INFO buildroot.py:345: Mock Version: 1.4.2 DEBUG util.py:122: touching file: /var/lib/mock/579095-fedora-rawhide-x86_64/root/etc/fstab DEBUG util.py:122: touching file: /var/lib/mock/579095-fedora-rawhide-x86_64/root/etc/yum/yum.conf DEBUG util.py:122: touching file: /var/lib/mock/579095-fedora-rawhide-x86_64/root/etc/dnf.conf DEBUG util.py:122: touching file: /var/lib/mock/579095-fedora-rawhide-x86_64/root/var/log/yum.log DEBUG buildroot.py:140: rootdir = /var/lib/mock/579095-fedora-rawhide-x86_64/root DEBUG buildroot.py:141: resultdir = /var/lib/copr-rpmbuild/results DEBUG util.py:109: ensuring that dir exists: /var/lib/mock/579095-fedora-rawhide-x86_64/root/etc/pki/mock DEBUG util.py:109: ensuring that dir exists: /var/lib/mock/579095-fedora-rawhide-x86_64/root/etc/dnf DEBUG util.py:606: child environment: None DEBUG util.py:533: Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', 'de7205d9aab64676acab83329074395b', '-D', '/var/lib/mock/579095-fedora-rawhide-x86_64/root', '-a', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=en_US.UTF-8', '--setenv=LD_PRELOAD=/var/tmp/tmp.mock.mx_j1bch/$LIB/nosync.so', '/usr/sbin/userdel', '-f', 'mockbuild'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8', 'LD_PRELOAD': '/var/tmp/tmp.mock.mx_j1bch/$LIB/nosync.so'} and shell False DEBUG util.py:307: Unsharing. Flags: 134217728 DEBUG util.py:588: Child return code was: 0 DEBUG util.py:606: child environment: None DEBUG util.py:533: Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', 'b8ed64e3bba14dd5ac65c5d9a30f8db0', '-D', '/var/lib/mock/579095-fedora-rawhide-x86_64/root', '-a', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=en_US.UTF-8', '--setenv=LD_PRELOAD=/var/tmp/tmp.mock.mx_j1bch/$LIB/nosync.so', '/usr/sbin/groupdel', 'mockbuild'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8', 'LD_PRELOAD': '/var/tmp/tmp.mock.mx_j1bch/$LIB/nosync.so'} and shell False DEBUG util.py:307: Unsharing. Flags: 134217728 DEBUG util.py:450: groupdel: group 'mockbuild' does not exist DEBUG util.py:588: Child return code was: 6 DEBUG util.py:606: child environment: None DEBUG util.py:533: Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '46ce9f03da68462ba5ed624e6c4f3a7a', '-D', '/var/lib/mock/579095-fedora-rawhide-x86_64/root', '-a', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=en_US.UTF-8', '--setenv=LD_PRELOAD=/var/tmp/tmp.mock.mx_j1bch/$LIB/nosync.so', '/usr/sbin/groupadd', '-g', '135', 'mockbuild'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8', 'LD_PRELOAD': '/var/tmp/tmp.mock.mx_j1bch/$LIB/nosync.so'} and shell False DEBUG util.py:307: Unsharing. Flags: 134217728 DEBUG util.py:588: Child return code was: 0 DEBUG util.py:606: child environment: None DEBUG util.py:533: Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '1a5ad4f26fb34ea3b4ec6c960a662829', '-D', '/var/lib/mock/579095-fedora-rawhide-x86_64/root', '-a', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=en_US.UTF-8', '--setenv=LD_PRELOAD=/var/tmp/tmp.mock.mx_j1bch/$LIB/nosync.so', '/usr/sbin/useradd', '-o', '-m', '-u', '1001', '-g', '135', '-d', '/builddir', '-n', 'mockbuild'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8', 'LD_PRELOAD': '/var/tmp/tmp.mock.mx_j1bch/$LIB/nosync.so'} and shell False DEBUG util.py:307: Unsharing. Flags: 134217728 DEBUG util.py:450: useradd: warning: the home directory already exists. DEBUG util.py:450: Not copying any file from skel directory into it. DEBUG util.py:450: Creating mailbox file: File exists DEBUG util.py:588: Child return code was: 0 DEBUG util.py:109: ensuring that dir exists: /var/lib/mock/579095-fedora-rawhide-x86_64/root/builddir/build/RPMS DEBUG util.py:112: creating dir: /var/lib/mock/579095-fedora-rawhide-x86_64/root/builddir/build/RPMS DEBUG util.py:109: ensuring that dir exists: /var/lib/mock/579095-fedora-rawhide-x86_64/root/builddir/build/SPECS DEBUG util.py:112: creating dir: /var/lib/mock/579095-fedora-rawhide-x86_64/root/builddir/build/SPECS DEBUG util.py:109: ensuring that dir exists: /var/lib/mock/579095-fedora-rawhide-x86_64/root/builddir/build/SRPMS DEBUG util.py:112: creating dir: /var/lib/mock/579095-fedora-rawhide-x86_64/root/builddir/build/SRPMS DEBUG util.py:109: ensuring that dir exists: /var/lib/mock/579095-fedora-rawhide-x86_64/root/builddir/build/SOURCES DEBUG util.py:109: ensuring that dir exists: /var/lib/mock/579095-fedora-rawhide-x86_64/root/builddir/build/BUILD DEBUG util.py:112: creating dir: /var/lib/mock/579095-fedora-rawhide-x86_64/root/builddir/build/BUILD DEBUG util.py:109: ensuring that dir exists: /var/lib/mock/579095-fedora-rawhide-x86_64/root/builddir/build/BUILDROOT DEBUG util.py:112: creating dir: /var/lib/mock/579095-fedora-rawhide-x86_64/root/builddir/build/BUILDROOT DEBUG util.py:109: ensuring that dir exists: /var/lib/mock/579095-fedora-rawhide-x86_64/root/builddir/build/originals DEBUG util.py:112: creating dir: /var/lib/mock/579095-fedora-rawhide-x86_64/root/builddir/build/originals DEBUG util.py:122: touching file: /var/lib/mock/579095-fedora-rawhide-x86_64/root/.initialized DEBUG util.py:606: child environment: None DEBUG util.py:533: Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', 'b0677f057d124a8586c822a968c3715b', '-D', '/var/lib/mock/579095-fedora-rawhide-x86_64/root', '-a', '--private-network', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=en_US.UTF-8', '-u', 'mockbuild', '/bin/rpm', '-Uvh', '--nodeps', '/builddir/build/originals/mmseq-1.0.8a-19.fc27.src.rpm'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'} and shell False DEBUG util.py:307: Unsharing. Flags: 134217728 DEBUG util.py:450: Updating / installing... DEBUG util.py:450: mmseq-1.0.8a-19.fc27 ######################################## DEBUG util.py:588: Child return code was: 0 DEBUG util.py:606: child environment: None DEBUG util.py:533: Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '88a5c4e55fab48e1ab6b3c3e449542db', '-D', '/var/lib/mock/579095-fedora-rawhide-x86_64/root', '-a', '--private-network', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=en_US.UTF-8', '-u', 'mockbuild', '/bin/rpm', '-qpl', '/builddir/build/originals/mmseq-1.0.8a-19.fc27.src.rpm'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'} and shell False DEBUG util.py:307: Unsharing. Flags: 134217728 DEBUG util.py:450: 1.0.8a.zip DEBUG util.py:450: mmseq-iostream-c++11.patch DEBUG util.py:450: mmseq-sam-header.patch DEBUG util.py:450: mmseq-static-data-members-initialization-c++11.patch DEBUG util.py:450: mmseq-zlib.patch DEBUG util.py:450: mmseq.spec DEBUG util.py:588: Child return code was: 0 DEBUG util.py:606: child environment: None DEBUG util.py:307: Unsharing. Flags: 134217728 DEBUG package_manager.py:107: ['/usr/bin/dnf', 'builddep', '--installroot', '/var/lib/mock/579095-fedora-rawhide-x86_64/root/', '--releasever', '27', '/var/lib/mock/579095-fedora-rawhide-x86_64/root//builddir/build/SRPMS/mmseq-1.0.8a-19.fc27.src.rpm'] DEBUG util.py:606: child environment: None DEBUG util.py:533: Executing command: ['/usr/bin/dnf', 'builddep', '--installroot', '/var/lib/mock/579095-fedora-rawhide-x86_64/root/', '--releasever', '27', '/var/lib/mock/579095-fedora-rawhide-x86_64/root//builddir/build/SRPMS/mmseq-1.0.8a-19.fc27.src.rpm'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8', 'LC_MESSAGES': 'C.UTF-8', 'LD_PRELOAD': '/var/tmp/tmp.mock.mx_j1bch/$LIB/nosync.so'} and shell False DEBUG util.py:450: "Copr repository" 3.0 MB/s | 158 kB 00:00 DEBUG util.py:450: fedora 41 MB/s | 56 MB 00:01 DEBUG util.py:450: Last metadata expiration check: 0:00:00 ago on Thu 13 Jul 2017 09:09:30 PM UTC. DEBUG util.py:450: Dependencies resolved. DEBUG util.py:450: ================================================================================ DEBUG util.py:450: Package Arch Version Repository Size DEBUG util.py:450: ================================================================================ DEBUG util.py:450: Installing: DEBUG util.py:450: armadillo-devel x86_64 7.900.1-1.fc27 fedora 1.2 M DEBUG util.py:450: boost-devel x86_64 1.63.0-9.fc27 fedora 9.2 M DEBUG util.py:450: gsl-devel x86_64 2.4-1.fc27 copr_base 563 k DEBUG util.py:450: perl-generators noarch 1.10-4.fc27 fedora 16 k DEBUG util.py:450: samtools-devel x86_64 0.1.19-10.fc26 fedora 36 k DEBUG util.py:450: zlib-devel x86_64 1.2.11-2.fc26 fedora 56 k DEBUG util.py:450: Installing dependencies: DEBUG util.py:450: SuperLU x86_64 5.2.0-2.fc26 fedora 189 k DEBUG util.py:450: SuperLU-devel x86_64 5.2.0-2.fc26 fedora 27 k DEBUG util.py:450: armadillo x86_64 7.900.1-1.fc27 fedora 28 k DEBUG util.py:450: arpack x86_64 3.5.0-2.fc27 fedora 190 k DEBUG util.py:450: arpack-devel x86_64 3.5.0-2.fc27 fedora 11 k DEBUG util.py:450: atlas x86_64 3.10.2-16.fc26 fedora 6.2 M DEBUG util.py:450: autoconf noarch 2.69-24.fc26 fedora 709 k DEBUG util.py:450: automake noarch 1.15-9.fc26 fedora 695 k DEBUG util.py:450: blas x86_64 3.6.1-4.fc26 fedora 394 k DEBUG util.py:450: blas-devel x86_64 3.6.1-4.fc26 fedora 17 k DEBUG util.py:450: boost x86_64 1.63.0-9.fc27 fedora 47 k DEBUG util.py:450: boost-atomic x86_64 1.63.0-9.fc27 fedora 49 k DEBUG util.py:450: boost-chrono x86_64 1.63.0-9.fc27 fedora 52 k DEBUG util.py:450: boost-container x86_64 1.63.0-9.fc27 fedora 78 k DEBUG util.py:450: boost-context x86_64 1.63.0-9.fc27 fedora 51 k DEBUG util.py:450: boost-coroutine x86_64 1.63.0-9.fc27 fedora 63 k DEBUG util.py:450: boost-date-time x86_64 1.63.0-9.fc27 fedora 62 k DEBUG util.py:450: boost-fiber x86_64 1.63.0-9.fc27 fedora 74 k DEBUG util.py:450: boost-filesystem x86_64 1.63.0-9.fc27 fedora 78 k DEBUG util.py:450: boost-graph x86_64 1.63.0-9.fc27 fedora 142 k DEBUG util.py:450: boost-iostreams x86_64 1.63.0-9.fc27 fedora 73 k DEBUG util.py:450: boost-locale x86_64 1.63.0-9.fc27 fedora 280 k DEBUG util.py:450: boost-log x86_64 1.63.0-9.fc27 fedora 459 k DEBUG util.py:450: boost-math x86_64 1.63.0-9.fc27 fedora 298 k DEBUG util.py:450: boost-numpy x86_64 1.63.0-9.fc27 fedora 60 k DEBUG util.py:450: boost-program-options x86_64 1.63.0-9.fc27 fedora 171 k DEBUG util.py:450: boost-python x86_64 1.63.0-9.fc27 fedora 127 k DEBUG util.py:450: boost-random x86_64 1.63.0-9.fc27 fedora 55 k DEBUG util.py:450: boost-regex x86_64 1.63.0-9.fc27 fedora 298 k DEBUG util.py:450: boost-serialization x86_64 1.63.0-9.fc27 fedora 156 k DEBUG util.py:450: boost-signals x86_64 1.63.0-9.fc27 fedora 73 k DEBUG util.py:450: boost-system x86_64 1.63.0-9.fc27 fedora 52 k DEBUG util.py:450: boost-test x86_64 1.63.0-9.fc27 fedora 268 k DEBUG util.py:450: boost-thread x86_64 1.63.0-9.fc27 fedora 91 k DEBUG util.py:450: boost-timer x86_64 1.63.0-9.fc27 fedora 54 k DEBUG util.py:450: boost-type_erasure x86_64 1.63.0-9.fc27 fedora 63 k DEBUG util.py:450: boost-wave x86_64 1.63.0-9.fc27 fedora 224 k DEBUG util.py:450: emacs-filesystem noarch 1:25.2-2.fc27 fedora 66 k DEBUG util.py:450: gcc-gfortran x86_64 7.1.1-5.fc27 fedora 10 M DEBUG util.py:450: groff-base x86_64 1.22.3-9.fc26 fedora 1.0 M DEBUG util.py:450: gsl x86_64 2.4-1.fc27 copr_base 998 k DEBUG util.py:450: hdf5 x86_64 1.8.18-5.fc26 fedora 1.7 M DEBUG util.py:450: hdf5-devel x86_64 1.8.18-5.fc26 fedora 923 k DEBUG util.py:450: lapack x86_64 3.6.1-4.fc26 fedora 6.0 M DEBUG util.py:450: lapack-devel x86_64 3.6.1-4.fc26 fedora 80 k DEBUG util.py:450: libgfortran x86_64 7.1.1-5.fc27 fedora 532 k DEBUG util.py:450: libicu x86_64 57.1-4.fc26 fedora 8.4 M DEBUG util.py:450: libicu-devel x86_64 57.1-4.fc26 fedora 914 k DEBUG util.py:450: libquadmath x86_64 7.1.1-5.fc27 fedora 179 k DEBUG util.py:450: libquadmath-devel x86_64 7.1.1-5.fc27 fedora 35 k DEBUG util.py:450: m4 x86_64 1.4.18-3.fc26 fedora 217 k DEBUG util.py:450: openblas x86_64 0.2.19-11.fc27 fedora 4.1 M DEBUG util.py:450: openblas-devel x86_64 0.2.19-11.fc27 fedora 83 k DEBUG util.py:450: openblas-openmp x86_64 0.2.19-11.fc27 fedora 4.2 M DEBUG util.py:450: openblas-openmp64 x86_64 0.2.19-11.fc27 fedora 4.1 M DEBUG util.py:450: openblas-openmp64_ x86_64 0.2.19-11.fc27 fedora 4.1 M DEBUG util.py:450: openblas-serial64 x86_64 0.2.19-11.fc27 fedora 4.0 M DEBUG util.py:450: openblas-serial64_ x86_64 0.2.19-11.fc27 fedora 4.0 M DEBUG util.py:450: openblas-threads x86_64 0.2.19-11.fc27 fedora 4.2 M DEBUG util.py:450: openblas-threads64 x86_64 0.2.19-11.fc27 fedora 4.1 M DEBUG util.py:450: openblas-threads64_ x86_64 0.2.19-11.fc27 fedora 4.1 M DEBUG util.py:450: perl x86_64 4:5.26.0-394.fc27 fedora 6.2 M DEBUG util.py:450: perl-Carp noarch 1.42-393.fc27 fedora 28 k DEBUG util.py:450: perl-Data-Dumper x86_64 2.167-394.fc27 fedora 55 k DEBUG util.py:450: perl-Encode x86_64 4:2.91-11.fc27 fedora 1.5 M DEBUG util.py:450: perl-Errno x86_64 1.28-394.fc27 fedora 69 k DEBUG util.py:450: perl-Exporter noarch 5.72-394.fc27 fedora 32 k DEBUG util.py:450: perl-Fedora-VSP noarch 0.001-7.fc27 fedora 23 k DEBUG util.py:450: perl-File-Path noarch 2.14-1.fc27 fedora 36 k DEBUG util.py:450: perl-File-Temp noarch 0.230.400-393.fc27 fedora 61 k DEBUG util.py:450: perl-Getopt-Long noarch 1:2.50-2.fc27 fedora 61 k DEBUG util.py:450: perl-HTTP-Tiny noarch 0.070-393.fc27 fedora 56 k DEBUG util.py:450: perl-IO x86_64 1.38-394.fc27 fedora 134 k DEBUG util.py:450: perl-MIME-Base64 x86_64 3.15-393.fc27 fedora 28 k DEBUG util.py:450: perl-PathTools x86_64 3.67-393.fc27 fedora 88 k DEBUG util.py:450: perl-Pod-Escapes noarch 1:1.07-393.fc27 fedora 19 k DEBUG util.py:450: perl-Pod-Perldoc noarch 3.28-394.fc27 fedora 87 k DEBUG util.py:450: perl-Pod-Simple noarch 1:3.35-393.fc27 fedora 211 k DEBUG util.py:450: perl-Pod-Usage noarch 4:1.69-393.fc27 fedora 33 k DEBUG util.py:450: perl-Scalar-List-Utils x86_64 3:1.48-1.fc27 fedora 65 k DEBUG util.py:450: perl-Socket x86_64 4:2.024-3.fc27 fedora 56 k DEBUG util.py:450: perl-Storable x86_64 1:2.62-393.fc27 fedora 83 k DEBUG util.py:450: perl-Term-ANSIColor noarch 4.06-394.fc27 fedora 44 k DEBUG util.py:450: perl-Term-Cap noarch 1.17-393.fc27 fedora 21 k DEBUG util.py:450: perl-Text-ParseWords noarch 3.30-393.fc27 fedora 16 k DEBUG util.py:450: perl-Text-Tabs+Wrap noarch 2013.0523-393.fc27 fedora 22 k DEBUG util.py:450: perl-Thread-Queue noarch 3.12-393.fc27 fedora 22 k DEBUG util.py:450: perl-Time-Local noarch 1:1.250-393.fc27 fedora 30 k DEBUG util.py:450: perl-Unicode-Normalize x86_64 1.25-393.fc27 fedora 79 k DEBUG util.py:450: perl-constant noarch 1.33-394.fc27 fedora 24 k DEBUG util.py:450: perl-libs x86_64 4:5.26.0-394.fc27 fedora 1.5 M DEBUG util.py:450: perl-macros x86_64 4:5.26.0-394.fc27 fedora 65 k DEBUG util.py:450: perl-parent noarch 1:0.236-393.fc27 fedora 18 k DEBUG util.py:450: perl-podlators noarch 4.09-393.fc27 fedora 114 k DEBUG util.py:450: perl-threads x86_64 1:2.16-2.fc27 fedora 58 k DEBUG util.py:450: perl-threads-shared x86_64 1.57-2.fc27 fedora 45 k DEBUG util.py:450: python2 x86_64 2.7.13-12.fc27 fedora 98 k DEBUG util.py:450: python2-libs x86_64 2.7.13-12.fc27 fedora 6.3 M DEBUG util.py:450: python2-nose noarch 1.3.7-13.fc26 fedora 266 k DEBUG util.py:450: python2-numpy x86_64 1:1.13.1-1.fc27 fedora 3.5 M DEBUG util.py:450: python2-pip noarch 9.0.1-10.fc27 fedora 1.8 M DEBUG util.py:450: python2-setuptools noarch 36.0.1-1.fc27 fedora 595 k DEBUG util.py:450: samtools-libs x86_64 0.1.19-10.fc26 fedora 104 k DEBUG util.py:450: Transaction Summary DEBUG util.py:450: ================================================================================ DEBUG util.py:450: Install 109 Packages DEBUG util.py:450: Total download size: 114 M DEBUG util.py:450: Installed size: 619 M DEBUG util.py:450: Downloading Packages: DEBUG util.py:450: (1/109): perl-generators-1.10-4.fc27.noarch.rpm 66 kB/s | 16 kB 00:00 DEBUG util.py:450: (2/109): gsl-devel-2.4-1.fc27.x86_64.rpm 6.5 MB/s | 563 kB 00:00 DEBUG util.py:450: (3/109): armadillo-devel-7.900.1-1.fc27.x86_64. 2.3 MB/s | 1.2 MB 00:00 DEBUG util.py:450: (4/109): samtools-devel-0.1.19-10.fc26.x86_64.r 103 kB/s | 36 kB 00:00 DEBUG util.py:450: (5/109): boost-devel-1.63.0-9.fc27.x86_64.rpm 9.6 MB/s | 9.2 MB 00:00 DEBUG util.py:450: (6/109): zlib-devel-1.2.11-2.fc26.x86_64.rpm 131 kB/s | 56 kB 00:00 DEBUG util.py:450: (7/109): perl-Fedora-VSP-0.001-7.fc27.noarch.rp 299 kB/s | 23 kB 00:00 DEBUG util.py:450: (8/109): perl-macros-5.26.0-394.fc27.x86_64.rpm 721 kB/s | 65 kB 00:00 DEBUG util.py:450: (9/109): armadillo-7.900.1-1.fc27.x86_64.rpm 567 kB/s | 28 kB 00:00 DEBUG util.py:450: (10/109): boost-1.63.0-9.fc27.x86_64.rpm 832 kB/s | 47 kB 00:00 DEBUG util.py:450: (11/109): boost-atomic-1.63.0-9.fc27.x86_64.rpm 1.1 MB/s | 49 kB 00:00 DEBUG util.py:450: (12/109): boost-container-1.63.0-9.fc27.x86_64. 563 kB/s | 78 kB 00:00 DEBUG util.py:450: (13/109): boost-chrono-1.63.0-9.fc27.x86_64.rpm 316 kB/s | 52 kB 00:00 DEBUG util.py:450: (14/109): boost-coroutine-1.63.0-9.fc27.x86_64. 1.5 MB/s | 63 kB 00:00 DEBUG util.py:450: (15/109): boost-context-1.63.0-9.fc27.x86_64.rp 1.0 MB/s | 51 kB 00:00 DEBUG util.py:450: (16/109): boost-fiber-1.63.0-9.fc27.x86_64.rpm 1.3 MB/s | 74 kB 00:00 DEBUG util.py:450: (17/109): boost-date-time-1.63.0-9.fc27.x86_64. 890 kB/s | 62 kB 00:00 DEBUG util.py:450: (18/109): boost-filesystem-1.63.0-9.fc27.x86_64 841 kB/s | 78 kB 00:00 DEBUG util.py:450: (19/109): perl-5.26.0-394.fc27.x86_64.rpm 7.7 MB/s | 6.2 MB 00:00 DEBUG util.py:450: (20/109): boost-graph-1.63.0-9.fc27.x86_64.rpm 1.2 MB/s | 142 kB 00:00 DEBUG util.py:450: (21/109): boost-iostreams-1.63.0-9.fc27.x86_64. 1.4 MB/s | 73 kB 00:00 DEBUG util.py:450: (22/109): boost-log-1.63.0-9.fc27.x86_64.rpm 16 MB/s | 459 kB 00:00 DEBUG util.py:450: (23/109): boost-locale-1.63.0-9.fc27.x86_64.rpm 4.9 MB/s | 280 kB 00:00 DEBUG util.py:450: (24/109): boost-math-1.63.0-9.fc27.x86_64.rpm 6.0 MB/s | 298 kB 00:00 DEBUG util.py:450: (25/109): boost-numpy-1.63.0-9.fc27.x86_64.rpm 1.6 MB/s | 60 kB 00:00 DEBUG util.py:450: (26/109): boost-program-options-1.63.0-9.fc27.x 4.6 MB/s | 171 kB 00:00 DEBUG util.py:450: (27/109): boost-random-1.63.0-9.fc27.x86_64.rpm 2.0 MB/s | 55 kB 00:00 DEBUG util.py:450: (28/109): boost-python-1.63.0-9.fc27.x86_64.rpm 3.3 MB/s | 127 kB 00:00 DEBUG util.py:450: (29/109): boost-regex-1.63.0-9.fc27.x86_64.rpm 10 MB/s | 298 kB 00:00 DEBUG util.py:450: (30/109): boost-signals-1.63.0-9.fc27.x86_64.rp 5.1 MB/s | 73 kB 00:00 DEBUG util.py:450: (31/109): boost-system-1.63.0-9.fc27.x86_64.rpm 7.7 MB/s | 52 kB 00:00 DEBUG util.py:450: (32/109): boost-serialization-1.63.0-9.fc27.x86 3.0 MB/s | 156 kB 00:00 DEBUG util.py:450: (33/109): boost-timer-1.63.0-9.fc27.x86_64.rpm 1.4 MB/s | 54 kB 00:00 DEBUG util.py:450: (34/109): boost-type_erasure-1.63.0-9.fc27.x86_ 4.4 MB/s | 63 kB 00:00 DEBUG util.py:450: (35/109): boost-test-1.63.0-9.fc27.x86_64.rpm 3.9 MB/s | 268 kB 00:00 DEBUG util.py:450: (36/109): boost-wave-1.63.0-9.fc27.x86_64.rpm 5.6 MB/s | 224 kB 00:00 DEBUG util.py:450: (37/109): libquadmath-devel-7.1.1-5.fc27.x86_64 1.8 MB/s | 35 kB 00:00 DEBUG util.py:450: (38/109): libicu-devel-57.1-4.fc26.x86_64.rpm 17 MB/s | 914 kB 00:00 DEBUG util.py:450: (39/109): gsl-2.4-1.fc27.x86_64.rpm 34 MB/s | 998 kB 00:00 DEBUG util.py:450: (40/109): samtools-libs-0.1.19-10.fc26.x86_64.r 3.9 MB/s | 104 kB 00:00 DEBUG util.py:450: (41/109): perl-Carp-1.42-393.fc27.noarch.rpm 1.3 MB/s | 28 kB 00:00 DEBUG util.py:450: (42/109): automake-1.15-9.fc26.noarch.rpm 12 MB/s | 695 kB 00:00 DEBUG util.py:450: (43/109): perl-Exporter-5.72-394.fc27.noarch.rp 1.2 MB/s | 32 kB 00:00 DEBUG util.py:450: (44/109): perl-File-Path-2.14-1.fc27.noarch.rpm 1.3 MB/s | 36 kB 00:00 DEBUG util.py:450: (45/109): perl-IO-1.38-394.fc27.x86_64.rpm 7.4 MB/s | 134 kB 00:00 DEBUG util.py:450: (46/109): perl-PathTools-3.67-393.fc27.x86_64.r 4.0 MB/s | 88 kB 00:00 DEBUG util.py:450: (47/109): perl-Scalar-List-Utils-1.48-1.fc27.x8 3.4 MB/s | 65 kB 00:00 DEBUG util.py:450: (48/109): perl-Text-Tabs+Wrap-2013.0523-393.fc2 1.5 MB/s | 22 kB 00:00 DEBUG util.py:450: (49/109): perl-Unicode-Normalize-1.25-393.fc27. 7.6 MB/s | 79 kB 00:00 DEBUG util.py:450: (50/109): perl-constant-1.33-394.fc27.noarch.rp 3.8 MB/s | 24 kB 00:00 DEBUG util.py:450: (51/109): perl-parent-0.236-393.fc27.noarch.rpm 1.1 MB/s | 18 kB 00:00 DEBUG util.py:450: (52/109): perl-threads-2.16-2.fc27.x86_64.rpm 2.7 MB/s | 58 kB 00:00 DEBUG util.py:450: (53/109): perl-threads-shared-1.57-2.fc27.x86_6 2.1 MB/s | 45 kB 00:00 DEBUG util.py:450: (54/109): SuperLU-5.2.0-2.fc26.x86_64.rpm 6.3 MB/s | 189 kB 00:00 DEBUG util.py:450: (55/109): perl-libs-5.26.0-394.fc27.x86_64.rpm 17 MB/s | 1.5 MB 00:00 DEBUG util.py:450: (56/109): arpack-3.5.0-2.fc27.x86_64.rpm 1.6 MB/s | 190 kB 00:00 DEBUG util.py:450: (57/109): boost-thread-1.63.0-9.fc27.x86_64.rpm 1.0 MB/s | 91 kB 00:00 DEBUG util.py:450: (58/109): lapack-3.6.1-4.fc26.x86_64.rpm 21 MB/s | 6.0 MB 00:00 DEBUG util.py:450: (59/109): libquadmath-7.1.1-5.fc27.x86_64.rpm 1.8 MB/s | 179 kB 00:00 DEBUG util.py:450: (60/109): openblas-openmp-0.2.19-11.fc27.x86_64 11 MB/s | 4.2 MB 00:00 DEBUG util.py:450: (61/109): autoconf-2.69-24.fc26.noarch.rpm 5.1 MB/s | 709 kB 00:00 DEBUG util.py:450: (62/109): perl-Errno-1.28-394.fc27.x86_64.rpm 1.4 MB/s | 69 kB 00:00 DEBUG util.py:450: (63/109): python2-libs-2.7.13-12.fc27.x86_64.rp 20 MB/s | 6.3 MB 00:00 DEBUG util.py:450: (64/109): libicu-57.1-4.fc26.x86_64.rpm 14 MB/s | 8.4 MB 00:00 DEBUG util.py:450: (65/109): perl-Thread-Queue-3.12-393.fc27.noarc 257 kB/s | 22 kB 00:00 DEBUG util.py:450: (66/109): perl-Getopt-Long-2.50-2.fc27.noarch.r 276 kB/s | 61 kB 00:00 DEBUG util.py:450: (67/109): perl-Socket-2.024-3.fc27.x86_64.rpm 750 kB/s | 56 kB 00:00 DEBUG util.py:450: (68/109): libgfortran-7.1.1-5.fc27.x86_64.rpm 7.8 MB/s | 532 kB 00:00 DEBUG util.py:450: (69/109): atlas-3.10.2-16.fc26.x86_64.rpm 18 MB/s | 6.2 MB 00:00 DEBUG util.py:450: (70/109): openblas-threads-0.2.19-11.fc27.x86_6 9.3 MB/s | 4.2 MB 00:00 DEBUG util.py:450: (71/109): openblas-0.2.19-11.fc27.x86_64.rpm 7.8 MB/s | 4.1 MB 00:00 DEBUG util.py:450: (72/109): openblas-threads64_-0.2.19-11.fc27.x8 8.0 MB/s | 4.1 MB 00:00 DEBUG util.py:450: (73/109): emacs-filesystem-25.2-2.fc27.noarch.r 232 kB/s | 66 kB 00:00 DEBUG util.py:450: (74/109): blas-3.6.1-4.fc26.x86_64.rpm 1.2 MB/s | 394 kB 00:00 DEBUG util.py:450: (75/109): m4-1.4.18-3.fc26.x86_64.rpm 5.1 MB/s | 217 kB 00:00 DEBUG util.py:450: (76/109): perl-Data-Dumper-2.167-394.fc27.x86_6 1.8 MB/s | 55 kB 00:00 DEBUG util.py:450: (77/109): perl-Text-ParseWords-3.30-393.fc27.no 1.8 MB/s | 16 kB 00:00 DEBUG util.py:450: (78/109): perl-Pod-Usage-1.69-393.fc27.noarch.r 4.0 MB/s | 33 kB 00:00 DEBUG util.py:450: (79/109): perl-Pod-Perldoc-3.28-394.fc27.noarch 9.1 MB/s | 87 kB 00:00 DEBUG util.py:450: (80/109): perl-podlators-4.09-393.fc27.noarch.r 11 MB/s | 114 kB 00:00 DEBUG util.py:450: (81/109): perl-File-Temp-0.230.400-393.fc27.noa 4.6 MB/s | 61 kB 00:00 DEBUG util.py:450: (82/109): groff-base-1.22.3-9.fc26.x86_64.rpm 31 MB/s | 1.0 MB 00:00 DEBUG util.py:450: (83/109): perl-HTTP-Tiny-0.070-393.fc27.noarch. 2.1 MB/s | 56 kB 00:00 DEBUG util.py:450: (84/109): perl-Pod-Simple-3.35-393.fc27.noarch. 9.2 MB/s | 211 kB 00:00 DEBUG util.py:450: (85/109): perl-Term-ANSIColor-4.06-394.fc27.noa 3.9 MB/s | 44 kB 00:00 DEBUG util.py:450: (86/109): perl-Term-Cap-1.17-393.fc27.noarch.rp 1.2 MB/s | 21 kB 00:00 DEBUG util.py:450: (87/109): perl-MIME-Base64-3.15-393.fc27.x86_64 981 kB/s | 28 kB 00:00 DEBUG util.py:450: (88/109): perl-Time-Local-1.250-393.fc27.noarch 878 kB/s | 30 kB 00:00 DEBUG util.py:450: (89/109): perl-Pod-Escapes-1.07-393.fc27.noarch 664 kB/s | 19 kB 00:00 DEBUG util.py:450: (90/109): perl-Storable-2.62-393.fc27.x86_64.rp 5.3 MB/s | 83 kB 00:00 DEBUG util.py:450: (91/109): perl-Encode-2.91-11.fc27.x86_64.rpm 28 MB/s | 1.5 MB 00:00 DEBUG util.py:450: (92/109): python2-nose-1.3.7-13.fc26.noarch.rpm 7.1 MB/s | 266 kB 00:00 DEBUG util.py:450: (93/109): python2-setuptools-36.0.1-1.fc27.noar 9.9 MB/s | 595 kB 00:00 DEBUG util.py:450: (94/109): SuperLU-devel-5.2.0-2.fc26.x86_64.rpm 368 kB/s | 27 kB 00:00 DEBUG util.py:450: (95/109): arpack-devel-3.5.0-2.fc27.x86_64.rpm 234 kB/s | 11 kB 00:00 DEBUG util.py:450: (96/109): hdf5-devel-1.8.18-5.fc26.x86_64.rpm 10 MB/s | 923 kB 00:00 DEBUG util.py:450: (97/109): python2-numpy-1.13.1-1.fc27.x86_64.rp 11 MB/s | 3.5 MB 00:00 DEBUG util.py:450: (98/109): hdf5-1.8.18-5.fc26.x86_64.rpm 8.5 MB/s | 1.7 MB 00:00 DEBUG util.py:450: (99/109): lapack-devel-3.6.1-4.fc26.x86_64.rpm 493 kB/s | 80 kB 00:00 DEBUG util.py:450: (100/109): blas-devel-3.6.1-4.fc26.x86_64.rpm 130 kB/s | 17 kB 00:00 DEBUG util.py:450: (101/109): openblas-devel-0.2.19-11.fc27.x86_64 743 kB/s | 83 kB 00:00 DEBUG util.py:450: (102/109): openblas-openmp64-0.2.19-11.fc27.x86 8.0 MB/s | 4.1 MB 00:00 DEBUG util.py:450: (103/109): openblas-openmp64_-0.2.19-11.fc27.x8 6.9 MB/s | 4.1 MB 00:00 DEBUG util.py:450: (104/109): openblas-serial64-0.2.19-11.fc27.x86 6.3 MB/s | 4.0 MB 00:00 DEBUG util.py:450: (105/109): openblas-serial64_-0.2.19-11.fc27.x8 8.6 MB/s | 4.0 MB 00:00 DEBUG util.py:450: (106/109): python2-2.7.13-12.fc27.x86_64.rpm 289 kB/s | 98 kB 00:00 DEBUG util.py:450: (107/109): openblas-threads64-0.2.19-11.fc27.x8 7.8 MB/s | 4.1 MB 00:00 DEBUG util.py:450: (108/109): python2-pip-9.0.1-10.fc27.noarch.rpm 6.6 MB/s | 1.8 MB 00:00 DEBUG util.py:450: (109/109): gcc-gfortran-7.1.1-5.fc27.x86_64.rpm 28 MB/s | 10 MB 00:00 DEBUG util.py:450: -------------------------------------------------------------------------------- DEBUG util.py:450: Total 19 MB/s | 114 MB 00:05 DEBUG util.py:450: Running transaction check DEBUG util.py:450: Transaction check succeeded. DEBUG util.py:450: Running transaction test DEBUG util.py:450: Transaction test succeeded. DEBUG util.py:450: Running transaction DEBUG util.py:450: Preparing : 1/1 DEBUG util.py:450: Installing : perl-Exporter-5.72-394.fc27.noarch 1/109 DEBUG util.py:450: Installing : perl-libs-4:5.26.0-394.fc27.x86_64 2/109 DEBUG util.py:450: Running scriptlet: perl-libs-4:5.26.0-394.fc27.x86_64 2/109 DEBUG util.py:450: Installing : perl-Carp-1.42-393.fc27.noarch 3/109 DEBUG util.py:450: Installing : boost-system-1.63.0-9.fc27.x86_64 4/109 DEBUG util.py:450: Running scriptlet: boost-system-1.63.0-9.fc27.x86_64 4/109 DEBUG util.py:450: Installing : boost-chrono-1.63.0-9.fc27.x86_64 5/109 DEBUG util.py:450: Running scriptlet: boost-chrono-1.63.0-9.fc27.x86_64 5/109 DEBUG util.py:450: Installing : libquadmath-7.1.1-5.fc27.x86_64 6/109 DEBUG util.py:450: Running scriptlet: libquadmath-7.1.1-5.fc27.x86_64 6/109 DEBUG util.py:450: install-info: No such file or directory for /dev/null DEBUG util.py:450: Installing : libgfortran-7.1.1-5.fc27.x86_64 7/109 DEBUG util.py:450: Running scriptlet: libgfortran-7.1.1-5.fc27.x86_64 7/109 DEBUG util.py:450: Installing : boost-thread-1.63.0-9.fc27.x86_64 8/109 DEBUG util.py:450: Running scriptlet: boost-thread-1.63.0-9.fc27.x86_64 8/109 DEBUG util.py:450: Installing : perl-Scalar-List-Utils-3:1.48-1.fc27.x86_64 9/109 DEBUG util.py:450: Installing : libicu-57.1-4.fc26.x86_64 10/109 DEBUG util.py:450: Running scriptlet: libicu-57.1-4.fc26.x86_64 10/109 DEBUG util.py:450: Installing : boost-regex-1.63.0-9.fc27.x86_64 11/109 DEBUG util.py:450: Running scriptlet: boost-regex-1.63.0-9.fc27.x86_64 11/109 DEBUG util.py:450: Installing : boost-filesystem-1.63.0-9.fc27.x86_64 12/109 DEBUG util.py:450: Running scriptlet: boost-filesystem-1.63.0-9.fc27.x86_64 12/109 DEBUG util.py:450: Installing : python2-libs-2.7.13-12.fc27.x86_64 13/109 DEBUG util.py:450: Running scriptlet: python2-libs-2.7.13-12.fc27.x86_64 13/109 DEBUG util.py:450: Installing : python2-setuptools-36.0.1-1.fc27.noarch 14/109 DEBUG util.py:450: Installing : python2-pip-9.0.1-10.fc27.noarch 15/109 DEBUG util.py:450: Installing : python2-2.7.13-12.fc27.x86_64 16/109 DEBUG util.py:450: Installing : boost-date-time-1.63.0-9.fc27.x86_64 17/109 DEBUG util.py:450: Running scriptlet: boost-date-time-1.63.0-9.fc27.x86_64 17/109 DEBUG util.py:450: Installing : boost-context-1.63.0-9.fc27.x86_64 18/109 DEBUG util.py:450: Running scriptlet: boost-context-1.63.0-9.fc27.x86_64 18/109 DEBUG util.py:450: Installing : boost-python-1.63.0-9.fc27.x86_64 19/109 DEBUG util.py:450: Running scriptlet: boost-python-1.63.0-9.fc27.x86_64 19/109 DEBUG util.py:450: Installing : boost-timer-1.63.0-9.fc27.x86_64 20/109 DEBUG util.py:450: Running scriptlet: boost-timer-1.63.0-9.fc27.x86_64 20/109 DEBUG util.py:450: Installing : perl-Text-ParseWords-3.30-393.fc27.noarch 21/109 DEBUG util.py:450: Installing : boost-atomic-1.63.0-9.fc27.x86_64 22/109 DEBUG util.py:450: Running scriptlet: boost-atomic-1.63.0-9.fc27.x86_64 22/109 DEBUG util.py:450: Installing : boost-log-1.63.0-9.fc27.x86_64 23/109 DEBUG util.py:450: Running scriptlet: boost-log-1.63.0-9.fc27.x86_64 23/109 DEBUG util.py:450: Installing : boost-test-1.63.0-9.fc27.x86_64 24/109 DEBUG util.py:450: Running scriptlet: boost-test-1.63.0-9.fc27.x86_64 24/109 DEBUG util.py:450: Installing : boost-coroutine-1.63.0-9.fc27.x86_64 25/109 DEBUG util.py:450: Running scriptlet: boost-coroutine-1.63.0-9.fc27.x86_64 25/109 DEBUG util.py:450: Installing : boost-fiber-1.63.0-9.fc27.x86_64 26/109 DEBUG util.py:450: Running scriptlet: boost-fiber-1.63.0-9.fc27.x86_64 26/109 DEBUG util.py:450: Installing : boost-wave-1.63.0-9.fc27.x86_64 27/109 DEBUG util.py:450: Running scriptlet: boost-wave-1.63.0-9.fc27.x86_64 27/109 DEBUG util.py:450: Installing : boost-graph-1.63.0-9.fc27.x86_64 28/109 DEBUG util.py:450: Running scriptlet: boost-graph-1.63.0-9.fc27.x86_64 28/109 DEBUG util.py:450: Installing : boost-locale-1.63.0-9.fc27.x86_64 29/109 DEBUG util.py:450: Running scriptlet: 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util.py:450: armadillo-devel.x86_64 7.900.1-1.fc27 DEBUG util.py:450: boost-devel.x86_64 1.63.0-9.fc27 DEBUG util.py:450: gsl-devel.x86_64 2.4-1.fc27 DEBUG util.py:450: perl-generators.noarch 1.10-4.fc27 DEBUG util.py:450: samtools-devel.x86_64 0.1.19-10.fc26 DEBUG util.py:450: zlib-devel.x86_64 1.2.11-2.fc26 DEBUG util.py:450: SuperLU.x86_64 5.2.0-2.fc26 DEBUG util.py:450: SuperLU-devel.x86_64 5.2.0-2.fc26 DEBUG util.py:450: armadillo.x86_64 7.900.1-1.fc27 DEBUG util.py:450: arpack.x86_64 3.5.0-2.fc27 DEBUG util.py:450: arpack-devel.x86_64 3.5.0-2.fc27 DEBUG util.py:450: atlas.x86_64 3.10.2-16.fc26 DEBUG util.py:450: autoconf.noarch 2.69-24.fc26 DEBUG util.py:450: automake.noarch 1.15-9.fc26 DEBUG util.py:450: blas.x86_64 3.6.1-4.fc26 DEBUG util.py:450: blas-devel.x86_64 3.6.1-4.fc26 DEBUG util.py:450: boost.x86_64 1.63.0-9.fc27 DEBUG util.py:450: boost-atomic.x86_64 1.63.0-9.fc27 DEBUG util.py:450: boost-chrono.x86_64 1.63.0-9.fc27 DEBUG util.py:450: boost-container.x86_64 1.63.0-9.fc27 DEBUG util.py:450: boost-context.x86_64 1.63.0-9.fc27 DEBUG util.py:450: boost-coroutine.x86_64 1.63.0-9.fc27 DEBUG util.py:450: boost-date-time.x86_64 1.63.0-9.fc27 DEBUG util.py:450: boost-fiber.x86_64 1.63.0-9.fc27 DEBUG util.py:450: boost-filesystem.x86_64 1.63.0-9.fc27 DEBUG util.py:450: boost-graph.x86_64 1.63.0-9.fc27 DEBUG util.py:450: boost-iostreams.x86_64 1.63.0-9.fc27 DEBUG util.py:450: boost-locale.x86_64 1.63.0-9.fc27 DEBUG util.py:450: boost-log.x86_64 1.63.0-9.fc27 DEBUG util.py:450: boost-math.x86_64 1.63.0-9.fc27 DEBUG util.py:450: boost-numpy.x86_64 1.63.0-9.fc27 DEBUG util.py:450: boost-program-options.x86_64 1.63.0-9.fc27 DEBUG util.py:450: boost-python.x86_64 1.63.0-9.fc27 DEBUG util.py:450: boost-random.x86_64 1.63.0-9.fc27 DEBUG util.py:450: boost-regex.x86_64 1.63.0-9.fc27 DEBUG util.py:450: boost-serialization.x86_64 1.63.0-9.fc27 DEBUG util.py:450: boost-signals.x86_64 1.63.0-9.fc27 DEBUG util.py:450: boost-system.x86_64 1.63.0-9.fc27 DEBUG util.py:450: boost-test.x86_64 1.63.0-9.fc27 DEBUG util.py:450: boost-thread.x86_64 1.63.0-9.fc27 DEBUG util.py:450: boost-timer.x86_64 1.63.0-9.fc27 DEBUG util.py:450: boost-type_erasure.x86_64 1.63.0-9.fc27 DEBUG util.py:450: boost-wave.x86_64 1.63.0-9.fc27 DEBUG util.py:450: emacs-filesystem.noarch 1:25.2-2.fc27 DEBUG util.py:450: gcc-gfortran.x86_64 7.1.1-5.fc27 DEBUG util.py:450: groff-base.x86_64 1.22.3-9.fc26 DEBUG util.py:450: gsl.x86_64 2.4-1.fc27 DEBUG util.py:450: hdf5.x86_64 1.8.18-5.fc26 DEBUG util.py:450: hdf5-devel.x86_64 1.8.18-5.fc26 DEBUG util.py:450: lapack.x86_64 3.6.1-4.fc26 DEBUG util.py:450: lapack-devel.x86_64 3.6.1-4.fc26 DEBUG util.py:450: libgfortran.x86_64 7.1.1-5.fc27 DEBUG util.py:450: libicu.x86_64 57.1-4.fc26 DEBUG util.py:450: libicu-devel.x86_64 57.1-4.fc26 DEBUG util.py:450: libquadmath.x86_64 7.1.1-5.fc27 DEBUG util.py:450: libquadmath-devel.x86_64 7.1.1-5.fc27 DEBUG util.py:450: m4.x86_64 1.4.18-3.fc26 DEBUG util.py:450: openblas.x86_64 0.2.19-11.fc27 DEBUG util.py:450: openblas-devel.x86_64 0.2.19-11.fc27 DEBUG util.py:450: openblas-openmp.x86_64 0.2.19-11.fc27 DEBUG util.py:450: openblas-openmp64.x86_64 0.2.19-11.fc27 DEBUG util.py:450: openblas-openmp64_.x86_64 0.2.19-11.fc27 DEBUG util.py:450: openblas-serial64.x86_64 0.2.19-11.fc27 DEBUG util.py:450: openblas-serial64_.x86_64 0.2.19-11.fc27 DEBUG util.py:450: openblas-threads.x86_64 0.2.19-11.fc27 DEBUG util.py:450: openblas-threads64.x86_64 0.2.19-11.fc27 DEBUG util.py:450: openblas-threads64_.x86_64 0.2.19-11.fc27 DEBUG util.py:450: perl.x86_64 4:5.26.0-394.fc27 DEBUG util.py:450: perl-Carp.noarch 1.42-393.fc27 DEBUG util.py:450: perl-Data-Dumper.x86_64 2.167-394.fc27 DEBUG util.py:450: perl-Encode.x86_64 4:2.91-11.fc27 DEBUG util.py:450: perl-Errno.x86_64 1.28-394.fc27 DEBUG util.py:450: perl-Exporter.noarch 5.72-394.fc27 DEBUG util.py:450: perl-Fedora-VSP.noarch 0.001-7.fc27 DEBUG util.py:450: perl-File-Path.noarch 2.14-1.fc27 DEBUG util.py:450: perl-File-Temp.noarch 0.230.400-393.fc27 DEBUG util.py:450: perl-Getopt-Long.noarch 1:2.50-2.fc27 DEBUG util.py:450: perl-HTTP-Tiny.noarch 0.070-393.fc27 DEBUG util.py:450: perl-IO.x86_64 1.38-394.fc27 DEBUG util.py:450: perl-MIME-Base64.x86_64 3.15-393.fc27 DEBUG util.py:450: perl-PathTools.x86_64 3.67-393.fc27 DEBUG util.py:450: perl-Pod-Escapes.noarch 1:1.07-393.fc27 DEBUG util.py:450: perl-Pod-Perldoc.noarch 3.28-394.fc27 DEBUG util.py:450: perl-Pod-Simple.noarch 1:3.35-393.fc27 DEBUG util.py:450: perl-Pod-Usage.noarch 4:1.69-393.fc27 DEBUG util.py:450: perl-Scalar-List-Utils.x86_64 3:1.48-1.fc27 DEBUG util.py:450: perl-Socket.x86_64 4:2.024-3.fc27 DEBUG util.py:450: perl-Storable.x86_64 1:2.62-393.fc27 DEBUG util.py:450: perl-Term-ANSIColor.noarch 4.06-394.fc27 DEBUG util.py:450: perl-Term-Cap.noarch 1.17-393.fc27 DEBUG util.py:450: perl-Text-ParseWords.noarch 3.30-393.fc27 DEBUG util.py:450: perl-Text-Tabs+Wrap.noarch 2013.0523-393.fc27 DEBUG util.py:450: perl-Thread-Queue.noarch 3.12-393.fc27 DEBUG util.py:450: perl-Time-Local.noarch 1:1.250-393.fc27 DEBUG util.py:450: perl-Unicode-Normalize.x86_64 1.25-393.fc27 DEBUG util.py:450: perl-constant.noarch 1.33-394.fc27 DEBUG util.py:450: perl-libs.x86_64 4:5.26.0-394.fc27 DEBUG util.py:450: perl-macros.x86_64 4:5.26.0-394.fc27 DEBUG util.py:450: perl-parent.noarch 1:0.236-393.fc27 DEBUG util.py:450: perl-podlators.noarch 4.09-393.fc27 DEBUG util.py:450: perl-threads.x86_64 1:2.16-2.fc27 DEBUG util.py:450: perl-threads-shared.x86_64 1.57-2.fc27 DEBUG util.py:450: python2.x86_64 2.7.13-12.fc27 DEBUG util.py:450: python2-libs.x86_64 2.7.13-12.fc27 DEBUG util.py:450: python2-nose.noarch 1.3.7-13.fc26 DEBUG util.py:450: python2-numpy.x86_64 1:1.13.1-1.fc27 DEBUG util.py:450: python2-pip.noarch 9.0.1-10.fc27 DEBUG util.py:450: python2-setuptools.noarch 36.0.1-1.fc27 DEBUG util.py:450: samtools-libs.x86_64 0.1.19-10.fc26 DEBUG util.py:450: Complete! DEBUG util.py:588: Child return code was: 0 DEBUG util.py:606: child environment: None DEBUG util.py:307: Unsharing. Flags: 134217728 DEBUG backend.py:500: Copying packages to result dir DEBUG util.py:606: child environment: None DEBUG util.py:533: Executing command: /usr/bin/gzip -9 --force /var/lib/copr-rpmbuild/results/root.log with env {'TERM': 'vt100', 'SHELL': '/bin/sh', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'LANG': 'en_US.UTF-8'} and shell True