeration value 'TB11' not handled in switch [-Wswitch] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smileyformat.cpp:158:14: warning: enumeration value 'TB12' not handled in switch [-Wswitch] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smileyformat.cpp:158:14: warning: enumeration value 'TB13' not handled in switch [-Wswitch] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smileyformat.cpp:158:14: warning: enumeration value 'TB14' not handled in switch [-Wswitch] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smileyformat.cpp:158:14: warning: enumeration value 'TB15' not handled in switch [-Wswitch] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smileyformat.cpp:158:14: warning: enumeration value 'TB16' not handled in switch [-Wswitch] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smileyformat.cpp:158:14: warning: enumeration value 'TB17' not handled in switch [-Wswitch] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smileyformat.cpp:158:14: warning: enumeration value 'TB18' not handled in switch [-Wswitch] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smileyformat.cpp:158:14: warning: enumeration value 'TB19' not handled in switch [-Wswitch] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smileyformat.cpp:158:14: warning: enumeration value 'TB20' not handled in switch [-Wswitch] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smileyformat.cpp:158:14: warning: enumeration value 'OH1' not handled in switch [-Wswitch] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smileyformat.cpp:158:14: warning: enumeration value 'OH2' not handled in switch [-Wswitch] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smileyformat.cpp:158:14: warning: enumeration value 'OH3' not handled in switch [-Wswitch] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smileyformat.cpp:158:14: warning: enumeration value 'OH4' not handled in switch [-Wswitch] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smileyformat.cpp:158:14: warning: enumeration value 'OH5' not handled in switch [-Wswitch] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smileyformat.cpp:158:14: warning: enumeration value 'OH6' not handled in switch [-Wswitch] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smileyformat.cpp:158:14: warning: enumeration value 'OH7' not handled in switch [-Wswitch] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smileyformat.cpp:158:14: warning: enumeration value 'OH8' not handled in switch [-Wswitch] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smileyformat.cpp:158:14: warning: enumeration value 'OH9' not handled in switch [-Wswitch] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smileyformat.cpp:158:14: warning: enumeration value 'OH10' not handled in switch [-Wswitch] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smileyformat.cpp:158:14: warning: enumeration value 'OH11' not handled in switch [-Wswitch] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smileyformat.cpp:158:14: warning: enumeration value 'OH12' not handled in switch [-Wswitch] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smileyformat.cpp:158:14: warning: enumeration value 'OH13' not handled in switch [-Wswitch] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smileyformat.cpp:158:14: warning: enumeration value 'OH14' not handled in switch [-Wswitch] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smileyformat.cpp:158:14: warning: enumeration value 'OH15' not handled in switch [-Wswitch] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smileyformat.cpp:158:14: warning: enumeration value 'OH16' not handled in switch [-Wswitch] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smileyformat.cpp:158:14: warning: enumeration value 'OH17' not handled in switch [-Wswitch] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smileyformat.cpp:158:14: warning: enumeration value 'OH18' not handled in switch [-Wswitch] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smileyformat.cpp:158:14: warning: enumeration value 'OH19' not handled in switch [-Wswitch] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smileyformat.cpp:158:14: warning: enumeration value 'OH20' not handled in switch [-Wswitch] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smileyformat.cpp:158:14: warning: enumeration value 'OH21' not handled in switch [-Wswitch] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smileyformat.cpp:158:14: warning: enumeration value 'OH22' not handled in switch [-Wswitch] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smileyformat.cpp:158:14: warning: enumeration value 'OH23' not handled in switch [-Wswitch] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smileyformat.cpp:158:14: warning: enumeration value 'OH24' not handled in switch [-Wswitch] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smileyformat.cpp:158:14: warning: enumeration value 'OH25' not handled in switch [-Wswitch] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smileyformat.cpp:158:14: warning: enumeration value 'OH26' not handled in switch [-Wswitch] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smileyformat.cpp:158:14: warning: enumeration value 'OH27' not handled in switch [-Wswitch] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smileyformat.cpp:158:14: warning: enumeration value 'OH28' not handled in switch [-Wswitch] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smileyformat.cpp:158:14: warning: enumeration value 'OH29' not handled in switch [-Wswitch] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smileyformat.cpp:158:14: warning: enumeration value 'OH30' not handled in switch [-Wswitch] In file included from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smileyformat.cpp:26: /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smiley.h: In instantiation of 'void Smiley::Parser::processStereochemistry() [with Callback = OpenBabel::OpenBabelCallback]': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smiley.h:2707:9: required from 'void Smiley::Parser::parse(const string&) [with Callback = OpenBabel::OpenBabelCallback; std::string = std::__cxx11::basic_string]' /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smileyformat.cpp:370:26: required from here /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smiley.h:2642:43: warning: comparison of integer expressions of different signedness: 'std::vector::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare] 2642 | if (m_chiralInfo[i].nbrs.size() != expectedValence && m_exceptions & InvalidChiralValence) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smiley.h: In instantiation of 'Smiley::Parser::RingBondInfo::RingBondInfo(int, int, bool, bool, bool, std::size_t) [with Callback = OpenBabel::OpenBabelCallback; std::size_t = long unsigned int]': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smiley.h:2409:41: required from 'void Smiley::Parser::processRingBond(int, std::size_t) [with Callback = OpenBabel::OpenBabelCallback; std::size_t = long unsigned int]' /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smiley.h:2429:11: required from 'void Smiley::Parser::parseRingBond() [with Callback = OpenBabel::OpenBabelCallback]' /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smiley.h:2507:13: required from 'void Smiley::Parser::parseChain() [with Callback = OpenBabel::OpenBabelCallback]' /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smiley.h:2698:9: required from 'void Smiley::Parser::parse(const string&) [with Callback = OpenBabel::OpenBabelCallback; std::string = std::__cxx11::basic_string]' /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smileyformat.cpp:370:26: required from here /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smiley.h:986:14: warning: 'Smiley::Parser::RingBondInfo::isExplicit' will be initialized after [-Wreorder] 986 | bool isExplicit; | ^~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smiley.h:981:21: warning: 'std::size_t Smiley::Parser::RingBondInfo::pos' [-Wreorder] 981 | std::size_t pos; | ^~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/smiley.h:974:9: warning: when initialized here [-Wreorder] 974 | RingBondInfo(int number_, int order_, bool isUp_, bool isDown_, | ^~~~~~~~~~~~ gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 61%] Built target groformat /usr/bin/gmake -f src/formats/CMakeFiles/vaspformat.dir/build.make src/formats/CMakeFiles/vaspformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/vaspformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/vaspformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/vaspformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/vaspformat.dir/depend.internal". Scanning dependencies of target vaspformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/vaspformat.dir/build.make src/formats/CMakeFiles/vaspformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 61%] Building CXX object src/formats/CMakeFiles/vaspformat.dir/vaspformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dvaspformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/vaspformat.dir/vaspformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/vaspformat.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/vaspformat.cpp: In member function 'virtual bool OpenBabel::VASPFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/vaspformat.cpp:451:17: warning: unused variable 'freqnum' [-Wunused-variable] 451 | int freqnum = atoi(vs[0].c_str()); | ^~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/vaspformat.cpp: In member function 'virtual bool OpenBabel::VASPFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/vaspformat.cpp:668:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 668 | for(int i = 0; i < atoms_sorted.size(); i++) | ~~^~~~~~~~~~~~~~~~~~~~~ [ 62%] Linking CXX shared module ../../lib64/smileyformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/smileyformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/smileyformat.so CMakeFiles/smileyformat.dir/smileyformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/vaspformat.cpp: In member function 'OpenBabel::VASPFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/vaspformat.cpp:410:21: warning: 'fermi' may be used uninitialized in this function [-Wmaybe-uninitialized] 410 | dos->SetData(fermi, energies, densities, integration); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 62%] Linking CXX shared module ../../lib64/vaspformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/vaspformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/vaspformat.so CMakeFiles/vaspformat.dir/vaspformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 62%] Built target smileyformat /usr/bin/gmake -f src/formats/CMakeFiles/ghemicalformat.dir/build.make src/formats/CMakeFiles/ghemicalformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/ghemicalformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/ghemicalformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/ghemicalformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/ghemicalformat.dir/depend.internal". Scanning dependencies of target ghemicalformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/ghemicalformat.dir/build.make src/formats/CMakeFiles/ghemicalformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 62%] Building CXX object src/formats/CMakeFiles/ghemicalformat.dir/ghemicalformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dghemicalformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/ghemicalformat.dir/ghemicalformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/ghemicalformat.cpp [ 63%] Linking CXX shared module ../../lib64/ghemicalformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/ghemicalformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/ghemicalformat.so CMakeFiles/ghemicalformat.dir/ghemicalformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 63%] Built target ghemicalformat /usr/bin/gmake -f src/formats/CMakeFiles/lmpdatformat.dir/build.make src/formats/CMakeFiles/lmpdatformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/lmpdatformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/lmpdatformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/lmpdatformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/lmpdatformat.dir/depend.internal". Scanning dependencies of target lmpdatformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/lmpdatformat.dir/build.make src/formats/CMakeFiles/lmpdatformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 64%] Building CXX object src/formats/CMakeFiles/lmpdatformat.dir/lmpdatformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dlmpdatformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/lmpdatformat.dir/lmpdatformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/lmpdatformat.cpp gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 64%] Built target vaspformat /usr/bin/gmake -f src/formats/CMakeFiles/cssrformat.dir/build.make src/formats/CMakeFiles/cssrformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/cssrformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/cssrformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/cssrformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/cssrformat.dir/depend.internal". Scanning dependencies of target cssrformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/cssrformat.dir/build.make src/formats/CMakeFiles/cssrformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 64%] Building CXX object src/formats/CMakeFiles/cssrformat.dir/cssrformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcssrformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/cssrformat.dir/cssrformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/cssrformat.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/lmpdatformat.cpp: In member function 'virtual bool OpenBabel::LMPDATFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/lmpdatformat.cpp:277:13: warning: unused variable 'length' [-Wunused-variable] 277 | double length=cmax-cmin; | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/lmpdatformat.cpp:367:11: warning: unused variable 'atomid' [-Wunused-variable] 367 | int atomid=5; | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/lmpdatformat.cpp:368:14: warning: unused variable 'charge' [-Wunused-variable] 368 | double charge=0.5; | ^~~~~~ [ 64%] Linking CXX shared module ../../lib64/cssrformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cssrformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/cssrformat.so CMakeFiles/cssrformat.dir/cssrformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/lmpdatformat.cpp:534:38: warning: '%11s' directive output may be truncated writing between 11 and 32767 bytes into a region of size between 32695 and 32736 [-Wformat-truncation=] 534 | "%-4d %4d %4d %4d %4d %4d # %11s\n", | ^~~~ ...... 541 | DihedralString); | ~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:866, from /usr/include/c++/10/cstdio:42, from /usr/include/c++/10/ext/string_conversions.h:43, from /usr/include/c++/10/bits/basic_string.h:6545, from /usr/include/c++/10/string:55, from /usr/include/c++/10/bits/locale_classes.h:40, from /usr/include/c++/10/bits/ios_base.h:41, from /usr/include/c++/10/ios:42, from /usr/include/c++/10/ostream:38, from /usr/include/c++/10/iostream:39, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/obconversion.h:24, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/obmolecformat.h:36, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/lmpdatformat.cpp:15: /usr/include/bits/stdio2.h:70:35: note: '__snprintf_chk' output between 45 and 32842 bytes into a destination of size 32768 70 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/lmpdatformat.cpp:516:38: warning: '%11s' directive output may be truncated writing between 11 and 32767 bytes into a region of size between 32695 and 32736 [-Wformat-truncation=] 516 | "%-4d %4d %4d %4d %4d %4d # %11s\n", | ^~~~ ...... 523 | DihedralString); | ~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:866, from /usr/include/c++/10/cstdio:42, from /usr/include/c++/10/ext/string_conversions.h:43, from /usr/include/c++/10/bits/basic_string.h:6545, from /usr/include/c++/10/string:55, from /usr/include/c++/10/bits/locale_classes.h:40, from /usr/include/c++/10/bits/ios_base.h:41, from /usr/include/c++/10/ios:42, from /usr/include/c++/10/ostream:38, from /usr/include/c++/10/iostream:39, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/obconversion.h:24, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/obmolecformat.h:36, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/lmpdatformat.cpp:15: /usr/include/bits/stdio2.h:70:35: note: '__snprintf_chk' output between 45 and 32842 bytes into a destination of size 32768 70 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/lmpdatformat.cpp:474:33: warning: '%8s' directive output may be truncated writing between 8 and 32767 bytes into a region of size between 32707 and 32741 [-Wformat-truncation=] 474 | "%-4d %4d %4d %4d %4d # %8s\n", | ^~~ ...... 480 | AngleString); | ~~~~~~~~~~~ In file included from /usr/include/stdio.h:866, from /usr/include/c++/10/cstdio:42, from /usr/include/c++/10/ext/string_conversions.h:43, from /usr/include/c++/10/bits/basic_string.h:6545, from /usr/include/c++/10/string:55, from /usr/include/c++/10/bits/locale_classes.h:40, from /usr/include/c++/10/bits/ios_base.h:41, from /usr/include/c++/10/ios:42, from /usr/include/c++/10/ostream:38, from /usr/include/c++/10/iostream:39, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/obconversion.h:24, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/obmolecformat.h:36, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/lmpdatformat.cpp:15: /usr/include/bits/stdio2.h:70:35: note: '__snprintf_chk' output between 37 and 32830 bytes into a destination of size 32768 70 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/lmpdatformat.cpp:458:33: warning: '%8s' directive output may be truncated writing between 8 and 32767 bytes into a region of size between 32707 and 32741 [-Wformat-truncation=] 458 | "%-4d %4d %4d %4d %4d # %8s\n", | ^~~ ...... 464 | AngleString); | ~~~~~~~~~~~ In file included from /usr/include/stdio.h:866, from /usr/include/c++/10/cstdio:42, from /usr/include/c++/10/ext/string_conversions.h:43, from /usr/include/c++/10/bits/basic_string.h:6545, from /usr/include/c++/10/string:55, from /usr/include/c++/10/bits/locale_classes.h:40, from /usr/include/c++/10/bits/ios_base.h:41, from /usr/include/c++/10/ios:42, from /usr/include/c++/10/ostream:38, from /usr/include/c++/10/iostream:39, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/obconversion.h:24, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/obmolecformat.h:36, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/lmpdatformat.cpp:15: /usr/include/bits/stdio2.h:70:35: note: '__snprintf_chk' output between 37 and 32830 bytes into a destination of size 32768 70 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 64%] Built target cssrformat /usr/bin/gmake -f src/formats/CMakeFiles/msmsformat.dir/build.make src/formats/CMakeFiles/msmsformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/msmsformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/msmsformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/msmsformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/msmsformat.dir/depend.internal". Scanning dependencies of target msmsformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/msmsformat.dir/build.make src/formats/CMakeFiles/msmsformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 64%] Building CXX object src/formats/CMakeFiles/msmsformat.dir/msmsformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dmsmsformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/msmsformat.dir/msmsformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/msmsformat.cpp [ 64%] Linking CXX shared module ../../lib64/lmpdatformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/lmpdatformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/lmpdatformat.so CMakeFiles/lmpdatformat.dir/lmpdatformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl 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CMakeFiles/msmsformat.dir/msmsformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 64%] Built target msmsformat /usr/bin/gmake -f src/formats/CMakeFiles/lpmdformat.dir/build.make src/formats/CMakeFiles/lpmdformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/lpmdformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/lpmdformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/lpmdformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/lpmdformat.dir/depend.internal". Scanning dependencies of target lpmdformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/lpmdformat.dir/build.make src/formats/CMakeFiles/lpmdformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 64%] Building CXX object src/formats/CMakeFiles/lpmdformat.dir/lpmdformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dlpmdformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/lpmdformat.dir/lpmdformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/lpmdformat.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/lpmdformat.cpp: In member function 'virtual bool OpenBabel::LpmdFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/lpmdformat.cpp:196:27: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 196 | if(int(headers.size()-1)!=tokens.size()) | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/lpmdformat.cpp:210:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 210 | for(int i=1 ; i < headers.size() ; ++i) //the first element is HDR | ~~^~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/lpmdformat.cpp:243:11: warning: unused variable 'FX' [-Wunused-variable] 243 | double FX = AX/mass; double FY = AY/mass; double FZ = AZ/mass; | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/lpmdformat.cpp:243:32: warning: unused variable 'FY' [-Wunused-variable] 243 | double FX = AX/mass; double FY = AY/mass; double FZ = AZ/mass; | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/lpmdformat.cpp:243:53: warning: unused variable 'FZ' [-Wunused-variable] 243 | double FX = AX/mass; double FY = AY/mass; double FZ = AZ/mass; | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/lpmdformat.cpp: In member function 'virtual bool OpenBabel::LpmdFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/lpmdformat.cpp:366:18: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 366 | for(int i=0; i < mol.NumAtoms() ; ++i) | ~~^~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/lpmdformat.cpp:382:15: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 382 | for(int i=0;i&, unsigned int, bool, bool)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/pdbqtformat.cpp:581:20: warning: unused variable 'child' [-Wunused-variable] 581 | unsigned int child=i; | ^~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/pdbqtformat.cpp: In function 'bool OpenBabel::Separate_preserve_charges(OpenBabel::OBMol&, std::vector&)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/pdbqtformat.cpp:797:9: warning: unused variable 'fragments' [-Wunused-variable] 797 | int fragments = 0; | ^~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/pdbqtformat.cpp: At global scope: /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/pdbqtformat.cpp:750:16: warning: 'unsigned int OpenBabel::AtomsSoFar(const std::map&, unsigned int)' defined but not used [-Wunused-function] 750 | unsigned int AtomsSoFar(const map & tree, unsigned int depth) | ^~~~~~~~~~ [ 66%] Linking CXX shared module ../../lib64/siestaformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/siestaformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/siestaformat.so CMakeFiles/siestaformat.dir/siestaformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/pdbqtformat.cpp: In function 'OpenBabel::OutputAtom(OpenBabel::OBAtom*, std::basic_ostream >&, unsigned int)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/pdbqtformat.cpp:345:52: warning: '__snprintf_chk' output may be truncated before the last format character [-Wformat-truncation=] 345 | snprintf(type_name, sizeof(type_name), " %-3s", tmp); | ^ In file included from /usr/include/stdio.h:866, from /usr/include/c++/10/cstdio:42, from /usr/include/c++/10/ext/string_conversions.h:43, from /usr/include/c++/10/bits/basic_string.h:6545, from /usr/include/c++/10/string:55, from /usr/include/c++/10/bits/locale_classes.h:40, from /usr/include/c++/10/bits/ios_base.h:41, from /usr/include/c++/10/ios:42, from /usr/include/c++/10/ostream:38, from /usr/include/c++/10/iostream:39, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/obconversion.h:24, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/obmolecformat.h:36, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/pdbqtformat.cpp:24: /usr/include/bits/stdio2.h:70:35: note: '__snprintf_chk' output between 5 and 11 bytes into a destination of size 10 70 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/pdbqtformat.cpp:363:60: warning: '__snprintf_chk' output may be truncated before the last format character [-Wformat-truncation=] 363 | snprintf(padded_name, sizeof(padded_name), " %-3s", tmp); | ^ In file included from /usr/include/stdio.h:866, from /usr/include/c++/10/cstdio:42, from /usr/include/c++/10/ext/string_conversions.h:43, from /usr/include/c++/10/bits/basic_string.h:6545, from /usr/include/c++/10/string:55, from /usr/include/c++/10/bits/locale_classes.h:40, from /usr/include/c++/10/bits/ios_base.h:41, from /usr/include/c++/10/ios:42, from /usr/include/c++/10/ostream:38, from /usr/include/c++/10/iostream:39, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/obconversion.h:24, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/obmolecformat.h:36, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/pdbqtformat.cpp:24: /usr/include/bits/stdio2.h:70:35: note: '__snprintf_chk' output between 5 and 11 bytes into a destination of size 10 70 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 66%] Built target siestaformat /usr/bin/gmake -f src/formats/CMakeFiles/msiformat.dir/build.make src/formats/CMakeFiles/msiformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/msiformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/msiformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/msiformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/msiformat.dir/depend.internal". Scanning dependencies of target msiformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/msiformat.dir/build.make src/formats/CMakeFiles/msiformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 66%] Building CXX object src/formats/CMakeFiles/msiformat.dir/msiformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dmsiformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/msiformat.dir/msiformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/msiformat.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/msiformat.cpp: In member function 'virtual bool OpenBabel::MSIFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/msiformat.cpp:77:17: warning: unused variable 'title' [-Wunused-variable] 77 | const char* title = pConv->GetTitle(); | ^~~~~ In file included from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/msiformat.cpp:19: /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/generic.h:359:60: warning: 'sg' may be used uninitialized in this function [-Wmaybe-uninitialized] 359 | void SetSpaceGroup(const SpaceGroup* sg) { _spaceGroup = sg; } | ~~~~~~~~~~~~^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/msiformat.cpp:112:23: note: 'sg' was declared here 112 | const SpaceGroup *sg; | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/msiformat.cpp:193:28: warning: 'atom' may be used uninitialized in this function [-Wmaybe-uninitialized] 193 | atom->SetVector(atof(vs[3].c_str()), | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ 194 | atof(vs[4].c_str()), | ~~~~~~~~~~~~~~~~~~~~ 195 | atof(vs[5].c_str())); | ~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/msiformat.cpp:239:24: warning: 'bondOrder' may be used uninitialized in this function [-Wmaybe-uninitialized] 239 | mol.AddBond(startBondAtom - 1, endBondAtom - 1, bondOrder); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/msiformat.cpp:239:56: warning: 'endBondAtom' may be used uninitialized in this function [-Wmaybe-uninitialized] 239 | mol.AddBond(startBondAtom - 1, endBondAtom - 1, bondOrder); | ~~~~~~~~~~~~^~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/msiformat.cpp:239:39: warning: 'startBondAtom' may be used uninitialized in this function [-Wmaybe-uninitialized] 239 | mol.AddBond(startBondAtom - 1, endBondAtom - 1, bondOrder); | ~~~~~~~~~~~~~~^~~ [ 66%] Linking CXX shared module ../../lib64/msiformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/msiformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/msiformat.so CMakeFiles/msiformat.dir/msiformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread In file included from /usr/include/string.h:519, from /usr/include/c++/10/cstring:42, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/plugin.h:29, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/format.h:22, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/obconversion.h:37, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/obmolecformat.h:36, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/pdbqtformat.cpp:24: In function 'strncpy', inlined from 'OpenBabel::PDBQTFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)' at /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/pdbqtformat.cpp:923:22: /usr/include/bits/string_fortified.h:106:34: warning: 'strncpy' specified bound 10 equals destination size [-Wstringop-truncation] 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 66%] Built target msiformat /usr/bin/gmake -f src/formats/CMakeFiles/rinchiformat.dir/build.make src/formats/CMakeFiles/rinchiformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/rinchiformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/rinchiformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/rinchiformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/rinchiformat.dir/depend.internal". Scanning dependencies of target rinchiformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/rinchiformat.dir/build.make src/formats/CMakeFiles/rinchiformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 67%] Building CXX object src/formats/CMakeFiles/rinchiformat.dir/rinchiformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Drinchiformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/rinchiformat.dir/rinchiformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/rinchiformat.cpp [ 67%] Linking CXX shared module ../../lib64/pdbqtformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pdbqtformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/pdbqtformat.so CMakeFiles/pdbqtformat.dir/pdbqtformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz 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CMakeFiles/rinchiformat.dir/rinchiformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 67%] Built target rinchiformat /usr/bin/gmake -f src/formats/CMakeFiles/mpdformat.dir/build.make src/formats/CMakeFiles/mpdformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/mpdformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/mpdformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/mpdformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/mpdformat.dir/depend.internal". Scanning dependencies of target mpdformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/mpdformat.dir/build.make src/formats/CMakeFiles/mpdformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 67%] Building CXX object src/formats/CMakeFiles/mpdformat.dir/mpdformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dmpdformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/mpdformat.dir/mpdformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/mpdformat.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/mpdformat.cpp: In member function 'virtual bool OpenBabel::MPDFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/mpdformat.cpp:210:42: warning: variable 'idx_true' set but not used [-Wunused-but-set-variable] 210 | bool xml_true=false, pre_true=false, idx_true=false; | ^~~~~~~~ gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 67%] Built target pdbqtformat /usr/bin/gmake -f src/formats/CMakeFiles/pointcloudformat.dir/build.make src/formats/CMakeFiles/pointcloudformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/pointcloudformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/pointcloudformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/pointcloudformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/pointcloudformat.dir/depend.internal". Scanning dependencies of target pointcloudformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/pointcloudformat.dir/build.make src/formats/CMakeFiles/pointcloudformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 67%] Building CXX object src/formats/CMakeFiles/pointcloudformat.dir/pointcloudformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpointcloudformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/pointcloudformat.dir/pointcloudformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/pointcloudformat.cpp [ 67%] Linking CXX shared module ../../lib64/mpdformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mpdformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/mpdformat.so CMakeFiles/mpdformat.dir/mpdformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/pointcloudformat.cpp: In member function 'virtual bool OpenBabel::PointCloudFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/pointcloudformat.cpp:226:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 226 | for( int j = 0; j < radius_mult_list.size(); j++ ) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~ gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 67%] Built target mpdformat /usr/bin/gmake -f src/formats/CMakeFiles/shelxformat.dir/build.make src/formats/CMakeFiles/shelxformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/shelxformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/shelxformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/shelxformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/shelxformat.dir/depend.internal". Scanning dependencies of target shelxformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/shelxformat.dir/build.make src/formats/CMakeFiles/shelxformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 67%] Building CXX object src/formats/CMakeFiles/shelxformat.dir/shelxformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dshelxformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/shelxformat.dir/shelxformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/shelxformat.cpp [ 67%] Linking CXX shared module ../../lib64/pointcloudformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pointcloudformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/pointcloudformat.so CMakeFiles/pointcloudformat.dir/pointcloudformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 67%] Built target pointcloudformat /usr/bin/gmake -f src/formats/CMakeFiles/unichemformat.dir/build.make src/formats/CMakeFiles/unichemformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/unichemformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/unichemformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/unichemformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/unichemformat.dir/depend.internal". Scanning dependencies of target unichemformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/unichemformat.dir/build.make src/formats/CMakeFiles/unichemformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 67%] Building CXX object src/formats/CMakeFiles/unichemformat.dir/unichemformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dunichemformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/unichemformat.dir/unichemformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/unichemformat.cpp [ 67%] Linking CXX shared module ../../lib64/shelxformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/shelxformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/shelxformat.so CMakeFiles/shelxformat.dir/shelxformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 67%] Built target shelxformat /usr/bin/gmake -f src/formats/CMakeFiles/opendxformat.dir/build.make src/formats/CMakeFiles/opendxformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/opendxformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/opendxformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/opendxformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/opendxformat.dir/depend.internal". Scanning dependencies of target opendxformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/opendxformat.dir/build.make src/formats/CMakeFiles/opendxformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 67%] Building CXX object src/formats/CMakeFiles/opendxformat.dir/opendxformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dopendxformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/opendxformat.dir/opendxformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/opendxformat.cpp [ 68%] Linking CXX shared module ../../lib64/unichemformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/unichemformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/unichemformat.so CMakeFiles/unichemformat.dir/unichemformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 68%] Built target unichemformat /usr/bin/gmake -f src/formats/CMakeFiles/viewmolformat.dir/build.make src/formats/CMakeFiles/viewmolformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/viewmolformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/viewmolformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/viewmolformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/viewmolformat.dir/depend.internal". Scanning dependencies of target viewmolformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/viewmolformat.dir/build.make src/formats/CMakeFiles/viewmolformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 68%] Building CXX object src/formats/CMakeFiles/viewmolformat.dir/viewmolformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dviewmolformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/viewmolformat.dir/viewmolformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/viewmolformat.cpp [ 68%] Linking CXX shared module ../../lib64/viewmolformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/viewmolformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/viewmolformat.so CMakeFiles/viewmolformat.dir/viewmolformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread [ 69%] Linking CXX shared module ../../lib64/opendxformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/opendxformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/opendxformat.so CMakeFiles/opendxformat.dir/opendxformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 69%] Built target viewmolformat /usr/bin/gmake -f src/formats/CMakeFiles/wlnformat.dir/build.make src/formats/CMakeFiles/wlnformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats 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Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/wlnformat.dir/depend.internal". Scanning dependencies of target wlnformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/wlnformat.dir/build.make src/formats/CMakeFiles/wlnformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 70%] Building CXX object src/formats/CMakeFiles/wlnformat.dir/wlnformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dwlnformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/wlnformat.dir/wlnformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/wlnformat.cpp gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 70%] Built target opendxformat /usr/bin/gmake -f src/formats/CMakeFiles/xedformat.dir/build.make src/formats/CMakeFiles/xedformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/xedformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/xedformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/xedformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/xedformat.dir/depend.internal". Scanning dependencies of target xedformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/xedformat.dir/build.make src/formats/CMakeFiles/xedformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 70%] Building CXX object src/formats/CMakeFiles/xedformat.dir/xedformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dxedformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/xedformat.dir/xedformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/xedformat.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/wlnformat.cpp: In member function 'virtual bool OpenBabel::WLNFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/wlnformat.cpp:138:17: warning: unused variable 'title' [-Wunused-variable] 138 | const char* title = pConv->GetTitle(); | ^~~~~ [ 70%] Building CXX object src/formats/CMakeFiles/wlnformat.dir/wln-nextmove.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dwlnformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/wlnformat.dir/wln-nextmove.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/wln-nextmove.cpp [ 70%] Linking CXX shared module ../../lib64/xedformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/xedformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/xedformat.so CMakeFiles/xedformat.dir/xedformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 70%] Built target xedformat /usr/bin/gmake -f src/formats/CMakeFiles/yasaraformat.dir/build.make src/formats/CMakeFiles/yasaraformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/yasaraformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/yasaraformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/yasaraformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/yasaraformat.dir/depend.internal". Scanning dependencies of target yasaraformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/yasaraformat.dir/build.make src/formats/CMakeFiles/yasaraformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 70%] Building CXX object src/formats/CMakeFiles/yasaraformat.dir/yasaraformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dyasaraformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/yasaraformat.dir/yasaraformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/yasaraformat.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/yasaraformat.cpp: In member function 'virtual bool OpenBabel::YOBFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/yasaraformat.cpp:373:21: warning: variable 'reslen' set but not used [-Wunused-but-set-variable] 373 | int /*samenames,*/reslen,charged; | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/yasaraformat.cpp: In member function 'OpenBabel::YOBFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/yasaraformat.cpp:571:36: warning: '__snprintf_chk' output truncated before the last format character [-Wformat-truncation=] 571 | snprintf(&buffer[12], 4, "%4d",res->GetNum()); } | ^ In file included from /usr/include/stdio.h:866, from /usr/include/c++/10/cstdio:42, from /usr/include/c++/10/ext/string_conversions.h:43, from /usr/include/c++/10/bits/basic_string.h:6545, from /usr/include/c++/10/string:55, from /usr/include/c++/10/bits/locale_classes.h:40, from /usr/include/c++/10/bits/ios_base.h:41, from /usr/include/c++/10/ios:42, from /usr/include/c++/10/ostream:38, from /usr/include/c++/10/iostream:39, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/obconversion.h:24, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include/openbabel/obmolecformat.h:36, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/yasaraformat.cpp:34: /usr/include/bits/stdio2.h:70:35: note: '__snprintf_chk' output between 5 and 12 bytes into a destination of size 4 70 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/yasaraformat.cpp: In function 'OpenBabel::mob_getid(OpenBabel::atomid*, OpenBabel::mobatom*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/yasaraformat.cpp:244:26: warning: array subscript 4 is above array bounds of 'int32[4]' [-Warray-bounds] 244 | { inscodealtloc=int32le(atom->link[idpos++]); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/yasaraformat.cpp:192:9: note: while referencing 'link' 192 | int32 link[4]; }; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/yasaraformat.cpp:252:60: warning: array subscript 4 is above array bounds of 'int32[4]' [-Warray-bounds] 252 | if (flags&MOB_SEGMENTFLAG) id->segment=atom->link[idpos++]; | ~~~~~~~~~~~~~~~~~~^ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/yasaraformat.cpp:192:9: note: while referencing 'link' 192 | int32 link[4]; }; | ^~~~ [ 70%] Linking CXX shared module ../../lib64/yasaraformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/yasaraformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/yasaraformat.so CMakeFiles/yasaraformat.dir/yasaraformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 70%] Built target yasaraformat /usr/bin/gmake -f src/formats/CMakeFiles/dmolformat.dir/build.make src/formats/CMakeFiles/dmolformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/dmolformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/dmolformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/dmolformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/dmolformat.dir/depend.internal". Scanning dependencies of target dmolformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/dmolformat.dir/build.make src/formats/CMakeFiles/dmolformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 70%] Building CXX object src/formats/CMakeFiles/dmolformat.dir/dmolformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Ddmolformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include 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-Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread [ 70%] Linking CXX shared module ../../lib64/dmolformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/dmolformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/dmolformat.so CMakeFiles/dmolformat.dir/dmolformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 70%] Built target dmolformat /usr/bin/gmake -f src/formats/CMakeFiles/rsmiformat.dir/build.make src/formats/CMakeFiles/rsmiformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa 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Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/rsmiformat.dir/depend.internal". Scanning dependencies of target rsmiformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/rsmiformat.dir/build.make src/formats/CMakeFiles/rsmiformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 70%] Building CXX object src/formats/CMakeFiles/rsmiformat.dir/rsmiformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Drsmiformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/rsmiformat.dir/rsmiformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/rsmiformat.cpp gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 70%] Built target wlnformat /usr/bin/gmake -f src/formats/CMakeFiles/png2format.dir/build.make src/formats/CMakeFiles/png2format.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/png2format.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/png2format.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/png2format.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/png2format.dir/depend.internal". Scanning dependencies of target png2format gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/png2format.dir/build.make src/formats/CMakeFiles/png2format.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 70%] Building CXX object src/formats/CMakeFiles/png2format.dir/png2format.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpng2format_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include 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In member function 'virtual bool OpenBabel::PNG2Format::WriteChemObject(OpenBabel::OBConversion*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/png2format.cpp:105:42: warning: comparison of integer expressions of different signedness: 'std::vector::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare] 105 | bool nomore = _nmax && (_objects.size()==_nmax); | ~~~~~~~~~~~~~~~^~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/png2format.cpp:135:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 135 | pConv->SetLast(n==_objects.size()); | ~^~~~~~~~~~~~~~~~~ [ 71%] Linking CXX shared module ../../lib64/rsmiformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/rsmiformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/rsmiformat.so CMakeFiles/rsmiformat.dir/rsmiformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread [ 71%] Building CXX object src/formats/CMakeFiles/png2format.dir/__/depict/cairopainter.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpng2format_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/png2format.dir/__/depict/cairopainter.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/depict/cairopainter.cpp [ 71%] Linking CXX shared module ../../lib64/png2format.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/png2format.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/png2format.so CMakeFiles/png2format.dir/png2format.cpp.o CMakeFiles/png2format.dir/__/depict/cairopainter.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 71%] Built target rsmiformat /usr/bin/gmake -f src/formats/CMakeFiles/cdxmlformat.dir/build.make src/formats/CMakeFiles/cdxmlformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/cdxmlformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/cdxmlformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/cdxmlformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/cdxmlformat.dir/depend.internal". Scanning dependencies of target cdxmlformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/cdxmlformat.dir/build.make src/formats/CMakeFiles/cdxmlformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 71%] Building CXX object src/formats/CMakeFiles/cdxmlformat.dir/xml/cdxmlformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcdxmlformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/cdxmlformat.dir/xml/cdxmlformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/xml/cdxmlformat.cpp gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 71%] Built target png2format /usr/bin/gmake -f src/formats/CMakeFiles/cmlformat.dir/build.make src/formats/CMakeFiles/cmlformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/cmlformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/cmlformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/cmlformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/cmlformat.dir/depend.internal". Scanning dependencies of target cmlformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/cmlformat.dir/build.make src/formats/CMakeFiles/cmlformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 72%] Building CXX object src/formats/CMakeFiles/cmlformat.dir/xml/cmlformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcmlformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/cmlformat.dir/xml/cmlformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/xml/cmlformat.cpp [ 72%] Building CXX object src/formats/CMakeFiles/cdxmlformat.dir/xml/xml.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcdxmlformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/cdxmlformat.dir/xml/xml.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/xml/xml.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/xml/cmlformat.cpp: In member function 'bool OpenBabel::CMLFormat::DoHCounts()': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/xml/cmlformat.cpp:967:25: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 967 | if(it->second == atom->GetIdx()) | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/xml/cmlformat.cpp: In member function 'void OpenBabel::CMLFormat::WriteMetadataList(OpenBabel::OBMol&)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/xml/cmlformat.cpp:1269:26: warning: unused variable 'C_TITLE' [-Wunused-variable] 1269 | static const xmlChar C_TITLE[] = "title"; | ^~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/xml/cmlformat.cpp: In member function 'std::string OpenBabel::CMLFormat::getTimestr()': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/xml/cmlformat.cpp:1319:12: warning: variable 'time_res' set but not used [-Wunused-but-set-variable] 1319 | size_t time_res; /* Result of strftime */ | ^~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/xml/cmlformat.cpp: In member function 'virtual bool OpenBabel::CMLFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/xml/cmlformat.cpp:1366:26: warning: unused variable 'C_DESCRIPTION' [-Wunused-variable] 1366 | static const xmlChar C_DESCRIPTION[] = "description"; | ^~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/xml/cmlformat.cpp: In member function 'bool OpenBabel::CMLFormat::WriteVibrationData(OpenBabel::OBMol&)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/xml/cmlformat.cpp:2308:26: warning: unused variable 'C_SCALAR' [-Wunused-variable] 2308 | static const xmlChar C_SCALAR[] = "scalar"; | ^~~~~~~~ [ 73%] Linking CXX shared module ../../lib64/cdxmlformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cdxmlformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/cdxmlformat.so CMakeFiles/cdxmlformat.dir/xml/cdxmlformat.cpp.o CMakeFiles/cdxmlformat.dir/xml/xml.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm -lxml2 ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 73%] Built target cdxmlformat /usr/bin/gmake -f src/formats/CMakeFiles/cmlreactformat.dir/build.make src/formats/CMakeFiles/cmlreactformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/cmlreactformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/cmlreactformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/cmlreactformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/cmlreactformat.dir/depend.internal". Scanning dependencies of target cmlreactformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/cmlreactformat.dir/build.make src/formats/CMakeFiles/cmlreactformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 73%] Building CXX object src/formats/CMakeFiles/cmlreactformat.dir/xml/cmlreactformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcmlreactformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/cmlreactformat.dir/xml/cmlreactformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/xml/cmlreactformat.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/xml/cmlreactformat.cpp: In member function 'virtual bool OpenBabel::CMLReactFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/xml/cmlreactformat.cpp:520:12: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] 520 | for(i=0;iNumReactants();i++) | ~^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/xml/cmlreactformat.cpp:542:12: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] 542 | for(i=0;iNumProducts();i++) | ~^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/xml/cmlreactformat.cpp: In member function 'bool OpenBabel::CMLReactFormat::WriteRateData(OpenBabel::OBReaction*, xmlChar*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/xml/cmlreactformat.cpp:706:9: warning: enumeration value 'ARRHENIUS' not handled in switch [-Wswitch] 706 | switch(pRD->ReactionType) | ^ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/xml/cmlreactformat.cpp:734:9: warning: enumeration value 'ARRHENIUS' not handled in switch [-Wswitch] 734 | switch(pRD->ReactionType) | ^ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/xml/cmlreactformat.cpp:734:9: warning: enumeration value 'SRI' not handled in switch [-Wswitch] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/xml/cmlreactformat.cpp: In member function 'void OpenBabel::CMLReactFormat::WriteMetadataList(OpenBabel::OBReaction&)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/xml/cmlreactformat.cpp:773:26: warning: unused variable 'C_TITLE' [-Wunused-variable] 773 | static const xmlChar C_TITLE[] = "title"; | ^~~~~~~ [ 73%] Building CXX object src/formats/CMakeFiles/cmlformat.dir/xml/xml.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcmlformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/cmlformat.dir/xml/xml.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/xml/xml.cpp [ 73%] Building CXX object src/formats/CMakeFiles/cmlreactformat.dir/xml/xml.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcmlreactformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/cmlreactformat.dir/xml/xml.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/xml/xml.cpp [ 73%] Linking CXX shared module ../../lib64/cmlformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmlformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/cmlformat.so CMakeFiles/cmlformat.dir/xml/cmlformat.cpp.o CMakeFiles/cmlformat.dir/xml/xml.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm -lxml2 ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread [ 74%] Linking CXX shared module ../../lib64/cmlreactformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmlreactformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/cmlreactformat.so CMakeFiles/cmlreactformat.dir/xml/cmlreactformat.cpp.o CMakeFiles/cmlreactformat.dir/xml/xml.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm -lxml2 ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 74%] Built target cmlreactformat /usr/bin/gmake -f src/formats/CMakeFiles/chemdrawcdx.dir/build.make src/formats/CMakeFiles/chemdrawcdx.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/chemdrawcdx.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/chemdrawcdx.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/chemdrawcdx.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/chemdrawcdx.dir/depend.internal". Scanning dependencies of target chemdrawcdx gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/chemdrawcdx.dir/build.make src/formats/CMakeFiles/chemdrawcdx.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 75%] Building CXX object src/formats/CMakeFiles/chemdrawcdx.dir/chemdrawcdx.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dchemdrawcdx_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/chemdrawcdx.dir/chemdrawcdx.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/chemdrawcdx.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/chemdrawcdx.cpp: In member function 'bool OpenBabel::ChemDrawBinaryXFormat::DoReaction(OpenBabel::CDXReader&, OpenBabel::OBMol*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/chemdrawcdx.cpp:338:25: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] 338 | for(unsigned i=0;iNumAtoms();++idx) | ~~~^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/chemdrawcdx.cpp: In member function 'bool OpenBabel::ChemDrawBinaryXFormat::DoFragmentImpl(OpenBabel::CDXReader&, OpenBabel::OBMol*, std::map&, std::map&)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/chemdrawcdx.cpp:477:27: warning: variable 'hasElement' set but not used [-Wunused-but-set-variable] 477 | bool isAlias=false, hasElement=false; | ^~~~~~~~~~ gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 75%] Built target cmlformat /usr/bin/gmake -f src/formats/CMakeFiles/pubchemjsonformat.dir/build.make src/formats/CMakeFiles/pubchemjsonformat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/pubchemjsonformat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/pubchemjsonformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/pubchemjsonformat.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats/CMakeFiles/pubchemjsonformat.dir/depend.internal". Scanning dependencies of target pubchemjsonformat gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/formats/CMakeFiles/pubchemjsonformat.dir/build.make src/formats/CMakeFiles/pubchemjsonformat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 75%] Building CXX object src/formats/CMakeFiles/pubchemjsonformat.dir/json/pubchemjsonformat.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpubchemjsonformat_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/pubchemjsonformat.dir/json/pubchemjsonformat.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/json/pubchemjsonformat.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/json/pubchemjsonformat.cpp: In member function 'virtual bool OpenBabel::PubChemJSONFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/json/pubchemjsonformat.cpp:121:41: warning: comparison of integer expressions of different signedness: 'rapidjson::SizeType' {aka 'unsigned int'} and 'int' [-Wsign-compare] 121 | if (inRoot["PC_Compounds"].Size() > currentMolIndex) { | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/json/pubchemjsonformat.cpp:131:42: warning: comparison of integer expressions of different signedness: 'rapidjson::SizeType' {aka 'unsigned int'} and 'int' [-Wsign-compare] 131 | if (inRoot["PC_Substances"].Size() > currentMolIndex) { | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/chemdrawcdx.cpp:621:28: warning: 'endIdx' may be used uninitialized in this function [-Wmaybe-uninitialized] 621 | if(!order || !bgnIdx || !endIdx) | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/formats/chemdrawcdx.cpp:621:17: warning: 'bgnIdx' may be used uninitialized in this function [-Wmaybe-uninitialized] 621 | if(!order || !bgnIdx || !endIdx) | ~~~~~~~^~~~~~~~~~ [ 75%] Linking CXX shared module ../../lib64/chemdrawcdx.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/chemdrawcdx.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/chemdrawcdx.so CMakeFiles/chemdrawcdx.dir/chemdrawcdx.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 75%] Built target chemdrawcdx /usr/bin/gmake -f tools/CMakeFiles/obrms.dir/build.make tools/CMakeFiles/obrms.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obrms.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obrms.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obrms.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obrms.dir/depend.internal". Scanning dependencies of target obrms gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f tools/CMakeFiles/obrms.dir/build.make tools/CMakeFiles/obrms.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 75%] Building CXX object tools/CMakeFiles/obrms.dir/obrms.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIE -pthread -std=gnu++11 -o CMakeFiles/obrms.dir/obrms.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools/obrms.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools/obrms.cpp: In function 'int main(int, char**)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools/obrms.cpp:219:7: warning: unused variable 'help' [-Wunused-variable] 219 | bool help = false; | ^~~~ [ 75%] Linking CXX executable ../bin/obrms cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obrms.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/obrms.dir/obrms.cpp.o -o ../bin/obrms -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: ../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 75%] Built target obrms /usr/bin/gmake -f tools/CMakeFiles/obspectrophore.dir/build.make tools/CMakeFiles/obspectrophore.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obspectrophore.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obspectrophore.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obspectrophore.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obspectrophore.dir/depend.internal". Scanning dependencies of target obspectrophore gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f tools/CMakeFiles/obspectrophore.dir/build.make tools/CMakeFiles/obspectrophore.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 75%] Building CXX object tools/CMakeFiles/obspectrophore.dir/obspectrophore.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIE -pthread -std=gnu++11 -o CMakeFiles/obspectrophore.dir/obspectrophore.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools/obspectrophore.cpp [ 75%] Linking CXX shared module ../../lib64/pubchemjsonformat.so cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pubchemjsonformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/pubchemjsonformat.so CMakeFiles/pubchemjsonformat.dir/json/pubchemjsonformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread [ 75%] Linking CXX executable ../bin/obspectrophore cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obspectrophore.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/obspectrophore.dir/obspectrophore.cpp.o -o ../bin/obspectrophore -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: ../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 75%] Built target obspectrophore /usr/bin/gmake -f tools/CMakeFiles/obgrep.dir/build.make tools/CMakeFiles/obgrep.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obgrep.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obgrep.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obgrep.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obgrep.dir/depend.internal". Scanning dependencies of target obgrep gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f tools/CMakeFiles/obgrep.dir/build.make tools/CMakeFiles/obgrep.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 75%] Building CXX object tools/CMakeFiles/obgrep.dir/obgrep.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIE -pthread -std=gnu++11 -o CMakeFiles/obgrep.dir/obgrep.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools/obgrep.cpp [ 75%] Linking CXX executable ../bin/obgrep cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obgrep.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/obgrep.dir/obgrep.cpp.o -o ../bin/obgrep -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: ../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 75%] Built target obgrep /usr/bin/gmake -f tools/CMakeFiles/obthermo.dir/build.make tools/CMakeFiles/obthermo.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obthermo.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obthermo.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obthermo.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obthermo.dir/depend.internal". Scanning dependencies of target obthermo gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f tools/CMakeFiles/obthermo.dir/build.make tools/CMakeFiles/obthermo.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 75%] Building CXX object tools/CMakeFiles/obthermo.dir/obthermo.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIE -pthread -std=gnu++11 -o CMakeFiles/obthermo.dir/obthermo.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools/obthermo.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools/obthermo.cpp: In function 'int main(int, char**)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools/obthermo.cpp:154:18: warning: unused variable 'Rgas' [-Wunused-variable] 154 | double Rgas = 1.9872041; // cal/mol K | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools/obthermo.cpp:41:10: warning: variable 'bKJ' set but not used [-Wunused-but-set-variable] 41 | bool bKJ = false; | ^~~ gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 75%] Built target pubchemjsonformat /usr/bin/gmake -f tools/CMakeFiles/obtautomer.dir/build.make tools/CMakeFiles/obtautomer.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obtautomer.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obtautomer.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obtautomer.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obtautomer.dir/depend.internal". Scanning dependencies of target obtautomer gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f tools/CMakeFiles/obtautomer.dir/build.make tools/CMakeFiles/obtautomer.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 75%] Building CXX object tools/CMakeFiles/obtautomer.dir/obtautomer.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIE -pthread -std=gnu++11 -o CMakeFiles/obtautomer.dir/obtautomer.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools/obtautomer.cpp [ 76%] Linking CXX executable ../bin/obthermo cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obthermo.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/obthermo.dir/obthermo.cpp.o -o ../bin/obthermo -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: ../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 76%] Built target obthermo /usr/bin/gmake -f tools/CMakeFiles/obabel.dir/build.make tools/CMakeFiles/obabel.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obabel.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obabel.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obabel.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obabel.dir/depend.internal". Scanning dependencies of target obabel gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f tools/CMakeFiles/obabel.dir/build.make tools/CMakeFiles/obabel.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 76%] Building CXX object tools/CMakeFiles/obabel.dir/obabel.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIE -pthread -std=gnu++11 -o CMakeFiles/obabel.dir/obabel.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools/obabel.cpp [ 76%] Linking CXX executable ../bin/obtautomer cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obtautomer.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/obtautomer.dir/obtautomer.cpp.o -o ../bin/obtautomer -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: ../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 76%] Built target obtautomer /usr/bin/gmake -f tools/CMakeFiles/obminimize.dir/build.make tools/CMakeFiles/obminimize.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obminimize.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obminimize.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obminimize.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obminimize.dir/depend.internal". Scanning dependencies of target obminimize gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f tools/CMakeFiles/obminimize.dir/build.make tools/CMakeFiles/obminimize.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 76%] Building CXX object tools/CMakeFiles/obminimize.dir/obminimize.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIE -pthread -std=gnu++11 -o CMakeFiles/obminimize.dir/obminimize.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools/obminimize.cpp [ 77%] Linking CXX executable ../bin/obabel cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obabel.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/obabel.dir/obabel.cpp.o -o ../bin/obabel -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: ../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread [ 78%] Linking CXX executable ../bin/obminimize cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools && 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'/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 78%] Built target obabel /usr/bin/gmake -f tools/CMakeFiles/obdistgen.dir/build.make tools/CMakeFiles/obdistgen.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obdistgen.dir/DependInfo.cmake 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Scanning dependencies of target obdistgen gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f tools/CMakeFiles/obdistgen.dir/build.make tools/CMakeFiles/obdistgen.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 78%] Building CXX object tools/CMakeFiles/obdistgen.dir/obdistgen.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIE -pthread -std=gnu++11 -o CMakeFiles/obdistgen.dir/obdistgen.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools/obdistgen.cpp gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 78%] Built target obminimize /usr/bin/gmake -f tools/CMakeFiles/obrotate.dir/build.make tools/CMakeFiles/obrotate.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obrotate.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obrotate.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obrotate.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obrotate.dir/depend.internal". Scanning dependencies of target obrotate gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f tools/CMakeFiles/obrotate.dir/build.make tools/CMakeFiles/obrotate.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 78%] Building CXX object tools/CMakeFiles/obrotate.dir/obrotate.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIE -pthread -std=gnu++11 -o CMakeFiles/obrotate.dir/obrotate.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools/obrotate.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools/obdistgen.cpp: In function 'int main(int, char**)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools/obdistgen.cpp:108:34: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] 108 | for (unsigned int n = 0; n < mol.NumConformers();++n) | ~~^~~~~~~~~~~~~~~~~~~~~ [ 78%] Linking CXX executable ../bin/obdistgen cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obdistgen.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/obdistgen.dir/obdistgen.cpp.o -o ../bin/obdistgen -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: ../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools/obrotate.cpp: In function 'main': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools/obrotate.cpp:181:23: warning: 'a4' may be used uninitialized in this function [-Wmaybe-uninitialized] 181 | mol.SetTorsion(a1, a2, a3, a4, angle * DEG_TO_RAD); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools/obrotate.cpp:175:28: warning: 'a3' may be used uninitialized in this function [-Wmaybe-uninitialized] 175 | if ( !a2->IsConnected(a3) ) { | ~~~~~~~~~~~~~~~^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools/obrotate.cpp:175:28: warning: 'a2' may be used uninitialized in this function [-Wmaybe-uninitialized] /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools/obrotate.cpp:181:23: warning: 'a1' may be used uninitialized in this function [-Wmaybe-uninitialized] 181 | mol.SetTorsion(a1, a2, a3, a4, angle * DEG_TO_RAD); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 78%] Built target obdistgen /usr/bin/gmake -f tools/CMakeFiles/obenergy.dir/build.make tools/CMakeFiles/obenergy.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obenergy.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obenergy.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obenergy.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obenergy.dir/depend.internal". Scanning dependencies of target obenergy gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f tools/CMakeFiles/obenergy.dir/build.make tools/CMakeFiles/obenergy.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 79%] Building CXX object tools/CMakeFiles/obenergy.dir/obenergy.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIE -pthread -std=gnu++11 -o CMakeFiles/obenergy.dir/obenergy.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools/obenergy.cpp [ 79%] Linking CXX executable ../bin/obrotate cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obrotate.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/obrotate.dir/obrotate.cpp.o -o ../bin/obrotate -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: ../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 79%] Built target obrotate /usr/bin/gmake -f tools/CMakeFiles/obfit.dir/build.make tools/CMakeFiles/obfit.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obfit.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obfit.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obfit.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obfit.dir/depend.internal". Scanning dependencies of target obfit gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f tools/CMakeFiles/obfit.dir/build.make tools/CMakeFiles/obfit.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 79%] Building CXX object tools/CMakeFiles/obfit.dir/obfit.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIE -pthread -std=gnu++11 -o CMakeFiles/obfit.dir/obfit.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools/obfit.cpp [ 79%] Linking CXX executable ../bin/obenergy cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obenergy.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/obenergy.dir/obenergy.cpp.o -o ../bin/obenergy -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: ../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 79%] Built target obenergy /usr/bin/gmake -f tools/CMakeFiles/obprobe.dir/build.make tools/CMakeFiles/obprobe.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obprobe.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obprobe.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obprobe.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obprobe.dir/depend.internal". Scanning dependencies of target obprobe gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f tools/CMakeFiles/obprobe.dir/build.make tools/CMakeFiles/obprobe.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 79%] Building CXX object tools/CMakeFiles/obprobe.dir/obprobe.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIE -pthread -std=gnu++11 -o CMakeFiles/obprobe.dir/obprobe.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools/obprobe.cpp [ 79%] Linking CXX executable ../bin/obfit cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obfit.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/obfit.dir/obfit.cpp.o -o ../bin/obfit -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: ../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 79%] Built target obfit /usr/bin/gmake -f tools/CMakeFiles/obmm.dir/build.make tools/CMakeFiles/obmm.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obmm.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obmm.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obmm.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obmm.dir/depend.internal". Scanning dependencies of target obmm gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f tools/CMakeFiles/obmm.dir/build.make tools/CMakeFiles/obmm.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 79%] Building CXX object tools/CMakeFiles/obmm.dir/obmm.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIE -pthread -std=gnu++11 -o CMakeFiles/obmm.dir/obmm.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools/obmm.cpp [ 79%] Linking CXX executable ../bin/obprobe cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obprobe.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/obprobe.dir/obprobe.cpp.o -o ../bin/obprobe -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: ../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 79%] Built target obprobe /usr/bin/gmake -f tools/CMakeFiles/obgen.dir/build.make tools/CMakeFiles/obgen.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obgen.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obgen.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obgen.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obgen.dir/depend.internal". Scanning dependencies of target obgen gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f tools/CMakeFiles/obgen.dir/build.make tools/CMakeFiles/obgen.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 79%] Building CXX object tools/CMakeFiles/obgen.dir/obgen.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIE -pthread -std=gnu++11 -o CMakeFiles/obgen.dir/obgen.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools/obgen.cpp [ 79%] Linking CXX executable ../bin/obmm cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obmm.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/obmm.dir/obmm.cpp.o -o ../bin/obmm -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: ../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread [ 79%] Linking CXX executable ../bin/obgen cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obgen.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/obgen.dir/obgen.cpp.o -o ../bin/obgen -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: ../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 79%] Built target obmm /usr/bin/gmake -f tools/CMakeFiles/obprop.dir/build.make tools/CMakeFiles/obprop.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obprop.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obprop.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obprop.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obprop.dir/depend.internal". Scanning dependencies of target obprop gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f tools/CMakeFiles/obprop.dir/build.make tools/CMakeFiles/obprop.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 80%] Building CXX object tools/CMakeFiles/obprop.dir/obprop.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIE -pthread -std=gnu++11 -o CMakeFiles/obprop.dir/obprop.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools/obprop.cpp gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 80%] Built target obgen /usr/bin/gmake -f tools/CMakeFiles/obfitall.dir/build.make tools/CMakeFiles/obfitall.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obfitall.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obfitall.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obfitall.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obfitall.dir/depend.internal". Scanning dependencies of target obfitall gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f tools/CMakeFiles/obfitall.dir/build.make tools/CMakeFiles/obfitall.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 80%] Building CXX object tools/CMakeFiles/obfitall.dir/obfitall.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIE -pthread -std=gnu++11 -o CMakeFiles/obfitall.dir/obfitall.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools/obfitall.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools/obfitall.cpp: In function 'int main(int, char**)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools/obfitall.cpp:219:18: warning: unused variable 'best_rmsd' [-Wunused-variable] 219 | double best_rmsd = 999.999; | ^~~~~~~~~ [ 80%] Linking CXX executable ../bin/obprop cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obprop.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/obprop.dir/obprop.cpp.o -o ../bin/obprop -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: ../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 80%] Built target obprop /usr/bin/gmake -f tools/CMakeFiles/obrotamer.dir/build.make tools/CMakeFiles/obrotamer.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obrotamer.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obrotamer.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obrotamer.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obrotamer.dir/depend.internal". Scanning dependencies of target obrotamer gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f tools/CMakeFiles/obrotamer.dir/build.make tools/CMakeFiles/obrotamer.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 80%] Building CXX object tools/CMakeFiles/obrotamer.dir/obrotamer.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIE -pthread -std=gnu++11 -o CMakeFiles/obrotamer.dir/obrotamer.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools/obrotamer.cpp [ 81%] Linking CXX executable ../bin/obfitall cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obfitall.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/obfitall.dir/obfitall.cpp.o -o ../bin/obfitall -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: ../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 81%] Built target obfitall /usr/bin/gmake -f tools/CMakeFiles/obconformer.dir/build.make tools/CMakeFiles/obconformer.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obconformer.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obconformer.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obconformer.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obconformer.dir/depend.internal". Scanning dependencies of target obconformer gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f tools/CMakeFiles/obconformer.dir/build.make tools/CMakeFiles/obconformer.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 81%] Building CXX object tools/CMakeFiles/obconformer.dir/obconformer.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIE -pthread -std=gnu++11 -o CMakeFiles/obconformer.dir/obconformer.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools/obconformer.cpp In file included from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools/obrotamer.cpp:32: /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools/../src/rand.cpp:428:15: warning: 'void OpenBabel::GenerateSequence(unsigned int, unsigned int, unsigned int, unsigned int)' defined but not used [-Wunused-function] 428 | static void GenerateSequence( unsigned int p, unsigned int m, | ^~~~~~~~~~~~~~~~ [ 82%] Linking CXX executable ../bin/obrotamer cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obrotamer.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/obrotamer.dir/obrotamer.cpp.o -o ../bin/obrotamer -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: ../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread [ 82%] Linking CXX executable ../bin/obconformer cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obconformer.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/obconformer.dir/obconformer.cpp.o -o ../bin/obconformer -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: ../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 82%] Built target obrotamer /usr/bin/gmake -f tools/CMakeFiles/obsym.dir/build.make tools/CMakeFiles/obsym.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" 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Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools/CMakeFiles/obsym.dir/depend.internal". Scanning dependencies of target obsym gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f tools/CMakeFiles/obsym.dir/build.make tools/CMakeFiles/obsym.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 83%] Building CXX object tools/CMakeFiles/obsym.dir/obsym.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIE -pthread -std=gnu++11 -o CMakeFiles/obsym.dir/obsym.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/tools/obsym.cpp gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 83%] Built target obconformer /usr/bin/gmake -f src/GUI/CMakeFiles/obgui.dir/build.make src/GUI/CMakeFiles/obgui.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/GUI /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/GUI /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/GUI/CMakeFiles/obgui.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/GUI/CMakeFiles/obgui.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/GUI/CMakeFiles/obgui.dir/depend.internal". 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Scanning dependencies of target obgui gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f src/GUI/CMakeFiles/obgui.dir/build.make src/GUI/CMakeFiles/obgui.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 84%] Building CXX object src/GUI/CMakeFiles/obgui.dir/OBGUI.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/GUI && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/GUI/. -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIE -pthread -std=gnu++11 -o CMakeFiles/obgui.dir/OBGUI.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/GUI/OBGUI.cpp [ 84%] Linking CXX executable ../bin/obsym cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obsym.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/obsym.dir/obsym.cpp.o -o ../bin/obsym -Wl,-rpath,/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64: ../lib64/libopenbabel.so.7.0.0 -lm -ldl -lz -pthread gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 84%] Built target obsym /usr/bin/gmake -f test/CMakeFiles/roundtrip.dir/build.make test/CMakeFiles/roundtrip.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/test /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/test /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/test/CMakeFiles/roundtrip.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/test/CMakeFiles/roundtrip.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/test/CMakeFiles/roundtrip.dir/depend.internal". 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-I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/test -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIE -pthread -std=gnu++11 -o CMakeFiles/test_inchiwrite.dir/inchiwrite.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/test/inchiwrite.cpp In file included from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/GUI/OBGUI.cpp:26: /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/GUI/./selformats.h: In member function 'bool ActiveFormats::Add(wxString&)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/GUI/./selformats.h:82:52: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare] 82 | return (ActiveFormatsString.find(format+_T(';')) != -1); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/GUI/OBGUI.cpp: In member function 'virtual bool OBGUIApp::OnInit()': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/GUI/OBGUI.cpp:129:21: warning: unused variable 'splash' [-Wunused-variable] 129 | wxSplashScreen* splash = new wxSplashScreen(bitmap, | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/GUI/OBGUI.cpp: In member function 'void OBGUIFrame::DisplayInputFiles(wxArrayString)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/GUI/OBGUI.cpp:766:12: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare] 766 | for(i=0;iGetCount();iSel++) | ~~~~^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/GUI/OBGUI.cpp: In member function 'wxString OBGUIFrame::ShortenedPath(const wxString&, const wxWindow&, int)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/GUI/OBGUI.cpp:934:10: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare] 934 | if(pos1==wxNOT_FOUND || pos1+1 == path.length()) return path; | ^ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/GUI/OBGUI.cpp:936:10: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare] 936 | if(pos1==wxNOT_FOUND || pos1+1 == path.length()) return path; | ^ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/GUI/OBGUI.cpp:943:12: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare] 943 | if(pos2==wxNOT_FOUND || pos2+1 == tpath.length()) return path; | ^ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/GUI/OBGUI.cpp:946:46: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare] 946 | if(tpath.find_first_of(_T("/\\"), pos2+1)==wxNOT_FOUND) return path; | ^ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/GUI/OBGUI.cpp: In member function 'void OBGUIFrame::GetAvailableFormats()': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/GUI/OBGUI.cpp:1000:13: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long unsigned int'} [-Wsign-compare] 1000 | if(pos!=wxString::npos) | ~~~^~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/GUI/OBGUI.cpp:1005:11: warning: variable 'n' set but not used [-Wunused-but-set-variable] 1005 | int n; | ^ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/GUI/OBGUI.cpp: In member function 'void OBGUIFrame::MakePluginsMenu()': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/GUI/OBGUI.cpp:1101:24: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 1101 | for(int itop=0; itop < topvec.size(); ++itop) | ~~~~~^~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/GUI/OBGUI.cpp:1109:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 1109 | for(int isub=0; isub < subvec.size(); ++isub) | ~~~~~^~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/GUI/OBGUI.cpp: In member function 'void CFilenames::OnKeyPress(wxKeyEvent&)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/GUI/OBGUI.cpp:1187:50: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare] 1187 | if(nameWithWildcard.find_first_of(_T("*?"))==wxNOT_FOUND) | ^ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/GUI/OBGUI.cpp:1203:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 1203 | for(i=0;i > >::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare] 15 | return (G.size() == numAutomorphisms); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~ [ 86%] Building CXX object test/CMakeFiles/test_runner.dir/buildertest.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/test && /usr/bin/g++ -DFORMATDIR=\"/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/test -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIE -pthread -std=gnu++11 -o CMakeFiles/test_runner.dir/buildertest.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/test/buildertest.cpp In file included from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/GUI/./stdwx.h:50, from /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/GUI/stdwx.cpp:1: /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/GUI/./babel.xpm:2:20: warning: 'sample_xpm' defined but not used [-Wunused-variable] 2 | static const char *sample_xpm[] = { | ^~~~~~~~~~ [ 86%] Building CXX object src/GUI/CMakeFiles/obgui.dir/optswx.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/src/GUI && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/GUI/. -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIE -pthread -std=gnu++11 -o CMakeFiles/obgui.dir/optswx.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/GUI/optswx.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/test/buildertest.cpp:15:21: warning: 'failed' defined but not used [-Wunused-variable] 15 | static unsigned int failed = 0; | ^~~~~~ [ 86%] Building CXX object test/CMakeFiles/test_runner.dir/canonconsistenttest.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/test && /usr/bin/g++ -DFORMATDIR=\"/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/test -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIE -pthread -std=gnu++11 -o CMakeFiles/test_runner.dir/canonconsistenttest.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/test/canonconsistenttest.cpp [ 86%] Building CXX object test/CMakeFiles/test_runner.dir/canonfragmenttest.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/test && /usr/bin/g++ -DFORMATDIR=\"/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/test -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIE -pthread -std=gnu++11 -o CMakeFiles/test_runner.dir/canonfragmenttest.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/test/canonfragmenttest.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/GUI/optswx.cpp: In member function 'bool DynOptionswx::Construct(const char*, const char*, int)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/GUI/optswx.cpp:223:16: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 223 | if(pdef=strcasestr(pCaption,"default")) | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/src/GUI/optswx.cpp:226:17: warning: unused variable 'tok' [-Wunused-variable] 226 | char* tok=strtok(pdef," :-\t(0) : report_error(#exp, __FILE__, __LINE__, FUNCTION_SIGNATURE, false) ) | ^~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/test/graphsymtest.cpp:111:9: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] 111 | if (n != numberOfClasses) { | ~~^~~~~~~~~~~~~~~~~~ [ 88%] Building CXX object test/CMakeFiles/test_runner.dir/gziptest.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/test && /usr/bin/g++ -DFORMATDIR=\"/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/test -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIE -pthread -std=gnu++11 -o CMakeFiles/test_runner.dir/gziptest.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/test/gziptest.cpp [ 88%] Building CXX object test/CMakeFiles/test_runner.dir/addhtest.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/test && /usr/bin/g++ -DFORMATDIR=\"/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/test -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIE -pthread -std=gnu++11 -o CMakeFiles/test_runner.dir/addhtest.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/test/addhtest.cpp cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/scripts && sed -e 's/rb_define_module("Openbabel")/rb_define_module("OpenBabel")/' -e's/void Init_OpenBabel/void Init_openbabel/' /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/scripts && /usr/bin/cmake -E remove /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.txt cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/scripts /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/scripts/CMakeFiles/bindings_ruby.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/scripts/CMakeFiles/bindings_ruby.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/scripts/CMakeFiles/bindings_ruby.dir/depend.internal". Dependee "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/scripts/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/scripts/CMakeFiles/bindings_ruby.dir/depend.internal". Scanning dependencies of target bindings_ruby gmake[2]: Leaving directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' /usr/bin/gmake -f scripts/CMakeFiles/bindings_ruby.dir/build.make scripts/CMakeFiles/bindings_ruby.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu' [ 88%] Building CXX object scripts/CMakeFiles/bindings_ruby.dir/ruby/openbabel-ruby.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/scripts && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dbindings_ruby_EXPORTS -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/usr/include/python3.9 -I/usr/lib64/perl5/CORE -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIC -pthread -std=gnu++11 -o CMakeFiles/bindings_ruby.dir/ruby/openbabel-ruby.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp [ 88%] Building CXX object test/CMakeFiles/test_runner.dir/implicitHtest.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/test && /usr/bin/g++ -DFORMATDIR=\"/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/test -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIE -pthread -std=gnu++11 -o CMakeFiles/test_runner.dir/implicitHtest.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/test/implicitHtest.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_ConstIterator_next(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:8595:97: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 8595 | SWIGINTERN VALUE _wrap_ConstIterator_next(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_ConstIterator_previous(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:8622:101: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 8622 | SWIGINTERN VALUE _wrap_ConstIterator_previous(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_Iterator_next(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:8760:92: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 8760 | SWIGINTERN VALUE _wrap_Iterator_next(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; argc = nargs + 1; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_Iterator_previous(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:8784:96: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 8784 | SWIGINTERN VALUE _wrap_Iterator_previous(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_VectorInt___getitem__(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:9104:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 9104 | if (!_v) goto check_1; return _wrap_VectorInt___getitem____SWIG_1(nargs, args, self);} check_1: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:9104:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 9104 | if (!_v) goto check_1; return _wrap_VectorInt___getitem____SWIG_1(nargs, args, self);} check_1: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_VectorInt___setitem____SWIG_1(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:9158:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 9158 | if (SWIG_IsNewObj(res4)) delete arg4; return vresult; fail: if (SWIG_IsNewObj(res4)) delete arg4; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:9158:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 9158 | if (SWIG_IsNewObj(res4)) delete arg4; return vresult; fail: if (SWIG_IsNewObj(res4)) delete arg4; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_VectorInt___setitem__(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:9159:100: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 9159 | SWIGINTERN VALUE _wrap_VectorInt___setitem__(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_VectorUnsignedInt___getitem__(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:9587:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 9587 | if (!_v) goto check_1; return _wrap_VectorUnsignedInt___getitem____SWIG_1(nargs, args, self);} check_1: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:9587:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 9587 | if (!_v) goto check_1; return _wrap_VectorUnsignedInt___getitem____SWIG_1(nargs, args, self);} check_1: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_VectorUnsignedInt___setitem____SWIG_1(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:9644:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 9644 | if (SWIG_IsNewObj(res4)) delete arg4; return vresult; fail: if (SWIG_IsNewObj(res4)) delete arg4; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:9644:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 9644 | if (SWIG_IsNewObj(res4)) delete arg4; return vresult; fail: if (SWIG_IsNewObj(res4)) delete arg4; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_VectorUnsignedInt___setitem__(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:9645:108: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 9645 | SWIGINTERN VALUE _wrap_VectorUnsignedInt___setitem__(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_VectorVInt___getitem__(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:10106:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 10106 | if (!_v) goto check_1; return _wrap_VectorVInt___getitem____SWIG_1(nargs, args, self);} check_1: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:10106:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 10106 | if (!_v) goto check_1; return _wrap_VectorVInt___getitem____SWIG_1(nargs, args, self);} check_1: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_VectorVInt___setitem____SWIG_1(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:10170:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 10170 | if (SWIG_IsNewObj(res4)) delete arg4; return vresult; fail: if (SWIG_IsNewObj(res4)) delete arg4; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:10170:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 10170 | if (SWIG_IsNewObj(res4)) delete arg4; return vresult; fail: if (SWIG_IsNewObj(res4)) delete arg4; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_VectorVInt___setitem__(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:10171:101: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 10171 | SWIGINTERN VALUE _wrap_VectorVInt___setitem__(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_VectorDouble___getitem__(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:10597:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 10597 | if (!_v) goto check_1; return _wrap_VectorDouble___getitem____SWIG_1(nargs, args, self);} check_1: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:10597:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 10597 | if (!_v) goto check_1; return _wrap_VectorDouble___getitem____SWIG_1(nargs, args, self);} check_1: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_VectorDouble___setitem____SWIG_1(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:10654:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 10654 | if (SWIG_IsNewObj(res4)) delete arg4; return vresult; fail: if (SWIG_IsNewObj(res4)) delete arg4; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:10654:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 10654 | if (SWIG_IsNewObj(res4)) delete arg4; return vresult; fail: if (SWIG_IsNewObj(res4)) delete arg4; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_VectorDouble___setitem__(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:10655:103: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 10655 | SWIGINTERN VALUE _wrap_VectorDouble___setitem__(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_VectorString___delete_2__(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:10981:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 10981 | if (SWIG_IsNewObj(res2)) delete arg2; return vresult; fail: if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:10981:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 10981 | if (SWIG_IsNewObj(res2)) delete arg2; return vresult; fail: if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_VectorString___getitem__(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:11097:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 11097 | if (!_v) goto check_1; return _wrap_VectorString___getitem____SWIG_1(nargs, args, self);} check_1: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:11097:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 11097 | if (!_v) goto check_1; return _wrap_VectorString___getitem____SWIG_1(nargs, args, self);} check_1: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_VectorString___setitem____SWIG_1(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:11157:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 11157 | if (SWIG_IsNewObj(res4)) delete arg4; return vresult; fail: if (SWIG_IsNewObj(res4)) delete arg4; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:11157:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 11157 | if (SWIG_IsNewObj(res4)) delete arg4; return vresult; fail: if (SWIG_IsNewObj(res4)) delete arg4; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_VectorString___setitem__(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:11158:103: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 11158 | SWIGINTERN VALUE _wrap_VectorString___setitem__(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_VectorString___delete__(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:11356:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 11356 | if (SWIG_IsNewObj(res2)) delete arg2; return vresult; fail: if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:11356:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 11356 | if (SWIG_IsNewObj(res2)) delete arg2; return vresult; fail: if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_VectorVector3___getitem__(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:11616:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 11616 | if (!_v) goto check_1; return _wrap_VectorVector3___getitem____SWIG_1(nargs, args, self);} check_1: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:11616:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 11616 | if (!_v) goto check_1; return _wrap_VectorVector3___getitem____SWIG_1(nargs, args, self);} check_1: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_VectorVector3___setitem____SWIG_1(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:11678:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 11678 | if (SWIG_IsNewObj(res4)) delete arg4; return vresult; fail: if (SWIG_IsNewObj(res4)) delete arg4; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:11678:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 11678 | if (SWIG_IsNewObj(res4)) delete arg4; return vresult; fail: if (SWIG_IsNewObj(res4)) delete arg4; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_VectorVector3___setitem__(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:11679:104: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 11679 | SWIGINTERN VALUE _wrap_VectorVector3___setitem__(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_VectorOBMol___getitem__(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:12108:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 12108 | if (!_v) goto check_1; return _wrap_VectorOBMol___getitem____SWIG_1(nargs, args, self);} check_1: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:12108:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 12108 | if (!_v) goto check_1; return _wrap_VectorOBMol___getitem____SWIG_1(nargs, args, self);} check_1: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_VectorOBMol___setitem____SWIG_1(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:12170:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 12170 | if (SWIG_IsNewObj(res4)) delete arg4; return vresult; fail: if (SWIG_IsNewObj(res4)) delete arg4; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:12170:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 12170 | if (SWIG_IsNewObj(res4)) delete arg4; return vresult; fail: if (SWIG_IsNewObj(res4)) delete arg4; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_VectorOBMol___setitem__(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:12171:102: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 12171 | SWIGINTERN VALUE _wrap_VectorOBMol___setitem__(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_VectorOBBond___getitem__(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:12598:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 12598 | if (!_v) goto check_1; return _wrap_VectorOBBond___getitem____SWIG_1(nargs, args, self);} check_1: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:12598:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 12598 | if (!_v) goto check_1; return _wrap_VectorOBBond___getitem____SWIG_1(nargs, args, self);} check_1: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_VectorOBBond___setitem____SWIG_1(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:12660:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 12660 | if (SWIG_IsNewObj(res4)) delete arg4; return vresult; fail: if (SWIG_IsNewObj(res4)) delete arg4; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:12660:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 12660 | if (SWIG_IsNewObj(res4)) delete arg4; return vresult; fail: if (SWIG_IsNewObj(res4)) delete arg4; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_VectorOBBond___setitem__(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:12661:103: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 12661 | SWIGINTERN VALUE _wrap_VectorOBBond___setitem__(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_VectorOBResidue___getitem__(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:13090:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 13090 | if (!_v) goto check_1; return _wrap_VectorOBResidue___getitem____SWIG_1(nargs, args, self);} check_1: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:13090:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 13090 | if (!_v) goto check_1; return _wrap_VectorOBResidue___getitem____SWIG_1(nargs, args, self);} check_1: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_VectorOBResidue___setitem____SWIG_1(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:13152:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 13152 | if (SWIG_IsNewObj(res4)) delete arg4; return vresult; fail: if (SWIG_IsNewObj(res4)) delete arg4; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:13152:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 13152 | if (SWIG_IsNewObj(res4)) delete arg4; return vresult; fail: if (SWIG_IsNewObj(res4)) delete arg4; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_VectorOBResidue___setitem__(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:13153:106: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 13153 | SWIGINTERN VALUE _wrap_VectorOBResidue___setitem__(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_VectorOBRing___getitem__(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:13582:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 13582 | if (!_v) goto check_1; return _wrap_VectorOBRing___getitem____SWIG_1(nargs, args, self);} check_1: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:13582:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 13582 | if (!_v) goto check_1; return _wrap_VectorOBRing___getitem____SWIG_1(nargs, args, self);} check_1: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_VectorOBRing___setitem____SWIG_1(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:13644:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 13644 | if (SWIG_IsNewObj(res4)) delete arg4; return vresult; fail: if (SWIG_IsNewObj(res4)) delete arg4; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:13644:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 13644 | if (SWIG_IsNewObj(res4)) delete arg4; return vresult; fail: if (SWIG_IsNewObj(res4)) delete arg4; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_VectorOBRing___setitem__(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:13645:103: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 13645 | SWIGINTERN VALUE _wrap_VectorOBRing___setitem__(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_VectorpOBRing___getitem__(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:14073:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 14073 | if (!_v) goto check_1; return _wrap_VectorpOBRing___getitem____SWIG_1(nargs, args, self);} check_1: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:14073:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 14073 | if (!_v) goto check_1; return _wrap_VectorpOBRing___getitem____SWIG_1(nargs, args, self);} check_1: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_VectorpOBRing___setitem____SWIG_1(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:14134:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 14134 | if (SWIG_IsNewObj(res4)) delete arg4; return vresult; fail: if (SWIG_IsNewObj(res4)) delete arg4; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:14134:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 14134 | if (SWIG_IsNewObj(res4)) delete arg4; return vresult; fail: if (SWIG_IsNewObj(res4)) delete arg4; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_VectorpOBRing___setitem__(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:14135:104: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 14135 | SWIGINTERN VALUE _wrap_VectorpOBRing___setitem__(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_VectorpOBGenericData___getitem__(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:14569:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 14569 | if (!_v) goto check_1; return _wrap_VectorpOBGenericData___getitem____SWIG_1(nargs, args, self);} check_1: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:14569:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 14569 | if (!_v) goto check_1; return _wrap_VectorpOBGenericData___getitem____SWIG_1(nargs, args, self);} check_1: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_VectorpOBGenericData___setitem____SWIG_1(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:14632:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 14632 | if (SWIG_IsNewObj(res4)) delete arg4; return vresult; fail: if (SWIG_IsNewObj(res4)) delete arg4; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:14632:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 14632 | if (SWIG_IsNewObj(res4)) delete arg4; return vresult; fail: if (SWIG_IsNewObj(res4)) delete arg4; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_VectorpOBGenericData___setitem__(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:14633:111: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 14633 | SWIGINTERN VALUE _wrap_VectorpOBGenericData___setitem__(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBTypeTable_set_from_type(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:15277:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 15277 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:15277:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 15277 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBTypeTable_set_to_type(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:15289:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 15289 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:15289:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 15289 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBTypeTable_translate__SWIG_0(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:15304:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 15304 | if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return vresult; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:15304:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 15304 | if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return vresult; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:15305:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 15305 | if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:15305:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 15305 | if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBTypeTable_translate__SWIG_1(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:15324:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 15324 | if (SWIG_IsNewObj(res3)) delete arg3; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:15324:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 15324 | if (SWIG_IsNewObj(res3)) delete arg3; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBResidueData_set_res_name(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:15402:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 15402 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:15402:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 15402 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBResidueData_lookup_bo__SWIG_0(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:15416:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 15416 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:15416:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 15416 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBResidueData_lookup_bo__SWIG_1(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:15434:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 15434 | if (SWIG_IsNewObj(res3)) delete arg3; return vresult; fail: if (SWIG_IsNewObj(res2)) delete arg2; | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:15434:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 15434 | if (SWIG_IsNewObj(res3)) delete arg3; return vresult; fail: if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:15435:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 15435 | if (SWIG_IsNewObj(res3)) delete arg3; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:15435:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 15435 | if (SWIG_IsNewObj(res3)) delete arg3; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBResidueData_lookup_bo(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:15436:102: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 15436 | SWIGINTERN VALUE _wrap_OBResidueData_lookup_bo(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBResidueData_lookup_type(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:15464:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 15464 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:15464:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 15464 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBSqrtTbl(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:15561:92: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 15561 | SWIGINTERN VALUE _wrap_new_OBSqrtTbl(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; argc = nargs; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_new_Vector3(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:15687:6: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 15687 | if (!_v) goto check_3; return _wrap_new_Vector3__SWIG_5(nargs, args, self);} check_3: if (argc == 1) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:15687:29: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 15687 | if (!_v) goto check_3; return _wrap_new_Vector3__SWIG_5(nargs, args, self);} check_3: if (argc == 1) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_Vector3_begin(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:15752:92: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 15752 | SWIGINTERN VALUE _wrap_Vector3_begin(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; argc = nargs + 1; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_Vector3_end(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:15776:90: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 15776 | SWIGINTERN VALUE _wrap_Vector3_end(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; argc = nargs + 1; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_Vector3_set(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:15804:90: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 15804 | SWIGINTERN VALUE _wrap_Vector3_set(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; argc = nargs + 1; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_Vector3_add(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:15912:6: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 15912 | if (!_v) goto check_1; return _wrap_Vector3_add__SWIG_0(nargs, args, self);} check_1: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:15912:29: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 15912 | if (!_v) goto check_1; return _wrap_Vector3_add__SWIG_0(nargs, args, self);} check_1: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_Vector3_x(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:15992:88: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 15992 | SWIGINTERN VALUE _wrap_Vector3_x(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; argc = nargs + 1; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_Vector3_y(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:16005:88: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 16005 | SWIGINTERN VALUE _wrap_Vector3_y(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; argc = nargs + 1; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_Vector3_z(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:16018:88: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 16018 | SWIGINTERN VALUE _wrap_Vector3_z(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; argc = nargs + 1; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap___sub__(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:16172:86: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 16172 | SWIGINTERN VALUE _wrap___sub__(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; argc = nargs; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_Matrix3x3___call__(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:16528:97: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 16528 | SWIGINTERN VALUE _wrap_Matrix3x3___call__(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBBitVec_first_bit(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:16878:97: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 16878 | SWIGINTERN VALUE _wrap_OBBitVec_first_bit(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBBitVec_from_vec_int(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:16970:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 16970 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; fail: if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:16970:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 16970 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; fail: if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBGenericData(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:17122:96: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 17122 | SWIGINTERN VALUE _wrap_new_OBGenericData(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; argc = nargs; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBGenericData_set_attribute(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:17163:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 17163 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:17163:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 17163 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBBase_get_title(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:17266:95: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 17266 | SWIGINTERN VALUE _wrap_OBBase_get_title(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; argc = nargs + 1; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBBase_has_data__SWIG_0(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:17294:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 17294 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:17294:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 17294 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBBase_has_data__SWIG_1(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:17306:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 17306 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:17306:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 17306 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBBase_delete_data__SWIG_3(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:17374:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 17374 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:17374:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 17374 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBBase_delete_data(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:17379:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 17379 | if (!_v) goto check_1; return _wrap_OBBase_delete_data__SWIG_1(nargs, args, self);} check_1: if (argc == 2) { int _v = 0; { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:17379:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 17379 | if (!_v) goto check_1; return _wrap_OBBase_delete_data__SWIG_1(nargs, args, self);} check_1: if (argc == 2) { int _v = 0; { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:17384:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 17384 | if (!_v) goto check_3; return _wrap_OBBase_delete_data__SWIG_0(nargs, args, self);} check_3: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:17384:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 17384 | if (!_v) goto check_3; return _wrap_OBBase_delete_data__SWIG_0(nargs, args, self);} check_3: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBBase_get_data__SWIG_1(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:17432:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 17432 | if (SWIG_IsNewObj(res2)) delete arg2; return vresult; fail: if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:17432:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 17432 | if (SWIG_IsNewObj(res2)) delete arg2; return vresult; fail: if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBBase_get_data__SWIG_2(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:17444:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 17444 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return vresult; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:17444:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 17444 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return vresult; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBCommentData(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:17553:96: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 17553 | SWIGINTERN VALUE _wrap_new_OBCommentData(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[1]; int ii; argc = nargs; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBCommentData_set_data__SWIG_0(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:17571:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 17571 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:17571:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 17571 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBCommentData_set_data(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:17586:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 17586 | if (!_v) goto check_1; return _wrap_OBCommentData_set_data__SWIG_0(nargs, args, self);} check_1: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:17586:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 17586 | if (!_v) goto check_1; return _wrap_OBCommentData_set_data__SWIG_0(nargs, args, self);} check_1: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBExternalBond(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:17646:97: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 17646 | SWIGINTERN VALUE _wrap_new_OBExternalBond(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; argc = nargs; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBPairData_set_value__SWIG_1(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:17806:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 17806 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:17806:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 17806 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBPairData_set_value(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:17810:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 17810 | if (!_v) goto check_1; return _wrap_OBPairData_set_value__SWIG_1(nargs, args, self);} check_1: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:17810:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 17810 | if (!_v) goto check_1; return _wrap_OBPairData_set_value__SWIG_1(nargs, args, self);} check_1: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBSetData_get_data__SWIG_0(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:17872:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 17872 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return vresult; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:17872:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 17872 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return vresult; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBSetData_get_data__SWIG_1(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:17886:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 17886 | if (SWIG_IsNewObj(res2)) delete arg2; return vresult; fail: if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:17886:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 17886 | if (SWIG_IsNewObj(res2)) delete arg2; return vresult; fail: if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBVirtualBond(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:17984:96: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 17984 | SWIGINTERN VALUE _wrap_new_OBVirtualBond(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; argc = nargs; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBRingData(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:18056:93: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 18056 | SWIGINTERN VALUE _wrap_new_OBRingData(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[1]; int ii; argc = nargs; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBUnitCell(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:18180:93: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 18180 | SWIGINTERN VALUE _wrap_new_OBUnitCell(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[1]; int ii; argc = nargs; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBUnitCell_set_data(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:18249:98: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 18249 | SWIGINTERN VALUE _wrap_OBUnitCell_set_data(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[8]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBUnitCell_set_space_group(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:18304:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 18304 | if (!_v) goto check_2; return _wrap_OBUnitCell_set_space_group__SWIG_2(nargs, args, self);} check_2: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:18304:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 18304 | if (!_v) goto check_2; return _wrap_OBUnitCell_set_space_group__SWIG_2(nargs, args, self);} check_2: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBUnitCell_get_a(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:18346:95: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 18346 | SWIGINTERN VALUE _wrap_OBUnitCell_get_a(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; argc = nargs + 1; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBUnitCell_get_b(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:18367:95: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 18367 | SWIGINTERN VALUE _wrap_OBUnitCell_get_b(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; argc = nargs + 1; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBUnitCell_get_c(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:18388:95: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 18388 | SWIGINTERN VALUE _wrap_OBUnitCell_get_c(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; argc = nargs + 1; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBUnitCell_get_alpha(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:18410:99: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 18410 | SWIGINTERN VALUE _wrap_OBUnitCell_get_alpha(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBUnitCell_get_beta(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:18432:98: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 18432 | SWIGINTERN VALUE _wrap_OBUnitCell_get_beta(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBUnitCell_get_gamma(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:18455:99: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 18455 | SWIGINTERN VALUE _wrap_OBUnitCell_get_gamma(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBUnitCell_get_offset(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:18479:100: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 18479 | SWIGINTERN VALUE _wrap_OBUnitCell_get_offset(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBUnitCell_get_space_group(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:18504:105: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 18504 | SWIGINTERN VALUE _wrap_OBUnitCell_get_space_group(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBUnitCell_get_space_group_name(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:18528:110: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 18528 | SWIGINTERN VALUE _wrap_OBUnitCell_get_space_group_name(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBUnitCell_get_lattice_type(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:18574:106: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 18574 | SWIGINTERN VALUE _wrap_OBUnitCell_get_lattice_type(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBUnitCell_get_cell_vectors(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:18603:106: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 18603 | SWIGINTERN VALUE _wrap_OBUnitCell_get_cell_vectors(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBUnitCell_get_cell_matrix(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:18628:105: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 18628 | SWIGINTERN VALUE _wrap_OBUnitCell_get_cell_matrix(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBUnitCell_get_ortho_matrix(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:18652:106: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 18652 | SWIGINTERN VALUE _wrap_OBUnitCell_get_ortho_matrix(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBUnitCell_get_orientation_matrix(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:18678:112: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 18678 | SWIGINTERN VALUE _wrap_OBUnitCell_get_orientation_matrix(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBUnitCell_get_fractional_matrix(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:18704:111: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 18704 | SWIGINTERN VALUE _wrap_OBUnitCell_get_fractional_matrix(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBUnitCell_fractional_to_cartesian(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:18740:113: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 18740 | SWIGINTERN VALUE _wrap_OBUnitCell_fractional_to_cartesian(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBUnitCell_cartesian_to_fractional(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:18776:113: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 18776 | SWIGINTERN VALUE _wrap_OBUnitCell_cartesian_to_fractional(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBUnitCell_wrap_cartesian_coordinate(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:18812:115: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 18812 | SWIGINTERN VALUE _wrap_OBUnitCell_wrap_cartesian_coordinate(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBUnitCell_wrap_fractional_coordinate(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:18848:116: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 18848 | SWIGINTERN VALUE _wrap_OBUnitCell_wrap_fractional_coordinate(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBUnitCell_unwrap_cartesian_near(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:18896:111: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 18896 | SWIGINTERN VALUE _wrap_OBUnitCell_unwrap_cartesian_near(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBUnitCell_unwrap_fractional_near(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:18945:112: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 18945 | SWIGINTERN VALUE _wrap_OBUnitCell_unwrap_fractional_near(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBUnitCell_minimum_image_cartesian(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:18982:113: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 18982 | SWIGINTERN VALUE _wrap_OBUnitCell_minimum_image_cartesian(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBUnitCell_minimum_image_fractional(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:19018:114: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 19018 | SWIGINTERN VALUE _wrap_OBUnitCell_minimum_image_fractional(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBUnitCell_get_space_group_number(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:19063:112: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 19063 | SWIGINTERN VALUE _wrap_OBUnitCell_get_space_group_number(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBUnitCell_get_cell_volume(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:19090:105: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 19090 | SWIGINTERN VALUE _wrap_OBUnitCell_get_cell_volume(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBConformerData(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:19123:98: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 19123 | SWIGINTERN VALUE _wrap_new_OBConformerData(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[1]; int ii; argc = nargs; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBSymmetryData(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:19304:97: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 19304 | SWIGINTERN VALUE _wrap_new_OBSymmetryData(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[1]; int ii; argc = nargs; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBSymmetryData_set_data(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:19337:102: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 19337 | SWIGINTERN VALUE _wrap_OBSymmetryData_set_data(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBTorsion(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:19401:92: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 19401 | SWIGINTERN VALUE _wrap_new_OBTorsion(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[1]; int ii; argc = nargs; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBTorsion_add_torsion(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:19464:100: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 19464 | SWIGINTERN VALUE _wrap_OBTorsion_add_torsion(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[6]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBTorsion_set_angle(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:19496:98: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 19496 | SWIGINTERN VALUE _wrap_OBTorsion_set_angle(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBTorsion_get_angle(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:19540:98: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 19540 | SWIGINTERN VALUE _wrap_OBTorsion_get_angle(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBAngle(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:19672:90: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 19672 | SWIGINTERN VALUE _wrap_new_OBAngle(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[1]; int ii; argc = nargs; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBAngle_set_atoms(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:19757:96: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 19757 | SWIGINTERN VALUE _wrap_OBAngle_set_atoms(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBAngleData_fill_angle_array(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:19807:107: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 19807 | SWIGINTERN VALUE _wrap_OBAngleData_fill_angle_array(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBSerialNums(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:19867:95: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 19867 | SWIGINTERN VALUE _wrap_new_OBSerialNums(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[1]; int ii; argc = nargs; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBVibrationData_set_data__SWIG_0(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:19956:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 19956 | if (SWIG_IsNewObj(res3)) delete arg3; if (SWIG_IsNewObj(res4)) delete arg4; return Qnil; fail: | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:19956:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 19956 | if (SWIG_IsNewObj(res3)) delete arg3; if (SWIG_IsNewObj(res4)) delete arg4; return Qnil; fail: | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:19957:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 19957 | if (SWIG_IsNewObj(res3)) delete arg3; if (SWIG_IsNewObj(res4)) delete arg4; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:19957:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 19957 | if (SWIG_IsNewObj(res3)) delete arg3; if (SWIG_IsNewObj(res4)) delete arg4; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBVibrationData_set_data__SWIG_1(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:19992:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 19992 | if (SWIG_IsNewObj(res3)) delete arg3; if (SWIG_IsNewObj(res4)) delete arg4; if (SWIG_IsNewObj(res5)) delete arg5; return Qnil; | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:19992:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 19992 | if (SWIG_IsNewObj(res3)) delete arg3; if (SWIG_IsNewObj(res4)) delete arg4; if (SWIG_IsNewObj(res5)) delete arg5; return Qnil; | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBVibrationData_set_data(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:19995:103: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 19995 | SWIGINTERN VALUE _wrap_OBVibrationData_set_data(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[6]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBDOSData_set_data(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:20103:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 20103 | if (SWIG_IsNewObj(res3)) delete arg3; if (SWIG_IsNewObj(res4)) delete arg4; if (SWIG_IsNewObj(res5)) delete arg5; return Qnil; | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:20103:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 20103 | if (SWIG_IsNewObj(res3)) delete arg3; if (SWIG_IsNewObj(res4)) delete arg4; if (SWIG_IsNewObj(res5)) delete arg5; return Qnil; | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBOrbital_set_data(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:20180:97: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 20180 | SWIGINTERN VALUE _wrap_OBOrbital_set_data(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBOrbitalData_set_homo(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:20307:101: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 20307 | SWIGINTERN VALUE _wrap_OBOrbitalData_set_homo(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBElectronicTransitionData_set_data(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:20465:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 20465 | if (SWIG_IsNewObj(res2)) delete arg2; if (SWIG_IsNewObj(res3)) delete arg3; return Qnil; fail: | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:20465:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 20465 | if (SWIG_IsNewObj(res2)) delete arg2; if (SWIG_IsNewObj(res3)) delete arg3; return Qnil; fail: | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:20466:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 20466 | if (SWIG_IsNewObj(res2)) delete arg2; if (SWIG_IsNewObj(res3)) delete arg3; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:20466:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 20466 | if (SWIG_IsNewObj(res2)) delete arg2; if (SWIG_IsNewObj(res3)) delete arg3; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBElectronicTransitionData_set_edipole(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:20480:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 20480 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; fail: if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:20480:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 20480 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; fail: if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBElectronicTransitionData_set_rotatory_strengths_velocity(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:20494:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 20494 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; fail: if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:20494:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 20494 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; fail: if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBElectronicTransitionData_set_rotatory_strengths_length(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:20508:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 20508 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; fail: if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:20508:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 20508 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; fail: if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBVectorData_set_data(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:20676:100: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 20676 | SWIGINTERN VALUE _wrap_OBVectorData_set_data(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBFreeGridPoint(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:20768:98: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 20768 | SWIGINTERN VALUE _wrap_new_OBFreeGridPoint(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; argc = nargs; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBGridData_get_axes(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21101:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 21101 | if (!_v) goto check_1; return _wrap_OBGridData_get_axes__SWIG_0(nargs, args, self);} check_1: if (argc == 4) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21101:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 21101 | if (!_v) goto check_1; return _wrap_OBGridData_get_axes__SWIG_0(nargs, args, self);} check_1: if (argc == 4) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBGridData_get_number_of_points(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21137:110: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 21137 | SWIGINTERN VALUE _wrap_OBGridData_get_number_of_points(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBGridData_get_value(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21191:99: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 21191 | SWIGINTERN VALUE _wrap_OBGridData_get_value(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBGridData_get_origin_vector(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21243:107: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 21243 | SWIGINTERN VALUE _wrap_OBGridData_get_origin_vector(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBGridData_set_limits(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21345:6: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 21345 | if (!_v) goto check_1; { void *vptr = 0; | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21345:29: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 21345 | if (!_v) goto check_1; { void *vptr = 0; | ^ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21347:6: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 21347 | if (!_v) goto check_1; { void *vptr = 0; | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21347:29: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 21347 | if (!_v) goto check_1; { void *vptr = 0; | ^ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21349:6: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 21349 | if (!_v) goto check_1; { void *vptr = 0; | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21349:29: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 21349 | if (!_v) goto check_1; { void *vptr = 0; | ^ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21351:6: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 21351 | if (!_v) goto check_1; return _wrap_OBGridData_set_limits__SWIG_0(nargs, args, self);} check_1: if (argc == 5) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21351:29: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 21351 | if (!_v) goto check_1; return _wrap_OBGridData_set_limits__SWIG_0(nargs, args, self);} check_1: if (argc == 5) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBGridData_set_values(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21387:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 21387 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; fail: if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21387:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 21387 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; fail: if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_CharPtrLess___call__(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21455:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 21455 | if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return vresult; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21455:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 21455 | if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return vresult; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21456:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 21456 | if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21456:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 21456 | if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBPlugin_display__SWIG_0(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21520:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 21520 | if (alloc4 == SWIG_NEWOBJ) delete[] buf4; return vresult; fail: if (alloc3 == SWIG_NEWOBJ) delete[] buf3; | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21520:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 21520 | if (alloc4 == SWIG_NEWOBJ) delete[] buf4; return vresult; fail: if (alloc3 == SWIG_NEWOBJ) delete[] buf3; | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21521:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 21521 | if (alloc4 == SWIG_NEWOBJ) delete[] buf4; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21521:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 21521 | if (alloc4 == SWIG_NEWOBJ) delete[] buf4; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBPlugin_display__SWIG_1(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21539:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 21539 | if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21539:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 21539 | if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBPlugin_display(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21540:95: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 21540 | SWIGINTERN VALUE _wrap_OBPlugin_display(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; argc = nargs + 1; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBPlugin_make_instance(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21561:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 21561 | if (SWIG_IsNewObj(res2)) delete arg2; return vresult; fail: if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21561:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 21561 | if (SWIG_IsNewObj(res2)) delete arg2; return vresult; fail: if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBPlugin_get_plugin(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21579:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 21579 | if (alloc1 == SWIG_NEWOBJ) delete[] buf1; if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return vresult; fail: | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21579:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 21579 | if (alloc1 == SWIG_NEWOBJ) delete[] buf1; if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return vresult; fail: | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21580:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 21580 | if (alloc1 == SWIG_NEWOBJ) delete[] buf1; if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21580:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 21580 | if (alloc1 == SWIG_NEWOBJ) delete[] buf1; if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBPlugin_list_as_vector(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21607:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 21607 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return vresult; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21607:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 21607 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return vresult; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21608:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 21608 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21608:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 21608 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBPlugin_list__SWIG_0(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21621:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 21621 | if (alloc1 == SWIG_NEWOBJ) delete[] buf1; if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; fail: | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21621:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 21621 | if (alloc1 == SWIG_NEWOBJ) delete[] buf1; if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; fail: | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21622:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 21622 | if (alloc1 == SWIG_NEWOBJ) delete[] buf1; if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21622:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 21622 | if (alloc1 == SWIG_NEWOBJ) delete[] buf1; if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBPlugin_list__SWIG_1(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21631:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 21631 | if (alloc1 == SWIG_NEWOBJ) delete[] buf1; if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; fail: | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21631:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 21631 | if (alloc1 == SWIG_NEWOBJ) delete[] buf1; if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; fail: | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21632:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 21632 | if (alloc1 == SWIG_NEWOBJ) delete[] buf1; if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21632:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 21632 | if (alloc1 == SWIG_NEWOBJ) delete[] buf1; if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBPlugin_list__SWIG_2(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21639:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 21639 | if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return Qnil; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21639:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 21639 | if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return Qnil; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBPlugin_list(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21640:92: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 21640 | SWIGINTERN VALUE _wrap_OBPlugin_list(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; argc = nargs; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBPlugin_list_as_string__SWIG_0(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21658:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 21658 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return vresult; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21658:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 21658 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return vresult; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21659:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 21659 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21659:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 21659 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBPlugin_list_as_string(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21668:102: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 21668 | SWIGINTERN VALUE _wrap_OBPlugin_list_as_string(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBPlugin_begin(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21692:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 21692 | if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return vresult; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21692:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 21692 | if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return vresult; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBPlugin_end(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21702:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 21702 | if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return vresult; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21702:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 21702 | if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return vresult; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBError__SWIG_0(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21770:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 21770 | if (SWIG_IsNewObj(res3)) delete arg3; if (SWIG_IsNewObj(res4)) delete arg4; if (SWIG_IsNewObj(res5)) delete arg5; return self; | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21770:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 21770 | if (SWIG_IsNewObj(res3)) delete arg3; if (SWIG_IsNewObj(res4)) delete arg4; if (SWIG_IsNewObj(res5)) delete arg5; return self; | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21772:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 21772 | if (SWIG_IsNewObj(res4)) delete arg4; if (SWIG_IsNewObj(res5)) delete arg5; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21772:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 21772 | if (SWIG_IsNewObj(res4)) delete arg4; if (SWIG_IsNewObj(res5)) delete arg5; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBError__SWIG_1(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21800:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 21800 | if (SWIG_IsNewObj(res3)) delete arg3; if (SWIG_IsNewObj(res4)) delete arg4; if (SWIG_IsNewObj(res5)) delete arg5; return self; | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21800:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 21800 | if (SWIG_IsNewObj(res3)) delete arg3; if (SWIG_IsNewObj(res4)) delete arg4; if (SWIG_IsNewObj(res5)) delete arg5; return self; | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21802:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 21802 | if (SWIG_IsNewObj(res4)) delete arg4; if (SWIG_IsNewObj(res5)) delete arg5; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21802:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 21802 | if (SWIG_IsNewObj(res4)) delete arg4; if (SWIG_IsNewObj(res5)) delete arg5; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBError__SWIG_2(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21826:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 21826 | if (SWIG_IsNewObj(res3)) delete arg3; if (SWIG_IsNewObj(res4)) delete arg4; return self; fail: | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21826:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 21826 | if (SWIG_IsNewObj(res3)) delete arg3; if (SWIG_IsNewObj(res4)) delete arg4; return self; fail: | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21827:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 21827 | if (SWIG_IsNewObj(res1)) delete arg1; if (SWIG_IsNewObj(res2)) delete arg2; if (SWIG_IsNewObj(res3)) delete arg3; | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21827:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 21827 | if (SWIG_IsNewObj(res1)) delete arg1; if (SWIG_IsNewObj(res2)) delete arg2; if (SWIG_IsNewObj(res3)) delete arg3; | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21828:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 21828 | if (SWIG_IsNewObj(res4)) delete arg4; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21828:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 21828 | if (SWIG_IsNewObj(res4)) delete arg4; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBError__SWIG_3(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21848:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 21848 | if (SWIG_IsNewObj(res3)) delete arg3; return self; fail: if (SWIG_IsNewObj(res1)) delete arg1; | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21848:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 21848 | if (SWIG_IsNewObj(res3)) delete arg3; return self; fail: if (SWIG_IsNewObj(res1)) delete arg1; | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21849:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 21849 | if (SWIG_IsNewObj(res2)) delete arg2; if (SWIG_IsNewObj(res3)) delete arg3; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21849:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 21849 | if (SWIG_IsNewObj(res2)) delete arg2; if (SWIG_IsNewObj(res3)) delete arg3; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBError__SWIG_4(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21864:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 21864 | if (SWIG_IsNewObj(res1)) delete arg1; if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21864:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 21864 | if (SWIG_IsNewObj(res1)) delete arg1; if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBError__SWIG_5(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21873:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 21873 | if (SWIG_IsNewObj(res1)) delete arg1; return self; fail: if (SWIG_IsNewObj(res1)) delete arg1; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21873:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 21873 | if (SWIG_IsNewObj(res1)) delete arg1; return self; fail: if (SWIG_IsNewObj(res1)) delete arg1; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBError(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:21888:90: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 21888 | SWIGINTERN VALUE _wrap_new_OBError(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[6]; int ii; argc = nargs; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMessageHandler_throw_error__SWIG_2(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22059:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 22059 | if (SWIG_IsNewObj(res3)) delete arg3; return Qnil; fail: if (SWIG_IsNewObj(res2)) delete arg2; | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22059:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 22059 | if (SWIG_IsNewObj(res3)) delete arg3; return Qnil; fail: if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22060:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 22060 | if (SWIG_IsNewObj(res3)) delete arg3; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22060:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 22060 | if (SWIG_IsNewObj(res3)) delete arg3; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMessageHandler_throw_error__SWIG_3(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22080:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 22080 | if (SWIG_IsNewObj(res3)) delete arg3; return Qnil; fail: if (SWIG_IsNewObj(res2)) delete arg2; | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22080:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 22080 | if (SWIG_IsNewObj(res3)) delete arg3; return Qnil; fail: if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22081:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 22081 | if (SWIG_IsNewObj(res3)) delete arg3; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22081:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 22081 | if (SWIG_IsNewObj(res3)) delete arg3; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMessageHandler_throw_error__SWIG_4(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22098:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 22098 | if (SWIG_IsNewObj(res2)) delete arg2; if (SWIG_IsNewObj(res3)) delete arg3; return Qnil; fail: | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22098:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 22098 | if (SWIG_IsNewObj(res2)) delete arg2; if (SWIG_IsNewObj(res3)) delete arg3; return Qnil; fail: | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22099:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 22099 | if (SWIG_IsNewObj(res2)) delete arg2; if (SWIG_IsNewObj(res3)) delete arg3; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22099:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 22099 | if (SWIG_IsNewObj(res2)) delete arg2; if (SWIG_IsNewObj(res3)) delete arg3; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBFormat_find_type(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22312:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 22312 | if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return vresult; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22312:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 22312 | if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return vresult; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBFormat_register_format__SWIG_0(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22442:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 22442 | if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return vresult; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22442:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 22442 | if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return vresult; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22443:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 22443 | if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22443:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 22443 | if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBFormat_register_format__SWIG_1(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22455:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 22455 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22455:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 22455 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBFormat_register_format(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22456:103: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 22456 | SWIGINTERN VALUE _wrap_OBFormat_register_format(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBFormat_display__SWIG_0(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22482:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 22482 | if (alloc4 == SWIG_NEWOBJ) delete[] buf4; return vresult; fail: if (alloc3 == SWIG_NEWOBJ) delete[] buf3; | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22482:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 22482 | if (alloc4 == SWIG_NEWOBJ) delete[] buf4; return vresult; fail: if (alloc3 == SWIG_NEWOBJ) delete[] buf3; | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22483:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 22483 | if (alloc4 == SWIG_NEWOBJ) delete[] buf4; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22483:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 22483 | if (alloc4 == SWIG_NEWOBJ) delete[] buf4; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBFormat_display__SWIG_1(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22501:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 22501 | if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22501:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 22501 | if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBFormat_display(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22502:95: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 22502 | SWIGINTERN VALUE _wrap_OBFormat_display(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; argc = nargs + 1; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBFormat_format_from_mime(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22516:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 22516 | if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return vresult; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22516:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 22516 | if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return vresult; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBConversion(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22595:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 22595 | if (!_v) goto check_5; return _wrap_new_OBConversion__SWIG_0(nargs, args, self);} check_5: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22595:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 22595 | if (!_v) goto check_5; return _wrap_new_OBConversion__SWIG_0(nargs, args, self);} check_5: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBConversion_register_format__SWIG_0(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22621:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 22621 | if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return vresult; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22621:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 22621 | if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return vresult; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22622:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 22622 | if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22622:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 22622 | if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBConversion_register_format__SWIG_1(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22635:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 22635 | if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22635:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 22635 | if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBConversion_register_format(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22636:107: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 22636 | SWIGINTERN VALUE _wrap_OBConversion_register_format(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBConversion_find_format__SWIG_0(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22651:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 22651 | if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return vresult; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22651:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 22651 | if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return vresult; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBConversion_format_from_ext__SWIG_0(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22677:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 22677 | if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return vresult; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22677:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 22677 | if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return vresult; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBConversion_format_from_ext__SWIG_1(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22692:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 22692 | if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return vresult; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22692:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 22692 | if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return vresult; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBConversion_format_from_mime(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22736:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 22736 | if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return vresult; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22736:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 22736 | if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return vresult; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBConversion_set_in_stream(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22781:105: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 22781 | SWIGINTERN VALUE _wrap_OBConversion_set_in_stream(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBConversion_set_out_stream(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22810:106: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 22810 | SWIGINTERN VALUE _wrap_OBConversion_set_out_stream(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBConversion_set_in_and_out_formats__SWIG_0(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22835:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 22835 | if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return vresult; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22835:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 22835 | if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return vresult; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22836:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 22836 | if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22836:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 22836 | if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBConversion_set_in_and_out_formats__SWIG_1(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22853:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 22853 | if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return vresult; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22853:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 22853 | if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return vresult; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22854:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 22854 | if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22854:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 22854 | if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBConversion_set_in_and_out_formats__SWIG_2(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22869:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 22869 | if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return vresult; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22869:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 22869 | if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return vresult; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22870:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 22870 | if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22870:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 22870 | if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBConversion_set_in_and_out_formats(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22928:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 22928 | if (!_v) goto check_1; return _wrap_OBConversion_set_in_and_out_formats__SWIG_5(nargs, args, self);} check_1: | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22928:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 22928 | if (!_v) goto check_1; return _wrap_OBConversion_set_in_and_out_formats__SWIG_5(nargs, args, self);} check_1: | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22931:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 22931 | if (!_v) goto check_3; { void *vptr = 0; int res = SWIG_ConvertPtr(argv[2], &vptr, SWIGTYPE_p_OpenBabel__OBFormat, 0); | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22931:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 22931 | if (!_v) goto check_3; { void *vptr = 0; int res = SWIG_ConvertPtr(argv[2], &vptr, SWIGTYPE_p_OpenBabel__OBFormat, 0); | ^ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22936:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 22936 | if (!_v) goto check_5; { void *vptr = 0; int res = SWIG_ConvertPtr(argv[2], &vptr, SWIGTYPE_p_OpenBabel__OBFormat, 0); | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22936:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 22936 | if (!_v) goto check_5; { void *vptr = 0; int res = SWIG_ConvertPtr(argv[2], &vptr, SWIGTYPE_p_OpenBabel__OBFormat, 0); | ^ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBConversion_set_in_format__SWIG_0(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22960:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 22960 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22960:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 22960 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBConversion_set_in_format__SWIG_1(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22972:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 22972 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:22972:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 22972 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBConversion_set_in_format(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:23004:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 23004 | if (!_v) goto check_3; return _wrap_OBConversion_set_in_format__SWIG_2(nargs, args, self);} check_3: if (argc == 3) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:23004:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 23004 | if (!_v) goto check_3; return _wrap_OBConversion_set_in_format__SWIG_2(nargs, args, self);} check_3: if (argc == 3) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBConversion_set_out_format__SWIG_0(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:23024:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 23024 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:23024:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 23024 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBConversion_set_out_format__SWIG_1(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:23036:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 23036 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:23036:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 23036 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBConversion_set_out_format(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:23068:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 23068 | if (!_v) goto check_3; return _wrap_OBConversion_set_out_format__SWIG_2(nargs, args, self);} check_3: if (argc == 3) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:23068:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 23068 | if (!_v) goto check_3; return _wrap_OBConversion_set_out_format__SWIG_2(nargs, args, self);} check_3: if (argc == 3) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBConversion_is_option__SWIG_0(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:23191:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 23191 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return vresult; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:23191:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 23191 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return vresult; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBConversion_is_option__SWIG_1(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:23203:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 23203 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:23203:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 23203 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBConversion_is_option(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:23204:101: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 23204 | SWIGINTERN VALUE _wrap_OBConversion_is_option(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBConversion_add_option__SWIG_0(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:23242:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 23242 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; if (alloc4 == SWIG_NEWOBJ) delete[] buf4; return Qnil; fail: | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:23242:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 23242 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; if (alloc4 == SWIG_NEWOBJ) delete[] buf4; return Qnil; fail: | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:23243:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 23243 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; if (alloc4 == SWIG_NEWOBJ) delete[] buf4; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:23243:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 23243 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; if (alloc4 == SWIG_NEWOBJ) delete[] buf4; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBConversion_add_option__SWIG_1(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:23257:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 23257 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:23257:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 23257 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBConversion_add_option(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:23269:102: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 23269 | SWIGINTERN VALUE _wrap_OBConversion_add_option(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBConversion_remove_option(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:23292:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 23292 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return vresult; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:23292:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 23292 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return vresult; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBConversion_set_options(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:23306:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 23306 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:23306:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 23306 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBConversion_register_option_param(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:23344:113: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 23344 | SWIGINTERN VALUE _wrap_OBConversion_register_option_param(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBConversion_copy_options(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:23388:104: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 23388 | SWIGINTERN VALUE _wrap_OBConversion_copy_options(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; | ^~~~ [ 88%] Building CXX object test/CMakeFiles/test_runner.dir/lssrtest.cpp.o cd /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/test && /usr/bin/g++ -DFORMATDIR=\"/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/lib64//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RAPIDJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/x86_64-redhat-linux-gnu/include -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/data -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/include -I/usr/include/eigen3 -I/builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/test -isystem /usr/lib64/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -pthread -DNDEBUG -O3 -DNDEBUG -fPIE -pthread -std=gnu++11 -o CMakeFiles/test_runner.dir/lssrtest.cpp.o -c /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/test/lssrtest.cpp /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBConversion_convert(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:23436:99: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 23436 | SWIGINTERN VALUE _wrap_OBConversion_convert(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBConversion_set_first_input(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:23521:107: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 23521 | SWIGINTERN VALUE _wrap_OBConversion_set_first_input(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBConversion_set_one_object_only(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:23566:111: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 23566 | SWIGINTERN VALUE _wrap_OBConversion_set_one_object_only(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBConversion_write(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:23630:97: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 23630 | SWIGINTERN VALUE _wrap_OBConversion_write(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBConversion_write_string(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:23662:104: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 23662 | SWIGINTERN VALUE _wrap_OBConversion_write_string(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBConversion_read(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:23715:96: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 23715 | SWIGINTERN VALUE _wrap_OBConversion_read(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBConversion_report_number_converted(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:23788:115: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 23788 | SWIGINTERN VALUE _wrap_OBConversion_report_number_converted(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBResidue(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:23829:92: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 23829 | SWIGINTERN VALUE _wrap_new_OBResidue(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[1]; int ii; argc = nargs; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBResidue_set_name(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:23882:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 23882 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:23882:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 23882 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBResidue_set_num(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:23905:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 23905 | if (!_v) goto check_1; return _wrap_OBResidue_set_num__SWIG_0(nargs, args, self);} check_1: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:23905:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 23905 | if (!_v) goto check_1; return _wrap_OBResidue_set_num__SWIG_0(nargs, args, self);} check_1: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBResidue_set_atom_id(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:23960:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 23960 | if (SWIG_IsNewObj(res3)) delete arg3; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:23960:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 23960 | if (SWIG_IsNewObj(res3)) delete arg3; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBResidue_get_bonds(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:24082:98: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 24082 | SWIGINTERN VALUE _wrap_OBResidue_get_bonds(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBInternalCoord(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:24455:98: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 24455 | SWIGINTERN VALUE _wrap_new_OBInternalCoord(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[6]; int ii; argc = nargs; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_get_exact_mass(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:24514:93: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 24514 | SWIGINTERN VALUE _wrap_get_exact_mass(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; argc = nargs; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtom_set_type__SWIG_1(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:25224:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 25224 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:25224:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 25224 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtom_set_type(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:25228:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 25228 | if (!_v) goto check_1; return _wrap_OBAtom_set_type__SWIG_1(nargs, args, self);} check_1: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:25228:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 25228 | if (!_v) goto check_1; return _wrap_OBAtom_set_type__SWIG_1(nargs, args, self);} check_1: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtom_set_vector(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:25281:96: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 25281 | SWIGINTERN VALUE _wrap_OBAtom_set_vector(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtom_set_aromatic(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:25323:98: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 25323 | SWIGINTERN VALUE _wrap_OBAtom_set_aromatic(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtom_set_in_ring(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:25343:97: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 25343 | SWIGINTERN VALUE _wrap_OBAtom_set_in_ring(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtom_get_vector(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:25578:96: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 25578 | SWIGINTERN VALUE _wrap_OBAtom_get_vector(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtom_get_distance(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:25754:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 25754 | if (!_v) goto check_2; return _wrap_OBAtom_get_distance__SWIG_2(nargs, args, self);} check_2: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:25754:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 25754 | if (!_v) goto check_2; return _wrap_OBAtom_get_distance__SWIG_2(nargs, args, self);} check_2: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtom_get_angle(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:25791:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 25791 | if (!_v) goto check_1; return _wrap_OBAtom_get_angle__SWIG_1(nargs, args, self);} check_1: if (argc == 3) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:25791:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 25791 | if (!_v) goto check_1; return _wrap_OBAtom_get_angle__SWIG_1(nargs, args, self);} check_1: if (argc == 3) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtom_explicit_hydrogen_count(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:25914:109: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 25914 | SWIGINTERN VALUE _wrap_OBAtom_explicit_hydrogen_count(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtom_has_alpha_beta_unsat(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:26189:106: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 26189 | SWIGINTERN VALUE _wrap_OBAtom_has_alpha_beta_unsat(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtom_matches_smarts(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:26263:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 26263 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:26263:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 26263 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBBond_set_length(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:26374:96: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 26374 | SWIGINTERN VALUE _wrap_OBBond_set_length(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBBond_set_aromatic(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:26415:98: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 26415 | SWIGINTERN VALUE _wrap_OBBond_set_aromatic(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBBond_set_wedge(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:26435:95: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 26435 | SWIGINTERN VALUE _wrap_OBBond_set_wedge(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; argc = nargs + 1; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBBond_set_hash(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:26454:94: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 26454 | SWIGINTERN VALUE _wrap_OBBond_set_hash(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; argc = nargs + 1; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBBond_set_wedge_or_hash(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:26473:103: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 26473 | SWIGINTERN VALUE _wrap_OBBond_set_wedge_or_hash(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBBond_set_in_ring(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:26493:97: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 26493 | SWIGINTERN VALUE _wrap_OBBond_set_in_ring(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBBond_set_closure(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:26513:97: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 26513 | SWIGINTERN VALUE _wrap_OBBond_set_closure(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBBond_get_begin_atom(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:26586:100: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 26586 | SWIGINTERN VALUE _wrap_OBBond_get_begin_atom(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBBond_get_end_atom(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:26611:98: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 26611 | SWIGINTERN VALUE _wrap_OBBond_get_end_atom(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBBond_is_rotor(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:26704:94: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 26704 | SWIGINTERN VALUE _wrap_OBBond_is_rotor(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; argc = nargs + 1; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBMol(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:26826:88: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 26826 | SWIGINTERN VALUE _wrap_new_OBMol(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[1]; int ii; argc = nargs; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMol_add_atom(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:26916:93: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 26916 | SWIGINTERN VALUE _wrap_OBMol_add_atom(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; argc = nargs + 1; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMol_add_bond(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:26998:93: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 26998 | SWIGINTERN VALUE _wrap_OBMol_add_bond(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[7]; int ii; argc = nargs + 1; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMol_new_atom(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:27042:93: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 27042 | SWIGINTERN VALUE _wrap_OBMol_new_atom(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; argc = nargs + 1; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMol_new_bond(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:27068:93: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 27068 | SWIGINTERN VALUE _wrap_OBMol_new_bond(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; argc = nargs + 1; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMol_delete_atom(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:27106:96: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 27106 | SWIGINTERN VALUE _wrap_OBMol_delete_atom(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMol_delete_bond(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:27138:96: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 27138 | SWIGINTERN VALUE _wrap_OBMol_delete_bond(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMol_delete_residue(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:27170:99: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 27170 | SWIGINTERN VALUE _wrap_OBMol_delete_residue(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMol_end_modify(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:27197:95: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 27197 | SWIGINTERN VALUE _wrap_OBMol_end_modify(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; argc = nargs + 1; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMol_get_title(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:27245:94: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 27245 | SWIGINTERN VALUE _wrap_OBMol_get_title(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; argc = nargs + 1; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMol_num_rotors(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:27295:95: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 27295 | SWIGINTERN VALUE _wrap_OBMol_num_rotors(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; argc = nargs + 1; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMol_get_bond(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:27389:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 27389 | if (!_v) goto check_2; { void *vptr = 0; int res = SWIG_ConvertPtr(argv[2], &vptr, SWIGTYPE_p_OpenBabel__OBAtom, 0); | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:27389:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 27389 | if (!_v) goto check_2; { void *vptr = 0; int res = SWIG_ConvertPtr(argv[2], &vptr, SWIGTYPE_p_OpenBabel__OBAtom, 0); | ^ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMol_get_torsion(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:27461:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 27461 | if (!_v) goto check_1; { void *vptr = 0; int res = SWIG_ConvertPtr(argv[3], &vptr, SWIGTYPE_p_OpenBabel__OBAtom, 0); | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:27461:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 27461 | if (!_v) goto check_1; { void *vptr = 0; int res = SWIG_ConvertPtr(argv[3], &vptr, SWIGTYPE_p_OpenBabel__OBAtom, 0); | ^ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:27464:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 27464 | if (!_v) goto check_1; return _wrap_OBMol_get_torsion__SWIG_1(nargs, args, self);} check_1: if (argc == 5) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:27464:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 27464 | if (!_v) goto check_1; return _wrap_OBMol_get_torsion__SWIG_1(nargs, args, self);} check_1: if (argc == 5) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMol_get_spaced_formula(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:27555:103: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 27555 | SWIGINTERN VALUE _wrap_OBMol_get_spaced_formula(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMol_get_mol_wt(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:27589:95: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 27589 | SWIGINTERN VALUE _wrap_OBMol_get_mol_wt(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; argc = nargs + 1; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMol_get_exact_mass(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:27611:99: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 27611 | SWIGINTERN VALUE _wrap_OBMol_get_exact_mass(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMol_set_aromatic_perceived(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:27799:107: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 27799 | SWIGINTERN VALUE _wrap_OBMol_set_aromatic_perceived(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMol_set_sssrperceived(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:27819:102: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 27819 | SWIGINTERN VALUE _wrap_OBMol_set_sssrperceived(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMol_set_lssrperceived(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:27839:102: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 27839 | SWIGINTERN VALUE _wrap_OBMol_set_lssrperceived(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMol_set_ring_atoms_and_bonds_perceived(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:27860:119: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 27860 | SWIGINTERN VALUE _wrap_OBMol_set_ring_atoms_and_bonds_perceived(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMol_set_atom_types_perceived(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:27881:109: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 27881 | SWIGINTERN VALUE _wrap_OBMol_set_atom_types_perceived(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMol_set_ring_types_perceived(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:27901:109: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 27901 | SWIGINTERN VALUE _wrap_OBMol_set_ring_types_perceived(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMol_set_chains_perceived(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:27921:105: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 27921 | SWIGINTERN VALUE _wrap_OBMol_set_chains_perceived(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMol_set_chirality_perceived(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:27941:108: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 27941 | SWIGINTERN VALUE _wrap_OBMol_set_chirality_perceived(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMol_set_partial_charges_perceived(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:27961:114: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 27961 | SWIGINTERN VALUE _wrap_OBMol_set_partial_charges_perceived(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMol_set_hybridization_perceived(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:27982:112: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 27982 | SWIGINTERN VALUE _wrap_OBMol_set_hybridization_perceived(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMol_set_closure_bonds_perceived(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:28002:112: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 28002 | SWIGINTERN VALUE _wrap_OBMol_set_closure_bonds_perceived(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMol_set_hydrogens_added(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:28022:104: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 28022 | SWIGINTERN VALUE _wrap_OBMol_set_hydrogens_added(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMol_set_corrected_for_ph(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:28042:105: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 28042 | SWIGINTERN VALUE _wrap_OBMol_set_corrected_for_ph(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMol_set_spin_multiplicity_assigned(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:28062:115: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 28062 | SWIGINTERN VALUE _wrap_OBMol_set_spin_multiplicity_assigned(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMol_set_is_pattern_structure(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:28083:109: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 28083 | SWIGINTERN VALUE _wrap_OBMol_set_is_pattern_structure(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMol_set_is_reaction(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:28103:100: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 28103 | SWIGINTERN VALUE _wrap_OBMol_set_is_reaction(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMol_set_periodic_mol(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:28123:101: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 28123 | SWIGINTERN VALUE _wrap_OBMol_set_periodic_mol(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMol_to_inertial_frame(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:28227:102: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 28227 | SWIGINTERN VALUE _wrap_OBMol_to_inertial_frame(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMol_translate(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:28260:94: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 28260 | SWIGINTERN VALUE _wrap_OBMol_translate(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; argc = nargs + 1; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMol_delete_hydrogens(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:28328:101: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 28328 | SWIGINTERN VALUE _wrap_OBMol_delete_hydrogens(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMol_add_hydrogens(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:28417:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 28417 | if (!_v) goto check_2; return _wrap_OBMol_add_hydrogens__SWIG_4(nargs, args, self);} check_2: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:28417:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 28417 | if (!_v) goto check_2; return _wrap_OBMol_add_hydrogens__SWIG_4(nargs, args, self);} check_2: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMol_add_new_hydrogens(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:28476:102: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 28476 | SWIGINTERN VALUE _wrap_OBMol_add_new_hydrogens(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMol_strip_salts(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:28503:96: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 28503 | SWIGINTERN VALUE _wrap_OBMol_strip_salts(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMol_separate(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:28529:93: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 28529 | SWIGINTERN VALUE _wrap_OBMol_separate(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; argc = nargs + 1; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMol_copy_substructure(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:28684:102: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 28684 | SWIGINTERN VALUE _wrap_OBMol_copy_substructure(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[8]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMol_correct_for_ph(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:28735:99: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 28735 | SWIGINTERN VALUE _wrap_OBMol_correct_for_ph(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMol_assign_spin_multiplicity(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:28758:109: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 28758 | SWIGINTERN VALUE _wrap_OBMol_assign_spin_multiplicity(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMol_center(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:28785:91: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 28785 | SWIGINTERN VALUE _wrap_OBMol_center(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; argc = nargs + 1; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMol_has_2d(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:29015:91: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 29015 | SWIGINTERN VALUE _wrap_OBMol_has_2d(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; argc = nargs + 1; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMol_get_energy(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:29254:95: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 29254 | SWIGINTERN VALUE _wrap_OBMol_get_energy(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; argc = nargs + 1; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBRing__path_set(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:29642:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 29642 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:29642:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 29642 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBRing_set_type__SWIG_0(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:29766:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 29766 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:29766:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 29766 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBSmartsPattern(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:30082:98: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 30082 | SWIGINTERN VALUE _wrap_new_OBSmartsPattern(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[1]; int ii; argc = nargs; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBSmartsPattern_init__SWIG_0(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:30099:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 30099 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:30099:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 30099 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBSmartsPattern_init__SWIG_1(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:30113:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 30113 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:30113:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 30113 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBSmartsPattern_init(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:30117:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 30117 | if (!_v) goto check_1; return _wrap_OBSmartsPattern_init__SWIG_1(nargs, args, self);} check_1: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:30117:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 30117 | if (!_v) goto check_1; return _wrap_OBSmartsPattern_init__SWIG_1(nargs, args, self);} check_1: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBSmartsMatcher_match(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:30568:100: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 30568 | SWIGINTERN VALUE _wrap_OBSmartsMatcher_match(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[6]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBSSMatch_match(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:30643:94: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 30643 | SWIGINTERN VALUE _wrap_OBSSMatch_match(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; argc = nargs + 1; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_AliasData_set_alias__SWIG_0(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:30697:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 30697 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:30697:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 30697 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_AliasData_set_alias(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:30712:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 30712 | if (!_v) goto check_1; return _wrap_AliasData_set_alias__SWIG_0(nargs, args, self);} check_1: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:30712:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 30712 | if (!_v) goto check_1; return _wrap_AliasData_set_alias__SWIG_0(nargs, args, self);} check_1: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_AliasData_get_alias(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:30734:98: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 30734 | SWIGINTERN VALUE _wrap_AliasData_get_alias(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBFingerprint_find_type(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:30811:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 30811 | if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return vresult; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:30811:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 30811 | if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return vresult; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBFingerprint_get_bit(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:30853:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 30853 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:30853:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 30853 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBFingerprint_get_fingerprint(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:30912:108: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 30912 | SWIGINTERN VALUE _wrap_OBFingerprint_get_fingerprint(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBFingerprint_tanimoto__SWIG_0(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:30957:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 30957 | if (SWIG_IsNewObj(res2)) delete arg2; return vresult; fail: if (SWIG_IsNewObj(res1)) delete arg1; | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:30957:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 30957 | if (SWIG_IsNewObj(res2)) delete arg2; return vresult; fail: if (SWIG_IsNewObj(res1)) delete arg1; | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:30958:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 30958 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:30958:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 30958 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBFingerprint_tanimoto__SWIG_1(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:30973:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 30973 | if (SWIG_IsNewObj(res1)) delete arg1; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:30973:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 30973 | if (SWIG_IsNewObj(res1)) delete arg1; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBFingerprint_tanimoto(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:30977:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 30977 | if (!_v) goto check_1; return _wrap_OBFingerprint_tanimoto__SWIG_1(nargs, args, self);} check_1: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:30977:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 30977 | if (!_v) goto check_1; return _wrap_OBFingerprint_tanimoto__SWIG_1(nargs, args, self);} check_1: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBFingerprint_find_fingerprint(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:30996:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 30996 | if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return vresult; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:30996:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 30996 | if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return vresult; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_FptIndexHeader_fpid_set(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:31063:3: warning: this 'else' clause does not guard... [-Wmisleading-indentation] 31063 | else memset(arg1->fpid,0,15*sizeof(char)); return Qnil; fail: return Qnil; } | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:31063:46: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'else' 31063 | else memset(arg1->fpid,0,15*sizeof(char)); return Qnil; fail: return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_FptIndexHeader_datafilename_set(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:31100:3: warning: this 'else' clause does not guard... [-Wmisleading-indentation] 31100 | else memset(arg1->datafilename,0,256*sizeof(char)); return Qnil; fail: return Qnil; } | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:31100:55: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'else' 31100 | else memset(arg1->datafilename,0,256*sizeof(char)); return Qnil; fail: return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_new_FastSearchIndexer(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:31439:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 31439 | if (!_v) goto check_2; { { int res = SWIG_AsVal_int(argv[2], NULL); _v = SWIG_CheckState(res); } } if (!_v) goto check_2; | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:31439:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 31439 | if (!_v) goto check_2; { { int res = SWIG_AsVal_int(argv[2], NULL); _v = SWIG_CheckState(res); } } if (!_v) goto check_2; | ^ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBDescriptor__SWIG_0(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:31490:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 31490 | if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:31490:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 31490 | if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBDescriptor__SWIG_1(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:31509:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 31509 | if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:31509:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 31509 | if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBDescriptor(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:31510:95: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 31510 | SWIGINTERN VALUE _wrap_new_OBDescriptor(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; argc = nargs; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBDescriptor_find_type(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:31523:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 31523 | if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return vresult; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:31523:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 31523 | if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return vresult; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBDescriptor_predict(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:31550:99: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 31550 | SWIGINTERN VALUE _wrap_OBDescriptor_predict(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBDescriptor_predict_and_save(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:31583:108: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 31583 | SWIGINTERN VALUE _wrap_OBDescriptor_predict_and_save(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBDescriptor_get_string_value(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:31627:108: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 31627 | SWIGINTERN VALUE _wrap_OBDescriptor_get_string_value(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBDescriptor_compare(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:31676:99: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 31676 | SWIGINTERN VALUE _wrap_OBDescriptor_compare(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[6]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBDescriptor_display__SWIG_0(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:31702:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 31702 | if (alloc4 == SWIG_NEWOBJ) delete[] buf4; return vresult; fail: if (alloc3 == SWIG_NEWOBJ) delete[] buf3; | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:31702:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 31702 | if (alloc4 == SWIG_NEWOBJ) delete[] buf4; return vresult; fail: if (alloc3 == SWIG_NEWOBJ) delete[] buf3; | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:31703:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 31703 | if (alloc4 == SWIG_NEWOBJ) delete[] buf4; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:31703:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 31703 | if (alloc4 == SWIG_NEWOBJ) delete[] buf4; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBDescriptor_display__SWIG_1(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:31721:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 31721 | if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:31721:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 31721 | if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBDescriptor_display(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:31722:99: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 31722 | SWIGINTERN VALUE _wrap_OBDescriptor_display(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBDescriptor_order(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:31759:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 31759 | if (!_v) goto check_1; { { int res = SWIG_AsVal_double(argv[2], NULL); _v = SWIG_CheckState(res); } } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:31759:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 31759 | if (!_v) goto check_1; { { int res = SWIG_AsVal_double(argv[2], NULL); _v = SWIG_CheckState(res); } } | ^ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:31760:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 31760 | if (!_v) goto check_1; return _wrap_OBDescriptor_order__SWIG_0(nargs, args, self);} check_1: if (argc == 3) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:31760:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 31760 | if (!_v) goto check_1; return _wrap_OBDescriptor_order__SWIG_0(nargs, args, self);} check_1: if (argc == 3) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBDescriptor_add_properties(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:31791:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 31791 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; fail: if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:31791:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 31791 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; fail: if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBDescriptor_delete_properties(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:31804:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 31804 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; fail: if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:31804:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 31804 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; fail: if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBFFParameter__a_set(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:31940:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 31940 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:31940:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 31940 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBFFParameter__b_set(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:31961:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 31961 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:31961:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 31961 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBFFParameter__c_set(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:31982:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 31982 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:31982:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 31982 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBFFParameter__d_set(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:32003:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 32003 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:32003:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 32003 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBFFParameter__ipar_set(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:32025:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 32025 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:32025:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 32025 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBFFParameter__dpar_set(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:32048:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 32048 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:32048:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 32048 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBForceField_find_type(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:33176:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 33176 | if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return vresult; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:33176:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 33176 | if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return vresult; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBForceField_find_force_field__SWIG_0(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:33201:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 33201 | if (SWIG_IsNewObj(res1)) delete arg1; return vresult; fail: if (SWIG_IsNewObj(res1)) delete arg1; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:33201:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 33201 | if (SWIG_IsNewObj(res1)) delete arg1; return vresult; fail: if (SWIG_IsNewObj(res1)) delete arg1; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBForceField_find_force_field__SWIG_1(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:33210:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 33210 | if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return vresult; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:33210:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 33210 | if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return vresult; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBForceField_setup(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:33280:97: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 33280 | SWIGINTERN VALUE _wrap_OBForceField_setup(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBForceField_get_grid(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:33469:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 33469 | if (alloc4 == SWIG_NEWOBJ) delete[] buf4; return vresult; fail: if (alloc4 == SWIG_NEWOBJ) delete[] buf4; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:33469:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 33469 | if (alloc4 == SWIG_NEWOBJ) delete[] buf4; return vresult; fail: if (alloc4 == SWIG_NEWOBJ) delete[] buf4; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBForceField_get_gradient(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:33674:104: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 33674 | SWIGINTERN VALUE _wrap_OBForceField_get_gradient(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBForceField_energy(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:33708:98: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 33708 | SWIGINTERN VALUE _wrap_OBForceField_energy(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBForceField_e_bond(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:33733:98: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 33733 | SWIGINTERN VALUE _wrap_OBForceField_e_bond(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBForceField_e_angle(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:33758:99: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 33758 | SWIGINTERN VALUE _wrap_OBForceField_e_angle(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBForceField_e_str_bnd(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:33783:101: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 33783 | SWIGINTERN VALUE _wrap_OBForceField_e_str_bnd(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBForceField_e_torsion(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:33808:101: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 33808 | SWIGINTERN VALUE _wrap_OBForceField_e_torsion(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBForceField_e_oop(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:33833:97: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 33833 | SWIGINTERN VALUE _wrap_OBForceField_e_oop(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBForceField_e_vdw(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:33858:97: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 33858 | SWIGINTERN VALUE _wrap_OBForceField_e_vdw(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBForceField_e_electrostatic(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:33883:107: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 33883 | SWIGINTERN VALUE _wrap_OBForceField_e_electrostatic(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBForceField_obfflog(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:33966:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 33966 | if (!_v) goto check_1; return _wrap_OBForceField_obfflog__SWIG_0(nargs, args, self);} check_1: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:33966:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 33966 | if (!_v) goto check_1; return _wrap_OBForceField_obfflog__SWIG_0(nargs, args, self);} check_1: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBForceField_systematic_rotor_search(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:34005:115: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 34005 | SWIGINTERN VALUE _wrap_OBForceField_systematic_rotor_search(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBForceField_systematic_rotor_search_initialize(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:34047:9: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 34047 | VALUE argv[4]; int ii; argc = nargs + 1; argv[0] = self; if (argc > 4) SWIG_fail; for (ii = 1; (ii < argc); ++ii) { | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBForceField_systematic_rotor_search_next_conformer(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:34076:9: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 34076 | VALUE argv[3]; int ii; argc = nargs + 1; argv[0] = self; if (argc > 3) SWIG_fail; for (ii = 1; (ii < argc); ++ii) { | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBForceField_random_rotor_search(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:34119:111: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 34119 | SWIGINTERN VALUE _wrap_OBForceField_random_rotor_search(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBForceField_random_rotor_search_initialize(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:34165:9: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 34165 | VALUE argv[5]; int ii; argc = nargs + 1; argv[0] = self; if (argc > 5) SWIG_fail; for (ii = 1; (ii < argc); ++ii) { | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBForceField_random_rotor_search_next_conformer(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:34194:9: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 34194 | VALUE argv[3]; int ii; argc = nargs + 1; argv[0] = self; if (argc > 3) SWIG_fail; for (ii = 1; (ii < argc); ++ii) { | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBForceField_weighted_rotor_search(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:34227:113: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 34227 | SWIGINTERN VALUE _wrap_OBForceField_weighted_rotor_search(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBForceField_line_search(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:34289:6: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 34289 | if (!_v) goto check_1; return _wrap_OBForceField_line_search__SWIG_0(nargs, args, self);} check_1: if (argc == 3) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:34289:29: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 34289 | if (!_v) goto check_1; return _wrap_OBForceField_line_search__SWIG_0(nargs, args, self);} check_1: if (argc == 3) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBForceField_steepest_descent(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:34355:108: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 34355 | SWIGINTERN VALUE _wrap_OBForceField_steepest_descent(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBForceField_steepest_descent_initialize(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:34406:119: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 34406 | SWIGINTERN VALUE _wrap_OBForceField_steepest_descent_initialize(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBForceField_conjugate_gradients(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:34463:111: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 34463 | SWIGINTERN VALUE _wrap_OBForceField_conjugate_gradients(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBForceField_conjugate_gradients_initialize(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:34515:9: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 34515 | VALUE argv[5]; int ii; argc = nargs + 1; argv[0] = self; if (argc > 5) SWIG_fail; for (ii = 1; (ii < argc); ++ii) { | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBForceField_molecular_dynamics_take_nsteps(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:34593:9: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 34593 | VALUE argv[6]; int ii; argc = nargs + 1; argv[0] = self; if (argc > 6) SWIG_fail; for (ii = 1; (ii < argc); ++ii) { | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBForceField_ignore_calculation(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:34690:110: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 34690 | SWIGINTERN VALUE _wrap_OBForceField_ignore_calculation(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBForceField_vector_angle_derivative(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:34879:115: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 34879 | SWIGINTERN VALUE _wrap_OBForceField_vector_angle_derivative(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[6]; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBForceField_vector_oopderivative(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:34947:112: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 34947 | SWIGINTERN VALUE _wrap_OBForceField_vector_oopderivative(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[8]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBForceField_vector_torsion_derivative(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:35015:117: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 35015 | SWIGINTERN VALUE _wrap_OBForceField_vector_torsion_derivative(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[8]; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBBuilder_build(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:35247:94: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 35247 | SWIGINTERN VALUE _wrap_OBBuilder_build(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; argc = nargs + 1; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBBuilder_add_ring_fragment(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:35284:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 35284 | if (SWIG_IsNewObj(res3)) delete arg3; return Qnil; fail: if (SWIG_IsNewObj(res3)) delete arg3; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:35284:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 35284 | if (SWIG_IsNewObj(res3)) delete arg3; return Qnil; fail: if (SWIG_IsNewObj(res3)) delete arg3; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBBuilder_get_new_bond_vector(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:35323:108: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 35323 | SWIGINTERN VALUE _wrap_OBBuilder_get_new_bond_vector(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBBuilder_connect(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:35404:6: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 35404 | if (!_v) goto check_2; return _wrap_OBBuilder_connect__SWIG_1(nargs, args, self);} check_2: if (argc == 4) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:35404:29: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 35404 | if (!_v) goto check_2; return _wrap_OBBuilder_connect__SWIG_1(nargs, args, self);} check_2: if (argc == 4) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBBuilder_correct_stereo_atoms(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:35459:109: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 35459 | SWIGINTERN VALUE _wrap_OBBuilder_correct_stereo_atoms(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBOp_find_type(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:35520:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 35520 | if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return vresult; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:35520:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 35520 | if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return vresult; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBOp_do__SWIG_0(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:35544:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 35544 | if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:35544:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 35544 | if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBOp_do__SWIG_1(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:35565:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 35565 | if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:35565:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 35565 | if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBOp_do__SWIG_2(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:35580:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 35580 | if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:35580:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 35580 | if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBOp_do(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:35592:86: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 35592 | SWIGINTERN VALUE _wrap_OBOp_do(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[6]; int ii; argc = nargs + 1; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBRotorRule(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:35691:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 35691 | if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:35691:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 35691 | if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBRotor_set_rotor(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:35986:96: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 35986 | SWIGINTERN VALUE _wrap_OBRotor_set_rotor(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/test/lssrtest.cpp: In function 'bool verifyLSSR(const string&, const LSSR&)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/test/lssrtest.cpp:173:8: warning: unused variable 'fail' [-Wunused-variable] 173 | bool fail = false; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBRotor_set(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:36059:90: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 36059 | SWIGINTERN VALUE _wrap_OBRotor_set(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[7]; int ii; argc = nargs + 1; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBRotor_get_dihedral_atoms(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:36109:105: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 36109 | SWIGINTERN VALUE _wrap_OBRotor_get_dihedral_atoms(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBRotorList_setup(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:36368:96: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 36368 | SWIGINTERN VALUE _wrap_OBRotorList_setup(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBRotorList_find_rotors(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:36445:102: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 36445 | SWIGINTERN VALUE _wrap_OBRotorList_find_rotors(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_new_RotorDigit(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:36602:93: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 36602 | SWIGINTERN VALUE _wrap_new_RotorDigit(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[1]; int ii; argc = nargs; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBRotamerList_setup(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:36782:98: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 36782 | SWIGINTERN VALUE _wrap_OBRotamerList_setup(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBRotamerList_add_rotamer(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:36856:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 36856 | if (!_v) goto check_3; return _wrap_OBRotamerList_add_rotamer__SWIG_3(nargs, args, self);} check_3: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:36856:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 36856 | if (!_v) goto check_3; return _wrap_OBRotamerList_add_rotamer__SWIG_3(nargs, args, self);} check_3: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBRotamerList_set_base_coordinate_sets(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:36985:117: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 36985 | SWIGINTERN VALUE _wrap_OBRotamerList_set_base_coordinate_sets(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBMolAtomIter(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:37060:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 37060 | if (!_v) goto check_2; return _wrap_new_OBMolAtomIter__SWIG_1(nargs, args, self);} check_2: if (argc == 1) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:37060:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 37060 | if (!_v) goto check_2; return _wrap_new_OBMolAtomIter__SWIG_1(nargs, args, self);} check_2: if (argc == 1) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomIter_inc(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:37100:96: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 37100 | SWIGINTERN VALUE _wrap_OBMolAtomIter_inc(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomIter_set_type__SWIG_1(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:37270:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 37270 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:37270:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 37270 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomIter_set_type(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:37274:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 37274 | if (!_v) goto check_1; return _wrap_OBMolAtomIter_set_type__SWIG_1(nargs, args, self);} check_1: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:37274:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 37274 | if (!_v) goto check_1; return _wrap_OBMolAtomIter_set_type__SWIG_1(nargs, args, self);} check_1: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomIter_set_vector(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:37320:103: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 37320 | SWIGINTERN VALUE _wrap_OBMolAtomIter_set_vector(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomIter_set_aromatic(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:37373:105: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 37373 | SWIGINTERN VALUE _wrap_OBMolAtomIter_set_aromatic(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomIter_set_in_ring(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:37394:104: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 37394 | SWIGINTERN VALUE _wrap_OBMolAtomIter_set_in_ring(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomIter_get_vector(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:37632:103: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 37632 | SWIGINTERN VALUE _wrap_OBMolAtomIter_get_vector(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomIter_get_distance(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:37811:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 37811 | if (!_v) goto check_2; return _wrap_OBMolAtomIter_get_distance__SWIG_2(nargs, args, self);} check_2: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:37811:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 37811 | if (!_v) goto check_2; return _wrap_OBMolAtomIter_get_distance__SWIG_2(nargs, args, self);} check_2: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomIter_get_angle(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:37849:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 37849 | if (!_v) goto check_1; return _wrap_OBMolAtomIter_get_angle__SWIG_1(nargs, args, self);} check_1: if (argc == 3) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:37849:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 37849 | if (!_v) goto check_1; return _wrap_OBMolAtomIter_get_angle__SWIG_1(nargs, args, self);} check_1: if (argc == 3) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomIter_explicit_hydrogen_count(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:37973:116: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 37973 | SWIGINTERN VALUE _wrap_OBMolAtomIter_explicit_hydrogen_count(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomIter_has_alpha_beta_unsat(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:38271:113: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 38271 | SWIGINTERN VALUE _wrap_OBMolAtomIter_has_alpha_beta_unsat(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomIter_matches_smarts(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:38350:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 38350 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:38350:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 38350 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomIter_get_title(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:38406:102: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 38406 | SWIGINTERN VALUE _wrap_OBMolAtomIter_get_title(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomIter_has_data__SWIG_0(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:38436:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 38436 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:38436:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 38436 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomIter_has_data__SWIG_1(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:38448:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 38448 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:38448:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 38448 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomIter_has_data(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:38463:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 38463 | if (!_v) goto check_1; return _wrap_OBMolAtomIter_has_data__SWIG_2(nargs, args, self);} check_1: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:38463:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 38463 | if (!_v) goto check_1; return _wrap_OBMolAtomIter_has_data__SWIG_2(nargs, args, self);} check_1: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:38465:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 38465 | if (!_v) goto check_2; return _wrap_OBMolAtomIter_has_data__SWIG_0(nargs, args, self);} check_2: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:38465:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 38465 | if (!_v) goto check_2; return _wrap_OBMolAtomIter_has_data__SWIG_0(nargs, args, self);} check_2: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomIter_delete_data__SWIG_3(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:38517:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 38517 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:38517:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 38517 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomIter_delete_data(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:38522:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 38522 | if (!_v) goto check_1; return _wrap_OBMolAtomIter_delete_data__SWIG_1(nargs, args, self);} check_1: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:38522:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 38522 | if (!_v) goto check_1; return _wrap_OBMolAtomIter_delete_data__SWIG_1(nargs, args, self);} check_1: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:38527:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 38527 | if (!_v) goto check_3; return _wrap_OBMolAtomIter_delete_data__SWIG_0(nargs, args, self);} check_3: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:38527:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 38527 | if (!_v) goto check_3; return _wrap_OBMolAtomIter_delete_data__SWIG_0(nargs, args, self);} check_3: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomIter_get_data__SWIG_1(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:38576:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 38576 | if (SWIG_IsNewObj(res2)) delete arg2; return vresult; fail: if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:38576:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 38576 | if (SWIG_IsNewObj(res2)) delete arg2; return vresult; fail: if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomIter_get_data__SWIG_2(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:38588:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 38588 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return vresult; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:38588:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 38588 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return vresult; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBMolAtomDFSIter(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:38710:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 38710 | if (!_v) goto check_2; return _wrap_new_OBMolAtomDFSIter__SWIG_2(nargs, args, self);} check_2: if (argc == 1) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:38710:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 38710 | if (!_v) goto check_2; return _wrap_new_OBMolAtomDFSIter__SWIG_2(nargs, args, self);} check_2: if (argc == 1) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomDFSIter_inc(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:38753:99: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 38753 | SWIGINTERN VALUE _wrap_OBMolAtomDFSIter_inc(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomDFSIter_set_type__SWIG_1(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:38926:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 38926 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:38926:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 38926 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomDFSIter_set_type(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:38930:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 38930 | if (!_v) goto check_1; return _wrap_OBMolAtomDFSIter_set_type__SWIG_1(nargs, args, self);} check_1: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:38930:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 38930 | if (!_v) goto check_1; return _wrap_OBMolAtomDFSIter_set_type__SWIG_1(nargs, args, self);} check_1: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomDFSIter_set_vector(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:38977:106: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 38977 | SWIGINTERN VALUE _wrap_OBMolAtomDFSIter_set_vector(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomDFSIter_set_aromatic(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:39031:108: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 39031 | SWIGINTERN VALUE _wrap_OBMolAtomDFSIter_set_aromatic(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomDFSIter_set_in_ring(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:39053:107: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 39053 | SWIGINTERN VALUE _wrap_OBMolAtomDFSIter_set_in_ring(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomDFSIter_get_vector(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:39291:106: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 39291 | SWIGINTERN VALUE _wrap_OBMolAtomDFSIter_get_vector(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomDFSIter_get_distance(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:39470:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 39470 | if (!_v) goto check_2; return _wrap_OBMolAtomDFSIter_get_distance__SWIG_2(nargs, args, self);} check_2: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:39470:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 39470 | if (!_v) goto check_2; return _wrap_OBMolAtomDFSIter_get_distance__SWIG_2(nargs, args, self);} check_2: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomDFSIter_get_angle(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:39508:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 39508 | if (!_v) goto check_1; return _wrap_OBMolAtomDFSIter_get_angle__SWIG_1(nargs, args, self);} check_1: if (argc == 3) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:39508:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 39508 | if (!_v) goto check_1; return _wrap_OBMolAtomDFSIter_get_angle__SWIG_1(nargs, args, self);} check_1: if (argc == 3) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomDFSIter_explicit_hydrogen_count(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:39632:119: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 39632 | SWIGINTERN VALUE _wrap_OBMolAtomDFSIter_explicit_hydrogen_count(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomDFSIter_has_alpha_beta_unsat(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:39930:116: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 39930 | SWIGINTERN VALUE _wrap_OBMolAtomDFSIter_has_alpha_beta_unsat(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomDFSIter_matches_smarts(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:40009:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 40009 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:40009:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 40009 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomDFSIter_get_title(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:40065:105: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 40065 | SWIGINTERN VALUE _wrap_OBMolAtomDFSIter_get_title(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomDFSIter_has_data__SWIG_0(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:40095:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 40095 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:40095:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 40095 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomDFSIter_has_data__SWIG_1(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:40107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 40107 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:40107:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 40107 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomDFSIter_has_data(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:40122:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 40122 | if (!_v) goto check_1; return _wrap_OBMolAtomDFSIter_has_data__SWIG_2(nargs, args, self);} check_1: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:40122:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 40122 | if (!_v) goto check_1; return _wrap_OBMolAtomDFSIter_has_data__SWIG_2(nargs, args, self);} check_1: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:40124:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 40124 | if (!_v) goto check_2; return _wrap_OBMolAtomDFSIter_has_data__SWIG_0(nargs, args, self);} check_2: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:40124:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 40124 | if (!_v) goto check_2; return _wrap_OBMolAtomDFSIter_has_data__SWIG_0(nargs, args, self);} check_2: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomDFSIter_delete_data__SWIG_3(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:40176:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 40176 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:40176:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 40176 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomDFSIter_delete_data(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:40181:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 40181 | if (!_v) goto check_1; return _wrap_OBMolAtomDFSIter_delete_data__SWIG_1(nargs, args, self);} check_1: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:40181:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 40181 | if (!_v) goto check_1; return _wrap_OBMolAtomDFSIter_delete_data__SWIG_1(nargs, args, self);} check_1: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:40186:6: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 40186 | if (!_v) goto check_3; return _wrap_OBMolAtomDFSIter_delete_data__SWIG_0(nargs, args, self);} check_3: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:40186:29: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 40186 | if (!_v) goto check_3; return _wrap_OBMolAtomDFSIter_delete_data__SWIG_0(nargs, args, self);} check_3: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomDFSIter_get_data__SWIG_1(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:40235:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 40235 | if (SWIG_IsNewObj(res2)) delete arg2; return vresult; fail: if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:40235:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 40235 | if (SWIG_IsNewObj(res2)) delete arg2; return vresult; fail: if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomDFSIter_get_data__SWIG_2(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:40247:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 40247 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return vresult; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:40247:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 40247 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return vresult; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBMolAtomBFSIter(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:40369:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 40369 | if (!_v) goto check_2; return _wrap_new_OBMolAtomBFSIter__SWIG_2(nargs, args, self);} check_2: if (argc == 1) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:40369:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 40369 | if (!_v) goto check_2; return _wrap_new_OBMolAtomBFSIter__SWIG_2(nargs, args, self);} check_2: if (argc == 1) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomBFSIter_inc(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:40412:99: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 40412 | SWIGINTERN VALUE _wrap_OBMolAtomBFSIter_inc(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomBFSIter_set_type__SWIG_1(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:40585:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 40585 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:40585:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 40585 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomBFSIter_set_type(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:40589:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 40589 | if (!_v) goto check_1; return _wrap_OBMolAtomBFSIter_set_type__SWIG_1(nargs, args, self);} check_1: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:40589:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 40589 | if (!_v) goto check_1; return _wrap_OBMolAtomBFSIter_set_type__SWIG_1(nargs, args, self);} check_1: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomBFSIter_set_vector(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:40636:106: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 40636 | SWIGINTERN VALUE _wrap_OBMolAtomBFSIter_set_vector(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomBFSIter_set_aromatic(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:40690:108: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 40690 | SWIGINTERN VALUE _wrap_OBMolAtomBFSIter_set_aromatic(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomBFSIter_set_in_ring(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:40712:107: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 40712 | SWIGINTERN VALUE _wrap_OBMolAtomBFSIter_set_in_ring(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomBFSIter_get_vector(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:40950:106: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 40950 | SWIGINTERN VALUE _wrap_OBMolAtomBFSIter_get_vector(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomBFSIter_get_distance(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:41129:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 41129 | if (!_v) goto check_2; return _wrap_OBMolAtomBFSIter_get_distance__SWIG_2(nargs, args, self);} check_2: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:41129:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 41129 | if (!_v) goto check_2; return _wrap_OBMolAtomBFSIter_get_distance__SWIG_2(nargs, args, self);} check_2: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomBFSIter_get_angle(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:41167:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 41167 | if (!_v) goto check_1; return _wrap_OBMolAtomBFSIter_get_angle__SWIG_1(nargs, args, self);} check_1: if (argc == 3) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:41167:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 41167 | if (!_v) goto check_1; return _wrap_OBMolAtomBFSIter_get_angle__SWIG_1(nargs, args, self);} check_1: if (argc == 3) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomBFSIter_explicit_hydrogen_count(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:41291:119: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 41291 | SWIGINTERN VALUE _wrap_OBMolAtomBFSIter_explicit_hydrogen_count(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomBFSIter_has_alpha_beta_unsat(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:41589:116: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 41589 | SWIGINTERN VALUE _wrap_OBMolAtomBFSIter_has_alpha_beta_unsat(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomBFSIter_matches_smarts(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:41668:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 41668 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:41668:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 41668 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomBFSIter_get_title(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:41724:105: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 41724 | SWIGINTERN VALUE _wrap_OBMolAtomBFSIter_get_title(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomBFSIter_has_data__SWIG_0(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:41754:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 41754 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:41754:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 41754 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomBFSIter_has_data__SWIG_1(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:41766:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 41766 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:41766:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 41766 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomBFSIter_has_data(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:41781:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 41781 | if (!_v) goto check_1; return _wrap_OBMolAtomBFSIter_has_data__SWIG_2(nargs, args, self);} check_1: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:41781:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 41781 | if (!_v) goto check_1; return _wrap_OBMolAtomBFSIter_has_data__SWIG_2(nargs, args, self);} check_1: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:41783:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 41783 | if (!_v) goto check_2; return _wrap_OBMolAtomBFSIter_has_data__SWIG_0(nargs, args, self);} check_2: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:41783:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 41783 | if (!_v) goto check_2; return _wrap_OBMolAtomBFSIter_has_data__SWIG_0(nargs, args, self);} check_2: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomBFSIter_delete_data__SWIG_3(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:41835:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 41835 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:41835:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 41835 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomBFSIter_delete_data(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:41840:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 41840 | if (!_v) goto check_1; return _wrap_OBMolAtomBFSIter_delete_data__SWIG_1(nargs, args, self);} check_1: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:41840:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 41840 | if (!_v) goto check_1; return _wrap_OBMolAtomBFSIter_delete_data__SWIG_1(nargs, args, self);} check_1: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:41845:6: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 41845 | if (!_v) goto check_3; return _wrap_OBMolAtomBFSIter_delete_data__SWIG_0(nargs, args, self);} check_3: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:41845:29: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 41845 | if (!_v) goto check_3; return _wrap_OBMolAtomBFSIter_delete_data__SWIG_0(nargs, args, self);} check_3: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomBFSIter_get_data__SWIG_1(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:41894:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 41894 | if (SWIG_IsNewObj(res2)) delete arg2; return vresult; fail: if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:41894:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 41894 | if (SWIG_IsNewObj(res2)) delete arg2; return vresult; fail: if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomBFSIter_get_data__SWIG_2(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:41906:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 41906 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return vresult; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:41906:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 41906 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return vresult; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBMolBondBFSIter(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:42028:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 42028 | if (!_v) goto check_2; return _wrap_new_OBMolBondBFSIter__SWIG_2(nargs, args, self);} check_2: if (argc == 1) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:42028:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 42028 | if (!_v) goto check_2; return _wrap_new_OBMolBondBFSIter__SWIG_2(nargs, args, self);} check_2: if (argc == 1) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolBondBFSIter_inc(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:42071:99: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 42071 | SWIGINTERN VALUE _wrap_OBMolBondBFSIter_inc(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolBondBFSIter_set_length(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:42204:106: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 42204 | SWIGINTERN VALUE _wrap_OBMolBondBFSIter_set_length(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolBondBFSIter_set_aromatic(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:42248:108: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 42248 | SWIGINTERN VALUE _wrap_OBMolBondBFSIter_set_aromatic(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolBondBFSIter_set_wedge(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:42270:105: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 42270 | SWIGINTERN VALUE _wrap_OBMolBondBFSIter_set_wedge(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolBondBFSIter_set_hash(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:42292:104: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 42292 | SWIGINTERN VALUE _wrap_OBMolBondBFSIter_set_hash(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolBondBFSIter_set_wedge_or_hash(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:42314:113: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 42314 | SWIGINTERN VALUE _wrap_OBMolBondBFSIter_set_wedge_or_hash(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolBondBFSIter_set_in_ring(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:42336:107: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 42336 | SWIGINTERN VALUE _wrap_OBMolBondBFSIter_set_in_ring(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolBondBFSIter_set_closure(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:42358:107: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 42358 | SWIGINTERN VALUE _wrap_OBMolBondBFSIter_set_closure(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolBondBFSIter_get_begin_atom(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:42430:110: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 42430 | SWIGINTERN VALUE _wrap_OBMolBondBFSIter_get_begin_atom(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolBondBFSIter_get_end_atom(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:42454:108: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 42454 | SWIGINTERN VALUE _wrap_OBMolBondBFSIter_get_end_atom(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolBondBFSIter_is_rotor(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:42552:104: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 42552 | SWIGINTERN VALUE _wrap_OBMolBondBFSIter_is_rotor(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolBondBFSIter_get_title(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:42717:105: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 42717 | SWIGINTERN VALUE _wrap_OBMolBondBFSIter_get_title(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolBondBFSIter_has_data__SWIG_0(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:42747:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 42747 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:42747:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 42747 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolBondBFSIter_has_data__SWIG_1(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:42759:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 42759 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:42759:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 42759 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolBondBFSIter_has_data(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:42774:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 42774 | if (!_v) goto check_1; return _wrap_OBMolBondBFSIter_has_data__SWIG_2(nargs, args, self);} check_1: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:42774:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 42774 | if (!_v) goto check_1; return _wrap_OBMolBondBFSIter_has_data__SWIG_2(nargs, args, self);} check_1: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:42776:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 42776 | if (!_v) goto check_2; return _wrap_OBMolBondBFSIter_has_data__SWIG_0(nargs, args, self);} check_2: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:42776:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 42776 | if (!_v) goto check_2; return _wrap_OBMolBondBFSIter_has_data__SWIG_0(nargs, args, self);} check_2: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolBondBFSIter_delete_data__SWIG_3(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:42828:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 42828 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:42828:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 42828 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolBondBFSIter_delete_data(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:42833:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 42833 | if (!_v) goto check_1; return _wrap_OBMolBondBFSIter_delete_data__SWIG_1(nargs, args, self);} check_1: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:42833:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 42833 | if (!_v) goto check_1; return _wrap_OBMolBondBFSIter_delete_data__SWIG_1(nargs, args, self);} check_1: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:42838:6: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 42838 | if (!_v) goto check_3; return _wrap_OBMolBondBFSIter_delete_data__SWIG_0(nargs, args, self);} check_3: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:42838:29: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 42838 | if (!_v) goto check_3; return _wrap_OBMolBondBFSIter_delete_data__SWIG_0(nargs, args, self);} check_3: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolBondBFSIter_get_data__SWIG_1(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:42887:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 42887 | if (SWIG_IsNewObj(res2)) delete arg2; return vresult; fail: if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:42887:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 42887 | if (SWIG_IsNewObj(res2)) delete arg2; return vresult; fail: if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolBondBFSIter_get_data__SWIG_2(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:42899:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 42899 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return vresult; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:42899:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 42899 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return vresult; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBMolBondIter(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:43008:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 43008 | if (!_v) goto check_2; return _wrap_new_OBMolBondIter__SWIG_1(nargs, args, self);} check_2: if (argc == 1) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:43008:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 43008 | if (!_v) goto check_2; return _wrap_new_OBMolBondIter__SWIG_1(nargs, args, self);} check_2: if (argc == 1) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolBondIter_inc(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:43048:96: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 43048 | SWIGINTERN VALUE _wrap_OBMolBondIter_inc(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolBondIter_set_length(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:43170:103: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 43170 | SWIGINTERN VALUE _wrap_OBMolBondIter_set_length(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolBondIter_set_aromatic(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:43213:105: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 43213 | SWIGINTERN VALUE _wrap_OBMolBondIter_set_aromatic(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolBondIter_set_wedge(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:43234:102: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 43234 | SWIGINTERN VALUE _wrap_OBMolBondIter_set_wedge(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolBondIter_set_hash(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:43255:101: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 43255 | SWIGINTERN VALUE _wrap_OBMolBondIter_set_hash(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolBondIter_set_wedge_or_hash(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:43276:110: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 43276 | SWIGINTERN VALUE _wrap_OBMolBondIter_set_wedge_or_hash(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolBondIter_set_in_ring(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:43297:104: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 43297 | SWIGINTERN VALUE _wrap_OBMolBondIter_set_in_ring(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolBondIter_set_closure(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:43318:104: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 43318 | SWIGINTERN VALUE _wrap_OBMolBondIter_set_closure(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolBondIter_get_begin_atom(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:43390:107: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 43390 | SWIGINTERN VALUE _wrap_OBMolBondIter_get_begin_atom(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolBondIter_get_end_atom(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:43414:105: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 43414 | SWIGINTERN VALUE _wrap_OBMolBondIter_get_end_atom(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolBondIter_is_rotor(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:43512:101: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 43512 | SWIGINTERN VALUE _wrap_OBMolBondIter_is_rotor(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolBondIter_get_title(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:43677:102: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 43677 | SWIGINTERN VALUE _wrap_OBMolBondIter_get_title(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolBondIter_has_data__SWIG_0(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:43707:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 43707 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:43707:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 43707 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolBondIter_has_data__SWIG_1(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:43719:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 43719 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:43719:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 43719 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolBondIter_has_data(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:43734:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 43734 | if (!_v) goto check_1; return _wrap_OBMolBondIter_has_data__SWIG_2(nargs, args, self);} check_1: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:43734:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 43734 | if (!_v) goto check_1; return _wrap_OBMolBondIter_has_data__SWIG_2(nargs, args, self);} check_1: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:43736:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 43736 | if (!_v) goto check_2; return _wrap_OBMolBondIter_has_data__SWIG_0(nargs, args, self);} check_2: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:43736:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 43736 | if (!_v) goto check_2; return _wrap_OBMolBondIter_has_data__SWIG_0(nargs, args, self);} check_2: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolBondIter_delete_data__SWIG_3(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:43788:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 43788 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:43788:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 43788 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolBondIter_delete_data(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:43793:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 43793 | if (!_v) goto check_1; return _wrap_OBMolBondIter_delete_data__SWIG_1(nargs, args, self);} check_1: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:43793:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 43793 | if (!_v) goto check_1; return _wrap_OBMolBondIter_delete_data__SWIG_1(nargs, args, self);} check_1: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:43798:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 43798 | if (!_v) goto check_3; return _wrap_OBMolBondIter_delete_data__SWIG_0(nargs, args, self);} check_3: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:43798:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 43798 | if (!_v) goto check_3; return _wrap_OBMolBondIter_delete_data__SWIG_0(nargs, args, self);} check_3: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolBondIter_get_data__SWIG_1(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:43847:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 43847 | if (SWIG_IsNewObj(res2)) delete arg2; return vresult; fail: if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:43847:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 43847 | if (SWIG_IsNewObj(res2)) delete arg2; return vresult; fail: if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolBondIter_get_data__SWIG_2(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:43859:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 43859 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return vresult; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:43859:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 43859 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return vresult; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBAtomAtomIter(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:43970:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 43970 | if (!_v) goto check_2; return _wrap_new_OBAtomAtomIter__SWIG_1(nargs, args, self);} check_2: if (argc == 1) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:43970:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 43970 | if (!_v) goto check_2; return _wrap_new_OBAtomAtomIter__SWIG_1(nargs, args, self);} check_2: if (argc == 1) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtomAtomIter_inc(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:44011:97: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 44011 | SWIGINTERN VALUE _wrap_OBAtomAtomIter_inc(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtomAtomIter_set_type__SWIG_1(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:44173:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 44173 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:44173:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 44173 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtomAtomIter_set_type(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:44177:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 44177 | if (!_v) goto check_1; return _wrap_OBAtomAtomIter_set_type__SWIG_1(nargs, args, self);} check_1: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:44177:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 44177 | if (!_v) goto check_1; return _wrap_OBAtomAtomIter_set_type__SWIG_1(nargs, args, self);} check_1: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtomAtomIter_set_vector(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:44224:104: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 44224 | SWIGINTERN VALUE _wrap_OBAtomAtomIter_set_vector(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtomAtomIter_set_aromatic(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:44277:106: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 44277 | SWIGINTERN VALUE _wrap_OBAtomAtomIter_set_aromatic(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtomAtomIter_set_in_ring(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:44298:105: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 44298 | SWIGINTERN VALUE _wrap_OBAtomAtomIter_set_in_ring(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtomAtomIter_get_vector(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:44536:104: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 44536 | SWIGINTERN VALUE _wrap_OBAtomAtomIter_get_vector(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtomAtomIter_get_distance(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:44715:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 44715 | if (!_v) goto check_2; return _wrap_OBAtomAtomIter_get_distance__SWIG_2(nargs, args, self);} check_2: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:44715:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 44715 | if (!_v) goto check_2; return _wrap_OBAtomAtomIter_get_distance__SWIG_2(nargs, args, self);} check_2: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtomAtomIter_get_angle(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:44753:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 44753 | if (!_v) goto check_1; return _wrap_OBAtomAtomIter_get_angle__SWIG_1(nargs, args, self);} check_1: if (argc == 3) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:44753:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 44753 | if (!_v) goto check_1; return _wrap_OBAtomAtomIter_get_angle__SWIG_1(nargs, args, self);} check_1: if (argc == 3) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtomAtomIter_explicit_hydrogen_count(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:44877:117: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 44877 | SWIGINTERN VALUE _wrap_OBAtomAtomIter_explicit_hydrogen_count(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtomAtomIter_has_alpha_beta_unsat(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:45175:114: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 45175 | SWIGINTERN VALUE _wrap_OBAtomAtomIter_has_alpha_beta_unsat(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtomAtomIter_matches_smarts(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:45254:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 45254 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:45254:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 45254 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtomAtomIter_get_title(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:45310:103: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 45310 | SWIGINTERN VALUE _wrap_OBAtomAtomIter_get_title(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtomAtomIter_has_data__SWIG_0(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:45340:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 45340 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:45340:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 45340 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtomAtomIter_has_data__SWIG_1(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:45352:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 45352 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:45352:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 45352 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtomAtomIter_has_data(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:45367:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 45367 | if (!_v) goto check_1; return _wrap_OBAtomAtomIter_has_data__SWIG_2(nargs, args, self);} check_1: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:45367:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 45367 | if (!_v) goto check_1; return _wrap_OBAtomAtomIter_has_data__SWIG_2(nargs, args, self);} check_1: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:45369:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 45369 | if (!_v) goto check_2; return _wrap_OBAtomAtomIter_has_data__SWIG_0(nargs, args, self);} check_2: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:45369:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 45369 | if (!_v) goto check_2; return _wrap_OBAtomAtomIter_has_data__SWIG_0(nargs, args, self);} check_2: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtomAtomIter_delete_data__SWIG_3(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:45421:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 45421 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:45421:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 45421 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtomAtomIter_delete_data(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:45426:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 45426 | if (!_v) goto check_1; return _wrap_OBAtomAtomIter_delete_data__SWIG_1(nargs, args, self);} check_1: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:45426:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 45426 | if (!_v) goto check_1; return _wrap_OBAtomAtomIter_delete_data__SWIG_1(nargs, args, self);} check_1: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:45431:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 45431 | if (!_v) goto check_3; return _wrap_OBAtomAtomIter_delete_data__SWIG_0(nargs, args, self);} check_3: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:45431:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 45431 | if (!_v) goto check_3; return _wrap_OBAtomAtomIter_delete_data__SWIG_0(nargs, args, self);} check_3: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtomAtomIter_get_data__SWIG_1(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:45480:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 45480 | if (SWIG_IsNewObj(res2)) delete arg2; return vresult; fail: if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:45480:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 45480 | if (SWIG_IsNewObj(res2)) delete arg2; return vresult; fail: if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtomAtomIter_get_data__SWIG_2(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:45492:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 45492 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return vresult; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:45492:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 45492 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return vresult; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBAtomBondIter(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:45603:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 45603 | if (!_v) goto check_2; return _wrap_new_OBAtomBondIter__SWIG_1(nargs, args, self);} check_2: if (argc == 1) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:45603:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 45603 | if (!_v) goto check_2; return _wrap_new_OBAtomBondIter__SWIG_1(nargs, args, self);} check_2: if (argc == 1) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtomBondIter_inc(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:45644:97: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 45644 | SWIGINTERN VALUE _wrap_OBAtomBondIter_inc(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtomBondIter_set_length(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:45767:104: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 45767 | SWIGINTERN VALUE _wrap_OBAtomBondIter_set_length(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtomBondIter_set_aromatic(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:45810:106: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 45810 | SWIGINTERN VALUE _wrap_OBAtomBondIter_set_aromatic(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtomBondIter_set_wedge(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:45831:103: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 45831 | SWIGINTERN VALUE _wrap_OBAtomBondIter_set_wedge(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtomBondIter_set_hash(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:45852:102: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 45852 | SWIGINTERN VALUE _wrap_OBAtomBondIter_set_hash(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtomBondIter_set_wedge_or_hash(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:45873:111: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 45873 | SWIGINTERN VALUE _wrap_OBAtomBondIter_set_wedge_or_hash(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtomBondIter_set_in_ring(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:45894:105: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 45894 | SWIGINTERN VALUE _wrap_OBAtomBondIter_set_in_ring(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtomBondIter_set_closure(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:45915:105: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 45915 | SWIGINTERN VALUE _wrap_OBAtomBondIter_set_closure(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtomBondIter_get_begin_atom(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:45987:108: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 45987 | SWIGINTERN VALUE _wrap_OBAtomBondIter_get_begin_atom(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtomBondIter_get_end_atom(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:46011:106: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 46011 | SWIGINTERN VALUE _wrap_OBAtomBondIter_get_end_atom(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtomBondIter_is_rotor(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:46109:102: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 46109 | SWIGINTERN VALUE _wrap_OBAtomBondIter_is_rotor(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtomBondIter_get_title(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:46274:103: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 46274 | SWIGINTERN VALUE _wrap_OBAtomBondIter_get_title(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtomBondIter_has_data__SWIG_0(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:46304:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 46304 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:46304:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 46304 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtomBondIter_has_data__SWIG_1(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:46316:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 46316 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:46316:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 46316 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtomBondIter_has_data(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:46331:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 46331 | if (!_v) goto check_1; return _wrap_OBAtomBondIter_has_data__SWIG_2(nargs, args, self);} check_1: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:46331:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 46331 | if (!_v) goto check_1; return _wrap_OBAtomBondIter_has_data__SWIG_2(nargs, args, self);} check_1: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:46333:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 46333 | if (!_v) goto check_2; return _wrap_OBAtomBondIter_has_data__SWIG_0(nargs, args, self);} check_2: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:46333:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 46333 | if (!_v) goto check_2; return _wrap_OBAtomBondIter_has_data__SWIG_0(nargs, args, self);} check_2: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtomBondIter_delete_data__SWIG_3(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:46385:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 46385 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:46385:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 46385 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtomBondIter_delete_data(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:46390:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 46390 | if (!_v) goto check_1; return _wrap_OBAtomBondIter_delete_data__SWIG_1(nargs, args, self);} check_1: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:46390:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 46390 | if (!_v) goto check_1; return _wrap_OBAtomBondIter_delete_data__SWIG_1(nargs, args, self);} check_1: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:46395:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 46395 | if (!_v) goto check_3; return _wrap_OBAtomBondIter_delete_data__SWIG_0(nargs, args, self);} check_3: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:46395:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 46395 | if (!_v) goto check_3; return _wrap_OBAtomBondIter_delete_data__SWIG_0(nargs, args, self);} check_3: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtomBondIter_get_data__SWIG_1(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:46444:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 46444 | if (SWIG_IsNewObj(res2)) delete arg2; return vresult; fail: if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:46444:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 46444 | if (SWIG_IsNewObj(res2)) delete arg2; return vresult; fail: if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtomBondIter_get_data__SWIG_2(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:46456:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 46456 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return vresult; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:46456:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 46456 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return vresult; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBResidueIter(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:46565:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 46565 | if (!_v) goto check_2; return _wrap_new_OBResidueIter__SWIG_1(nargs, args, self);} check_2: if (argc == 1) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:46565:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 46565 | if (!_v) goto check_2; return _wrap_new_OBResidueIter__SWIG_1(nargs, args, self);} check_2: if (argc == 1) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBResidueIter_inc(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:46605:96: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 46605 | SWIGINTERN VALUE _wrap_OBResidueIter_inc(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBResidueIter_set_name(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:46673:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 46673 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:46673:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 46673 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBResidueIter_set_num(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:46696:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 46696 | if (!_v) goto check_1; return _wrap_OBResidueIter_set_num__SWIG_0(nargs, args, self);} check_1: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:46696:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 46696 | if (!_v) goto check_1; return _wrap_OBResidueIter_set_num__SWIG_0(nargs, args, self);} check_1: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBResidueIter_get_bonds(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:46874:102: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 46874 | SWIGINTERN VALUE _wrap_OBResidueIter_get_bonds(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBResidueIter_get_title(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:47078:102: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 47078 | SWIGINTERN VALUE _wrap_OBResidueIter_get_title(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBResidueIter_has_data__SWIG_0(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:47108:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 47108 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:47108:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 47108 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBResidueIter_has_data__SWIG_1(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:47120:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 47120 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:47120:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 47120 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBResidueIter_has_data(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:47135:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 47135 | if (!_v) goto check_1; return _wrap_OBResidueIter_has_data__SWIG_2(nargs, args, self);} check_1: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:47135:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 47135 | if (!_v) goto check_1; return _wrap_OBResidueIter_has_data__SWIG_2(nargs, args, self);} check_1: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:47137:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 47137 | if (!_v) goto check_2; return _wrap_OBResidueIter_has_data__SWIG_0(nargs, args, self);} check_2: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:47137:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 47137 | if (!_v) goto check_2; return _wrap_OBResidueIter_has_data__SWIG_0(nargs, args, self);} check_2: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBResidueIter_delete_data__SWIG_3(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:47189:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 47189 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:47189:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 47189 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBResidueIter_delete_data(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:47194:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 47194 | if (!_v) goto check_1; return _wrap_OBResidueIter_delete_data__SWIG_1(nargs, args, self);} check_1: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:47194:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 47194 | if (!_v) goto check_1; return _wrap_OBResidueIter_delete_data__SWIG_1(nargs, args, self);} check_1: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:47199:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 47199 | if (!_v) goto check_3; return _wrap_OBResidueIter_delete_data__SWIG_0(nargs, args, self);} check_3: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:47199:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 47199 | if (!_v) goto check_3; return _wrap_OBResidueIter_delete_data__SWIG_0(nargs, args, self);} check_3: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBResidueIter_get_data__SWIG_1(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:47248:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 47248 | if (SWIG_IsNewObj(res2)) delete arg2; return vresult; fail: if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:47248:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 47248 | if (SWIG_IsNewObj(res2)) delete arg2; return vresult; fail: if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBResidueIter_get_data__SWIG_2(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:47260:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 47260 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return vresult; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:47260:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 47260 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return vresult; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBResidueAtomIter(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:47373:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 47373 | if (!_v) goto check_2; return _wrap_new_OBResidueAtomIter__SWIG_1(nargs, args, self);} check_2: if (argc == 1) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:47373:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 47373 | if (!_v) goto check_2; return _wrap_new_OBResidueAtomIter__SWIG_1(nargs, args, self);} check_2: if (argc == 1) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBResidueAtomIter_inc(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:47415:100: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 47415 | SWIGINTERN VALUE _wrap_OBResidueAtomIter_inc(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBResidueAtomIter_set_type__SWIG_1(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:47583:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 47583 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:47583:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 47583 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBResidueAtomIter_set_type(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:47587:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 47587 | if (!_v) goto check_1; return _wrap_OBResidueAtomIter_set_type__SWIG_1(nargs, args, self);} check_1: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:47587:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 47587 | if (!_v) goto check_1; return _wrap_OBResidueAtomIter_set_type__SWIG_1(nargs, args, self);} check_1: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBResidueAtomIter_set_vector(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:47634:107: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 47634 | SWIGINTERN VALUE _wrap_OBResidueAtomIter_set_vector(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBResidueAtomIter_set_aromatic(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:47688:109: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 47688 | SWIGINTERN VALUE _wrap_OBResidueAtomIter_set_aromatic(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBResidueAtomIter_set_in_ring(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:47710:108: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 47710 | SWIGINTERN VALUE _wrap_OBResidueAtomIter_set_in_ring(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBResidueAtomIter_get_vector(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:47948:107: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 47948 | SWIGINTERN VALUE _wrap_OBResidueAtomIter_get_vector(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBResidueAtomIter_get_distance(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:48128:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 48128 | if (!_v) goto check_2; return _wrap_OBResidueAtomIter_get_distance__SWIG_2(nargs, args, self);} check_2: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:48128:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 48128 | if (!_v) goto check_2; return _wrap_OBResidueAtomIter_get_distance__SWIG_2(nargs, args, self);} check_2: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBResidueAtomIter_get_angle(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:48166:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 48166 | if (!_v) goto check_1; return _wrap_OBResidueAtomIter_get_angle__SWIG_1(nargs, args, self);} check_1: if (argc == 3) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:48166:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 48166 | if (!_v) goto check_1; return _wrap_OBResidueAtomIter_get_angle__SWIG_1(nargs, args, self);} check_1: if (argc == 3) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBResidueAtomIter_explicit_hydrogen_count(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:48290:120: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 48290 | SWIGINTERN VALUE _wrap_OBResidueAtomIter_explicit_hydrogen_count(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBResidueAtomIter_has_alpha_beta_unsat(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:48588:117: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 48588 | SWIGINTERN VALUE _wrap_OBResidueAtomIter_has_alpha_beta_unsat(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBResidueAtomIter_matches_smarts(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:48667:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 48667 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:48667:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 48667 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBResidueAtomIter_get_title(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:48723:106: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 48723 | SWIGINTERN VALUE _wrap_OBResidueAtomIter_get_title(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBResidueAtomIter_has_data__SWIG_0(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:48753:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 48753 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:48753:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 48753 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBResidueAtomIter_has_data__SWIG_1(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:48765:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 48765 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:48765:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 48765 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBResidueAtomIter_has_data(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:48780:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 48780 | if (!_v) goto check_1; return _wrap_OBResidueAtomIter_has_data__SWIG_2(nargs, args, self);} check_1: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:48780:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 48780 | if (!_v) goto check_1; return _wrap_OBResidueAtomIter_has_data__SWIG_2(nargs, args, self);} check_1: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:48782:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 48782 | if (!_v) goto check_2; return _wrap_OBResidueAtomIter_has_data__SWIG_0(nargs, args, self);} check_2: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:48782:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 48782 | if (!_v) goto check_2; return _wrap_OBResidueAtomIter_has_data__SWIG_0(nargs, args, self);} check_2: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBResidueAtomIter_delete_data__SWIG_3(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:48834:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 48834 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:48834:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 48834 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBResidueAtomIter_delete_data(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:48839:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 48839 | if (!_v) goto check_1; return _wrap_OBResidueAtomIter_delete_data__SWIG_1(nargs, args, self);} check_1: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:48839:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 48839 | if (!_v) goto check_1; return _wrap_OBResidueAtomIter_delete_data__SWIG_1(nargs, args, self);} check_1: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:48844:6: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 48844 | if (!_v) goto check_3; return _wrap_OBResidueAtomIter_delete_data__SWIG_0(nargs, args, self);} check_3: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:48844:29: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 48844 | if (!_v) goto check_3; return _wrap_OBResidueAtomIter_delete_data__SWIG_0(nargs, args, self);} check_3: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBResidueAtomIter_get_data__SWIG_1(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:48893:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 48893 | if (SWIG_IsNewObj(res2)) delete arg2; return vresult; fail: if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:48893:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 48893 | if (SWIG_IsNewObj(res2)) delete arg2; return vresult; fail: if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBResidueAtomIter_get_data__SWIG_2(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:48905:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 48905 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return vresult; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:48905:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 48905 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return vresult; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBMolAngleIter(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:49016:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 49016 | if (!_v) goto check_2; return _wrap_new_OBMolAngleIter__SWIG_1(nargs, args, self);} check_2: if (argc == 1) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:49016:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 49016 | if (!_v) goto check_2; return _wrap_new_OBMolAngleIter__SWIG_1(nargs, args, self);} check_2: if (argc == 1) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBMolTorsionIter(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:49095:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 49095 | if (!_v) goto check_2; return _wrap_new_OBMolTorsionIter__SWIG_1(nargs, args, self);} check_2: if (argc == 1) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:49095:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 49095 | if (!_v) goto check_2; return _wrap_new_OBMolTorsionIter__SWIG_1(nargs, args, self);} check_2: if (argc == 1) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBMolPairIter(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:49172:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 49172 | if (!_v) goto check_2; return _wrap_new_OBMolPairIter__SWIG_1(nargs, args, self);} check_2: if (argc == 1) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:49172:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 49172 | if (!_v) goto check_2; return _wrap_new_OBMolPairIter__SWIG_1(nargs, args, self);} check_2: if (argc == 1) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBMolRingIter(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:49247:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 49247 | if (!_v) goto check_2; return _wrap_new_OBMolRingIter__SWIG_1(nargs, args, self);} check_2: if (argc == 1) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:49247:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 49247 | if (!_v) goto check_2; return _wrap_new_OBMolRingIter__SWIG_1(nargs, args, self);} check_2: if (argc == 1) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolRingIter_inc(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:49287:96: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 49287 | SWIGINTERN VALUE _wrap_OBMolRingIter_inc(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolRingIter__path_set(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:49343:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 49343 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:49343:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 49343 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolRingIter_set_type__SWIG_0(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:49409:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 49409 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:49409:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 49409 | if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolRingIter_set_type(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:49426:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 49426 | if (!_v) goto check_1; return _wrap_OBMolRingIter_set_type__SWIG_1(nargs, args, self);} check_1: if (argc == 2) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:49426:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 49426 | if (!_v) goto check_1; return _wrap_OBMolRingIter_set_type__SWIG_1(nargs, args, self);} check_1: if (argc == 2) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBChargeModel__SWIG_0(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:49546:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 49546 | if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:49546:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 49546 | if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBChargeModel__SWIG_1(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:49565:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 49565 | if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return self; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:49565:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 49565 | if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return self; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBChargeModel(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:49566:96: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 49566 | SWIGINTERN VALUE _wrap_new_OBChargeModel(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; argc = nargs; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBChargeModel_find_type(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:49580:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 49580 | if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return vresult; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:49580:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 49580 | if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return vresult; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBChargeModel_compute_charges__SWIG_1(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:49611:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 49611 | if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:49611:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 49611 | if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBChargeModel_compute_charges(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:49612:108: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 49612 | SWIGINTERN VALUE _wrap_OBChargeModel_compute_charges(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBPhModel_correct_for_ph(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:49787:103: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 49787 | SWIGINTERN VALUE _wrap_OBPhModel_correct_for_ph(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBGraphSym(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:49826:93: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 49826 | SWIGINTERN VALUE _wrap_new_OBGraphSym(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; argc = nargs; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBIsomorphismMapper_get_instance__SWIG_0(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:49884:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 49884 | if (SWIG_IsNewObj(res2)) delete arg2; return vresult; fail: if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:49884:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 49884 | if (SWIG_IsNewObj(res2)) delete arg2; return vresult; fail: if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBIsomorphismMapper_get_instance(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:49895:111: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 49895 | SWIGINTERN VALUE _wrap_OBIsomorphismMapper_get_instance(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBIsomorphismMapper_map_first(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:49944:108: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 49944 | SWIGINTERN VALUE _wrap_OBIsomorphismMapper_map_first(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBIsomorphismMapper_map_unique(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:49994:109: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 49994 | SWIGINTERN VALUE _wrap_OBIsomorphismMapper_map_unique(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBIsomorphismMapper_map_all(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:50071:106: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 50071 | SWIGINTERN VALUE _wrap_OBIsomorphismMapper_map_all(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[6]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBIsomorphismMapper_map_generic(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:50121:110: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 50121 | SWIGINTERN VALUE _wrap_OBIsomorphismMapper_map_generic(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_find_automorphisms__SWIG_0(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:50192:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 50192 | if (SWIG_IsNewObj(res3)) delete arg3; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:50192:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 50192 | if (SWIG_IsNewObj(res3)) delete arg3; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_find_automorphisms__SWIG_1(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:50223:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 50223 | if (SWIG_IsNewObj(res3)) delete arg3; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:50223:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 50223 | if (SWIG_IsNewObj(res3)) delete arg3; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_find_automorphisms__SWIG_2(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:50249:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 50249 | if (SWIG_IsNewObj(res3)) delete arg3; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:50249:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 50249 | if (SWIG_IsNewObj(res3)) delete arg3; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_find_automorphisms__SWIG_6(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:50340:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 50340 | if (SWIG_IsNewObj(res3)) delete arg3; return Qnil; fail: if (SWIG_IsNewObj(res3)) delete arg3; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:50340:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 50340 | if (SWIG_IsNewObj(res3)) delete arg3; return Qnil; fail: if (SWIG_IsNewObj(res3)) delete arg3; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_find_automorphisms__SWIG_7(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:50361:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 50361 | if (SWIG_IsNewObj(res3)) delete arg3; return Qnil; fail: if (SWIG_IsNewObj(res3)) delete arg3; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:50361:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 50361 | if (SWIG_IsNewObj(res3)) delete arg3; return Qnil; fail: if (SWIG_IsNewObj(res3)) delete arg3; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_find_automorphisms(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:50366:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 50366 | if (!_v) goto check_2; { void *vptr = 0; | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:50366:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 50366 | if (!_v) goto check_2; { void *vptr = 0; | ^ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:50377:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 50377 | if (!_v) goto check_5; { void *vptr = 0; | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:50377:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 50377 | if (!_v) goto check_5; { void *vptr = 0; | ^ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:50387:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 50387 | if (!_v) goto check_6; return _wrap_find_automorphisms__SWIG_6(nargs, args, self);} check_6: if (argc == 4) { | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:50387:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 50387 | if (!_v) goto check_6; return _wrap_find_automorphisms__SWIG_6(nargs, args, self);} check_6: if (argc == 4) { | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBQueryAtom(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:50443:94: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 50443 | SWIGINTERN VALUE _wrap_new_OBQueryAtom(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; argc = nargs; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBQueryBond(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:50555:94: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 50555 | SWIGINTERN VALUE _wrap_new_OBQueryBond(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; argc = nargs; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_compile_molecule_query(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:50729:101: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 50729 | SWIGINTERN VALUE _wrap_compile_molecule_query(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_compile_smiles_query__SWIG_0(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:50751:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 50751 | if (SWIG_IsNewObj(res1)) delete arg1; return vresult; fail: if (SWIG_IsNewObj(res1)) delete arg1; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:50751:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 50751 | if (SWIG_IsNewObj(res1)) delete arg1; return vresult; fail: if (SWIG_IsNewObj(res1)) delete arg1; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_compile_smiles_query__SWIG_1(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:50761:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 50761 | if (SWIG_IsNewObj(res1)) delete arg1; return vresult; fail: if (SWIG_IsNewObj(res1)) delete arg1; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:50761:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 50761 | if (SWIG_IsNewObj(res1)) delete arg1; return vresult; fail: if (SWIG_IsNewObj(res1)) delete arg1; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_compile_smiles_query(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:50762:99: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 50762 | SWIGINTERN VALUE _wrap_compile_smiles_query(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; argc = nargs; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_canonical_labels__SWIG_0(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:50800:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 50800 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; fail: if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:50800:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 50800 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; fail: if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_canonical_labels__SWIG_1(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:50830:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 50830 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; fail: if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:50830:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 50830 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; fail: if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_canonical_labels__SWIG_2(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:50857:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 50857 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; fail: if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:50857:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 50857 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; fail: if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_canonical_labels__SWIG_3(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:50879:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 50879 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; fail: if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:50879:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 50879 | if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; fail: if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_canonical_labels(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:50880:95: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 50880 | SWIGINTERN VALUE _wrap_canonical_labels(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[6]; int ii; argc = nargs; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_OBStereo_make_refs(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:50929:97: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 50929 | SWIGINTERN VALUE _wrap_OBStereo_make_refs(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; argc = nargs; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBStereoUnit(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:51073:95: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 51073 | SWIGINTERN VALUE _wrap_new_OBStereoUnit(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; argc = nargs; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBStereoFacade(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:51214:97: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 51214 | SWIGINTERN VALUE _wrap_new_OBStereoFacade(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; argc = nargs; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_perceive_stereo(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:51363:94: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 51363 | SWIGINTERN VALUE _wrap_perceive_stereo(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; argc = nargs; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_stereo_from_2d(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:51405:93: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 51405 | SWIGINTERN VALUE _wrap_stereo_from_2d(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; argc = nargs; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_stereo_from_3d(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:51427:93: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 51427 | SWIGINTERN VALUE _wrap_stereo_from_3d(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; argc = nargs; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_tetrahedral_from_3d(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:51478:98: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 51478 | SWIGINTERN VALUE _wrap_tetrahedral_from_3d(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; argc = nargs; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_tetrahedral_from_2d(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:51525:98: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 51525 | SWIGINTERN VALUE _wrap_tetrahedral_from_2d(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; argc = nargs; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_tetrahedral_from_0d(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:51572:98: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 51572 | SWIGINTERN VALUE _wrap_tetrahedral_from_0d(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; argc = nargs; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_cis_trans_from_3d(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:51619:96: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 51619 | SWIGINTERN VALUE _wrap_cis_trans_from_3d(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; argc = nargs; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_cis_trans_from_2d(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:51697:96: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 51697 | SWIGINTERN VALUE _wrap_cis_trans_from_2d(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; argc = nargs; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_cis_trans_from_0d(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:51811:96: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 51811 | SWIGINTERN VALUE _wrap_cis_trans_from_0d(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; argc = nargs; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_find_stereogenic_units__SWIG_0(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:51836:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 51836 | if (SWIG_IsNewObj(res2)) delete arg2; return vresult; fail: if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:51836:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 51836 | if (SWIG_IsNewObj(res2)) delete arg2; return vresult; fail: if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_find_stereogenic_units__SWIG_1(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:51860:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 51860 | if (SWIG_IsNewObj(res2)) delete arg2; return vresult; fail: if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:51860:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 51860 | if (SWIG_IsNewObj(res2)) delete arg2; return vresult; fail: if (SWIG_IsNewObj(res2)) delete arg2; return Qnil; } | ^~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_find_stereogenic_units(int, VALUE*, VALUE)': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:51861:101: warning: variable 'argv' set but not used [-Wunused-but-set-variable] 51861 | SWIGINTERN VALUE _wrap_find_stereogenic_units(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; | ^~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In instantiation of 'Sequence* swig::getslice(const Sequence*, Difference, Difference) [with Sequence = std::vector; Difference = long int]': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:4484:94: required from here /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:3357:69: warning: comparison of integer expressions of different signedness: 'long int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3357 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); | ~~^~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:3357:82: warning: comparison of integer expressions of different signedness: 'long int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3357 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); | ~~^~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In instantiation of 'Sequence* swig::getslice(const Sequence*, Difference, Difference) [with Sequence = std::vector; Difference = int]': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:4606:98: required from here /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:3357:69: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3357 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); | ~~^~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:3357:82: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3357 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); | ~~^~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In instantiation of 'Sequence* swig::getslice(const Sequence*, Difference, Difference) [with Sequence = std::vector; Difference = long int]': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:4845:112: required from here /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:3357:69: warning: comparison of integer expressions of different signedness: 'long int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3357 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); | ~~^~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:3357:82: warning: comparison of integer expressions of different signedness: 'long int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3357 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); | ~~^~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In instantiation of 'Sequence* swig::getslice(const Sequence*, Difference, Difference) [with Sequence = std::vector; Difference = int]': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:4967:116: required from here /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:3357:69: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3357 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); | ~~^~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:3357:82: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3357 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); | ~~^~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In instantiation of 'Sequence* swig::getslice(const Sequence*, Difference, Difference) [with Sequence = std::vector >; Difference = long int]': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:5156:168: required from here /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:3357:69: warning: comparison of integer expressions of different signedness: 'long int' and 'std::vector >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3357 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); | ~~^~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:3357:82: warning: comparison of integer expressions of different signedness: 'long int' and 'std::vector >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3357 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); | ~~^~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In instantiation of 'Sequence* swig::getslice(const Sequence*, Difference, Difference) [with Sequence = std::vector >; Difference = int]': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:5278:172: required from here /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:3357:69: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3357 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); | ~~^~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:3357:82: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3357 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); | ~~^~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In instantiation of 'Sequence* swig::getslice(const Sequence*, Difference, Difference) [with Sequence = std::vector; Difference = long int]': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:5482:100: required from here /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:3357:69: warning: comparison of integer expressions of different signedness: 'long int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3357 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); | ~~^~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:3357:82: warning: comparison of integer expressions of different signedness: 'long int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3357 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); | ~~^~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In instantiation of 'Sequence* swig::getslice(const Sequence*, Difference, Difference) [with Sequence = std::vector; Difference = int]': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:5604:104: required from here /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:3357:69: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3357 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); | ~~^~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:3357:82: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3357 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); | ~~^~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In instantiation of 'Sequence* swig::getslice(const Sequence*, Difference, Difference) [with Sequence = std::vector >; Difference = long int]': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:5933:110: required from here /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:3357:69: warning: comparison of integer expressions of different signedness: 'long int' and 'std::vector >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3357 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); | ~~^~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:3357:82: warning: comparison of integer expressions of different signedness: 'long int' and 'std::vector >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3357 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); | ~~^~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In instantiation of 'Sequence* swig::getslice(const Sequence*, Difference, Difference) [with Sequence = std::vector >; Difference = int]': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:6055:114: required from here /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:3357:69: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3357 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); | ~~^~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:3357:82: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3357 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); | ~~^~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In instantiation of 'Sequence* swig::getslice(const Sequence*, Difference, Difference) [with Sequence = std::vector; Difference = long int]': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:6252:124: required from here /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:3357:69: warning: comparison of integer expressions of different signedness: 'long int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3357 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); | ~~^~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:3357:82: warning: comparison of integer expressions of different signedness: 'long int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3357 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); | ~~^~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In instantiation of 'Sequence* swig::getslice(const Sequence*, Difference, Difference) [with Sequence = std::vector; Difference = int]': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:6374:128: required from here /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:3357:69: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3357 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); | ~~^~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:3357:82: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3357 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); | ~~^~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In instantiation of 'Sequence* swig::getslice(const Sequence*, Difference, Difference) [with Sequence = std::vector; Difference = long int]': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:6533:120: required from here /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:3357:69: warning: comparison of integer expressions of different signedness: 'long int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3357 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); | ~~^~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:3357:82: warning: comparison of integer expressions of different signedness: 'long int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3357 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); | ~~^~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In instantiation of 'Sequence* swig::getslice(const Sequence*, Difference, Difference) [with Sequence = std::vector; Difference = int]': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:6655:124: required from here /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:3357:69: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3357 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); | ~~^~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:3357:82: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3357 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); | ~~^~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In instantiation of 'Sequence* swig::getslice(const Sequence*, Difference, Difference) [with Sequence = std::vector >; Difference = long int]': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:6814:122: required from here /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:3357:69: warning: comparison of integer expressions of different signedness: 'long int' and 'std::vector >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3357 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); | ~~^~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:3357:82: warning: comparison of integer expressions of different signedness: 'long int' and 'std::vector >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3357 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); | ~~^~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In instantiation of 'Sequence* swig::getslice(const Sequence*, Difference, Difference) [with Sequence = std::vector >; Difference = int]': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:6936:126: required from here /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:3357:69: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3357 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); | ~~^~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:3357:82: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3357 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); | ~~^~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In instantiation of 'Sequence* swig::getslice(const Sequence*, Difference, Difference) [with Sequence = std::vector >; Difference = long int]': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:7095:128: required from here /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:3357:69: warning: comparison of integer expressions of different signedness: 'long int' and 'std::vector >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3357 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); | ~~^~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:3357:82: warning: comparison of integer expressions of different signedness: 'long int' and 'std::vector >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3357 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); | ~~^~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In instantiation of 'Sequence* swig::getslice(const Sequence*, Difference, Difference) [with Sequence = std::vector >; Difference = int]': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:7217:132: required from here /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:3357:69: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3357 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); | ~~^~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:3357:82: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3357 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); | ~~^~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In instantiation of 'Sequence* swig::getslice(const Sequence*, Difference, Difference) [with Sequence = std::vector >; Difference = long int]': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:7376:122: required from here /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:3357:69: warning: comparison of integer expressions of different signedness: 'long int' and 'std::vector >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3357 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); | ~~^~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:3357:82: warning: comparison of integer expressions of different signedness: 'long int' and 'std::vector >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3357 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); | ~~^~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In instantiation of 'Sequence* swig::getslice(const Sequence*, Difference, Difference) [with Sequence = std::vector >; Difference = int]': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:7498:126: required from here /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:3357:69: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3357 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); | ~~^~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:3357:82: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3357 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); | ~~^~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In instantiation of 'Sequence* swig::getslice(const Sequence*, Difference, Difference) [with Sequence = std::vector; Difference = long int]': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:7649:125: required from here /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:3357:69: warning: comparison of integer expressions of different signedness: 'long int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3357 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); | ~~^~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:3357:82: warning: comparison of integer expressions of different signedness: 'long int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3357 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); | ~~^~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In instantiation of 'Sequence* swig::getslice(const Sequence*, Difference, Difference) [with Sequence = std::vector; Difference = int]': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:7771:129: required from here /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:3357:69: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3357 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); | ~~^~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:3357:82: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3357 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); | ~~^~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp: In instantiation of 'Sequence* swig::getslice(const Sequence*, Difference, Difference) [with Sequence = std::vector; Difference = long int]': /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:7930:139: required from here /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:3357:69: warning: comparison of integer expressions of different signedness: 'long int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3357 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); | ~~^~~~~~~ /builddir/build/BUILD/openbabel-9c001b5aeb8b985f26d111d811673150607662fa/scripts/ruby/openbabel-ruby.cpp:3357:82: warning: comparison of integer expressions of different signedness: 'long int' and 'std::vector