Warning: Permanently added '52.90.64.55' (ED25519) to the list of known hosts. You can reproduce this build on your computer by running: sudo dnf install copr-rpmbuild /usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/8736539-fedora-rawhide-x86_64 --chroot fedora-rawhide-x86_64 Version: 1.2 PID: 9006 Logging PID: 9007 Task: {'allow_user_ssh': False, 'appstream': False, 'background': True, 'build_id': 8736539, 'buildroot_pkgs': [], 'chroot': 'fedora-rawhide-x86_64', 'enable_net': False, 'fedora_review': False, 'git_hash': '6424e17688684b008a84234937c0554954ce7699', 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/cstratak/click-8.1.8/morphio', 'isolation': 'default', 'memory_reqs': 2048, 'package_name': 'morphio', 'package_version': '3.4.0-11', 'project_dirname': 'click-8.1.8', 'project_name': 'click-8.1.8', 'project_owner': 'cstratak', 'repo_priority': None, 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/cstratak/click-8.1.8/fedora-rawhide-x86_64/', 'id': 'copr_base', 'name': 'Copr repository', 'priority': None}, {'baseurl': 'http://kojipkgs.fedoraproject.org/repos/rawhide/latest/$basearch/', 'id': 'http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch', 'name': 'Additional repo http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch'}], 'sandbox': 'cstratak/click-8.1.8--https://src.fedoraproject.org/user/music', 'source_json': {}, 'source_type': None, 'ssh_public_keys': None, 'storage': 0, 'submitter': 'https://src.fedoraproject.org/user/music', 'tags': [], 'task_id': '8736539-fedora-rawhide-x86_64', 'timeout': 18000, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/cstratak/click-8.1.8/morphio /var/lib/copr-rpmbuild/workspace/workdir-4lkazkn_/morphio --depth 500 --no-single-branch --recursive cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/cstratak/click-8.1.8/morphio', '/var/lib/copr-rpmbuild/workspace/workdir-4lkazkn_/morphio', '--depth', '500', '--no-single-branch', '--recursive'] cwd: . rc: 0 stdout: stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-4lkazkn_/morphio'... Running: git checkout 6424e17688684b008a84234937c0554954ce7699 -- cmd: ['git', 'checkout', '6424e17688684b008a84234937c0554954ce7699', '--'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-4lkazkn_/morphio rc: 0 stdout: stderr: Note: switching to '6424e17688684b008a84234937c0554954ce7699'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at 6424e17 automatic import of morphio Running: dist-git-client sources cmd: ['dist-git-client', 'sources'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-4lkazkn_/morphio rc: 0 stdout: stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD INFO: Reading stdout from command: git rev-parse HEAD INFO: Reading sources specification file: sources INFO: Downloading MorphIO-3.4.0.tar.gz INFO: Reading stdout from command: curl --help all INFO: Calling: curl -H Pragma: -o MorphIO-3.4.0.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/cstratak/click-8.1.8/morphio/MorphIO-3.4.0.tar.gz/md5/4d9df366700ab607e7042fbd1e358b66/MorphIO-3.4.0.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 3489k 100 3489k 0 0 233M 0 --:--:-- --:--:-- --:--:-- 243M INFO: Reading stdout from command: md5sum MorphIO-3.4.0.tar.gz /usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated Running (timeout=18000): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-4lkazkn_/morphio/morphio.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-4lkazkn_/morphio --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1741277852.552063 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 6.1 starting (python version = 3.13.0, NVR = mock-6.1-1.fc41), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-4lkazkn_/morphio/morphio.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-4lkazkn_/morphio --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1741277852.552063 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-4lkazkn_/morphio/morphio.spec) Config(fedora-rawhide-x86_64) Start: clean chroot Finish: clean chroot Mock Version: 6.1 INFO: Mock Version: 6.1 Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1741277852.552063/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: Guessed host environment type: unknown INFO: Using container image: registry.fedoraproject.org/fedora:rawhide INFO: Pulling image: registry.fedoraproject.org/fedora:rawhide INFO: Tagging container image as mock-bootstrap-4b0ca59a-3344-4242-879a-ef22473a536c INFO: Checking that 1d16828c06dc16873b94d5f93629fa98be4b4b591313a41a02c4ad7c344ad06f image matches host's architecture INFO: Copy content of container 1d16828c06dc16873b94d5f93629fa98be4b4b591313a41a02c4ad7c344ad06f to /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1741277852.552063/root INFO: mounting 1d16828c06dc16873b94d5f93629fa98be4b4b591313a41a02c4ad7c344ad06f with podman image mount INFO: image 1d16828c06dc16873b94d5f93629fa98be4b4b591313a41a02c4ad7c344ad06f as /var/lib/containers/storage/overlay/15aab11e189c9738d55c07adf7392030bd333bbab412621da9c883bbd618f588/merged INFO: umounting image 1d16828c06dc16873b94d5f93629fa98be4b4b591313a41a02c4ad7c344ad06f (/var/lib/containers/storage/overlay/15aab11e189c9738d55c07adf7392030bd333bbab412621da9c883bbd618f588/merged) with podman image umount INFO: Removing image mock-bootstrap-4b0ca59a-3344-4242-879a-ef22473a536c INFO: Package manager dnf5 detected and used (fallback) INFO: Not updating bootstrap chroot, bootstrap_image_ready=True Start(bootstrap): creating root cache Finish(bootstrap): creating root cache Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-1741277852.552063/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf5 detected and used (direct choice) INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.20.1-1.fc43.x86_64 rpm-sequoia-1.7.0-5.fc43.x86_64 dnf5-5.2.10.0-2.fc43.x86_64 dnf5-plugins-5.2.10.0-2.fc43.x86_64 Start: installing minimal buildroot with dnf5 Updating and loading repositories: fedora 100% | 36.0 MiB/s | 21.7 MiB | 00m01s Copr repository 100% | 4.1 MiB/s | 397.2 KiB | 00m00s Additional repo http_kojipkgs_fedorapr 100% | 81.5 MiB/s | 14.3 MiB | 00m00s Repositories loaded. Package Arch Version Repository Size Installing group/module packages: bash x86_64 5.2.37-3.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 8.2 MiB bzip2 x86_64 1.0.8-20.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 99.3 KiB coreutils x86_64 9.6-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 5.4 MiB cpio x86_64 2.15-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 MiB diffutils x86_64 3.10-9.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.6 MiB fedora-release-common noarch 43-0.6 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 20.1 KiB findutils x86_64 1:4.10.0-5.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.9 MiB gawk x86_64 5.3.1-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.7 MiB glibc-minimal-langpack x86_64 2.41.9000-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 0.0 B grep x86_64 3.11-10.fc42 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http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 655.1 KiB openssl-libs x86_64 1:3.2.4-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 7.8 MiB p11-kit x86_64 0.25.5-5.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.2 MiB p11-kit-trust x86_64 0.25.5-5.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 395.5 KiB package-notes-srpm-macros noarch 0.5-13.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.6 KiB pam-libs x86_64 1.7.0-4.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 126.7 KiB pcre2 x86_64 10.45-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 697.7 KiB pcre2-syntax noarch 10.45-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 273.9 KiB perl-srpm-macros noarch 1-57.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 861.0 B pkgconf x86_64 2.3.0-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 88.5 KiB pkgconf-m4 noarch 2.3.0-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 14.4 KiB pkgconf-pkg-config x86_64 2.3.0-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 989.0 B popt x86_64 1.19-8.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 132.8 KiB publicsuffix-list-dafsa noarch 20250116-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 68.5 KiB pyproject-srpm-macros noarch 1.17.0-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.9 KiB python-srpm-macros noarch 3.13-4.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 51.0 KiB qt5-srpm-macros noarch 5.15.15-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 500.0 B qt6-srpm-macros noarch 6.8.2-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 464.0 B readline x86_64 8.2-13.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 485.0 KiB rpm x86_64 4.20.1-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 3.1 MiB rpm-build-libs x86_64 4.20.1-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 206.6 KiB rpm-libs x86_64 4.20.1-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 721.8 KiB rpm-sequoia x86_64 1.7.0-5.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.4 MiB rust-srpm-macros noarch 26.3-4.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 4.8 KiB setup noarch 2.15.0-13.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 720.9 KiB sqlite-libs x86_64 3.49.0-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.5 MiB systemd-libs x86_64 257.3-7.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.2 MiB systemd-standalone-sysusers x86_64 257.3-7.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 277.3 KiB tree-sitter-srpm-macros noarch 0.1.0-10.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 6.5 KiB util-linux-core x86_64 2.40.4-7.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.4 MiB xxhash-libs x86_64 0.8.3-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 90.2 KiB xz-libs x86_64 1:5.6.3-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 218.3 KiB zig-srpm-macros noarch 1-4.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 KiB zip x86_64 3.0-43.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 698.5 KiB zlib-ng-compat x86_64 2.2.4-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 137.6 KiB zstd x86_64 1.5.7-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.7 MiB Installing groups: Buildsystem building group Transaction Summary: Installing: 148 packages Total size of inbound packages is 52 MiB. Need to download 52 MiB. After this operation, 176 MiB extra will be used (install 176 MiB, remove 0 B). [ 1/148] bzip2-0:1.0.8-20.fc42.x86_64 100% | 2.3 MiB/s | 52.1 KiB | 00m00s [ 2/148] cpio-0:2.15-2.fc41.x86_64 100% | 17.4 MiB/s | 285.2 KiB | 00m00s [ 3/148] coreutils-0:9.6-2.fc43.x86_64 100% | 21.6 MiB/s | 1.1 MiB | 00m00s [ 4/148] diffutils-0:3.10-9.fc42.x86_6 100% | 25.8 MiB/s | 396.4 KiB | 00m00s [ 5/148] fedora-release-common-0:43-0. 100% | 5.1 MiB/s | 25.9 KiB | 00m00s [ 6/148] findutils-1:4.10.0-5.fc42.x86 100% | 35.3 MiB/s | 542.7 KiB | 00m00s [ 7/148] bash-0:5.2.37-3.fc43.x86_64 100% | 25.3 MiB/s | 1.8 MiB | 00m00s [ 8/148] glibc-minimal-langpack-0:2.41 100% | 20.8 MiB/s | 127.9 KiB | 00m00s [ 9/148] gawk-0:5.3.1-1.fc42.x86_64 100% | 48.5 MiB/s | 1.1 MiB | 00m00s [ 10/148] grep-0:3.11-10.fc42.x86_64 100% | 31.5 MiB/s | 290.1 KiB | 00m00s [ 11/148] gzip-0:1.13-3.fc42.x86_64 100% | 26.7 MiB/s | 164.2 KiB | 00m00s [ 12/148] patch-0:2.7.6-26.fc42.x86_64 100% | 20.9 MiB/s | 128.4 KiB | 00m00s [ 13/148] info-0:7.2-3.fc42.x86_64 100% | 25.6 MiB/s | 183.8 KiB | 00m00s [ 14/148] redhat-rpm-config-0:342-2.fc4 100% | 9.1 MiB/s | 74.9 KiB | 00m00s [ 15/148] rpm-build-0:4.20.1-1.fc43.x86 100% | 14.5 MiB/s | 74.3 KiB | 00m00s [ 16/148] sed-0:4.9-4.fc42.x86_64 100% | 37.7 MiB/s | 308.8 KiB | 00m00s [ 17/148] unzip-0:6.0-66.fc42.x86_64 100% | 22.5 MiB/s | 184.6 KiB | 00m00s [ 18/148] tar-2:1.35-5.fc42.x86_64 100% | 52.1 MiB/s | 853.9 KiB | 00m00s [ 19/148] shadow-utils-2:4.17.0-4.fc42. 100% | 62.5 MiB/s | 1.3 MiB | 00m00s [ 20/148] which-0:2.23-1.fc42.x86_64 100% | 6.8 MiB/s | 41.7 KiB | 00m00s [ 21/148] util-linux-0:2.40.4-7.fc43.x8 100% | 69.3 MiB/s | 1.1 MiB | 00m00s [ 22/148] xz-1:5.6.3-3.fc42.x86_64 100% | 32.2 MiB/s | 461.3 KiB | 00m00s [ 23/148] xz-libs-1:5.6.3-3.fc42.x86_64 100% | 18.5 MiB/s | 113.4 KiB | 00m00s [ 24/148] audit-libs-0:4.0.3-2.fc42.x86 100% | 20.4 MiB/s | 125.3 KiB | 00m00s [ 25/148] libblkid-0:2.40.4-7.fc43.x86_ 100% | 17.1 MiB/s | 122.5 KiB | 00m00s [ 26/148] glibc-0:2.41.9000-2.fc43.x86_ 100% | 87.5 MiB/s | 2.3 MiB | 00m00s [ 27/148] filesystem-0:3.18-38.fc43.x86 100% | 77.3 MiB/s | 1.3 MiB | 00m00s [ 28/148] libcap-ng-0:0.8.5-4.fc42.x86_ 100% | 5.2 MiB/s | 32.2 KiB | 00m00s [ 29/148] libfdisk-0:2.40.4-7.fc43.x86_ 100% | 25.7 MiB/s | 158.2 KiB | 00m00s [ 30/148] libmount-0:2.40.4-7.fc43.x86_ 100% | 30.3 MiB/s | 155.0 KiB | 00m00s [ 31/148] libselinux-0:3.8-1.fc42.x86_6 100% | 19.0 MiB/s | 97.1 KiB | 00m00s [ 32/148] libsmartcols-0:2.40.4-7.fc43. 100% | 19.8 MiB/s | 81.2 KiB | 00m00s [ 33/148] libuuid-0:2.40.4-7.fc43.x86_6 100% | 6.2 MiB/s | 25.3 KiB | 00m00s [ 34/148] pam-libs-0:1.7.0-4.fc42.x86_6 100% | 14.2 MiB/s | 58.3 KiB | 00m00s [ 35/148] ncurses-libs-0:6.5-5.20250125 100% | 46.7 MiB/s | 335.0 KiB | 00m00s [ 36/148] readline-0:8.2-13.fc43.x86_64 100% | 29.7 MiB/s | 212.9 KiB | 00m00s [ 37/148] systemd-libs-0:257.3-7.fc43.x 100% | 88.9 MiB/s | 819.8 KiB | 00m00s [ 38/148] zlib-ng-compat-0:2.2.4-2.fc43 100% | 12.9 MiB/s | 79.1 KiB | 00m00s [ 39/148] util-linux-core-0:2.40.4-7.fc 100% | 55.7 MiB/s | 513.8 KiB | 00m00s [ 40/148] libacl-0:2.3.2-3.fc42.x86_64 100% | 5.6 MiB/s | 23.0 KiB | 00m00s [ 41/148] bzip2-libs-0:1.0.8-20.fc42.x8 100% | 8.5 MiB/s | 43.6 KiB | 00m00s [ 42/148] libcap-0:2.73-2.fc42.x86_64 100% | 16.5 MiB/s | 84.3 KiB | 00m00s [ 43/148] libeconf-0:0.7.6-1.fc43.x86_6 100% | 6.9 MiB/s | 35.2 KiB | 00m00s [ 44/148] libgcc-0:15.0.1-0.9.fc43.x86_ 100% | 23.0 MiB/s | 117.9 KiB | 00m00s [ 45/148] libsemanage-0:3.8-1.fc42.x86_ 100% | 24.1 MiB/s | 123.6 KiB | 00m00s [ 46/148] libxcrypt-0:4.4.38-6.fc43.x86 100% | 24.9 MiB/s | 127.3 KiB | 00m00s [ 47/148] setup-0:2.15.0-13.fc43.noarch 100% | 29.2 MiB/s | 149.5 KiB | 00m00s [ 48/148] debugedit-0:5.1-5.fc43.x86_64 100% | 11.0 MiB/s | 78.6 KiB | 00m00s [ 49/148] elfutils-0:0.192-8.fc42.x86_6 100% | 44.4 MiB/s | 545.8 KiB | 00m00s [ 50/148] file-0:5.46-1.fc42.x86_64 100% | 11.9 MiB/s | 48.7 KiB | 00m00s [ 51/148] elfutils-libelf-0:0.192-8.fc4 100% | 18.5 MiB/s | 208.1 KiB | 00m00s [ 52/148] pkgconf-pkg-config-0:2.3.0-2. 100% | 1.6 MiB/s | 9.9 KiB | 00m00s [ 53/148] libarchive-0:3.7.7-3.fc43.x86 100% | 40.2 MiB/s | 411.6 KiB | 00m00s [ 54/148] popt-0:1.19-8.fc42.x86_64 100% | 11.6 MiB/s | 59.4 KiB | 00m00s [ 55/148] rpm-build-libs-0:4.20.1-1.fc4 100% | 16.2 MiB/s | 99.7 KiB | 00m00s [ 56/148] rpm-0:4.20.1-1.fc43.x86_64 100% | 50.4 MiB/s | 515.6 KiB | 00m00s [ 57/148] binutils-0:2.44-3.fc43.x86_64 100% | 109.1 MiB/s | 5.8 MiB | 00m00s [ 58/148] rpm-libs-0:4.20.1-1.fc43.x86_ 100% | 25.4 MiB/s | 312.2 KiB | 00m00s [ 59/148] zstd-0:1.5.7-1.fc43.x86_64 100% | 39.5 MiB/s | 485.8 KiB | 00m00s [ 60/148] curl-0:8.12.1-1.fc43.x86_64 100% | 14.6 MiB/s | 224.3 KiB | 00m00s [ 61/148] ansible-srpm-macros-0:1-17.1. 100% | 1.5 MiB/s | 20.3 KiB | 00m00s [ 62/148] glibc-gconv-extra-0:2.41.9000 100% | 90.6 MiB/s | 1.6 MiB | 00m00s [ 63/148] build-reproducibility-srpm-ma 100% | 1.9 MiB/s | 11.7 KiB | 00m00s [ 64/148] dwz-0:0.15-9.fc42.x86_64 100% | 22.1 MiB/s | 135.7 KiB | 00m00s [ 65/148] efi-srpm-macros-0:6-2.fc42.no 100% | 4.4 MiB/s | 22.5 KiB | 00m00s [ 66/148] filesystem-srpm-macros-0:3.18 100% | 6.2 MiB/s | 25.5 KiB | 00m00s [ 67/148] fonts-srpm-macros-1:2.0.5-21. 100% | 6.6 MiB/s | 27.1 KiB | 00m00s [ 68/148] forge-srpm-macros-0:0.4.0-2.f 100% | 4.8 MiB/s | 19.9 KiB | 00m00s [ 69/148] fpc-srpm-macros-0:1.3-14.fc42 100% | 2.0 MiB/s | 8.0 KiB | 00m00s [ 70/148] ghc-srpm-macros-0:1.9.2-2.fc4 100% | 1.8 MiB/s | 9.2 KiB | 00m00s [ 71/148] gnat-srpm-macros-0:6-7.fc42.n 100% | 2.1 MiB/s | 8.6 KiB | 00m00s [ 72/148] kernel-srpm-macros-0:1.0-25.f 100% | 2.4 MiB/s | 9.9 KiB | 00m00s [ 73/148] lua-srpm-macros-0:1-15.fc42.n 100% | 2.2 MiB/s | 8.9 KiB | 00m00s [ 74/148] go-srpm-macros-0:3.6.0-6.fc42 100% | 4.5 MiB/s | 27.7 KiB | 00m00s [ 75/148] ocaml-srpm-macros-0:10-4.fc42 100% | 2.2 MiB/s | 9.2 KiB | 00m00s [ 76/148] openblas-srpm-macros-0:2-19.f 100% | 1.9 MiB/s | 7.8 KiB | 00m00s [ 77/148] package-notes-srpm-macros-0:0 100% | 2.3 MiB/s | 9.3 KiB | 00m00s [ 78/148] perl-srpm-macros-0:1-57.fc42. 100% | 1.7 MiB/s | 8.5 KiB 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[ 92/148] ncurses-base-0:6.5-5.20250125 100% | 15.5 MiB/s | 63.5 KiB | 00m00s [ 93/148] libsepol-0:3.8-1.fc42.x86_64 100% | 56.8 MiB/s | 348.9 KiB | 00m00s [ 94/148] pcre2-0:10.45-1.fc43.x86_64 100% | 42.8 MiB/s | 262.8 KiB | 00m00s [ 95/148] libxml2-0:2.12.9-2.fc42.x86_6 100% | 68.0 MiB/s | 696.0 KiB | 00m00s [ 96/148] lz4-libs-0:1.10.0-2.fc42.x86_ 100% | 15.2 MiB/s | 78.1 KiB | 00m00s [ 97/148] libzstd-0:1.5.7-1.fc43.x86_64 100% | 51.2 MiB/s | 314.8 KiB | 00m00s [ 98/148] gmp-1:6.3.0-3.fc43.x86_64 100% | 39.3 MiB/s | 322.2 KiB | 00m00s [ 99/148] glibc-common-0:2.41.9000-2.fc 100% | 44.5 MiB/s | 410.3 KiB | 00m00s [100/148] openssl-libs-1:3.2.4-2.fc43.x 100% | 146.5 MiB/s | 2.3 MiB | 00m00s [101/148] mpfr-0:4.2.1-6.fc42.x86_64 100% | 42.5 MiB/s | 348.5 KiB | 00m00s [102/148] fedora-repos-0:43-0.1.noarch 100% | 2.3 MiB/s | 9.3 KiB | 00m00s [103/148] file-libs-0:5.46-1.fc42.x86_6 100% | 69.1 MiB/s | 849.4 KiB | 00m00s [104/148] elfutils-debuginfod-client-0: 100% | 9.1 MiB/s | 46.5 KiB | 00m00s [105/148] elfutils-libs-0:0.192-8.fc42. 100% | 26.0 MiB/s | 265.9 KiB | 00m00s [106/148] libstdc++-0:15.0.1-0.9.fc43.x 100% | 86.7 MiB/s | 887.6 KiB | 00m00s [107/148] coreutils-common-0:9.6-2.fc43 100% | 137.3 MiB/s | 2.1 MiB | 00m00s [108/148] alternatives-0:1.31-3.fc42.x8 100% | 8.0 MiB/s | 40.9 KiB | 00m00s [109/148] add-determinism-0:0.6.0-1.fc4 100% | 89.7 MiB/s | 918.3 KiB | 00m00s [110/148] jansson-0:2.14-2.fc42.x86_64 100% | 11.2 MiB/s | 45.7 KiB | 00m00s [111/148] lua-libs-0:5.4.7-3.fc43.x86_6 100% | 21.2 MiB/s | 130.4 KiB | 00m00s [112/148] rpm-sequoia-0:1.7.0-5.fc43.x8 100% | 89.0 MiB/s | 911.1 KiB | 00m00s [113/148] sqlite-libs-0:3.49.0-1.fc43.x 100% | 83.1 MiB/s | 766.3 KiB | 00m00s [114/148] libgomp-0:15.0.1-0.9.fc43.x86 100% | 42.7 MiB/s | 350.0 KiB | 00m00s [115/148] pcre2-syntax-0:10.45-1.fc43.n 100% | 31.6 MiB/s | 161.7 KiB | 00m00s [116/148] crypto-policies-0:20250214-1. 100% | 14.5 MiB/s | 74.0 KiB | 00m00s [117/148] ca-certificates-0:2024.2.69_v 100% | 102.5 MiB/s | 945.0 KiB | 00m00s [118/148] fedora-repos-rawhide-0:43-0.1 100% | 2.2 MiB/s | 8.8 KiB | 00m00s [119/148] fedora-gpg-keys-0:43-0.1.noar 100% | 24.4 MiB/s | 125.2 KiB | 00m00s [120/148] elfutils-default-yama-scope-0 100% | 3.1 MiB/s | 12.6 KiB | 00m00s [121/148] json-c-0:0.18-2.fc42.x86_64 100% | 11.0 MiB/s | 44.9 KiB | 00m00s [122/148] libffi-0:3.4.7-1.fc43.x86_64 100% | 9.7 MiB/s | 39.9 KiB | 00m00s [123/148] p11-kit-0:0.25.5-5.fc42.x86_6 100% | 77.8 MiB/s | 478.0 KiB | 00m00s [124/148] p11-kit-trust-0:0.25.5-5.fc42 100% | 21.6 MiB/s | 132.6 KiB | 00m00s [125/148] libtasn1-0:4.20.0-1.fc43.x86_ 100% | 14.6 MiB/s | 75.0 KiB | 00m00s [126/148] fedora-release-0:43-0.6.noarc 100% | 2.9 MiB/s | 14.9 KiB | 00m00s [127/148] systemd-standalone-sysusers-0 100% | 30.7 MiB/s | 157.4 KiB | 00m00s [128/148] xxhash-libs-0:0.8.3-2.fc42.x8 100% | 7.6 MiB/s | 39.1 KiB | 00m00s [129/148] fedora-release-identity-basic 100% | 3.1 MiB/s | 15.7 KiB | 00m00s [130/148] libcurl-0:8.12.1-1.fc43.x86_6 100% | 46.5 MiB/s | 381.0 KiB | 00m00s [131/148] krb5-libs-0:1.21.3-5.fc42.x86 100% | 67.5 MiB/s | 760.6 KiB | 00m00s [132/148] libbrotli-0:1.1.0-6.fc42.x86_ 100% | 66.4 MiB/s | 339.8 KiB | 00m00s [133/148] libidn2-0:2.3.7-3.fc42.x86_64 100% | 27.4 MiB/s | 112.2 KiB | 00m00s [134/148] libnghttp2-0:1.65.0-1.fc43.x8 100% | 17.7 MiB/s | 72.6 KiB | 00m00s [135/148] libpsl-0:0.21.5-5.fc42.x86_64 100% | 15.6 MiB/s | 64.0 KiB | 00m00s [136/148] gdb-minimal-0:16.2-1.fc43.x86 100% | 119.9 MiB/s | 4.4 MiB | 00m00s [137/148] libssh-0:0.11.1-4.fc42.x86_64 100% | 25.3 MiB/s | 233.3 KiB | 00m00s [138/148] openldap-0:2.6.9-3.fc42.x86_6 100% | 42.3 MiB/s | 260.2 KiB | 00m00s [139/148] keyutils-libs-0:1.6.3-5.fc42. 100% | 7.7 MiB/s | 31.5 KiB | 00m00s [140/148] libverto-0:0.3.2-10.fc42.x86_ 100% | 5.1 MiB/s | 20.8 KiB | 00m00s [141/148] libcom_err-0:1.47.2-3.fc42.x8 100% | 6.6 MiB/s | 26.9 KiB | 00m00s [142/148] libtool-ltdl-0:2.5.4-4.fc42.x 100% | 7.1 MiB/s | 36.2 KiB | 00m00s [143/148] libevent-0:2.1.12-15.fc42.x86 100% | 42.3 MiB/s | 260.2 KiB | 00m00s [144/148] cyrus-sasl-lib-0:2.1.28-30.fc 100% | 86.1 MiB/s | 793.5 KiB | 00m00s [145/148] libssh-config-0:0.11.1-4.fc42 100% | 2.2 MiB/s | 9.0 KiB | 00m00s [146/148] publicsuffix-list-dafsa-0:202 100% | 14.4 MiB/s | 58.8 KiB | 00m00s [147/148] libunistring-0:1.1-9.fc42.x86 100% | 75.7 MiB/s | 542.5 KiB | 00m00s [148/148] gdbm-libs-1:1.23-9.fc42.x86_6 100% | 13.9 MiB/s | 57.0 KiB | 00m00s -------------------------------------------------------------------------------- [148/148] Total 100% | 114.0 MiB/s | 51.8 MiB | 00m00s Running transaction [ 1/150] Verify package files 100% | 886.0 B/s | 148.0 B | 00m00s [ 2/150] Prepare transaction 100% | 4.0 KiB/s | 148.0 B | 00m00s [ 3/150] Installing libgcc-0:15.0.1-0. 100% | 262.0 MiB/s | 268.3 KiB | 00m00s [ 4/150] Installing publicsuffix-list- 100% | 0.0 B/s | 69.2 KiB | 00m00s [ 5/150] Installing libssh-config-0:0. 100% | 0.0 B/s | 816.0 B | 00m00s [ 6/150] Installing fedora-release-ide 100% | 0.0 B/s | 976.0 B | 00m00s [ 7/150] Installing fedora-gpg-keys-0: 100% | 42.7 MiB/s | 174.8 KiB | 00m00s [ 8/150] Installing fedora-repos-rawhi 100% | 0.0 B/s | 2.4 KiB | 00m00s [ 9/150] Installing fedora-repos-0:43- 100% | 0.0 B/s | 5.7 KiB | 00m00s [ 10/150] Installing fedora-release-com 100% | 23.8 MiB/s | 24.4 KiB | 00m00s [ 11/150] Installing fedora-release-0:4 100% | 11.0 KiB/s | 124.0 B | 00m00s >>> Running unknown scriptlet: setup-0:2.15.0-13.fc43.noarch >>> Finished unknown scriptlet: setup-0:2.15.0-13.fc43.noarch >>> Scriptlet output: >>> Creating group 'adm' with GID 4. >>> Creating group 'audio' with GID 63. >>> Creating group 'bin' with GID 1. >>> Creating group 'cdrom' with GID 11. >>> Creating group 'clock' with GID 103. >>> Creating group 'daemon' with GID 2. >>> Creating group 'dialout' with GID 18. >>> Creating group 'disk' with GID 6. >>> Creating group 'floppy' with GID 19. >>> Creating group 'ftp' with GID 50. >>> Creating group 'games' with GID 20. >>> Creating group 'input' with GID 104. >>> Creating group 'kmem' with GID 9. >>> Creating group 'kvm' with GID 36. >>> Creating group 'lock' with GID 54. >>> Creating group 'lp' with GID 7. >>> Creating group 'mail' with GID 12. >>> Creating group 'man' with GID 15. >>> Creating group 'mem' with GID 8. >>> Creating group 'nobody' with GID 65534. >>> Creating group 'render' with GID 105. >>> Creating group 'root' with GID 0. >>> Creating group 'sgx' with GID 106. >>> Creating group 'sys' with GID 3. >>> Creating group 'tape' with GID 33. >>> Creating group 'tty' with GID 5. >>> Creating group 'users' with GID 100. >>> Creating group 'utmp' with GID 22. >>> Creating group 'video' with GID 39. >>> Creating group 'wheel' with GID 10. >>> >>> Running unknown scriptlet: setup-0:2.15.0-13.fc43.noarch >>> Finished unknown scriptlet: setup-0:2.15.0-13.fc43.noarch >>> Scriptlet output: >>> Creating user 'adm' (adm) with UID 3 and GID 4. >>> Creating user 'bin' (bin) with UID 1 and GID 1. >>> Creating user 'daemon' (daemon) with UID 2 and GID 2. >>> Creating user 'ftp' (FTP User) with UID 14 and GID 50. >>> Creating user 'games' (games) with UID 12 and GID 20. >>> Creating user 'halt' (halt) with UID 7 and GID 0. >>> Creating user 'lp' (lp) with UID 4 and GID 7. >>> Creating user 'mail' (mail) with UID 8 and GID 12. >>> Creating user 'nobody' (Kernel Overflow User) with UID 65534 and GID 65534. >>> Creating user 'operator' (operator) with UID 11 and GID 0. >>> Creating user 'root' (Super User) with UID 0 and GID 0. >>> Creating user 'shutdown' (shutdown) with UID 6 and GID 0. >>> Creating user 'sync' (sync) with UID 5 and GID 0. >>> [ 12/150] Installing setup-0:2.15.0-13. 100% | 54.6 MiB/s | 726.7 KiB | 00m00s >>> [RPM] /etc/hosts created as /etc/hosts.rpmnew [ 13/150] Installing filesystem-0:3.18- 100% | 2.8 MiB/s | 212.4 KiB | 00m00s [ 14/150] Installing pcre2-syntax-0:10. 100% | 269.9 MiB/s | 276.4 KiB | 00m00s [ 15/150] Installing coreutils-common-0 100% | 398.3 MiB/s | 11.2 MiB | 00m00s [ 16/150] Installing ncurses-base-0:6.5 100% | 86.0 MiB/s | 352.2 KiB | 00m00s [ 17/150] Installing glibc-minimal-lang 100% | 0.0 B/s | 124.0 B | 00m00s [ 18/150] Installing ncurses-libs-0:6.5 100% | 232.6 MiB/s | 952.8 KiB | 00m00s [ 19/150] Installing glibc-0:2.41.9000- 100% | 222.1 MiB/s | 6.7 MiB | 00m00s [ 20/150] Installing bash-0:5.2.37-3.fc 100% | 292.2 MiB/s | 8.2 MiB | 00m00s [ 21/150] Installing glibc-common-0:2.4 100% | 68.0 MiB/s | 1.0 MiB | 00m00s [ 22/150] Installing glibc-gconv-extra- 100% | 270.8 MiB/s | 7.3 MiB | 00m00s [ 23/150] Installing zlib-ng-compat-0:2 100% | 135.2 MiB/s | 138.4 KiB | 00m00s [ 24/150] Installing xz-libs-1:5.6.3-3. 100% | 214.3 MiB/s | 219.4 KiB | 00m00s [ 25/150] Installing bzip2-libs-0:1.0.8 100% | 83.7 MiB/s | 85.7 KiB | 00m00s [ 26/150] Installing libuuid-0:2.40.4-7 100% | 0.0 B/s | 38.4 KiB | 00m00s [ 27/150] Installing libblkid-0:2.40.4- 100% | 257.2 MiB/s | 263.4 KiB | 00m00s [ 28/150] Installing readline-0:8.2-13. 100% | 237.8 MiB/s | 487.1 KiB | 00m00s [ 29/150] Installing libxcrypt-0:4.4.38 100% | 280.4 MiB/s | 287.2 KiB | 00m00s [ 30/150] Installing popt-0:1.19-8.fc42 100% | 68.1 MiB/s | 139.4 KiB | 00m00s [ 31/150] Installing libzstd-0:1.5.7-1. 100% | 395.1 MiB/s | 809.1 KiB | 00m00s [ 32/150] Installing elfutils-libelf-0: 100% | 390.1 MiB/s | 1.2 MiB | 00m00s [ 33/150] Installing gmp-1:6.3.0-3.fc43 100% | 401.1 MiB/s | 821.5 KiB | 00m00s [ 34/150] Installing libstdc++-0:15.0.1 100% | 401.2 MiB/s | 2.8 MiB | 00m00s [ 35/150] Installing libattr-0:2.5.2-5. 100% | 0.0 B/s | 28.1 KiB | 00m00s [ 36/150] Installing libacl-0:2.3.2-3.f 100% | 0.0 B/s | 39.2 KiB | 00m00s [ 37/150] Installing mpfr-0:4.2.1-6.fc4 100% | 407.0 MiB/s | 833.6 KiB | 00m00s [ 38/150] Installing gawk-0:5.3.1-1.fc4 100% | 105.9 MiB/s | 1.7 MiB | 00m00s [ 39/150] Installing dwz-0:0.15-9.fc42. 100% | 26.0 MiB/s | 292.4 KiB | 00m00s [ 40/150] Installing unzip-0:6.0-66.fc4 100% | 35.0 MiB/s | 393.8 KiB | 00m00s [ 41/150] Installing file-libs-0:5.46-1 100% | 741.1 MiB/s | 11.9 MiB | 00m00s [ 42/150] Installing file-0:5.46-1.fc42 100% | 6.2 MiB/s | 101.7 KiB | 00m00s [ 43/150] Installing crypto-policies-0: 100% | 39.9 MiB/s | 163.5 KiB | 00m00s [ 44/150] Installing libcap-ng-0:0.8.5- 100% | 73.1 MiB/s | 74.8 KiB | 00m00s [ 45/150] Installing audit-libs-0:4.0.3 100% | 345.1 MiB/s | 353.4 KiB | 00m00s [ 46/150] Installing libsmartcols-0:2.4 100% | 177.3 MiB/s | 181.5 KiB | 00m00s [ 47/150] Installing libeconf-0:0.7.6-1 100% | 0.0 B/s | 66.2 KiB | 00m00s [ 48/150] Installing pam-libs-0:1.7.0-4 100% | 126.1 MiB/s | 129.1 KiB | 00m00s [ 49/150] Installing libcap-0:2.73-2.fc 100% | 15.9 MiB/s | 212.1 KiB | 00m00s [ 50/150] Installing systemd-libs-0:257 100% | 374.0 MiB/s | 2.2 MiB | 00m00s [ 51/150] Installing libsepol-0:3.8-1.f 100% | 403.8 MiB/s | 827.0 KiB | 00m00s [ 52/150] Installing pcre2-0:10.45-1.fc 100% | 341.4 MiB/s | 699.1 KiB | 00m00s [ 53/150] Installing libselinux-0:3.8-1 100% | 189.8 MiB/s | 194.3 KiB | 00m00s [ 54/150] Installing grep-0:3.11-10.fc4 100% | 71.7 MiB/s | 1.0 MiB | 00m00s [ 55/150] Installing findutils-1:4.10.0 100% | 117.1 MiB/s | 1.9 MiB | 00m00s [ 56/150] Installing sed-0:4.9-4.fc42.x 100% | 60.4 MiB/s | 865.5 KiB | 00m00s [ 57/150] Installing xz-1:5.6.3-3.fc42. 100% | 81.9 MiB/s | 1.2 MiB | 00m00s [ 58/150] Installing libmount-0:2.40.4- 100% | 349.0 MiB/s | 357.4 KiB | 00m00s [ 59/150] Installing lz4-libs-0:1.10.0- 100% | 154.7 MiB/s | 158.5 KiB | 00m00s [ 60/150] Installing alternatives-0:1.3 100% | 6.0 MiB/s | 67.7 KiB | 00m00s [ 61/150] Installing lua-libs-0:5.4.7-3 100% | 271.5 MiB/s | 278.1 KiB | 00m00s [ 62/150] Installing libffi-0:3.4.7-1.f 100% | 0.0 B/s | 84.0 KiB | 00m00s [ 63/150] Installing libtasn1-0:4.20.0- 100% | 173.9 MiB/s | 178.1 KiB | 00m00s [ 64/150] Installing p11-kit-0:0.25.5-5 100% | 121.3 MiB/s | 2.2 MiB | 00m00s [ 65/150] Installing libunistring-0:1.1 100% | 431.7 MiB/s | 1.7 MiB | 00m00s [ 66/150] Installing libidn2-0:2.3.7-3. 100% | 163.6 MiB/s | 335.0 KiB | 00m00s [ 67/150] Installing libpsl-0:0.21.5-5. 100% | 0.0 B/s | 77.5 KiB | 00m00s [ 68/150] Installing p11-kit-trust-0:0. 100% | 22.8 MiB/s | 397.2 KiB | 00m00s [ 69/150] Installing openssl-libs-1:3.2 100% | 412.4 MiB/s | 7.8 MiB | 00m00s [ 70/150] Installing coreutils-0:9.6-2. 100% | 181.9 MiB/s | 5.5 MiB | 00m00s [ 71/150] Installing ca-certificates-0: 100% | 2.1 MiB/s | 2.4 MiB | 00m01s [ 72/150] Installing gzip-0:1.13-3.fc42 100% | 29.9 MiB/s | 398.4 KiB | 00m00s [ 73/150] Installing rpm-sequoia-0:1.7. 100% | 344.9 MiB/s | 2.4 MiB | 00m00s [ 74/150] Installing libevent-0:2.1.12- 100% | 295.2 MiB/s | 906.9 KiB | 00m00s [ 75/150] Installing zstd-0:1.5.7-1.fc4 100% | 114.0 MiB/s | 1.7 MiB | 00m00s [ 76/150] Installing util-linux-core-0: 100% | 89.2 MiB/s | 1.4 MiB | 00m00s [ 77/150] Installing tar-2:1.35-5.fc42. 100% | 164.6 MiB/s | 3.0 MiB | 00m00s [ 78/150] Installing libsemanage-0:3.8- 100% | 151.5 MiB/s | 310.2 KiB | 00m00s [ 79/150] Installing shadow-utils-2:4.1 100% | 148.8 MiB/s | 4.0 MiB | 00m00s [ 80/150] Installing systemd-standalone 100% | 24.7 MiB/s | 277.8 KiB | 00m00s [ 81/150] Installing zip-0:3.0-43.fc42. 100% | 52.8 MiB/s | 702.4 KiB | 00m00s [ 82/150] Installing libfdisk-0:2.40.4- 100% | 364.7 MiB/s | 373.5 KiB | 00m00s [ 83/150] Installing bzip2-0:1.0.8-20.f 100% | 9.2 MiB/s | 103.8 KiB | 00m00s [ 84/150] Installing libxml2-0:2.12.9-2 100% | 113.8 MiB/s | 1.7 MiB | 00m00s [ 85/150] Installing libarchive-0:3.7.7 100% | 303.6 MiB/s | 932.6 KiB | 00m00s [ 86/150] Installing add-determinism-0: 100% | 145.1 MiB/s | 2.5 MiB | 00m00s [ 87/150] Installing build-reproducibil 100% | 0.0 B/s | 1.0 KiB | 00m00s [ 88/150] Installing filesystem-srpm-ma 100% | 0.0 B/s | 38.9 KiB | 00m00s [ 89/150] Installing ed-0:1.21-2.fc42.x 100% | 13.2 MiB/s | 148.8 KiB | 00m00s [ 90/150] Installing patch-0:2.7.6-26.f 100% | 23.1 MiB/s | 260.2 KiB | 00m00s [ 91/150] Installing elfutils-default-y 100% | 408.6 KiB/s | 2.0 KiB | 00m00s [ 92/150] Installing elfutils-libs-0:0. 100% | 220.3 MiB/s | 676.7 KiB | 00m00s [ 93/150] Installing cpio-0:2.15-2.fc41 100% | 73.3 MiB/s | 1.1 MiB | 00m00s [ 94/150] Installing diffutils-0:3.10-9 100% | 99.4 MiB/s | 1.6 MiB | 00m00s [ 95/150] Installing libpkgconf-0:2.3.0 100% | 0.0 B/s | 79.2 KiB | 00m00s [ 96/150] Installing pkgconf-0:2.3.0-2. 100% | 8.1 MiB/s | 91.0 KiB | 00m00s [ 97/150] Installing jansson-0:2.14-2.f 100% | 92.2 MiB/s | 94.4 KiB | 00m00s [ 98/150] Installing sqlite-libs-0:3.49 100% | 381.0 MiB/s | 1.5 MiB | 00m00s [ 99/150] Installing rpm-libs-0:4.20.1- 100% | 353.2 MiB/s | 723.4 KiB | 00m00s [100/150] Installing libgomp-0:15.0.1-0 100% | 262.4 MiB/s | 537.3 KiB | 00m00s [101/150] Installing rpm-build-libs-0:4 100% | 202.6 MiB/s | 207.4 KiB | 00m00s [102/150] Installing json-c-0:0.18-2.fc 100% | 85.9 MiB/s | 88.0 KiB | 00m00s [103/150] Installing xxhash-libs-0:0.8. 100% | 89.4 MiB/s | 91.6 KiB | 00m00s [104/150] Installing libbrotli-0:1.1.0- 100% | 274.6 MiB/s | 843.6 KiB | 00m00s [105/150] Installing libnghttp2-0:1.65. 100% | 159.5 MiB/s | 163.3 KiB | 00m00s [106/150] Installing keyutils-libs-0:1. 100% | 0.0 B/s | 59.7 KiB | 00m00s [107/150] Installing libcom_err-0:1.47. 100% | 0.0 B/s | 68.2 KiB | 00m00s [108/150] Installing libverto-0:0.3.2-1 100% | 26.6 MiB/s | 27.2 KiB | 00m00s [109/150] Installing krb5-libs-0:1.21.3 100% | 328.5 MiB/s | 2.3 MiB | 00m00s [110/150] Installing libssh-0:0.11.1-4. 100% | 277.1 MiB/s | 567.5 KiB | 00m00s [111/150] Installing libtool-ltdl-0:2.5 100% | 0.0 B/s | 71.2 KiB | 00m00s [112/150] Installing gdbm-libs-1:1.23-9 100% | 128.5 MiB/s | 131.6 KiB | 00m00s [113/150] Installing cyrus-sasl-lib-0:2 100% | 135.5 MiB/s | 2.3 MiB | 00m00s [114/150] Installing openldap-0:2.6.9-3 100% | 214.5 MiB/s | 658.9 KiB | 00m00s [115/150] Installing libcurl-0:8.12.1-1 100% | 277.1 MiB/s | 851.2 KiB | 00m00s [116/150] Installing elfutils-debuginfo 100% | 7.0 MiB/s | 86.2 KiB | 00m00s [117/150] Installing binutils-0:2.44-3. 100% | 345.3 MiB/s | 25.9 MiB | 00m00s [118/150] Installing elfutils-0:0.192-8 100% | 149.3 MiB/s | 2.7 MiB | 00m00s [119/150] Installing gdb-minimal-0:16.2 100% | 316.6 MiB/s | 13.3 MiB | 00m00s [120/150] Installing debugedit-0:5.1-5. 100% | 17.3 MiB/s | 195.4 KiB | 00m00s [121/150] Installing curl-0:8.12.1-1.fc 100% | 23.6 MiB/s | 459.7 KiB | 00m00s [122/150] Installing rpm-0:4.20.1-1.fc4 100% | 104.1 MiB/s | 2.5 MiB | 00m00s [123/150] Installing efi-srpm-macros-0: 100% | 0.0 B/s | 41.1 KiB | 00m00s [124/150] Installing lua-srpm-macros-0: 100% | 0.0 B/s | 1.9 KiB | 00m00s [125/150] Installing tree-sitter-srpm-m 100% | 0.0 B/s | 7.4 KiB | 00m00s [126/150] Installing zig-srpm-macros-0: 100% | 0.0 B/s | 1.7 KiB | 00m00s [127/150] Installing pkgconf-m4-0:2.3.0 100% | 0.0 B/s | 14.8 KiB | 00m00s [128/150] Installing pkgconf-pkg-config 100% | 177.3 KiB/s | 1.8 KiB | 00m00s [129/150] Installing rust-srpm-macros-0 100% | 0.0 B/s | 5.6 KiB | 00m00s [130/150] Installing qt6-srpm-macros-0: 100% | 0.0 B/s | 740.0 B | 00m00s [131/150] Installing qt5-srpm-macros-0: 100% | 0.0 B/s | 776.0 B | 00m00s [132/150] Installing perl-srpm-macros-0 100% | 0.0 B/s | 1.1 KiB | 00m00s [133/150] Installing package-notes-srpm 100% | 0.0 B/s | 2.0 KiB | 00m00s [134/150] Installing openblas-srpm-macr 100% | 0.0 B/s | 392.0 B | 00m00s [135/150] Installing ocaml-srpm-macros- 100% | 0.0 B/s | 2.2 KiB | 00m00s [136/150] Installing kernel-srpm-macros 100% | 0.0 B/s | 2.3 KiB | 00m00s [137/150] Installing gnat-srpm-macros-0 100% | 0.0 B/s | 1.3 KiB | 00m00s [138/150] Installing ghc-srpm-macros-0: 100% | 0.0 B/s | 1.0 KiB | 00m00s [139/150] Installing fpc-srpm-macros-0: 100% | 0.0 B/s | 420.0 B | 00m00s [140/150] Installing ansible-srpm-macro 100% | 0.0 B/s | 36.2 KiB | 00m00s [141/150] Installing fonts-srpm-macros- 100% | 0.0 B/s | 57.0 KiB | 00m00s [142/150] Installing forge-srpm-macros- 100% | 0.0 B/s | 40.3 KiB | 00m00s [143/150] Installing go-srpm-macros-0:3 100% | 0.0 B/s | 62.0 KiB | 00m00s [144/150] Installing python-srpm-macros 100% | 0.0 B/s | 52.2 KiB | 00m00s [145/150] Installing redhat-rpm-config- 100% | 94.5 MiB/s | 193.5 KiB | 00m00s [146/150] Installing rpm-build-0:4.20.1 100% | 14.4 MiB/s | 177.4 KiB | 00m00s [147/150] Installing pyproject-srpm-mac 100% | 2.4 MiB/s | 2.5 KiB | 00m00s [148/150] Installing util-linux-0:2.40. 100% | 111.7 MiB/s | 3.5 MiB | 00m00s [149/150] Installing which-0:2.23-1.fc4 100% | 7.6 MiB/s | 85.6 KiB | 00m00s [150/150] Installing info-0:7.2-3.fc42. 100% | 240.1 KiB/s | 358.3 KiB | 00m01s Warning: skipped OpenPGP checks for 148 packages from repository: http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch Complete! Finish: installing minimal buildroot with dnf5 Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: add-determinism-0.6.0-1.fc43.x86_64 alternatives-1.31-3.fc42.x86_64 ansible-srpm-macros-1-17.1.fc42.noarch audit-libs-4.0.3-2.fc42.x86_64 bash-5.2.37-3.fc43.x86_64 binutils-2.44-3.fc43.x86_64 build-reproducibility-srpm-macros-0.6.0-1.fc43.noarch bzip2-1.0.8-20.fc42.x86_64 bzip2-libs-1.0.8-20.fc42.x86_64 ca-certificates-2024.2.69_v8.0.401-5.fc42.noarch coreutils-9.6-2.fc43.x86_64 coreutils-common-9.6-2.fc43.x86_64 cpio-2.15-2.fc41.x86_64 crypto-policies-20250214-1.gitff7551b.fc43.noarch curl-8.12.1-1.fc43.x86_64 cyrus-sasl-lib-2.1.28-30.fc42.x86_64 debugedit-5.1-5.fc43.x86_64 diffutils-3.10-9.fc42.x86_64 dwz-0.15-9.fc42.x86_64 ed-1.21-2.fc42.x86_64 efi-srpm-macros-6-2.fc42.noarch elfutils-0.192-8.fc42.x86_64 elfutils-debuginfod-client-0.192-8.fc42.x86_64 elfutils-default-yama-scope-0.192-8.fc42.noarch elfutils-libelf-0.192-8.fc42.x86_64 elfutils-libs-0.192-8.fc42.x86_64 fedora-gpg-keys-43-0.1.noarch fedora-release-43-0.6.noarch fedora-release-common-43-0.6.noarch fedora-release-identity-basic-43-0.6.noarch fedora-repos-43-0.1.noarch fedora-repos-rawhide-43-0.1.noarch file-5.46-1.fc42.x86_64 file-libs-5.46-1.fc42.x86_64 filesystem-3.18-38.fc43.x86_64 filesystem-srpm-macros-3.18-38.fc43.noarch findutils-4.10.0-5.fc42.x86_64 fonts-srpm-macros-2.0.5-21.fc42.noarch forge-srpm-macros-0.4.0-2.fc42.noarch fpc-srpm-macros-1.3-14.fc42.noarch gawk-5.3.1-1.fc42.x86_64 gdb-minimal-16.2-1.fc43.x86_64 gdbm-libs-1.23-9.fc42.x86_64 ghc-srpm-macros-1.9.2-2.fc42.noarch glibc-2.41.9000-2.fc43.x86_64 glibc-common-2.41.9000-2.fc43.x86_64 glibc-gconv-extra-2.41.9000-2.fc43.x86_64 glibc-minimal-langpack-2.41.9000-2.fc43.x86_64 gmp-6.3.0-3.fc43.x86_64 gnat-srpm-macros-6-7.fc42.noarch go-srpm-macros-3.6.0-6.fc42.noarch grep-3.11-10.fc42.x86_64 gzip-1.13-3.fc42.x86_64 info-7.2-3.fc42.x86_64 jansson-2.14-2.fc42.x86_64 json-c-0.18-2.fc42.x86_64 kernel-srpm-macros-1.0-25.fc42.noarch keyutils-libs-1.6.3-5.fc42.x86_64 krb5-libs-1.21.3-5.fc42.x86_64 libacl-2.3.2-3.fc42.x86_64 libarchive-3.7.7-3.fc43.x86_64 libattr-2.5.2-5.fc42.x86_64 libblkid-2.40.4-7.fc43.x86_64 libbrotli-1.1.0-6.fc42.x86_64 libcap-2.73-2.fc42.x86_64 libcap-ng-0.8.5-4.fc42.x86_64 libcom_err-1.47.2-3.fc42.x86_64 libcurl-8.12.1-1.fc43.x86_64 libeconf-0.7.6-1.fc43.x86_64 libevent-2.1.12-15.fc42.x86_64 libfdisk-2.40.4-7.fc43.x86_64 libffi-3.4.7-1.fc43.x86_64 libgcc-15.0.1-0.9.fc43.x86_64 libgomp-15.0.1-0.9.fc43.x86_64 libidn2-2.3.7-3.fc42.x86_64 libmount-2.40.4-7.fc43.x86_64 libnghttp2-1.65.0-1.fc43.x86_64 libpkgconf-2.3.0-2.fc42.x86_64 libpsl-0.21.5-5.fc42.x86_64 libselinux-3.8-1.fc42.x86_64 libsemanage-3.8-1.fc42.x86_64 libsepol-3.8-1.fc42.x86_64 libsmartcols-2.40.4-7.fc43.x86_64 libssh-0.11.1-4.fc42.x86_64 libssh-config-0.11.1-4.fc42.noarch libstdc++-15.0.1-0.9.fc43.x86_64 libtasn1-4.20.0-1.fc43.x86_64 libtool-ltdl-2.5.4-4.fc42.x86_64 libunistring-1.1-9.fc42.x86_64 libuuid-2.40.4-7.fc43.x86_64 libverto-0.3.2-10.fc42.x86_64 libxcrypt-4.4.38-6.fc43.x86_64 libxml2-2.12.9-2.fc42.x86_64 libzstd-1.5.7-1.fc43.x86_64 lua-libs-5.4.7-3.fc43.x86_64 lua-srpm-macros-1-15.fc42.noarch lz4-libs-1.10.0-2.fc42.x86_64 mpfr-4.2.1-6.fc42.x86_64 ncurses-base-6.5-5.20250125.fc42.noarch ncurses-libs-6.5-5.20250125.fc42.x86_64 ocaml-srpm-macros-10-4.fc42.noarch openblas-srpm-macros-2-19.fc42.noarch openldap-2.6.9-3.fc42.x86_64 openssl-libs-3.2.4-2.fc43.x86_64 p11-kit-0.25.5-5.fc42.x86_64 p11-kit-trust-0.25.5-5.fc42.x86_64 package-notes-srpm-macros-0.5-13.fc42.noarch pam-libs-1.7.0-4.fc42.x86_64 patch-2.7.6-26.fc42.x86_64 pcre2-10.45-1.fc43.x86_64 pcre2-syntax-10.45-1.fc43.noarch perl-srpm-macros-1-57.fc42.noarch pkgconf-2.3.0-2.fc42.x86_64 pkgconf-m4-2.3.0-2.fc42.noarch pkgconf-pkg-config-2.3.0-2.fc42.x86_64 popt-1.19-8.fc42.x86_64 publicsuffix-list-dafsa-20250116-1.fc42.noarch pyproject-srpm-macros-1.17.0-1.fc43.noarch python-srpm-macros-3.13-4.fc42.noarch qt5-srpm-macros-5.15.15-1.fc42.noarch qt6-srpm-macros-6.8.2-2.fc43.noarch readline-8.2-13.fc43.x86_64 redhat-rpm-config-342-2.fc42.noarch rpm-4.20.1-1.fc43.x86_64 rpm-build-4.20.1-1.fc43.x86_64 rpm-build-libs-4.20.1-1.fc43.x86_64 rpm-libs-4.20.1-1.fc43.x86_64 rpm-sequoia-1.7.0-5.fc43.x86_64 rust-srpm-macros-26.3-4.fc42.noarch sed-4.9-4.fc42.x86_64 setup-2.15.0-13.fc43.noarch shadow-utils-4.17.0-4.fc42.x86_64 sqlite-libs-3.49.0-1.fc43.x86_64 systemd-libs-257.3-7.fc43.x86_64 systemd-standalone-sysusers-257.3-7.fc43.x86_64 tar-1.35-5.fc42.x86_64 tree-sitter-srpm-macros-0.1.0-10.fc43.noarch unzip-6.0-66.fc42.x86_64 util-linux-2.40.4-7.fc43.x86_64 util-linux-core-2.40.4-7.fc43.x86_64 which-2.23-1.fc42.x86_64 xxhash-libs-0.8.3-2.fc42.x86_64 xz-5.6.3-3.fc42.x86_64 xz-libs-5.6.3-3.fc42.x86_64 zig-srpm-macros-1-4.fc42.noarch zip-3.0-43.fc42.x86_64 zlib-ng-compat-2.2.4-2.fc43.x86_64 zstd-1.5.7-1.fc43.x86_64 Start: buildsrpm Start: rpmbuild -bs Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1741219200 Wrote: /builddir/build/SRPMS/morphio-3.4.0-11.fc43.src.rpm Finish: rpmbuild -bs INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-x86_64-1741277852.552063/root/var/log/dnf5.log INFO: chroot_scan: creating tarball /var/lib/copr-rpmbuild/results/chroot_scan.tar.gz /bin/tar: Removing leading `/' from member names Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-4lkazkn_/morphio/morphio.spec) Config(child) 0 minutes 18 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/morphio-3.4.0-11.fc43.src.rpm) Config(fedora-rawhide-x86_64) Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1741277852.552063/root. INFO: reusing tmpfs at /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1741277852.552063/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-1741277852.552063/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.20.1-1.fc43.x86_64 rpm-sequoia-1.7.0-5.fc43.x86_64 dnf5-5.2.10.0-2.fc43.x86_64 dnf5-plugins-5.2.10.0-2.fc43.x86_64 Finish: chroot init Start: build phase for morphio-3.4.0-11.fc43.src.rpm Start: build setup for morphio-3.4.0-11.fc43.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1741219200 Wrote: /builddir/build/SRPMS/morphio-3.4.0-11.fc43.src.rpm Updating and loading repositories: fedora 100% | 819.5 KiB/s | 27.9 KiB | 00m00s Additional repo http_kojipkgs_fedorapr 100% | 182.3 KiB/s | 3.8 KiB | 00m00s Copr repository 100% | 95.7 KiB/s | 1.5 KiB | 00m00s Repositories loaded. Package Arch Version Repository Size Installing: boost-devel x86_64 1.83.0-12.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 143.0 MiB catch2-devel x86_64 2.13.10-6.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 952.9 KiB cmake x86_64 4.0.0~rc3-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 34.4 MiB gcc-c++ x86_64 15.0.1-0.9.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 40.8 MiB gsl-lite-devel x86_64 0.42.0-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 310.4 KiB gulrak-filesystem-devel x86_64 1.5.14-10.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 272.2 KiB hdf5-devel x86_64 1.14.6-3.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 3.3 MiB highfive-devel x86_64 2.10.0-4.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 377.1 KiB lexertl14-devel x86_64 1:0.1.0^20240506gitbca1359-4.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 573.8 KiB ninja-build x86_64 1.12.1-4.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 456.2 KiB pybind11-devel x86_64 2.13.6-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 847.8 KiB python3-devel x86_64 3.13.2-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.8 MiB tomcli noarch 0.9.0-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 140.3 KiB Installing dependencies: CharLS x86_64 2.4.2-8.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 334.0 KiB MUMPS x86_64 5.7.3-3.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 9.6 MiB MUMPS-common noarch 5.7.3-3.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 988.4 KiB OpenCL-ICD-Loader x86_64 3.0.6-2.20241023git5907ac1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 70.7 KiB abattis-cantarell-vf-fonts noarch 0.301-14.fc42 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thrift x86_64 0.20.0-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 4.8 MiB tomcli+tomlkit noarch 0.9.0-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 7.8 KiB tpm2-tss x86_64 4.1.3-6.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.6 MiB twolame-libs x86_64 0.4.0-6.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 165.5 KiB tzdata noarch 2025a-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.6 MiB unixODBC x86_64 2.3.12-6.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.0 MiB uriparser x86_64 0.9.8-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 137.7 KiB utf8proc x86_64 2.10.0-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 372.0 KiB vim-filesystem noarch 2:9.1.1122-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 40.0 B vo-amrwbenc x86_64 0.1.3-22.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 153.9 KiB vtk x86_64 9.2.6-37.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 101.5 MiB xcb-util x86_64 0.4.1-7.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 26.3 KiB xcb-util-image x86_64 0.4.1-7.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 22.2 KiB xcb-util-keysyms x86_64 0.4.1-7.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 16.7 KiB xcb-util-renderutil x86_64 0.3.10-7.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 24.4 KiB xcb-util-wm x86_64 0.4.2-7.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 81.2 KiB xerces-c x86_64 3.3.0-7.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 3.8 MiB xkeyboard-config noarch 2.44-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 6.6 MiB xml-common noarch 0.6.3-66.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 78.4 KiB xsimd-devel noarch 13.2.0-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.4 MiB xtensor-devel x86_64 0.25.0-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.9 MiB xtl-devel x86_64 0.7.7-4.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 768.3 KiB xvidcore x86_64 1.3.7-13.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 878.4 KiB zeromq x86_64 4.3.5-21.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 890.1 KiB zlib-ng x86_64 2.2.4-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 157.0 KiB zlib-ng-compat-devel x86_64 2.2.4-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 107.0 KiB zvbi x86_64 0.2.43-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.2 MiB Transaction Summary: Installing: 436 packages Total size of inbound packages is 437 MiB. Need to download 437 MiB. After this operation, 2 GiB extra will be used (install 2 GiB, remove 0 B). [ 1/436] catch2-devel-0:2.13.10-6.fc42 100% | 4.9 MiB/s | 197.0 KiB | 00m00s [ 2/436] gulrak-filesystem-devel-0:1.5 100% | 3.6 MiB/s | 59.7 KiB | 00m00s [ 3/436] cmake-0:4.0.0~rc3-1.fc43.x86_ 100% | 173.6 MiB/s | 12.2 MiB | 00m00s [ 4/436] boost-devel-0:1.83.0-12.fc42. 100% | 143.1 MiB/s | 11.7 MiB | 00m00s [ 5/436] gsl-lite-devel-0:0.42.0-2.fc4 100% | 2.4 MiB/s | 63.1 KiB | 00m00s [ 6/436] highfive-devel-0:2.10.0-4.fc4 100% | 5.2 MiB/s | 86.0 KiB | 00m00s [ 7/436] pybind11-devel-0:2.13.6-2.fc4 100% | 24.7 MiB/s | 176.8 KiB | 00m00s [ 8/436] lexertl14-devel-1:0.1.0^20240 100% | 13.5 MiB/s | 97.1 KiB | 00m00s [ 9/436] hdf5-devel-0:1.14.6-3.fc43.x8 100% | 130.8 MiB/s | 1.4 MiB | 00m00s [ 10/436] ninja-build-0:1.12.1-4.fc42.x 100% | 22.9 MiB/s | 187.8 KiB | 00m00s [ 11/436] python3-devel-0:3.13.2-2.fc43 100% | 38.9 MiB/s | 358.8 KiB | 00m00s [ 12/436] tomcli-0:0.9.0-1.fc43.noarch 100% | 11.9 MiB/s | 61.1 KiB | 00m00s [ 13/436] cmake-filesystem-0:4.0.0~rc3- 100% | 2.9 MiB/s | 17.8 KiB | 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113.1 KiB | 00m00s [359/436] libtirpc-0:1.3.6-1.rc3.fc42.2 100% | 18.7 MiB/s | 95.5 KiB | 00m00s [360/436] nss-softokn-0:3.109.0-1.fc43. 100% | 57.2 MiB/s | 410.4 KiB | 00m00s [361/436] nss-sysinit-0:3.109.0-1.fc43. 100% | 3.7 MiB/s | 19.2 KiB | 00m00s [362/436] nss-util-0:3.109.0-1.fc43.x86 100% | 16.7 MiB/s | 85.4 KiB | 00m00s [363/436] libzip-0:1.11.3-1.fc42.x86_64 100% | 13.7 MiB/s | 70.3 KiB | 00m00s [364/436] mariadb-connector-c-config-0: 100% | 1.8 MiB/s | 9.0 KiB | 00m00s [365/436] libwacom-data-0:2.14.0-2.fc42 100% | 30.8 MiB/s | 189.3 KiB | 00m00s [366/436] libdatrie-0:0.2.13-11.fc42.x8 100% | 6.3 MiB/s | 32.4 KiB | 00m00s [367/436] soxr-0:0.1.3-18.fc42.x86_64 100% | 16.9 MiB/s | 86.8 KiB | 00m00s [368/436] librttopo-0:1.1.0-16.fc42.x86 100% | 40.8 MiB/s | 208.7 KiB | 00m00s [369/436] libldb-2:4.22.0-0.18.rc4.fc43 100% | 36.8 MiB/s | 188.4 KiB | 00m00s [370/436] libtalloc-0:2.4.3-2.fc43.x86_ 100% | 8.5 MiB/s | 34.9 KiB | 00m00s [371/436] libtevent-0:0.16.2-2.fc43.x86 100% | 12.6 MiB/s | 51.4 KiB | 00m00s [372/436] libwbclient-2:4.22.0-0.18.rc4 100% | 11.7 MiB/s | 47.9 KiB | 00m00s [373/436] samba-common-2:4.22.0-0.18.rc 100% | 28.7 MiB/s | 176.1 KiB | 00m00s [374/436] samba-common-libs-2:4.22.0-0. 100% | 17.7 MiB/s | 108.8 KiB | 00m00s [375/436] cairo-gobject-0:1.18.2-3.fc42 100% | 3.4 MiB/s | 17.3 KiB | 00m00s [376/436] rsvg-pixbuf-loader-0:2.59.2-2 100% | 32.7 MiB/s | 167.6 KiB | 00m00s [377/436] cjson-0:1.7.18-2.fc42.x86_64 100% | 6.3 MiB/s | 32.2 KiB | 00m00s [378/436] mbedtls-0:2.28.8-1.fc41.x86_6 100% | 64.9 MiB/s | 398.9 KiB | 00m00s [379/436] samba-client-libs-2:4.22.0-0. 100% | 167.2 MiB/s | 5.5 MiB | 00m00s [380/436] mpg123-libs-0:1.32.9-2.fc42.x 100% | 31.7 MiB/s | 356.5 KiB | 00m00s [381/436] hwdata-0:0.393-1.fc43.noarch 100% | 109.1 MiB/s | 1.6 MiB | 00m00s [382/436] cliquer-libs-0:1.22-10.fc42.x 100% | 9.4 MiB/s | 38.4 KiB | 00m00s [383/436] libtdb-0:1.4.13-2.fc43.x86_64 100% | 10.7 MiB/s | 54.9 KiB | 00m00s [384/436] lmdb-libs-0:0.9.33-3.fc42.x86 100% | 15.2 MiB/s | 62.4 KiB | 00m00s [385/436] uriparser-0:0.9.8-3.fc42.x86_ 100% | 14.3 MiB/s | 58.5 KiB | 00m00s [386/436] highway-0:1.2.0-5.fc42.x86_64 100% | 87.3 MiB/s | 625.6 KiB | 00m00s [387/436] libgpg-error-0:1.51-2.fc42.x8 100% | 37.8 MiB/s | 232.1 KiB | 00m00s [388/436] shared-mime-info-0:2.3-7.fc42 100% | 48.1 MiB/s | 393.7 KiB | 00m00s [389/436] libudfread-0:1.1.2-11.fc42.x8 100% | 8.7 MiB/s | 35.5 KiB | 00m00s [390/436] libarrow-acero-libs-0:19.0.0- 100% | 71.8 MiB/s | 514.7 KiB | 00m00s [391/436] liborc2-0:2.1.0-1.fc43.x86_64 100% | 67.2 MiB/s | 550.3 KiB | 00m00s [392/436] re2-1:20240702-30.fc43.x86_64 100% | 36.9 MiB/s | 226.7 KiB | 00m00s [393/436] utf8proc-0:2.10.0-1.fc43.x86_ 100% | 13.3 MiB/s | 81.8 KiB | 00m00s [394/436] gpgme-0:1.24.2-1.fc43.x86_64 100% | 35.8 MiB/s | 219.7 KiB | 00m00s [395/436] libassuan-0:2.5.7-3.fc42.x86_ 100% | 11.0 MiB/s | 67.6 KiB | 00m00s [396/436] google-noto-fonts-common-0:20 100% | 3.3 MiB/s | 17.1 KiB | 00m00s [397/436] libksba-0:1.6.7-3.fc42.x86_64 100% | 31.6 MiB/s | 162.0 KiB | 00m00s [398/436] npth-0:1.8-2.fc42.x86_64 100% | 5.0 MiB/s | 25.8 KiB | 00m00s [399/436] gnupg2-0:2.4.7-2.fc42.x86_64 100% | 162.0 MiB/s | 2.8 MiB | 00m00s [400/436] zlib-ng-0:2.2.4-2.fc43.x86_64 100% | 16.9 MiB/s | 86.4 KiB | 00m00s [401/436] tpm2-tss-0:4.1.3-6.fc42.x86_6 100% | 37.4 MiB/s | 420.8 KiB | 00m00s [402/436] libusb1-0:1.0.27-8.fc42.x86_6 100% | 12.6 MiB/s | 77.4 KiB | 00m00s [403/436] abseil-cpp-0:20250127.0-1.fc4 100% | 76.8 MiB/s | 708.2 KiB | 00m00s [404/436] flexiblas-netlib64-0:3.4.5-1. 100% | 141.1 MiB/s | 3.2 MiB | 00m00s [405/436] openblas-openmp-0:0.3.29-1.fc 100% | 179.1 MiB/s | 5.4 MiB | 00m00s [406/436] nss-softokn-freebl-0:3.109.0- 100% | 29.1 MiB/s | 328.2 KiB | 00m00s [407/436] flexiblas-openblas-openmp64-0 100% | 1.9 MiB/s | 17.3 KiB | 00m00s [408/436] tomcli+tomlkit-0:0.9.0-1.fc43 100% | 2.1 MiB/s | 8.7 KiB | 00m00s [409/436] python3-tomlkit-0:0.13.2-2.fc 100% | 22.0 MiB/s | 112.7 KiB | 00m00s [410/436] hdf-libs-0:4.3.0-3.fc42.x86_6 100% | 35.9 MiB/s | 294.1 KiB | 00m00s [411/436] dbus-1:1.16.0-3.fc42.x86_64 100% | 1.3 MiB/s | 7.8 KiB | 00m00s [412/436] openblas-openmp64-0:0.3.29-1. 100% | 168.5 MiB/s | 5.2 MiB | 00m00s [413/436] libseccomp-0:2.5.5-2.fc41.x86 100% | 8.6 MiB/s | 70.2 KiB | 00m00s [414/436] systemd-0:257.3-7.fc43.x86_64 100% | 123.1 MiB/s | 3.9 MiB | 00m00s [415/436] systemd-pam-0:257.3-7.fc43.x8 100% | 37.0 MiB/s | 417.2 KiB | 00m00s [416/436] dbus-broker-0:36-5.fc42.x86_6 100% | 21.3 MiB/s | 174.1 KiB | 00m00s [417/436] systemd-shared-0:257.3-7.fc43 100% | 111.1 MiB/s | 1.8 MiB | 00m00s [418/436] dbus-common-1:1.16.0-3.fc42.n 100% | 2.4 MiB/s | 14.5 KiB | 00m00s [419/436] OpenCL-ICD-Loader-0:3.0.6-2.2 100% | 5.5 MiB/s | 28.2 KiB | 00m00s [420/436] cmake-rpm-macros-0:4.0.0~rc3- 100% | 3.4 MiB/s | 17.3 KiB | 00m00s [421/436] authselect-libs-0:1.5.1-1.fc4 100% | 40.0 MiB/s | 204.7 KiB | 00m00s [422/436] pam-0:1.7.0-4.fc42.x86_64 100% | 72.4 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100% | 22.6 MiB/s | 92.5 KiB | 00m00s [436/436] python3-packaging-0:24.2-3.fc 100% | 28.1 MiB/s | 143.8 KiB | 00m00s -------------------------------------------------------------------------------- [436/436] Total 100% | 235.9 MiB/s | 437.1 MiB | 00m02s Running transaction [ 1/438] Verify package files 100% | 336.0 B/s | 436.0 B | 00m01s [ 2/438] Prepare transaction 100% | 2.5 KiB/s | 436.0 B | 00m00s [ 3/438] Installing libpng-2:1.6.47-1. 100% | 233.4 MiB/s | 239.0 KiB | 00m00s [ 4/438] Installing cmake-filesystem-0 100% | 7.3 MiB/s | 7.5 KiB | 00m00s [ 5/438] Installing expat-0:2.6.4-2.fc 100% | 24.0 MiB/s | 294.9 KiB | 00m00s [ 6/438] Installing libjpeg-turbo-0:3. 100% | 393.0 MiB/s | 804.9 KiB | 00m00s [ 7/438] Installing libgfortran-0:15.0 100% | 470.4 MiB/s | 3.3 MiB | 00m00s [ 8/438] Installing libicu-0:76.1-4.fc 100% | 408.2 MiB/s | 36.3 MiB | 00m00s [ 9/438] Installing boost-system-0:1.8 100% | 0.0 B/s | 13.2 KiB | 00m00s [ 10/438] Installing boost-chrono-0:1.8 100% | 0.0 B/s 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| 87.2 MiB/s | 89.3 KiB | 00m00s [ 62/438] Installing shared-mime-info-0 100% | 112.0 MiB/s | 2.6 MiB | 00m00s [ 63/438] Installing gdk-pixbuf2-0:2.42 100% | 126.3 MiB/s | 2.5 MiB | 00m00s [ 64/438] Installing libunwind-0:1.8.1- 100% | 192.8 MiB/s | 197.4 KiB | 00m00s [ 65/438] Installing opus-0:1.5.2-2.fc4 100% | 418.6 MiB/s | 428.6 KiB | 00m00s [ 66/438] Installing lcms2-0:2.16-5.fc4 100% | 214.5 MiB/s | 439.3 KiB | 00m00s [ 67/438] Installing libdvdread-0:6.1.3 100% | 158.0 MiB/s | 161.8 KiB | 00m00s [ 68/438] Installing libevdev-0:1.13.3- 100% | 85.1 MiB/s | 87.1 KiB | 00m00s [ 69/438] Installing liblerc-0:4.0.0-8. 100% | 311.3 MiB/s | 637.6 KiB | 00m00s [ 70/438] Installing mesa-filesystem-0: 100% | 0.0 B/s | 4.3 KiB | 00m00s [ 71/438] Installing libwayland-server- 100% | 77.9 MiB/s | 79.8 KiB | 00m00s [ 72/438] Installing protobuf-0:3.19.6- 100% | 407.2 MiB/s | 3.3 MiB | 00m00s [ 73/438] Installing double-conversion- 100% | 97.0 MiB/s | 99.4 KiB | 00m00s [ 74/438] Installing dbus-libs-1:1.16.0 100% | 342.4 MiB/s | 350.6 KiB | 00m00s [ 75/438] Installing avahi-libs-0:0.9~r 100% | 181.8 MiB/s | 186.2 KiB | 00m00s [ 76/438] Installing libICE-0:1.1.2-2.f 100% | 195.1 MiB/s | 199.8 KiB | 00m00s [ 77/438] Installing tbb-0:2022.0.0-3.f 100% | 221.2 MiB/s | 453.1 KiB | 00m00s [ 78/438] Installing opencv-data-0:4.11 100% | 600.0 MiB/s | 10.2 MiB | 00m00s [ 79/438] Installing boost-program-opti 100% | 271.3 MiB/s | 277.8 KiB | 00m00s [ 80/438] Installing boost-date-time-0: 100% | 0.0 B/s | 13.2 KiB | 00m00s [ 81/438] Installing boost-container-0: 100% | 0.0 B/s | 66.4 KiB | 00m00s [ 82/438] Installing jsoncpp-0:1.9.6-1. 100% | 257.0 MiB/s | 263.1 KiB | 00m00s [ 83/438] Installing make-1:4.4.1-10.fc 100% | 112.5 MiB/s | 1.8 MiB | 00m00s [ 84/438] Installing vim-filesystem-2:9 100% | 4.6 MiB/s | 4.7 KiB | 00m00s [ 85/438] Installing emacs-filesystem-1 100% | 0.0 B/s | 544.0 B | 00m00s [ 86/438] Installing boost-json-0:1.83. 100% | 326.2 MiB/s | 334.1 KiB | 00m00s [ 87/438] Installing boost-wave-0:1.83. 100% | 418.6 MiB/s | 857.2 KiB | 00m00s [ 88/438] Installing libSM-0:1.2.5-2.fc 100% | 103.9 MiB/s | 106.4 KiB | 00m00s [ 89/438] Installing liborc2-0:2.1.0-1. 100% | 358.2 MiB/s | 1.8 MiB | 00m00s [ 90/438] Installing libdvdnav-0:6.1.1- 100% | 118.9 MiB/s | 121.7 KiB | 00m00s [ 91/438] Installing gdk-pixbuf2-module 100% | 125.4 MiB/s | 256.7 KiB | 00m00s [ 92/438] Installing graphene-0:1.10.6- 100% | 160.3 MiB/s | 164.1 KiB | 00m00s [ 93/438] Installing srt-libs-0:1.5.4-2 100% | 243.9 MiB/s | 998.9 KiB | 00m00s [ 94/438] Installing iso-codes-0:4.17.0 100% | 325.0 MiB/s | 20.5 MiB | 00m00s [ 95/438] Installing systemd-shared-0:2 100% | 386.9 MiB/s | 4.6 MiB | 00m00s [ 96/438] Installing pyproject-rpm-macr 100% | 113.2 MiB/s | 115.9 KiB | 00m00s [ 97/438] Installing boost-fiber-0:1.83 100% | 77.8 MiB/s | 79.7 KiB | 00m00s [ 98/438] Installing boost-log-0:1.83.0 100% | 371.6 MiB/s | 1.5 MiB | 00m00s [ 99/438] Installing boost-coroutine-0: 100% | 0.0 B/s | 22.1 KiB | 00m00s [100/438] Installing openblas-serial-0: 100% | 639.0 MiB/s | 41.5 MiB | 00m00s [101/438] Installing openblas-openmp-0: 100% | 642.9 MiB/s | 43.7 MiB | 00m00s [102/438] Installing flexiblas-0:3.4.5- 100% | 0.0 B/s | 51.6 KiB | 00m00s [103/438] Installing flexiblas-netlib-0 100% | 303.7 MiB/s | 10.9 MiB | 00m00s [104/438] Installing flexiblas-openblas 100% | 39.1 MiB/s | 40.1 KiB | 00m00s [105/438] Installing suitesparse-0:7.10 100% | 520.7 MiB/s | 45.8 MiB | 00m00s [106/438] Installing glpk-0:5.0-13.fc42 100% | 298.2 MiB/s | 915.9 KiB | 00m00s [107/438] Installing coin-or-CoinUtils- 100% | 307.5 MiB/s | 1.2 MiB | 00m00s [108/438] Installing coin-or-Osi-0:0.10 100% | 392.7 MiB/s | 5.9 MiB | 00m00s [109/438] Installing openblas-openmp64- 100% | 645.0 MiB/s | 43.9 MiB | 00m00s [110/438] Installing flexiblas-netlib64 100% | 306.0 MiB/s | 11.0 MiB | 00m00s [111/438] Installing flexiblas-openblas 100% | 0.0 B/s | 40.1 KiB | 00m00s [112/438] Installing arpack-0:3.9.1-6.f 100% | 316.5 MiB/s | 648.1 KiB | 00m00s [113/438] Installing armadillo-0:12.8.1 100% | 0.0 B/s | 83.8 KiB | 00m00s [114/438] Installing librttopo-0:1.1.0- 100% | 247.3 MiB/s | 506.5 KiB | 00m00s [115/438] Installing abattis-cantarell- 100% | 189.9 MiB/s | 194.4 KiB | 00m00s [116/438] Installing boost-graph-0:1.83 100% | 343.5 MiB/s | 351.7 KiB | 00m00s [117/438] Installing cpp-0:15.0.1-0.9.f 100% | 372.3 MiB/s | 37.6 MiB | 00m00s [118/438] Installing libwayland-cursor- 100% | 0.0 B/s | 38.4 KiB | 00m00s [119/438] Installing nss-softokn-freebl 100% | 276.8 MiB/s | 850.5 KiB | 00m00s [120/438] Installing nss-softokn-0:3.10 100% | 465.5 MiB/s | 1.9 MiB | 00m00s [121/438] Installing nss-sysinit-0:3.10 100% | 1.7 MiB/s | 19.2 KiB | 00m00s [122/438] Installing nss-0:3.109.0-1.fc 100% | 186.4 MiB/s | 1.9 MiB | 00m00s [123/438] Installing cgnslib-libs-0:4.5 100% | 295.9 MiB/s | 909.1 KiB | 00m00s [124/438] Installing libaec-devel-0:1.1 100% | 0.0 B/s | 13.5 KiB | 00m00s [125/438] Installing ogdi-0:4.1.1-5.fc4 100% | 54.5 MiB/s | 781.9 KiB | 00m00s [126/438] Installing libnsl2-0:2.0.1-3. 100% | 0.0 B/s | 59.0 KiB | 00m00s [127/438] Installing libksba-0:1.6.7-3. 100% | 197.8 MiB/s | 405.1 KiB | 00m00s [128/438] Installing boost-locale-0:1.8 100% | 300.2 MiB/s | 614.8 KiB | 00m00s [129/438] Installing boost-type_erasure 100% | 0.0 B/s | 55.2 KiB | 00m00s [130/438] Installing boost-timer-0:1.83 100% | 21.5 MiB/s | 22.0 KiB | 00m00s [131/438] Installing libicu-devel-0:76. 100% | 203.0 MiB/s | 5.1 MiB | 00m00s [132/438] Installing eigen3-devel-0:3.4 100% | 313.6 MiB/s | 8.5 MiB | 00m00s [133/438] Installing zlib-ng-compat-dev 100% | 106.0 MiB/s | 108.5 KiB | 00m00s [134/438] Installing xsimd-devel-0:13.2 100% | 357.1 MiB/s | 1.4 MiB | 00m00s [135/438] Installing xtl-devel-0:0.7.7- 100% | 378.2 MiB/s | 774.6 KiB | 00m00s [136/438] Installing xtensor-devel-0:0. 100% | 471.3 MiB/s | 1.9 MiB | 00m00s [137/438] Installing aribb24-0:1.0.3^20 100% | 81.3 MiB/s | 83.2 KiB | 00m00s [138/438] Installing zvbi-0:0.2.43-2.fc 100% | 59.4 MiB/s | 1.2 MiB | 00m00s [139/438] Installing libharu-0:2.4.3-7. 100% | 281.1 MiB/s | 1.7 MiB | 00m00s [140/438] Installing annobin-docs-0:12. 100% | 97.7 MiB/s | 100.0 KiB | 00m00s [141/438] Installing cracklib-0:2.9.11- 100% | 17.7 MiB/s | 253.7 KiB | 00m00s [142/438] Installing libpwquality-0:1.4 100% | 27.4 MiB/s | 421.6 KiB | 00m00s [143/438] Installing gdbm-1:1.23-9.fc42 100% | 34.9 MiB/s | 465.2 KiB | 00m00s [144/438] Installing authselect-libs-0: 100% | 205.1 MiB/s | 840.0 KiB | 00m00s [145/438] Installing OpenCL-ICD-Loader- 100% | 11.7 MiB/s | 71.8 KiB | 00m00s >>> Running unknown scriptlet: dbus-common-1:1.16.0-3.fc42.noarch >>> Finished unknown scriptlet: dbus-common-1:1.16.0-3.fc42.noarch >>> Scriptlet output: >>> Creating group 'dbus' with GID 81. >>> Creating user 'dbus' (System Message Bus) with UID 81 and GID 81. >>> [146/438] Installing dbus-common-1:1.16 100% | 1.5 MiB/s | 13.6 KiB | 00m00s [147/438] Installing dbus-broker-0:36-5 100% | 21.6 MiB/s | 397.6 KiB | 00m00s [148/438] Installing dbus-1:1.16.0-3.fc 100% | 0.0 B/s | 124.0 B | 00m00s [149/438] Installing systemd-pam-0:257. 100% | 74.2 MiB/s | 1.1 MiB | 00m00s >>> Running unknown scriptlet: systemd-0:257.3-7.fc43.x86_64 >>> Finished unknown scriptlet: systemd-0:257.3-7.fc43.x86_64 >>> Scriptlet output: >>> Creating group 'systemd-journal' with GID 190. >>> >>> Running unknown scriptlet: systemd-0:257.3-7.fc43.x86_64 >>> Finished unknown scriptlet: systemd-0:257.3-7.fc43.x86_64 >>> Scriptlet output: >>> Creating group 'systemd-oom' with GID 999. >>> Creating user 'systemd-oom' (systemd Userspace OOM Killer) with UID 999 and >>> [150/438] Installing systemd-0:257.3-7. 100% | 91.5 MiB/s | 12.3 MiB | 00m00s >>> Running unknown scriptlet: samba-common-2:4.22.0-0.18.rc4.fc43.noarch >>> Finished unknown scriptlet: samba-common-2:4.22.0-0.18.rc4.fc43.noarch >>> Scriptlet output: >>> Creating group 'printadmin' with GID 998. >>> [151/438] Installing samba-common-2:4.2 100% | 23.8 MiB/s | 195.4 KiB | 00m00s [152/438] Installing abseil-cpp-0:20250 100% | 214.1 MiB/s | 2.4 MiB | 00m00s [153/438] Installing re2-1:20240702-30. 100% | 280.9 MiB/s | 575.3 KiB | 00m00s [154/438] Installing libusb1-0:1.0.27-8 100% | 14.9 MiB/s | 168.2 KiB | 00m00s >>> Running unknown scriptlet: tpm2-tss-0:4.1.3-6.fc42.x86_64 >>> Finished unknown scriptlet: tpm2-tss-0:4.1.3-6.fc42.x86_64 >>> Scriptlet output: >>> Creating group 'tss' with GID 59. >>> Creating user 'tss' (Account used for TPM access) with UID 59 and GID 59. >>> [155/438] Installing tpm2-tss-0:4.1.3-6 100% | 261.3 MiB/s | 1.6 MiB | 00m00s [156/438] Installing npth-0:1.8-2.fc42. 100% | 49.5 MiB/s | 50.7 KiB | 00m00s [157/438] Installing gnupg2-0:2.4.7-2.f 100% | 258.0 MiB/s | 9.8 MiB | 00m00s [158/438] Installing gpgme-0:1.24.2-1.f 100% | 38.7 MiB/s | 593.9 KiB | 00m00s [159/438] Installing gpgmepp-0:1.24.2-1 100% | 420.2 MiB/s | 430.2 KiB | 00m00s [160/438] Installing google-noto-fonts- 100% | 0.0 B/s | 18.5 KiB | 00m00s [161/438] Installing google-noto-sans-v 100% | 347.8 MiB/s | 1.4 MiB | 00m00s [162/438] Installing default-fonts-core 100% | 17.8 MiB/s | 18.2 KiB | 00m00s [163/438] Installing utf8proc-0:2.10.0- 100% | 364.7 MiB/s | 373.4 KiB | 00m00s [164/438] Installing libarrow-0:19.0.0- 100% | 499.0 MiB/s | 25.0 MiB | 00m00s [165/438] Installing libarrow-acero-lib 100% | 346.4 MiB/s | 1.4 MiB | 00m00s [166/438] Installing libudfread-0:1.1.2 100% | 0.0 B/s | 67.3 KiB | 00m00s [167/438] Installing highway-0:1.2.0-5. 100% | 544.3 MiB/s | 4.4 MiB | 00m00s [168/438] Installing libjxl-1:0.11.1-2. 100% | 380.7 MiB/s | 3.0 MiB | 00m00s [169/438] Installing uriparser-0:0.9.8- 100% | 12.4 MiB/s | 139.8 KiB | 00m00s [170/438] Installing libkml-0:1.3.0-51. 100% | 303.3 MiB/s | 1.2 MiB | 00m00s [171/438] Installing lmdb-libs-0:0.9.33 100% | 104.3 MiB/s | 106.9 KiB | 00m00s [172/438] Installing libldb-2:4.22.0-0. 100% | 74.2 MiB/s | 455.8 KiB | 00m00s [173/438] Installing libwbclient-2:4.22 100% | 67.8 MiB/s | 69.4 KiB | 00m00s [174/438] Installing samba-client-libs- 100% | 382.0 MiB/s | 19.5 MiB | 00m00s [175/438] Installing samba-common-libs- 100% | 255.2 MiB/s | 261.4 KiB | 00m00s [176/438] Installing libsmbclient-2:4.2 100% | 161.3 MiB/s | 165.2 KiB | 00m00s [177/438] Installing cliquer-libs-0:1.2 100% | 71.5 MiB/s | 73.2 KiB | 00m00s [178/438] Installing libnauty-0:2.8.9-3 100% | 535.3 MiB/s | 4.8 MiB | 00m00s [179/438] Installing mpg123-libs-0:1.32 100% | 265.7 MiB/s | 816.2 KiB | 00m00s [180/438] Installing libopenmpt-0:0.7.1 100% | 329.9 MiB/s | 1.6 MiB | 00m00s [181/438] Installing hwdata-0:0.393-1.f 100% | 554.8 MiB/s | 9.4 MiB | 00m00s [182/438] Installing libpciaccess-0:0.1 100% | 44.8 MiB/s | 45.9 KiB | 00m00s [183/438] Installing libdrm-0:2.4.124-2 100% | 201.1 MiB/s | 411.8 KiB | 00m00s [184/438] Installing mbedtls-0:2.28.8-1 100% | 356.9 MiB/s | 1.1 MiB | 00m00s [185/438] Installing cjson-0:1.7.18-2.f 100% | 4.9 MiB/s | 65.3 KiB | 00m00s [186/438] Installing librist-0:0.2.7-8. 100% | 155.1 MiB/s | 158.8 KiB | 00m00s [187/438] Installing soxr-0:0.1.3-18.fc 100% | 189.1 MiB/s | 193.6 KiB | 00m00s [188/438] Installing libdatrie-0:0.2.13 100% | 0.0 B/s | 58.9 KiB | 00m00s [189/438] Installing libthai-0:0.1.29-1 100% | 191.7 MiB/s | 785.2 KiB | 00m00s [190/438] Installing libwacom-data-0:2. 100% | 108.1 MiB/s | 1.4 MiB | 00m00s [191/438] Installing mariadb-connector- 100% | 0.0 B/s | 1.0 KiB | 00m00s [192/438] Installing mariadb-connector- 100% | 252.9 MiB/s | 517.9 KiB | 00m00s [193/438] Installing libzip-0:1.11.3-1. 100% | 133.7 MiB/s | 137.0 KiB | 00m00s [194/438] Installing netcdf-0:4.9.2-13. 100% | 123.7 MiB/s | 2.4 MiB | 00m00s [195/438] Installing libdicom-0:1.1.0-4 100% | 491.6 MiB/s | 503.4 KiB | 00m00s [196/438] Installing fribidi-0:1.0.16-2 100% | 16.0 MiB/s | 196.8 KiB | 00m00s [197/438] Installing thrift-0:0.20.0-3. 100% | 200.7 MiB/s | 4.8 MiB | 00m00s [198/438] Installing parquet-libs-0:19. 100% | 413.3 MiB/s | 3.3 MiB | 00m00s [199/438] Installing libarrow-dataset-l 100% | 366.6 MiB/s | 1.5 MiB | 00m00s [200/438] Installing poppler-data-0:0.4 100% | 387.2 MiB/s | 12.4 MiB | 00m00s [201/438] Installing proj-data-0:9.5.1- 100% | 570.9 MiB/s | 9.1 MiB | 00m00s [202/438] Installing cpuinfo-0:24.09.26 100% | 9.8 MiB/s | 120.0 KiB | 00m00s [203/438] Installing svt-av1-libs-0:2.3 100% | 401.7 MiB/s | 5.6 MiB | 00m00s [204/438] Installing pugixml-0:1.14-2.f 100% | 261.8 MiB/s | 268.1 KiB | 00m00s [205/438] Installing openpgm-0:5.3.128- 100% | 310.3 MiB/s | 317.7 KiB | 00m00s [206/438] Installing libsodium-0:1.0.20 100% | 381.0 MiB/s | 390.2 KiB | 00m00s [207/438] Installing zeromq-0:4.3.5-21. 100% | 63.0 MiB/s | 902.7 KiB | 00m00s [208/438] Installing scotch-0:7.0.6-2.f 100% | 242.3 MiB/s | 744.3 KiB | 00m00s [209/438] Installing metis-0:5.1.0.3-7. 100% | 68.7 MiB/s | 984.6 KiB | 00m00s [210/438] Installing pixman-0:0.44.2-2. 100% | 329.7 MiB/s | 675.3 KiB | 00m00s [211/438] Installing lpcnetfreedv-0:0.5 100% | 592.9 MiB/s | 14.8 MiB | 00m00s [212/438] Installing codec2-0:1.2.0-6.f 100% | 342.3 MiB/s | 1.4 MiB | 00m00s [213/438] Installing MUMPS-common-0:5.7 100% | 483.1 MiB/s | 989.4 KiB | 00m00s [214/438] Installing MUMPS-0:5.7.3-3.fc 100% | 482.6 MiB/s | 9.7 MiB | 00m00s [215/438] Installing coin-or-Clp-0:1.17 100% | 146.2 MiB/s | 2.6 MiB | 00m00s [216/438] Installing coin-or-Cgl-0:0.60 100% | 347.9 MiB/s | 1.0 MiB | 00m00s [217/438] Installing coin-or-Cbc-0:2.10 100% | 107.5 MiB/s | 2.5 MiB | 00m00s >>> Running post-install scriptlet: coin-or-Cbc-0:2.10.12-6.fc42.x86_64 >>> Finished post-install scriptlet: coin-or-Cbc-0:2.10.12-6.fc42.x86_64 >>> Scriptlet output: >>> reading /var/lib/alternatives/CoinCbc >>> [218/438] Installing cups-filesystem-1: 100% | 1.7 MiB/s | 1.8 KiB | 00m00s [219/438] Installing cups-libs-1:2.4.11 100% | 302.9 MiB/s | 620.2 KiB | 00m00s [220/438] Installing xerces-c-0:3.3.0-7 100% | 419.3 MiB/s | 3.8 MiB | 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lexertl14-devel-1: 100% | 190.6 MiB/s | 585.5 KiB | 00m00s [438/438] Installing systemd-rpm-macros 100% | 23.0 KiB/s | 11.3 KiB | 00m00s Warning: skipped OpenPGP checks for 436 packages from repositories: copr_base, http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch Complete! Finish: build setup for morphio-3.4.0-11.fc43.src.rpm Start: rpmbuild morphio-3.4.0-11.fc43.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1741219200 Executing(%mkbuilddir): /bin/sh -e /var/tmp/rpm-tmp.atseIv Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.ZnsDYQ + umask 022 + cd /builddir/build/BUILD/morphio-3.4.0-build + cd /builddir/build/BUILD/morphio-3.4.0-build + rm -rf MorphIO-3.4.0 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/MorphIO-3.4.0.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd MorphIO-3.4.0 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/stop-them-using-a-random-env-var.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/remove-upstreams-flags.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/install-python-shared-object.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/0001-Downstream-only-Allow-passing-CMake-defs-through-an-.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/pytest-float32.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/use-lib_install_dir.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/allow_use_of_external_ghc_filesystem.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/dont_use_cmake_for_finding_ghc_filesystem.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/515.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/1.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/3.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/512.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + rm -rvf 3rdparty/GSL_LITE removed directory '3rdparty/GSL_LITE' + sed -r -i /GSL_LITE/d MANIFEST.in + sed -r -i '/director.*\(.*(gsl-lite|GSL_LITE).*\)/d' 3rdparty/CMakeLists.txt + sed -r -i -e /TARGET_PROPERTY:gsl-lite,INTERFACE_INCLUDE_DIRECTORIES/d -e 's/PUBLIC[[:blank:]]+gsl-lite[[:blank:]]+(PRIVATE)/\1/' src/CMakeLists.txt + grep -ErIl '#[[:blank:]]*include[[:blank:]]+["<]gsl/gsl[">]' . + xargs -r sed -r -i 's@(#[[:blank:]]*include[[:blank:]]+["<]gsl/gsl)([">])@\1-lite\.hpp\2@' + rm -rvf 3rdparty/lexertl + ln -s /usr/include/lexertl 3rdparty/ + find . -type f -name .gitignore -print -delete ./.gitignore ./doc/source/doxygen/.gitignore + tomcli set pyproject.toml lists delitem --type regex --no-first build-system.requires '^(cmake|ninja)$' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.wEzcVc + umask 022 + cd /builddir/build/BUILD/morphio-3.4.0-build + cd MorphIO-3.4.0 + export SETUPTOOLS_SCM_PRETEND_VERSION=3.4.0 + SETUPTOOLS_SCM_PRETEND_VERSION=3.4.0 + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(packaging)' + echo 'python3dist(pip) >= 19' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/.pyproject-builddir + RPM_TOXENV=py313 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/pyproject-wheeldir --output /builddir/build/BUILD/morphio-3.4.0-build/morphio-3.4.0-11.fc43.x86_64-pyproject-buildrequires tests/requirement_tests.txt Handling h5py>=2.9.0 from requirements file tests/requirement_tests.txt Requirement not satisfied: h5py>=2.9.0 Handling pytest>=6.0 from requirements file tests/requirement_tests.txt Requirement not satisfied: pytest>=6.0 Handling numpy>=1.14.2 from requirements file tests/requirement_tests.txt Requirement satisfied: numpy>=1.14.2 (installed: numpy 2.2.3) Exiting dependency generation pass: all requirements files + cat /builddir/build/BUILD/morphio-3.4.0-build/morphio-3.4.0-11.fc43.x86_64-pyproject-buildrequires + rm -rfv '*.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/morphio-3.4.0-11.fc43.buildreqs.nosrc.rpm INFO: Going to install missing dynamic buildrequires Updating and loading repositories: fedora 100% | 960.8 KiB/s | 27.9 KiB | 00m00s Additional repo http_kojipkgs_fedorapr 100% | 159.5 KiB/s | 3.8 KiB | 00m00s Copr repository 100% | 95.7 KiB/s | 1.5 KiB | 00m00s Repositories loaded. Package "boost-devel-1.83.0-12.fc42.x86_64" is already installed. Package "cmake-4.0.0~rc3-1.fc43.x86_64" is already installed. Package "catch2-devel-2.13.10-6.fc42.x86_64" is already installed. Package "gulrak-filesystem-devel-1.5.14-10.fc42.x86_64" is already installed. Package "gsl-lite-devel-0.42.0-2.fc42.x86_64" is already installed. Package "highfive-devel-2.10.0-4.fc42.x86_64" is already installed. Package "pybind11-devel-2.13.6-2.fc42.x86_64" is already installed. Package "gcc-c++-15.0.1-0.9.fc43.x86_64" is already installed. Package "gsl-lite-devel-0.42.0-2.fc42.x86_64" is already installed. Package "gulrak-filesystem-devel-1.5.14-10.fc42.x86_64" is already installed. Package "hdf5-devel-1.14.6-3.fc43.x86_64" is already installed. Package "highfive-devel-2.10.0-4.fc42.x86_64" is already installed. Package "lexertl14-devel-1:0.1.0^20240506gitbca1359-4.fc42.x86_64" is already installed. Package "lexertl14-devel-1:0.1.0^20240506gitbca1359-4.fc42.x86_64" is already installed. Package "ninja-build-1.12.1-4.fc42.x86_64" is already installed. Package "pybind11-devel-2.13.6-2.fc42.x86_64" is already installed. Package "pyproject-rpm-macros-1.17.0-1.fc43.noarch" is already installed. Package "python3-devel-3.13.2-2.fc43.x86_64" is already installed. Package "python3-numpy-1:2.2.3-1.fc43.x86_64" is already installed. Package "python3-packaging-24.2-3.fc42.noarch" is already installed. Package "tomcli-0.9.0-1.fc43.noarch" is already installed. Package Arch Version Repository Size Installing: python3-h5py x86_64 3.12.1-6.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 4.4 MiB python3-pip noarch 24.3.1-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 11.3 MiB python3-pytest noarch 8.3.4-3.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 20.8 MiB Installing dependencies: liblzf x86_64 3.6-32.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 49.5 KiB python3-cached_property noarch 2.0.1-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 34.8 KiB python3-iniconfig noarch 1.1.1-25.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 20.6 KiB python3-pluggy noarch 1.5.0-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 192.7 KiB python3-six noarch 1.17.0-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 116.9 KiB Transaction Summary: Installing: 8 packages Total size of inbound packages is 6 MiB. Need to download 6 MiB. After this operation, 37 MiB extra will be used (install 37 MiB, remove 0 B). [1/8] python3-h5py-0:3.12.1-6.fc43.x86_ 100% | 30.5 MiB/s | 1.1 MiB | 00m00s [2/8] python3-pytest-0:8.3.4-3.fc43.noa 100% | 51.8 MiB/s | 2.0 MiB | 00m00s [3/8] python3-iniconfig-0:1.1.1-25.fc42 100% | 2.2 MiB/s | 18.1 KiB | 00m00s [4/8] python3-pluggy-0:1.5.0-2.fc42.noa 100% | 7.4 MiB/s | 53.4 KiB | 00m00s [5/8] liblzf-0:3.6-32.fc42.x86_64 100% | 6.8 MiB/s | 27.8 KiB | 00m00s [6/8] python3-cached_property-0:2.0.1-2 100% | 4.9 MiB/s | 20.0 KiB | 00m00s [7/8] python3-six-0:1.17.0-2.fc42.noarc 100% | 8.1 MiB/s | 41.3 KiB | 00m00s [8/8] python3-pip-0:24.3.1-2.fc42.noarc 100% | 33.1 MiB/s | 2.5 MiB | 00m00s -------------------------------------------------------------------------------- [8/8] Total 100% | 75.6 MiB/s | 5.8 MiB | 00m00s Running transaction [ 1/10] Verify package files 100% | 470.0 B/s | 8.0 B | 00m00s [ 2/10] Prepare transaction 100% | 160.0 B/s | 8.0 B | 00m00s [ 3/10] Installing python3-six-0:1.17.0 100% | 116.2 MiB/s | 119.0 KiB | 00m00s [ 4/10] Installing python3-cached_prope 100% | 36.6 MiB/s | 37.5 KiB | 00m00s [ 5/10] Installing liblzf-0:3.6-32.fc42 100% | 4.2 MiB/s | 51.9 KiB | 00m00s [ 6/10] Installing python3-pluggy-0:1.5 100% | 194.3 MiB/s | 199.0 KiB | 00m00s [ 7/10] Installing python3-iniconfig-0: 100% | 23.0 MiB/s | 23.5 KiB | 00m00s [ 8/10] Installing python3-pytest-0:8.3 100% | 362.2 MiB/s | 21.0 MiB | 00m00s [ 9/10] Installing python3-h5py-0:3.12. 100% | 293.4 MiB/s | 4.4 MiB | 00m00s [10/10] Installing python3-pip-0:24.3.1 100% | 121.0 MiB/s | 11.6 MiB | 00m00s Warning: skipped OpenPGP checks for 8 packages from repository: http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch Complete! Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1741219200 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.5m56bO + umask 022 + cd /builddir/build/BUILD/morphio-3.4.0-build + cd MorphIO-3.4.0 + export SETUPTOOLS_SCM_PRETEND_VERSION=3.4.0 + SETUPTOOLS_SCM_PRETEND_VERSION=3.4.0 + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(packaging)' + echo 'python3dist(pip) >= 19' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/.pyproject-builddir + RPM_TOXENV=py313 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/pyproject-wheeldir --output /builddir/build/BUILD/morphio-3.4.0-build/morphio-3.4.0-11.fc43.x86_64-pyproject-buildrequires tests/requirement_tests.txt Handling h5py>=2.9.0 from requirements file tests/requirement_tests.txt Requirement satisfied: h5py>=2.9.0 (installed: h5py 3.12.1) Handling pytest>=6.0 from requirements file tests/requirement_tests.txt Requirement satisfied: pytest>=6.0 (installed: pytest 8.3.4) Handling numpy>=1.14.2 from requirements file tests/requirement_tests.txt Requirement satisfied: numpy>=1.14.2 (installed: numpy 2.2.3) Handling setuptools>=24.2.0 from build-system.requires Requirement not satisfied: setuptools>=24.2.0 Handling wheel from build-system.requires Requirement not satisfied: wheel Handling setuptools >= 40.8 from default build backend Requirement not satisfied: setuptools >= 40.8 Exiting dependency generation pass: build backend + cat /builddir/build/BUILD/morphio-3.4.0-build/morphio-3.4.0-11.fc43.x86_64-pyproject-buildrequires + rm -rfv '*.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/morphio-3.4.0-11.fc43.buildreqs.nosrc.rpm INFO: Going to install missing dynamic buildrequires Updating and loading repositories: fedora 100% | 96.4 KiB/s | 27.9 KiB | 00m00s Additional repo http_kojipkgs_fedorapr 100% | 191.5 KiB/s | 3.8 KiB | 00m00s Copr repository 100% | 72.9 KiB/s | 1.5 KiB | 00m00s Repositories loaded. Package "boost-devel-1.83.0-12.fc42.x86_64" is already installed. Package "cmake-4.0.0~rc3-1.fc43.x86_64" is already installed. Package "catch2-devel-2.13.10-6.fc42.x86_64" is already installed. Package "gulrak-filesystem-devel-1.5.14-10.fc42.x86_64" is already installed. Package "gsl-lite-devel-0.42.0-2.fc42.x86_64" is already installed. Package "highfive-devel-2.10.0-4.fc42.x86_64" is already installed. Package "pybind11-devel-2.13.6-2.fc42.x86_64" is already installed. Package "gcc-c++-15.0.1-0.9.fc43.x86_64" is already installed. Package "gsl-lite-devel-0.42.0-2.fc42.x86_64" is already installed. Package "gulrak-filesystem-devel-1.5.14-10.fc42.x86_64" is already installed. Package "hdf5-devel-1.14.6-3.fc43.x86_64" is already installed. Package "highfive-devel-2.10.0-4.fc42.x86_64" is already installed. Package "lexertl14-devel-1:0.1.0^20240506gitbca1359-4.fc42.x86_64" is already installed. Package "lexertl14-devel-1:0.1.0^20240506gitbca1359-4.fc42.x86_64" is already installed. Package "ninja-build-1.12.1-4.fc42.x86_64" is already installed. Package "pybind11-devel-2.13.6-2.fc42.x86_64" is already installed. Package "pyproject-rpm-macros-1.17.0-1.fc43.noarch" is already installed. Package "python3-devel-3.13.2-2.fc43.x86_64" is already installed. Package "python3-h5py-3.12.1-6.fc43.x86_64" is already installed. Package "python3-numpy-1:2.2.3-1.fc43.x86_64" is already installed. Package "python3-packaging-24.2-3.fc42.noarch" is already installed. Package "python3-pip-24.3.1-2.fc42.noarch" is already installed. Package "python3-pytest-8.3.4-3.fc43.noarch" is already installed. Package "tomcli-0.9.0-1.fc43.noarch" is already installed. Package Arch Version Repository Size Installing: python3-setuptools noarch 74.1.3-5.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 8.4 MiB python3-wheel noarch 1:0.45.1-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 541.9 KiB Transaction Summary: Installing: 2 packages Total size of inbound packages is 2 MiB. Need to download 2 MiB. After this operation, 9 MiB extra will be used (install 9 MiB, remove 0 B). [1/2] python3-wheel-1:0.45.1-3.fc42.noa 100% | 5.6 MiB/s | 159.2 KiB | 00m00s [2/2] python3-setuptools-0:74.1.3-5.fc4 100% | 28.8 MiB/s | 1.8 MiB | 00m00s -------------------------------------------------------------------------------- [2/2] Total 100% | 30.8 MiB/s | 2.0 MiB | 00m00s Running transaction [1/4] Verify package files 100% | 333.0 B/s | 2.0 B | 00m00s [2/4] Prepare transaction 100% | 83.0 B/s | 2.0 B | 00m00s [3/4] Installing python3-wheel-1:0.45.1 100% | 34.3 MiB/s | 562.0 KiB | 00m00s [4/4] Installing python3-setuptools-0:7 100% | 117.3 MiB/s | 8.6 MiB | 00m00s Warning: skipped OpenPGP checks for 2 packages from repository: http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch Complete! Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1741219200 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.V6RcuK + umask 022 + cd /builddir/build/BUILD/morphio-3.4.0-build + cd MorphIO-3.4.0 + export SETUPTOOLS_SCM_PRETEND_VERSION=3.4.0 + SETUPTOOLS_SCM_PRETEND_VERSION=3.4.0 + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(packaging)' + echo 'python3dist(pip) >= 19' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/.pyproject-builddir + RPM_TOXENV=py313 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/pyproject-wheeldir --output /builddir/build/BUILD/morphio-3.4.0-build/morphio-3.4.0-11.fc43.x86_64-pyproject-buildrequires tests/requirement_tests.txt Handling h5py>=2.9.0 from requirements file tests/requirement_tests.txt Requirement satisfied: h5py>=2.9.0 (installed: h5py 3.12.1) Handling pytest>=6.0 from requirements file tests/requirement_tests.txt Requirement satisfied: pytest>=6.0 (installed: pytest 8.3.4) Handling numpy>=1.14.2 from requirements file tests/requirement_tests.txt Requirement satisfied: numpy>=1.14.2 (installed: numpy 2.2.3) Handling setuptools>=24.2.0 from build-system.requires Requirement satisfied: setuptools>=24.2.0 (installed: setuptools 74.1.3) Handling wheel from build-system.requires Requirement satisfied: wheel (installed: wheel 0.45.1) Handling setuptools >= 40.8 from default build backend Requirement satisfied: setuptools >= 40.8 (installed: setuptools 74.1.3) Handling setuptools_scm from get_requires_for_build_wheel Requirement not satisfied: setuptools_scm Exiting dependency generation pass: get_requires_for_build_wheel + cat /builddir/build/BUILD/morphio-3.4.0-build/morphio-3.4.0-11.fc43.x86_64-pyproject-buildrequires + rm -rfv '*.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/morphio-3.4.0-11.fc43.buildreqs.nosrc.rpm INFO: Going to install missing dynamic buildrequires Updating and loading repositories: fedora 100% | 928.8 KiB/s | 27.9 KiB | 00m00s Additional repo http_kojipkgs_fedorapr 100% | 166.5 KiB/s | 3.8 KiB | 00m00s Copr repository 100% | 95.7 KiB/s | 1.5 KiB | 00m00s Repositories loaded. Package "boost-devel-1.83.0-12.fc42.x86_64" is already installed. Package "cmake-4.0.0~rc3-1.fc43.x86_64" is already installed. Package "catch2-devel-2.13.10-6.fc42.x86_64" is already installed. Package "gulrak-filesystem-devel-1.5.14-10.fc42.x86_64" is already installed. Package "gsl-lite-devel-0.42.0-2.fc42.x86_64" is already installed. Package "highfive-devel-2.10.0-4.fc42.x86_64" is already installed. Package "pybind11-devel-2.13.6-2.fc42.x86_64" is already installed. Package "gcc-c++-15.0.1-0.9.fc43.x86_64" is already installed. Package "gsl-lite-devel-0.42.0-2.fc42.x86_64" is already installed. Package "gulrak-filesystem-devel-1.5.14-10.fc42.x86_64" is already installed. Package "hdf5-devel-1.14.6-3.fc43.x86_64" is already installed. Package "highfive-devel-2.10.0-4.fc42.x86_64" is already installed. Package "lexertl14-devel-1:0.1.0^20240506gitbca1359-4.fc42.x86_64" is already installed. Package "lexertl14-devel-1:0.1.0^20240506gitbca1359-4.fc42.x86_64" is already installed. Package "ninja-build-1.12.1-4.fc42.x86_64" is already installed. Package "pybind11-devel-2.13.6-2.fc42.x86_64" is already installed. Package "pyproject-rpm-macros-1.17.0-1.fc43.noarch" is already installed. Package "python3-devel-3.13.2-2.fc43.x86_64" is already installed. Package "python3-h5py-3.12.1-6.fc43.x86_64" is already installed. Package "python3-numpy-1:2.2.3-1.fc43.x86_64" is already installed. Package "python3-packaging-24.2-3.fc42.noarch" is already installed. Package "python3-pip-24.3.1-2.fc42.noarch" is already installed. Package "python3-pytest-8.3.4-3.fc43.noarch" is already installed. Package "python3-setuptools-74.1.3-5.fc42.noarch" is already installed. Package "python3-setuptools-74.1.3-5.fc42.noarch" is already installed. Package "python3-wheel-1:0.45.1-3.fc42.noarch" is already installed. Package "tomcli-0.9.0-1.fc43.noarch" is already installed. Package Arch Version Repository Size Installing: python3-setuptools_scm noarch 8.1.0-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 319.6 KiB Transaction Summary: Installing: 1 package Total size of inbound packages is 102 KiB. Need to download 102 KiB. After this operation, 320 KiB extra will be used (install 320 KiB, remove 0 B). [1/1] python3-setuptools_scm-0:8.1.0-2. 100% | 4.5 MiB/s | 101.7 KiB | 00m00s -------------------------------------------------------------------------------- [1/1] Total 100% | 4.5 MiB/s | 101.7 KiB | 00m00s Running transaction [1/3] Verify package files 100% | 0.0 B/s | 1.0 B | 00m00s [2/3] Prepare transaction 100% | 52.0 B/s | 1.0 B | 00m00s [3/3] Installing python3-setuptools_scm 100% | 9.0 MiB/s | 339.3 KiB | 00m00s Warning: skipped OpenPGP checks for 1 package from repository: http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch Complete! Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1741219200 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.ChMnPW + umask 022 + cd /builddir/build/BUILD/morphio-3.4.0-build + cd MorphIO-3.4.0 + export SETUPTOOLS_SCM_PRETEND_VERSION=3.4.0 + SETUPTOOLS_SCM_PRETEND_VERSION=3.4.0 + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(packaging)' + echo 'python3dist(pip) >= 19' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/.pyproject-builddir + RPM_TOXENV=py313 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/pyproject-wheeldir --output /builddir/build/BUILD/morphio-3.4.0-build/morphio-3.4.0-11.fc43.x86_64-pyproject-buildrequires tests/requirement_tests.txt Handling h5py>=2.9.0 from requirements file tests/requirement_tests.txt Requirement satisfied: h5py>=2.9.0 (installed: h5py 3.12.1) Handling pytest>=6.0 from requirements file tests/requirement_tests.txt Requirement satisfied: pytest>=6.0 (installed: pytest 8.3.4) Handling numpy>=1.14.2 from requirements file tests/requirement_tests.txt Requirement satisfied: numpy>=1.14.2 (installed: numpy 2.2.3) Handling setuptools>=24.2.0 from build-system.requires Requirement satisfied: setuptools>=24.2.0 (installed: setuptools 74.1.3) Handling wheel from build-system.requires Requirement satisfied: wheel (installed: wheel 0.45.1) Handling setuptools >= 40.8 from default build backend Requirement satisfied: setuptools >= 40.8 (installed: setuptools 74.1.3) Handling setuptools_scm from get_requires_for_build_wheel Requirement satisfied: setuptools_scm (installed: setuptools_scm 8.1.0) WARNING setuptools_scm.pyproject_reading toml section missing 'pyproject.toml does not contain a tool.setuptools_scm section' Traceback (most recent call last): File "/usr/lib/python3.13/site-packages/setuptools_scm/_integration/pyproject_reading.py", line 36, in read_pyproject section = defn.get("tool", {})[tool_name] ~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^ KeyError: 'setuptools_scm' running dist_info creating morphio.egg-info writing morphio.egg-info/PKG-INFO writing dependency_links to morphio.egg-info/dependency_links.txt writing requirements to morphio.egg-info/requires.txt writing top-level names to morphio.egg-info/top_level.txt writing manifest file 'morphio.egg-info/SOURCES.txt' reading manifest file 'morphio.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching '3rdparty/HighFive/CMakeLists.txt' warning: no files found matching '*' under directory '3rdparty/HighFive/include' warning: no files found matching '*' under directory '3rdparty/HighFive/CMake' warning: no files found matching '*' under directory '3rdparty/HighFive/doc' warning: no files found matching '3rdparty/lexertl14/CMakeLists.txt' warning: no files found matching '*' under directory '3rdparty/lexertl14/include/lexertl' warning: no files found matching '*' under directory 'binds/python/pybind11/include' warning: no files found matching '*.cmake' under directory 'binds/python/pybind11/tools' warning: no files found matching 'binds/python/pybind11/CMakeLists.txt' warning: no files found matching 'binds/python/pybind11/LICENSE' no previously-included directories found matching 'ci' no previously-included directories found matching 'doc' no previously-included directories found matching 'scripts' no previously-included directories found matching 'examples' adding license file 'LICENSE.txt' adding license file 'AUTHORS.txt' writing manifest file 'morphio.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/morphio-3.4.0.dist-info' Handling numpy>=1.14.1 from hook generated metadata: Requires-Dist (morphio) Requirement satisfied: numpy>=1.14.1 (installed: numpy 2.2.3) Handling sphinx-bluebrain-theme; extra == "docs" from hook generated metadata: Requires-Dist (morphio) Ignoring alien requirement: sphinx-bluebrain-theme; extra == "docs" + cat /builddir/build/BUILD/morphio-3.4.0-build/morphio-3.4.0-11.fc43.x86_64-pyproject-buildrequires + rm -rfv morphio-3.4.0.dist-info/ removed 'morphio-3.4.0.dist-info/top_level.txt' removed 'morphio-3.4.0.dist-info/METADATA' removed 'morphio-3.4.0.dist-info/LICENSE.txt' removed 'morphio-3.4.0.dist-info/AUTHORS.txt' removed directory 'morphio-3.4.0.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/morphio-3.4.0-11.fc43.buildreqs.nosrc.rpm INFO: Going to install missing dynamic buildrequires Updating and loading repositories: fedora 100% | 95.8 KiB/s | 27.9 KiB | 00m00s Copr repository 100% | 127.6 KiB/s | 1.5 KiB | 00m00s Additional repo http_kojipkgs_fedorapr 100% | 147.3 KiB/s | 3.8 KiB | 00m00s Repositories loaded. Nothing to do. Package "boost-devel-1.83.0-12.fc42.x86_64" is already installed. Package "cmake-4.0.0~rc3-1.fc43.x86_64" is already installed. Package "catch2-devel-2.13.10-6.fc42.x86_64" is already installed. Package "gulrak-filesystem-devel-1.5.14-10.fc42.x86_64" is already installed. Package "gsl-lite-devel-0.42.0-2.fc42.x86_64" is already installed. Package "highfive-devel-2.10.0-4.fc42.x86_64" is already installed. Package "pybind11-devel-2.13.6-2.fc42.x86_64" is already installed. Package "gcc-c++-15.0.1-0.9.fc43.x86_64" is already installed. Package "gsl-lite-devel-0.42.0-2.fc42.x86_64" is already installed. Package "gulrak-filesystem-devel-1.5.14-10.fc42.x86_64" is already installed. Package "hdf5-devel-1.14.6-3.fc43.x86_64" is already installed. Package "highfive-devel-2.10.0-4.fc42.x86_64" is already installed. Package "lexertl14-devel-1:0.1.0^20240506gitbca1359-4.fc42.x86_64" is already installed. Package "lexertl14-devel-1:0.1.0^20240506gitbca1359-4.fc42.x86_64" is already installed. Package "ninja-build-1.12.1-4.fc42.x86_64" is already installed. Package "pybind11-devel-2.13.6-2.fc42.x86_64" is already installed. Package "pyproject-rpm-macros-1.17.0-1.fc43.noarch" is already installed. Package "python3-devel-3.13.2-2.fc43.x86_64" is already installed. Package "python3-h5py-3.12.1-6.fc43.x86_64" is already installed. Package "python3-numpy-1:2.2.3-1.fc43.x86_64" is already installed. Package "python3-numpy-1:2.2.3-1.fc43.x86_64" is already installed. Package "python3-packaging-24.2-3.fc42.noarch" is already installed. Package "python3-pip-24.3.1-2.fc42.noarch" is already installed. Package "python3-pytest-8.3.4-3.fc43.noarch" is already installed. Package "python3-setuptools-74.1.3-5.fc42.noarch" is already installed. Package "python3-setuptools-74.1.3-5.fc42.noarch" is already installed. Package "python3-setuptools_scm-8.1.0-2.fc42.noarch" is already installed. Package "python3-wheel-1:0.45.1-3.fc42.noarch" is already installed. Package "tomcli-0.9.0-1.fc43.noarch" is already installed. Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1741219200 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.8zSNvH + umask 022 + cd /builddir/build/BUILD/morphio-3.4.0-build + cd MorphIO-3.4.0 + export SETUPTOOLS_SCM_PRETEND_VERSION=3.4.0 + SETUPTOOLS_SCM_PRETEND_VERSION=3.4.0 + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(packaging)' + echo 'python3dist(pip) >= 19' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/.pyproject-builddir + RPM_TOXENV=py313 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/pyproject-wheeldir --output /builddir/build/BUILD/morphio-3.4.0-build/morphio-3.4.0-11.fc43.x86_64-pyproject-buildrequires tests/requirement_tests.txt Handling h5py>=2.9.0 from requirements file tests/requirement_tests.txt Requirement satisfied: h5py>=2.9.0 (installed: h5py 3.12.1) Handling pytest>=6.0 from requirements file tests/requirement_tests.txt Requirement satisfied: pytest>=6.0 (installed: pytest 8.3.4) Handling numpy>=1.14.2 from requirements file tests/requirement_tests.txt Requirement satisfied: numpy>=1.14.2 (installed: numpy 2.2.3) Handling setuptools>=24.2.0 from build-system.requires Requirement satisfied: setuptools>=24.2.0 (installed: setuptools 74.1.3) Handling wheel from build-system.requires Requirement satisfied: wheel (installed: wheel 0.45.1) Handling setuptools >= 40.8 from default build backend Requirement satisfied: setuptools >= 40.8 (installed: setuptools 74.1.3) Handling setuptools_scm from get_requires_for_build_wheel Requirement satisfied: setuptools_scm (installed: setuptools_scm 8.1.0) WARNING setuptools_scm.pyproject_reading toml section missing 'pyproject.toml does not contain a tool.setuptools_scm section' Traceback (most recent call last): File "/usr/lib/python3.13/site-packages/setuptools_scm/_integration/pyproject_reading.py", line 36, in read_pyproject section = defn.get("tool", {})[tool_name] ~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^ KeyError: 'setuptools_scm' running dist_info writing morphio.egg-info/PKG-INFO writing dependency_links to morphio.egg-info/dependency_links.txt writing requirements to morphio.egg-info/requires.txt writing top-level names to morphio.egg-info/top_level.txt reading manifest file 'morphio.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching '3rdparty/HighFive/CMakeLists.txt' warning: no files found matching '*' under directory '3rdparty/HighFive/include' warning: no files found matching '*' under directory '3rdparty/HighFive/CMake' warning: no files found matching '*' under directory '3rdparty/HighFive/doc' warning: no files found matching '3rdparty/lexertl14/CMakeLists.txt' warning: no files found matching '*' under directory '3rdparty/lexertl14/include/lexertl' warning: no files found matching '*' under directory 'binds/python/pybind11/include' warning: no files found matching '*.cmake' under directory 'binds/python/pybind11/tools' warning: no files found matching 'binds/python/pybind11/CMakeLists.txt' warning: no files found matching 'binds/python/pybind11/LICENSE' no previously-included directories found matching 'ci' no previously-included directories found matching 'doc' no previously-included directories found matching 'scripts' no previously-included directories found matching 'examples' adding license file 'LICENSE.txt' adding license file 'AUTHORS.txt' writing manifest file 'morphio.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/morphio-3.4.0.dist-info' Handling numpy>=1.14.1 from hook generated metadata: Requires-Dist (morphio) Requirement satisfied: numpy>=1.14.1 (installed: numpy 2.2.3) Handling sphinx-bluebrain-theme; extra == "docs" from hook generated metadata: Requires-Dist (morphio) Ignoring alien requirement: sphinx-bluebrain-theme; extra == "docs" + cat /builddir/build/BUILD/morphio-3.4.0-build/morphio-3.4.0-11.fc43.x86_64-pyproject-buildrequires + rm -rfv morphio-3.4.0.dist-info/ removed 'morphio-3.4.0.dist-info/top_level.txt' removed 'morphio-3.4.0.dist-info/METADATA' removed 'morphio-3.4.0.dist-info/LICENSE.txt' removed 'morphio-3.4.0.dist-info/AUTHORS.txt' removed directory 'morphio-3.4.0.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.XS43JD + umask 022 + cd /builddir/build/BUILD/morphio-3.4.0-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd MorphIO-3.4.0 + export SETUPTOOLS_SCM_PRETEND_VERSION=3.4.0 + SETUPTOOLS_SCM_PRETEND_VERSION=3.4.0 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + /usr/bin/cmake -S . -B redhat-linux-build -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_DO_STRIP:BOOL=OFF -DCMAKE_INSTALL_PREFIX:PATH=/usr -DCMAKE_INSTALL_FULL_SBINDIR:PATH=/usr/bin -DCMAKE_INSTALL_SBINDIR:PATH=bin -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -DBUILD_BINDINGS:BOOL=FALSE -DEXTERNAL_CATCH2:BOOL=TRUE -DEXTERNAL_GHC_FILESYSTEM:BOOL=TRUE -DEXTERNAL_HIGHFIVE:BOOL=TRUE -DEXTERNAL_PYBIND11:BOOL=TRUE -DMORPHIO_ENABLE_COVERAGE:BOOL=FALSE -DMORPHIO_TESTS:BOOL=TRUE -DMORPHIO_USE_DOUBLE:BOOL=TRUE -DMORPHIO_VERSION_STRING:STRING=3.4.0 -DMorphIO_CXX_WARNINGS:BOOL=FALSE -GNinja -Wno-dev -- The C compiler identification is GNU 15.0.1 -- The CXX compiler identification is GNU 15.0.1 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done Floating Point Type: double -- HIGHFIVE 2.10.0: (Re)Detecting Highfive dependencies (HIGHFIVE_USE_INSTALL_DEPS=NO) -- Found HDF5: /usr/lib64/libhdf5.so (found version "1.14.6") -- Found Boost: /usr/include (found version "1.83.0") found components: system serialization -- Found PythonInterp: /usr/bin/python3 (found suitable version "3.13.2", minimum required is "3.7") -- Found PythonLibs: /usr/lib64/libpython3.13.so -- Performing Test HAS_FLTO -- Performing Test HAS_FLTO - Success -- Found pybind11: /usr/include (found version "2.13.6") -- Configuring done (0.8s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_CXX_FLAGS_RELEASE CMAKE_C_FLAGS_RELEASE CMAKE_Fortran_FLAGS_RELEASE CMAKE_INSTALL_DO_STRIP INCLUDE_INSTALL_DIR LIB_SUFFIX SHARE_INSTALL_PREFIX SYSCONF_INSTALL_DIR -- Build files have been written to: /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/redhat-linux-build + /usr/bin/cmake --build redhat-linux-build -j4 --verbose Change Dir: '/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/redhat-linux-build' Run Build Command(s): /usr/bin/ninja-build -v -j 4 [1/55] /usr/bin/g++ -DMORPHIO_USE_DOUBLE -I/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0 -I/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/src/../include -isystem /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/3rdparty/lexertl14/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++14 -fPIC -MD -MT src/CMakeFiles/morphio_obj.dir/enums.cpp.o -MF src/CMakeFiles/morphio_obj.dir/enums.cpp.o.d -o src/CMakeFiles/morphio_obj.dir/enums.cpp.o -c /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/src/enums.cpp [2/55] /usr/bin/g++ -DMORPHIO_USE_DOUBLE -I/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0 -I/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/src/../include -isystem /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/3rdparty/lexertl14/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++14 -fPIC -MD -MT src/CMakeFiles/morphio_obj.dir/endoplasmic_reticulum.cpp.o -MF src/CMakeFiles/morphio_obj.dir/endoplasmic_reticulum.cpp.o.d -o 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src/CMakeFiles/morphio_obj.dir/glial_cell.cpp.o -MF src/CMakeFiles/morphio_obj.dir/glial_cell.cpp.o.d -o src/CMakeFiles/morphio_obj.dir/glial_cell.cpp.o -c /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/src/glial_cell.cpp [6/55] /usr/bin/g++ -DMORPHIO_USE_DOUBLE -I/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0 -I/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/src/../include -isystem /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/3rdparty/lexertl14/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++14 -fPIC -MD -MT src/CMakeFiles/morphio_obj.dir/mito_section.cpp.o -MF src/CMakeFiles/morphio_obj.dir/mito_section.cpp.o.d -o src/CMakeFiles/morphio_obj.dir/mito_section.cpp.o -c /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/src/mito_section.cpp [7/55] /usr/bin/g++ -DMORPHIO_USE_DOUBLE -I/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0 -I/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/src/../include -isystem /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/3rdparty/lexertl14/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++14 -fPIC -MD -MT src/CMakeFiles/morphio_obj.dir/error_message_generation.cpp.o -MF src/CMakeFiles/morphio_obj.dir/error_message_generation.cpp.o.d -o src/CMakeFiles/morphio_obj.dir/error_message_generation.cpp.o -c /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/src/error_message_generation.cpp [8/55] /usr/bin/g++ -DMORPHIO_USE_DOUBLE -I/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0 -I/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/src/../include -isystem /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/3rdparty/lexertl14/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer 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mcd=EXTERNAL_GHC_FILESYSTEM:BOOL=TRUE,MORPHIO_USE_DOUBLE:BOOL=TRUE,MorphIO_CXX_WARNINGS:BOOL=FALSE,EXTERNAL_HIGHFIVE:BOOL=TRUE,EXTERNAL_PYBIND11:BOOL=TRUE,CMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG,CMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG,CMAKE_VERBOSE_MAKEFILE:BOOL=ON,CMAKE_INSTALL_DO_STRIP:BOOL=OFF,CMAKE_STRIP=/bin/true + export MORPHIO_CMAKE_DEFS=EXTERNAL_GHC_FILESYSTEM:BOOL=TRUE,MORPHIO_USE_DOUBLE:BOOL=TRUE,MorphIO_CXX_WARNINGS:BOOL=FALSE,EXTERNAL_HIGHFIVE:BOOL=TRUE,EXTERNAL_PYBIND11:BOOL=TRUE,CMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG,CMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG,CMAKE_VERBOSE_MAKEFILE:BOOL=ON,CMAKE_INSTALL_DO_STRIP:BOOL=OFF,CMAKE_STRIP=/bin/true + MORPHIO_CMAKE_DEFS=EXTERNAL_GHC_FILESYSTEM:BOOL=TRUE,MORPHIO_USE_DOUBLE:BOOL=TRUE,MorphIO_CXX_WARNINGS:BOOL=FALSE,EXTERNAL_HIGHFIVE:BOOL=TRUE,EXTERNAL_PYBIND11:BOOL=TRUE,CMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG,CMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG,CMAKE_VERBOSE_MAKEFILE:BOOL=ON,CMAKE_INSTALL_DO_STRIP:BOOL=OFF,CMAKE_STRIP=/bin/true + mkdir -p /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/.pyproject-builddir + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/.pyproject-builddir + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_wheel.py /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/pyproject-wheeldir Processing /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0 Preparing metadata (pyproject.toml): started Running command Preparing metadata (pyproject.toml) WARNING setuptools_scm.pyproject_reading toml section missing 'pyproject.toml does not contain a tool.setuptools_scm section' Traceback (most recent call last): File "/usr/lib/python3.13/site-packages/setuptools_scm/_integration/pyproject_reading.py", line 36, in read_pyproject section = defn.get("tool", {})[tool_name] ~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^ KeyError: 'setuptools_scm' running dist_info creating /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/.pyproject-builddir/pip-modern-metadata-giy6_at1/morphio.egg-info writing /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/.pyproject-builddir/pip-modern-metadata-giy6_at1/morphio.egg-info/PKG-INFO writing dependency_links to /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/.pyproject-builddir/pip-modern-metadata-giy6_at1/morphio.egg-info/dependency_links.txt writing requirements to /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/.pyproject-builddir/pip-modern-metadata-giy6_at1/morphio.egg-info/requires.txt writing top-level names to /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/.pyproject-builddir/pip-modern-metadata-giy6_at1/morphio.egg-info/top_level.txt writing manifest file '/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/.pyproject-builddir/pip-modern-metadata-giy6_at1/morphio.egg-info/SOURCES.txt' reading manifest file '/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/.pyproject-builddir/pip-modern-metadata-giy6_at1/morphio.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching '3rdparty/HighFive/CMakeLists.txt' warning: no files found matching '*' under directory '3rdparty/HighFive/include' warning: no files found matching '*' under directory '3rdparty/HighFive/CMake' warning: no files found matching '*' under directory '3rdparty/HighFive/doc' warning: no files found matching '3rdparty/lexertl14/CMakeLists.txt' warning: no files found matching '*' under directory '3rdparty/lexertl14/include/lexertl' warning: no files found matching '*' under directory 'binds/python/pybind11/include' warning: no files found matching '*.cmake' under directory 'binds/python/pybind11/tools' warning: no files found matching 'binds/python/pybind11/CMakeLists.txt' warning: no files found matching 'binds/python/pybind11/LICENSE' no previously-included directories found matching 'ci' no previously-included directories found matching 'doc' no previously-included directories found matching 'scripts' no previously-included directories found matching 'examples' adding license file 'LICENSE.txt' adding license file 'AUTHORS.txt' writing manifest file '/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/.pyproject-builddir/pip-modern-metadata-giy6_at1/morphio.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/.pyproject-builddir/pip-modern-metadata-giy6_at1/morphio-3.4.0.dist-info' Preparing metadata (pyproject.toml): finished with status 'done' Building wheels for collected packages: morphio Building wheel for morphio (pyproject.toml): started Running command Building wheel for morphio (pyproject.toml) WARNING setuptools_scm.pyproject_reading toml section missing 'pyproject.toml does not contain a tool.setuptools_scm section' Traceback (most recent call last): File "/usr/lib/python3.13/site-packages/setuptools_scm/_integration/pyproject_reading.py", line 36, in read_pyproject section = defn.get("tool", {})[tool_name] ~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^ KeyError: 'setuptools_scm' running bdist_wheel running build running build_py creating build creating build/lib.linux-x86_64-cpython-313 creating build/lib.linux-x86_64-cpython-313/morphio copying morphio/__init__.py -> build/lib.linux-x86_64-cpython-313/morphio creating build/lib.linux-x86_64-cpython-313/morphio/mut copying morphio/mut/__init__.py -> build/lib.linux-x86_64-cpython-313/morphio/mut creating build/lib.linux-x86_64-cpython-313/morphio/vasculature copying morphio/vasculature/__init__.py -> build/lib.linux-x86_64-cpython-313/morphio/vasculature running build_ext -- The C compiler identification is GNU 15.0.1 -- The CXX compiler identification is GNU 15.0.1 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done Floating Point Type: double -- HIGHFIVE 2.10.0: (Re)Detecting Highfive dependencies (HIGHFIVE_USE_INSTALL_DEPS=NO) -- Found HDF5: /usr/lib64/libhdf5.so (found version "1.14.6") CMake Warning (dev) at /usr/lib64/cmake/HighFive/HighFiveTargetDeps.cmake:55 (find_package): Policy CMP0167 is not set: The FindBoost module is removed. Run "cmake --help-policy CMP0167" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): /usr/lib64/cmake/HighFive/HighFiveConfig.cmake:93 (include) CMakeLists.txt:42 (find_package) This warning is for project developers. Use -Wno-dev to suppress it. -- Found Boost: /usr/include (found version "1.83.0") found components: system serialization CMake Warning (dev) at /usr/share/cmake/pybind11/FindPythonLibsNew.cmake:101 (message): Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules are removed. Run "cmake --help-policy CMP0148" for policy details. Use the cmake_policy command to set the policy and suppress this warning, or preferably upgrade to using FindPython, either by calling it explicitly before pybind11, or by setting PYBIND11_FINDPYTHON ON before pybind11. Call Stack (most recent call first): /usr/share/cmake/pybind11/pybind11Tools.cmake:50 (find_package) /usr/share/cmake/pybind11/pybind11Common.cmake:228 (include) /usr/share/cmake/pybind11/pybind11Config.cmake:250 (include) CMakeLists.txt:45 (find_package) This warning is for project developers. Use -Wno-dev to suppress it. -- Found PythonInterp: /usr/bin/python3 (found suitable version "3.13.2", minimum required is "3.7") -- Found PythonLibs: /usr/lib64/libpython3.13.so -- Performing Test HAS_FLTO -- Performing Test HAS_FLTO - Success -- Found pybind11: /usr/include (found version "2.13.6") -- Warning: this does not have an effect - use NO_SYSTEM_FROM_IMPORTED if using imported targets -- Found Python3: /usr/bin/python3.13 (found version "3.13.2") found components: Interpreter -- Configuring done (1.1s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_C_FLAGS_RELEASE CMAKE_INSTALL_DO_STRIP HIGHFIVE_EXAMPLES HIGHFIVE_UNIT_TESTS -- Build files have been written to: /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/build/temp.linux-x86_64-cpython-313 Change Dir: '/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/build/temp.linux-x86_64-cpython-313' Run Build Command(s): /usr/bin/ninja-build -v _morphio [1/48] /usr/bin/g++ -DMORPHIO_USE_DOUBLE -I/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0 -I/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/src/../include -isystem /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/3rdparty/lexertl14/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++14 -fPIC -MD -MT src/CMakeFiles/morphio_obj.dir/enums.cpp.o -MF src/CMakeFiles/morphio_obj.dir/enums.cpp.o.d -o src/CMakeFiles/morphio_obj.dir/enums.cpp.o -c /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/src/enums.cpp [2/48] /usr/bin/g++ -DMORPHIO_USE_DOUBLE -I/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0 -I/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/src/../include -isystem /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/3rdparty/lexertl14/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++14 -fPIC -MD -MT src/CMakeFiles/morphio_obj.dir/endoplasmic_reticulum.cpp.o -MF src/CMakeFiles/morphio_obj.dir/endoplasmic_reticulum.cpp.o.d -o src/CMakeFiles/morphio_obj.dir/endoplasmic_reticulum.cpp.o -c /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/src/endoplasmic_reticulum.cpp [3/48] /usr/bin/g++ -DMORPHIO_USE_DOUBLE -I/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0 -I/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/src/../include -isystem /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/3rdparty/lexertl14/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++14 -fPIC -MD -MT src/CMakeFiles/morphio_obj.dir/errorMessages.cpp.o -MF src/CMakeFiles/morphio_obj.dir/errorMessages.cpp.o.d -o src/CMakeFiles/morphio_obj.dir/errorMessages.cpp.o -c /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/src/errorMessages.cpp [4/48] /usr/bin/g++ -DMORPHIO_USE_DOUBLE -I/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0 -I/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/src/../include -isystem /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/3rdparty/lexertl14/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++14 -fPIC -MD -MT src/CMakeFiles/morphio_obj.dir/dendritic_spine.cpp.o -MF src/CMakeFiles/morphio_obj.dir/dendritic_spine.cpp.o.d -o src/CMakeFiles/morphio_obj.dir/dendritic_spine.cpp.o -c /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/src/dendritic_spine.cpp [5/48] /usr/bin/g++ -DMORPHIO_USE_DOUBLE -I/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0 -I/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/src/../include -isystem /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/3rdparty/lexertl14/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++14 -fPIC -MD -MT src/CMakeFiles/morphio_obj.dir/glial_cell.cpp.o -MF src/CMakeFiles/morphio_obj.dir/glial_cell.cpp.o.d -o src/CMakeFiles/morphio_obj.dir/glial_cell.cpp.o -c /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/src/glial_cell.cpp [6/48] /usr/bin/g++ -DMORPHIO_USE_DOUBLE -I/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0 -I/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/src/../include -isystem /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/3rdparty/lexertl14/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++14 -fPIC -MD -MT src/CMakeFiles/morphio_obj.dir/mito_section.cpp.o -MF src/CMakeFiles/morphio_obj.dir/mito_section.cpp.o.d -o src/CMakeFiles/morphio_obj.dir/mito_section.cpp.o -c /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/src/mito_section.cpp [7/48] /usr/bin/g++ -DMORPHIO_USE_DOUBLE -I/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0 -I/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/src/../include -isystem /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/3rdparty/lexertl14/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++14 -fPIC 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-std=c++14 -fPIC -MD -MT src/CMakeFiles/morphio_obj.dir/readers/morphologyASC.cpp.o -MF src/CMakeFiles/morphio_obj.dir/readers/morphologyASC.cpp.o.d -o src/CMakeFiles/morphio_obj.dir/readers/morphologyASC.cpp.o -c /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/src/readers/morphologyASC.cpp [41/48] : && /usr/bin/cmake -E rm -f src/libmorphio_static.a && /usr/bin/ar qc src/libmorphio_static.a src/CMakeFiles/morphio_obj.dir/collection.cpp.o src/CMakeFiles/morphio_obj.dir/dendritic_spine.cpp.o src/CMakeFiles/morphio_obj.dir/endoplasmic_reticulum.cpp.o src/CMakeFiles/morphio_obj.dir/enums.cpp.o src/CMakeFiles/morphio_obj.dir/errorMessages.cpp.o src/CMakeFiles/morphio_obj.dir/error_message_generation.cpp.o src/CMakeFiles/morphio_obj.dir/glial_cell.cpp.o src/CMakeFiles/morphio_obj.dir/mito_section.cpp.o src/CMakeFiles/morphio_obj.dir/mitochondria.cpp.o src/CMakeFiles/morphio_obj.dir/morphology.cpp.o src/CMakeFiles/morphio_obj.dir/mut/dendritic_spine.cpp.o src/CMakeFiles/morphio_obj.dir/mut/endoplasmic_reticulum.cpp.o src/CMakeFiles/morphio_obj.dir/mut/glial_cell.cpp.o src/CMakeFiles/morphio_obj.dir/mut/mito_section.cpp.o src/CMakeFiles/morphio_obj.dir/mut/mitochondria.cpp.o src/CMakeFiles/morphio_obj.dir/mut/modifiers.cpp.o src/CMakeFiles/morphio_obj.dir/mut/morphology.cpp.o src/CMakeFiles/morphio_obj.dir/mut/section.cpp.o src/CMakeFiles/morphio_obj.dir/mut/soma.cpp.o src/CMakeFiles/morphio_obj.dir/mut/writer_asc.cpp.o src/CMakeFiles/morphio_obj.dir/mut/writer_hdf5.cpp.o src/CMakeFiles/morphio_obj.dir/mut/writer_swc.cpp.o src/CMakeFiles/morphio_obj.dir/mut/writer_utils.cpp.o src/CMakeFiles/morphio_obj.dir/point_utils.cpp.o src/CMakeFiles/morphio_obj.dir/properties.cpp.o src/CMakeFiles/morphio_obj.dir/readers/morphologyASC.cpp.o src/CMakeFiles/morphio_obj.dir/readers/morphologyHDF5.cpp.o src/CMakeFiles/morphio_obj.dir/readers/morphologySWC.cpp.o src/CMakeFiles/morphio_obj.dir/readers/utils.cpp.o src/CMakeFiles/morphio_obj.dir/readers/vasculatureHDF5.cpp.o src/CMakeFiles/morphio_obj.dir/section.cpp.o src/CMakeFiles/morphio_obj.dir/shared_utils.cpp.o src/CMakeFiles/morphio_obj.dir/soma.cpp.o src/CMakeFiles/morphio_obj.dir/vasc/properties.cpp.o src/CMakeFiles/morphio_obj.dir/vasc/section.cpp.o src/CMakeFiles/morphio_obj.dir/vasc/vasculature.cpp.o src/CMakeFiles/morphio_obj.dir/version.cpp.o src/CMakeFiles/morphio_obj.dir/warning_handling.cpp.o && /usr/bin/ranlib src/libmorphio_static.a && : [42/48] /usr/bin/g++ -DMORPHIO_USE_DOUBLE -D_morphio_EXPORTS -isystem /usr/include/python3.13 -isystem /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu++14 -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -MD -MT binds/python/CMakeFiles/_morphio.dir/bind_immutable.cpp.o -MF binds/python/CMakeFiles/_morphio.dir/bind_immutable.cpp.o.d -o binds/python/CMakeFiles/_morphio.dir/bind_immutable.cpp.o -c /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/binds/python/bind_immutable.cpp [43/48] /usr/bin/g++ -DMORPHIO_USE_DOUBLE -D_morphio_EXPORTS -isystem /usr/include/python3.13 -isystem /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu++14 -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -MD -MT binds/python/CMakeFiles/_morphio.dir/bind_vasculature.cpp.o -MF binds/python/CMakeFiles/_morphio.dir/bind_vasculature.cpp.o.d -o binds/python/CMakeFiles/_morphio.dir/bind_vasculature.cpp.o -c /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/binds/python/bind_vasculature.cpp [44/48] /usr/bin/g++ -DMORPHIO_USE_DOUBLE -D_morphio_EXPORTS -isystem /usr/include/python3.13 -isystem /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu++14 -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -MD -MT binds/python/CMakeFiles/_morphio.dir/bind_misc.cpp.o -MF binds/python/CMakeFiles/_morphio.dir/bind_misc.cpp.o.d -o binds/python/CMakeFiles/_morphio.dir/bind_misc.cpp.o -c /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/binds/python/bind_misc.cpp [45/48] /usr/bin/g++ -DMORPHIO_USE_DOUBLE -D_morphio_EXPORTS -isystem /usr/include/python3.13 -isystem /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu++14 -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -MD -MT binds/python/CMakeFiles/_morphio.dir/bindings_utils.cpp.o -MF binds/python/CMakeFiles/_morphio.dir/bindings_utils.cpp.o.d -o binds/python/CMakeFiles/_morphio.dir/bindings_utils.cpp.o -c /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/binds/python/bindings_utils.cpp [46/48] /usr/bin/g++ -DMORPHIO_USE_DOUBLE -D_morphio_EXPORTS -isystem /usr/include/python3.13 -isystem /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu++14 -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -MD -MT binds/python/CMakeFiles/_morphio.dir/bind_mutable.cpp.o -MF binds/python/CMakeFiles/_morphio.dir/bind_mutable.cpp.o.d -o binds/python/CMakeFiles/_morphio.dir/bind_mutable.cpp.o -c /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/binds/python/bind_mutable.cpp [47/48] /usr/bin/g++ -DMORPHIO_USE_DOUBLE -D_morphio_EXPORTS -isystem /usr/include/python3.13 -isystem /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu++14 -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -MD -MT binds/python/CMakeFiles/_morphio.dir/bind_warnings_exceptions.cpp.o -MF binds/python/CMakeFiles/_morphio.dir/bind_warnings_exceptions.cpp.o.d -o binds/python/CMakeFiles/_morphio.dir/bind_warnings_exceptions.cpp.o -c /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/binds/python/bind_warnings_exceptions.cpp [48/48] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -flto -Wl,--dependency-file=binds/python/CMakeFiles/_morphio.dir/link.d -shared -o /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/build/lib.linux-x86_64-cpython-313/morphio/_morphio.cpython-313-x86_64-linux-gnu.so binds/python/CMakeFiles/_morphio.dir/morphio.cpp.o binds/python/CMakeFiles/_morphio.dir/bind_enums.cpp.o binds/python/CMakeFiles/_morphio.dir/bind_immutable.cpp.o binds/python/CMakeFiles/_morphio.dir/bind_misc.cpp.o binds/python/CMakeFiles/_morphio.dir/bind_mutable.cpp.o binds/python/CMakeFiles/_morphio.dir/bind_vasculature.cpp.o binds/python/CMakeFiles/_morphio.dir/bind_warnings_exceptions.cpp.o binds/python/CMakeFiles/_morphio.dir/bindings_utils.cpp.o src/libmorphio_static.a /usr/lib64/libhdf5.so && cd /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/build/temp.linux-x86_64-cpython-313/binds/python && /bin/true /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/build/lib.linux-x86_64-cpython-313/morphio/_morphio.cpython-313-x86_64-linux-gnu.so installing to build/bdist.linux-x86_64/wheel running install running install_lib creating build/bdist.linux-x86_64 creating build/bdist.linux-x86_64/wheel creating build/bdist.linux-x86_64/wheel/morphio copying build/lib.linux-x86_64-cpython-313/morphio/__init__.py -> build/bdist.linux-x86_64/wheel/./morphio creating build/bdist.linux-x86_64/wheel/morphio/mut copying build/lib.linux-x86_64-cpython-313/morphio/mut/__init__.py -> build/bdist.linux-x86_64/wheel/./morphio/mut creating build/bdist.linux-x86_64/wheel/morphio/vasculature copying build/lib.linux-x86_64-cpython-313/morphio/vasculature/__init__.py -> build/bdist.linux-x86_64/wheel/./morphio/vasculature copying build/lib.linux-x86_64-cpython-313/morphio/_morphio.cpython-313-x86_64-linux-gnu.so -> build/bdist.linux-x86_64/wheel/./morphio running install_egg_info running egg_info writing morphio.egg-info/PKG-INFO writing dependency_links to morphio.egg-info/dependency_links.txt writing requirements to morphio.egg-info/requires.txt writing top-level names to morphio.egg-info/top_level.txt reading manifest file 'morphio.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching '3rdparty/HighFive/CMakeLists.txt' warning: no files found matching '*' under directory '3rdparty/HighFive/include' warning: no files found matching '*' under directory '3rdparty/HighFive/CMake' warning: no files found matching '*' under directory '3rdparty/HighFive/doc' warning: no files found matching '3rdparty/lexertl14/CMakeLists.txt' warning: no files found matching '*' under directory '3rdparty/lexertl14/include/lexertl' warning: no files found matching '*' under directory 'binds/python/pybind11/include' warning: no files found matching '*.cmake' under directory 'binds/python/pybind11/tools' warning: no files found matching 'binds/python/pybind11/CMakeLists.txt' warning: no files found matching 'binds/python/pybind11/LICENSE' no previously-included directories found matching 'ci' no previously-included directories found matching 'doc' no previously-included directories found matching 'scripts' no previously-included directories found matching 'examples' adding license file 'LICENSE.txt' adding license file 'AUTHORS.txt' writing manifest file 'morphio.egg-info/SOURCES.txt' Copying morphio.egg-info to build/bdist.linux-x86_64/wheel/./morphio-3.4.0-py3.13.egg-info running install_scripts creating build/bdist.linux-x86_64/wheel/morphio-3.4.0.dist-info/WHEEL creating '/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/.pyproject-builddir/pip-wheel-pb8i1jmi/.tmp-o0w0c_cf/morphio-3.4.0-cp313-cp313-linux_x86_64.whl' and adding 'build/bdist.linux-x86_64/wheel' to it adding 'morphio/__init__.py' adding 'morphio/_morphio.cpython-313-x86_64-linux-gnu.so' adding 'morphio/mut/__init__.py' adding 'morphio/vasculature/__init__.py' adding 'morphio-3.4.0.dist-info/AUTHORS.txt' adding 'morphio-3.4.0.dist-info/LICENSE.txt' adding 'morphio-3.4.0.dist-info/METADATA' adding 'morphio-3.4.0.dist-info/WHEEL' adding 'morphio-3.4.0.dist-info/top_level.txt' adding 'morphio-3.4.0.dist-info/RECORD' removing build/bdist.linux-x86_64/wheel Building wheel for morphio (pyproject.toml): finished with status 'done' Created wheel for morphio: filename=morphio-3.4.0-cp313-cp313-linux_x86_64.whl size=13958932 sha256=e26c154a18f328aeeaf3e74d6856f21715b9dd1a32dca510a6a652b4dc9e79c9 Stored in directory: /builddir/.cache/pip/wheels/ee/c3/10/370becb4d63347b21ed8b192db03b5bd7c455f6dcc44ad4816 Successfully built morphio + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.4NHD3Z + umask 022 + cd /builddir/build/BUILD/morphio-3.4.0-build + '[' /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT '!=' / ']' + rm -rf /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT ++ dirname /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT + mkdir -p /builddir/build/BUILD/morphio-3.4.0-build + mkdir /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd MorphIO-3.4.0 + DESTDIR=/builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT + /usr/bin/cmake --install redhat-linux-build -- Install configuration: "" -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/collection.h -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/dendritic_spine.h -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/endoplasmic_reticulum.h -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/enums.h -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/errorMessages.h -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/exceptions.h -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/glial_cell.h -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/mito_section.h -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/mitochondria.h -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/morphology.h -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/mut -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/mut/dendritic_spine.h -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/mut/endoplasmic_reticulum.h -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/mut/glial_cell.h -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/mut/mito_section.h -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/mut/mitochondria.h -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/mut/modifiers.h -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/mut/morphology.h -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/mut/section.h -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/mut/soma.h -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/mut/writers.h -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/properties.h -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/section.h -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/section_base.h -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/section_iterators.hpp -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/soma.h -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/types.h -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/vasc -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/vasc/iterators.hpp -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/vasc/properties.h -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/vasc/section.h -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/vasc/vasculature.h -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/vector_types.h -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/version.h -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/warning_handling.h -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/lib64/cmake/MorphIO/MorphIOTargets.cmake -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/lib64/cmake/MorphIO/MorphIOTargets-noconfig.cmake -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/lib64/cmake/MorphIO/MorphIOConfig.cmake -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/lib64/libmorphio.so.0.0.0 -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/lib64/libmorphio.so ++ ls /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/pyproject-wheeldir/morphio-3.4.0-cp313-cp313-linux_x86_64.whl ++ xargs basename --multiple ++ sed -E 's/([^-]+)-([^-]+)-.+\.whl/\1==\2/' + specifier=morphio==3.4.0 + '[' -z morphio==3.4.0 ']' + TMPDIR=/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/.pyproject-builddir + /usr/bin/python3 -m pip install --root /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT --prefix /usr --no-deps --disable-pip-version-check --progress-bar off --verbose --ignore-installed --no-warn-script-location --no-index --no-cache-dir --find-links /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/pyproject-wheeldir morphio==3.4.0 Using pip 24.3.1 from /usr/lib/python3.13/site-packages/pip (python 3.13) Looking in links: /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/pyproject-wheeldir Processing ./pyproject-wheeldir/morphio-3.4.0-cp313-cp313-linux_x86_64.whl Installing collected packages: morphio Successfully installed morphio-3.4.0 + '[' -d /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/bin ']' + rm -f /builddir/build/BUILD/morphio-3.4.0-build/morphio-3.4.0-11.fc43.x86_64-pyproject-ghost-distinfo + site_dirs=() + '[' -d /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/lib/python3.13/site-packages ']' + '[' /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/lib64/python3.13/site-packages '!=' /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/lib/python3.13/site-packages ']' + '[' -d /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/lib64/python3.13/site-packages ']' + site_dirs+=("/usr/lib64/python3.13/site-packages") + for site_dir in ${site_dirs[@]} + for distinfo in /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT$site_dir/*.dist-info + echo '%ghost /usr/lib64/python3.13/site-packages/morphio-3.4.0.dist-info' + sed -i s/pip/rpm/ /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/morphio-3.4.0.dist-info/INSTALLER + PYTHONPATH=/usr/lib/rpm/redhat + /usr/bin/python3 -B /usr/lib/rpm/redhat/pyproject_preprocess_record.py --buildroot /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT --record /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/morphio-3.4.0.dist-info/RECORD --output /builddir/build/BUILD/morphio-3.4.0-build/morphio-3.4.0-11.fc43.x86_64-pyproject-record + rm -fv /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/morphio-3.4.0.dist-info/RECORD removed '/builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/morphio-3.4.0.dist-info/RECORD' + rm -fv /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/morphio-3.4.0.dist-info/REQUESTED removed '/builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/morphio-3.4.0.dist-info/REQUESTED' ++ wc -l /builddir/build/BUILD/morphio-3.4.0-build/morphio-3.4.0-11.fc43.x86_64-pyproject-ghost-distinfo ++ cut -f1 '-d ' + lines=1 + '[' 1 -ne 1 ']' + RPM_FILES_ESCAPE=4.19 + /usr/bin/python3 /usr/lib/rpm/redhat/pyproject_save_files.py --output-files /builddir/build/BUILD/morphio-3.4.0-build/morphio-3.4.0-11.fc43.x86_64-pyproject-files --output-modules /builddir/build/BUILD/morphio-3.4.0-build/morphio-3.4.0-11.fc43.x86_64-pyproject-modules --buildroot /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT --sitelib /usr/lib/python3.13/site-packages --sitearch /usr/lib64/python3.13/site-packages --python-version 3.13 --pyproject-record /builddir/build/BUILD/morphio-3.4.0-build/morphio-3.4.0-11.fc43.x86_64-pyproject-record --prefix /usr -l morphio + /usr/bin/find-debuginfo -j4 --strict-build-id -m -i --build-id-seed 3.4.0-11.fc43 --unique-debug-suffix -3.4.0-11.fc43.x86_64 --unique-debug-src-base morphio-3.4.0-11.fc43.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0 find-debuginfo: starting Extracting debug info from 2 files DWARF-compressing 2 files sepdebugcrcfix: Updated 2 CRC32s, 0 CRC32s did match. Creating .debug symlinks for symlinks to ELF files Copying sources found by 'debugedit -l' to /usr/src/debug/morphio-3.4.0-11.fc43.x86_64 find-debuginfo: done + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j4 Bytecompiling .py files below /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/lib64/python3.13 using python3.13 Bytecompiling .py files below /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/lib/debug/usr/lib64/python3.13 using python3.13 + /usr/lib/rpm/redhat/brp-python-hardlink + /usr/bin/add-determinism --brp -j4 /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/morphio/vasculature/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/morphio/mut/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/morphio/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents Scanned 43 directories and 154 files, processed 3 inodes, 3 modified (0 replaced + 3 rewritten), 0 unsupported format, 0 errors Reading /builddir/build/BUILD/morphio-3.4.0-build/SPECPARTS/rpm-debuginfo.specpart Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.fgu66F + umask 022 + cd /builddir/build/BUILD/morphio-3.4.0-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd MorphIO-3.4.0 + /usr/bin/ctest --test-dir redhat-linux-build --output-on-failure --force-new-ctest-process -j4 -VV UpdateCTestConfiguration from :/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/redhat-linux-build/DartConfiguration.tcl Test project /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/redhat-linux-build Constructing a list of tests Done constructing a list of tests Updating test list for fixtures Added 0 tests to meet fixture requirements Checking test dependency graph... Checking test dependency graph end test 1 Start 1: unittests 1: Test command: /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/bin/unittests 1: Working Directory: /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/tests 1: Test timeout computed to be: 9999879 1: 1: $STRING$:2:warning 1: Warning: found a disconnected neurite. 1: Neurites are not supposed to have parentId: -1 1: (although this is normal if this neuron has no soma) 1: 1: $STRING$:2:warning 1: Warning: found a disconnected neurite. 1: Neurites are not supposed to have parentId: -1 1: (although this is normal if this neuron has no soma) 1: 1: $STRING$:2:warning 1: Warning: found a disconnected neurite. 1: Neurites are not supposed to have parentId: -1 1: (although this is normal if this neuron has no soma) 1: 1: $STRING$:2:warning 1: Warning: found a disconnected neurite. 1: Neurites are not supposed to have parentId: -1 1: (although this is normal if this neuron has no soma) 1: 1: $STRING$:4:warning 1: Warning: found a disconnected neurite. 1: Neurites are not supposed to have parentId: -1 1: (although this is normal if this neuron has no soma) 1: 1: $STRING$:0:warning 1: Warning: no soma found in file 1: 1: $STRING$:3:warning 1: Warning: Type changed within section, without bifurcation 1: 1: $STRING$:4:warning 1: Warning: Type changed within section, without bifurcation 1: 1: $STRING$:5:warning 1: Warning: Type changed within section, without bifurcation 1: 1: data/single_point_root.asc:0:warning 1: Warning: no soma found in file 1: 1: Warning: section 1 is the only child of section: 0 1: It will be merged with the parent section 1: 1: Warning: section 2 is the only child of section: 0 1: It will be merged with the parent section 1: 1: Warning: section 3 is the only child of section: 0 1: It will be merged with the parent section 1: 1: Warning: Skipping an attempt to write an empty morphology. 1: 1: Warning: writing file without a soma 1: 1: Warning: writing soma set to SOMA_UNDEFINED 1: 1: Soma must be stacked cylinders or a point: see https://github.com/BlueBrain/MorphIO/issues/457 1: 1: Three Point Soma: Only one column has the same coordinates. 1: 1: data/h5/v1/Neuron-no-soma.h5:0:warning 1: Warning: no soma found in file 1: 1: data/h5/v1/simple-dendritric-spine.h5:0:warning 1: Warning: no soma found in file 1: 1: data/h5/v1/single-neurite.h5:0:warning 1: Warning: no soma found in file 1: Skipping LoadSWCMorphologyLocale because `std::locale` failed. 1: 1: data/markers.asc:0:warning 1: Warning: no soma found in file 1: 1: data/annotations.asc:0:warning 1: Warning: no soma found in file 1: 1: Warning: section 1 is the only child of section: 0 1: It will be merged with the parent section 1: 1: data/h5/v1/simple-dendritric-spine.h5:0:warning 1: Warning: no soma found in file 1: 1: data/h5/v1/simple-dendritric-spine.h5:0:warning 1: Warning: no soma found in file 1: 1: data/h5/v1/simple-dendritric-spine.h5:0:warning 1: Warning: no soma found in file 1: 1: HDF5 GROUP:0:warning 1: Warning: no soma found in file 1: 1: data/h5/v1/simple-dendritric-spine.h5:0:warning 1: Warning: no soma found in file 1: 1: Warning: while appending section: 2 to parent: 1 1: The section first point should be parent section last point: 1: : X Y Z Diameter 1: parent last point :[0.000000, 15.900000, 0.000000, 2.400000] 1: child first point :[0.000000, 13.200000, 0.000000, 2.300000] 1: 1: 1: data/h5/v1/simple-dendritric-spine.h5:0:warning 1: Warning: no soma found in file 1: 1: Warning: while appending section: 2 to parent: 1 1: The section first point should be parent section last point: 1: : X Y Z Diameter 1: parent last point :[0.000000, 15.900000, 0.000000, 2.400000] 1: child first point :[0.000000, 13.200000, 0.000000, 2.300000] 1: 1: 1: data/h5/v1/simple-dendritric-spine.h5:0:warning 1: Warning: no soma found in file 1: 1: Warning: while appending section: 2 to parent: 1 1: The section first point should be parent section last point: 1: : X Y Z Diameter 1: parent last point :[0.000000, 15.900000, 0.000000, 2.400000] 1: child first point :[0.000000, 13.200000, 0.000000, 2.300000] 1: 1: 1: HDF5 GROUP:0:warning 1: Warning: no soma found in file 1: 1: Warning: while appending section: 2 to parent: 1 1: The section first point should be parent section last point: 1: : X Y Z Diameter 1: parent last point :[0.000000, 15.900000, 0.000000, 2.400000] 1: child first point :[0.000000, 13.200000, 0.000000, 2.300000] 1: 1: 1: data/h5/v1/simple-dendritric-spine.h5:0:warning 1: Warning: no soma found in file 1: 1: data/h5/v1/simple-dendritric-spine.h5:0:warning 1: Warning: no soma found in file 1: 1: HDF5 GROUP:0:warning 1: Warning: no soma found in file 1: 1: HDF5 GROUP:0:warning 1: Warning: no soma found in file 1: =============================================================================== 1: All tests passed (469 assertions in 60 test cases) 1: 1/1 Test #1: unittests ........................ Passed 0.35 sec 100% tests passed, 0 tests failed out of 1 Total Test time (real) = 0.35 sec ++ basename /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0 + xdir=MorphIO-3.4.0 + cd .. + k='not test_v2' + k='not test_v2 and not test_neurolucida_markers' + k='not test_v2 and not test_neurolucida_markers and not test_marker_with_string' + k='not test_v2 and not test_neurolucida_markers and not test_marker_with_string and not test_mitochondria' + k='not test_v2 and not test_neurolucida_markers and not test_marker_with_string and not test_mitochondria and not test_mitochondria_read' + k='not test_v2 and not test_neurolucida_markers and not test_marker_with_string and not test_mitochondria and not test_mitochondria_read and not test_dendritic_spine_round_trip_empty_postsynaptic_density' + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + PATH=/builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin + PYTHONPATH=/builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/lib64/python3.13/site-packages:/builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/lib/python3.13/site-packages + PYTHONDONTWRITEBYTECODE=1 + PYTEST_ADDOPTS=' --ignore=/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/.pyproject-builddir' + PYTEST_XDIST_AUTO_NUM_WORKERS=4 + /usr/bin/pytest MorphIO-3.4.0/tests -k 'not test_v2 and not test_neurolucida_markers and not test_marker_with_string and not test_mitochondria and not test_mitochondria_read and not test_dendritic_spine_round_trip_empty_postsynaptic_density' -v ============================= test session starts ============================== platform linux -- Python 3.13.2, pytest-8.3.4, pluggy-1.5.0 -- /usr/bin/python3 cachedir: .pytest_cache rootdir: /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0 configfile: pyproject.toml collecting ... collected 171 items / 8 deselected / 163 selected MorphIO-3.4.0/tests/test_0_API.py::test_doc_exists PASSED [ 0%] MorphIO-3.4.0/tests/test_0_API.py::test_mut_immut_have_same_methods PASSED [ 1%] MorphIO-3.4.0/tests/test_10_vasculature.py::test_empty_vasculature PASSED [ 1%] MorphIO-3.4.0/tests/test_10_vasculature.py::test_components_vasculature PASSED [ 2%] MorphIO-3.4.0/tests/test_10_vasculature.py::test_section_types PASSED [ 3%] MorphIO-3.4.0/tests/test_10_vasculature.py::test_section_offsets PASSED [ 3%] MorphIO-3.4.0/tests/test_10_vasculature.py::test_section_connectivity PASSED [ 4%] MorphIO-3.4.0/tests/test_10_vasculature.py::test_iterators_vasculature PASSED [ 4%] MorphIO-3.4.0/tests/test_10_vasculature.py::test_from_pathlib PASSED [ 5%] MorphIO-3.4.0/tests/test_10_vasculature.py::test_section___str__ PASSED [ 6%] MorphIO-3.4.0/tests/test_11_collection.py::test_load_from_collection_with_context[collection_path0] PASSED [ 6%] MorphIO-3.4.0/tests/test_11_collection.py::test_load_from_collection_with_context[collection_path1] PASSED [ 7%] MorphIO-3.4.0/tests/test_11_collection.py::test_load_from_collection_without_context[collection_path0] PASSED [ 7%] MorphIO-3.4.0/tests/test_11_collection.py::test_load_from_collection_without_context[collection_path1] PASSED [ 8%] MorphIO-3.4.0/tests/test_11_collection.py::test_container_unordered[collection_path0] PASSED [ 9%] MorphIO-3.4.0/tests/test_11_collection.py::test_container_unordered[collection_path1] PASSED [ 9%] MorphIO-3.4.0/tests/test_11_collection.py::test_container_unordered1[collection_path0] PASSED [ 10%] MorphIO-3.4.0/tests/test_11_collection.py::test_container_unordered1[collection_path1] PASSED [ 11%] MorphIO-3.4.0/tests/test_11_collection.py::test_container_with_warning_handler PASSED [ 11%] MorphIO-3.4.0/tests/test_1_swc.py::test_basic PASSED [ 12%] MorphIO-3.4.0/tests/test_1_swc.py::test_build_from_string PASSED [ 12%] MorphIO-3.4.0/tests/test_1_swc.py::test_read_single_neurite PASSED [ 13%] MorphIO-3.4.0/tests/test_1_swc.py::test_skip_comments PASSED [ 14%] MorphIO-3.4.0/tests/test_1_swc.py::test_read_simple PASSED [ 14%] MorphIO-3.4.0/tests/test_1_swc.py::test_set_raise_warnings PASSED [ 15%] MorphIO-3.4.0/tests/test_1_swc.py::test_repeated_id PASSED [ 15%] MorphIO-3.4.0/tests/test_1_swc.py::test_neurite_followed_by_soma PASSED [ 16%] MorphIO-3.4.0/tests/test_1_swc.py::test_read_split_soma PASSED [ 17%] MorphIO-3.4.0/tests/test_1_swc.py::test_weird_indent PASSED [ 17%] MorphIO-3.4.0/tests/test_1_swc.py::test_cyclic PASSED [ 18%] MorphIO-3.4.0/tests/test_1_swc.py::test_simple_reversed PASSED [ 19%] MorphIO-3.4.0/tests/test_1_swc.py::test_soma_type_1_point PASSED [ 19%] MorphIO-3.4.0/tests/test_1_swc.py::test_soma_type_2_point PASSED [ 20%] MorphIO-3.4.0/tests/test_1_swc.py::test_soma_type_many_point PASSED [ 20%] MorphIO-3.4.0/tests/test_1_swc.py::test_soma_type_3_point_neuromorpho PASSED [ 21%] MorphIO-3.4.0/tests/test_1_swc.py::test_soma_type_3_point PASSED [ 22%] MorphIO-3.4.0/tests/test_1_swc.py::test_swc_threepoint_soma_tolerance PASSED [ 22%] MorphIO-3.4.0/tests/test_1_swc.py::test_read_weird_ids PASSED [ 23%] MorphIO-3.4.0/tests/test_1_swc.py::test_multiple_soma PASSED [ 23%] MorphIO-3.4.0/tests/test_1_swc.py::test_disconnected_neurite PASSED [ 24%] MorphIO-3.4.0/tests/test_1_swc.py::test_neurite_wrong_root_point_neuromorpho_3_point_soma PASSED [ 25%] MorphIO-3.4.0/tests/test_1_swc.py::test_read_duplicate PASSED [ 25%] MorphIO-3.4.0/tests/test_1_swc.py::test_unsupported_section_type PASSED [ 26%] MorphIO-3.4.0/tests/test_1_swc.py::test_three_point_soma_neuromorpho PASSED [ 26%] MorphIO-3.4.0/tests/test_1_swc.py::test_three_point_soma_stacked_cylinders PASSED [ 27%] MorphIO-3.4.0/tests/test_1_swc.py::test_trailing_space PASSED [ 28%] MorphIO-3.4.0/tests/test_1_swc.py::test_zero_diameter PASSED [ 28%] MorphIO-3.4.0/tests/test_1_swc.py::test_version PASSED [ 29%] MorphIO-3.4.0/tests/test_1_swc.py::test_no_soma PASSED [ 30%] MorphIO-3.4.0/tests/test_1_swc.py::test_throw_on_missing_data PASSED [ 30%] MorphIO-3.4.0/tests/test_1_swc.py::test_throw_on_negative_id PASSED [ 31%] MorphIO-3.4.0/tests/test_1_swc.py::test_axon_carrying_dendrite PASSED [ 31%] MorphIO-3.4.0/tests/test_1_swc.py::test_multi_type_section PASSED [ 32%] MorphIO-3.4.0/tests/test_1_swc.py::test_missing_parent PASSED [ 33%] MorphIO-3.4.0/tests/test_1_swc.py::test_extra_column PASSED [ 33%] MorphIO-3.4.0/tests/test_1_swc.py::test_read_simple_windows_eol PASSED [ 34%] MorphIO-3.4.0/tests/test_1_swc.py::test_WarningHandlerCollector PASSED [ 34%] MorphIO-3.4.0/tests/test_2_neurolucida.py::test_soma PASSED [ 35%] MorphIO-3.4.0/tests/test_2_neurolucida.py::test_parse_number_with_plus_symbol PASSED [ 36%] MorphIO-3.4.0/tests/test_2_neurolucida.py::test_unknown_token PASSED [ 36%] MorphIO-3.4.0/tests/test_2_neurolucida.py::test_unfinished_point PASSED [ 37%] MorphIO-3.4.0/tests/test_2_neurolucida.py::test_multiple_soma PASSED [ 38%] MorphIO-3.4.0/tests/test_2_neurolucida.py::test_single_neurite_no_soma PASSED [ 38%] MorphIO-3.4.0/tests/test_2_neurolucida.py::test_skip_header PASSED [ 39%] MorphIO-3.4.0/tests/test_2_neurolucida.py::test_read_with_duplicates PASSED [ 39%] MorphIO-3.4.0/tests/test_2_neurolucida.py::test_read_without_duplicates PASSED [ 40%] MorphIO-3.4.0/tests/test_2_neurolucida.py::test_explicit_duplicates_with_arbitrary_diameter PASSED [ 41%] MorphIO-3.4.0/tests/test_2_neurolucida.py::test_unfinished_file PASSED [ 41%] MorphIO-3.4.0/tests/test_2_neurolucida.py::test_section_single_point PASSED [ 42%] MorphIO-3.4.0/tests/test_2_neurolucida.py::test_single_children PASSED [ 42%] MorphIO-3.4.0/tests/test_2_neurolucida.py::test_spine PASSED [ 43%] MorphIO-3.4.0/tests/test_2_neurolucida.py::test_single_point_section_duplicate_parent PASSED [ 44%] MorphIO-3.4.0/tests/test_2_neurolucida.py::test_single_point_section_duplicate_parent_complex PASSED [ 44%] MorphIO-3.4.0/tests/test_2_neurolucida.py::test_spine1 PASSED [ 45%] MorphIO-3.4.0/tests/test_2_neurolucida.py::test_markers PASSED [ 46%] MorphIO-3.4.0/tests/test_2_neurolucida.py::test_string_markers PASSED [ 46%] MorphIO-3.4.0/tests/test_2_neurolucida.py::test_invalid_incomplete PASSED [ 47%] MorphIO-3.4.0/tests/test_2_neurolucida.py::test_skip_font PASSED [ 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MorphIO-3.4.0/tests/test_4_immut.py::test_connectivity PASSED [ 57%] MorphIO-3.4.0/tests/test_4_immut.py::test_endoplasmic_reticulum PASSED [ 57%] MorphIO-3.4.0/tests/test_4_immut.py::test_section___str__ PASSED [ 58%] MorphIO-3.4.0/tests/test_4_immut.py::test_section_has_same_shape PASSED [ 58%] MorphIO-3.4.0/tests/test_4_immut.py::test_from_pathlib PASSED [ 59%] MorphIO-3.4.0/tests/test_4_immut.py::test_more_iter PASSED [ 60%] MorphIO-3.4.0/tests/test_4_immut.py::test_glia PASSED [ 60%] MorphIO-3.4.0/tests/test_4_immut.py::test_dendritic_spine PASSED [ 61%] MorphIO-3.4.0/tests/test_4_immut.py::test_dendritic_spine_add_root_section PASSED [ 61%] MorphIO-3.4.0/tests/test_5_mut.py::test_heterogeneous_sections PASSED [ 62%] MorphIO-3.4.0/tests/test_5_mut.py::test_point_level PASSED [ 63%] MorphIO-3.4.0/tests/test_5_mut.py::test_connectivity PASSED [ 63%] MorphIO-3.4.0/tests/test_5_mut.py::test_empty_neurite PASSED [ 64%] MorphIO-3.4.0/tests/test_5_mut.py::test_single_neurite PASSED [ 65%] MorphIO-3.4.0/tests/test_5_mut.py::test_child_section PASSED [ 65%] MorphIO-3.4.0/tests/test_5_mut.py::test_append_no_duplicate PASSED [ 66%] MorphIO-3.4.0/tests/test_5_mut.py::test_mut_copy_ctor PASSED [ 66%] MorphIO-3.4.0/tests/test_5_mut.py::test_build_read_only PASSED [ 67%] MorphIO-3.4.0/tests/test_5_mut.py::test_mutable_immutable_equivalence PASSED [ 68%] MorphIO-3.4.0/tests/test_5_mut.py::test_sections_are_not_dereferenced PASSED [ 68%] MorphIO-3.4.0/tests/test_5_mut.py::test_append_mutable_section PASSED [ 69%] MorphIO-3.4.0/tests/test_5_mut.py::test_iterators PASSED [ 69%] MorphIO-3.4.0/tests/test_5_mut.py::test_non_C_nparray PASSED [ 70%] MorphIO-3.4.0/tests/test_5_mut.py::test_annotation PASSED [ 71%] MorphIO-3.4.0/tests/test_5_mut.py::test_empty_sibling PASSED [ 71%] MorphIO-3.4.0/tests/test_5_mut.py::test_nested_single_child PASSED [ 72%] MorphIO-3.4.0/tests/test_5_mut.py::test_section___str__ PASSED [ 73%] MorphIO-3.4.0/tests/test_5_mut.py::test_from_pathlib PASSED [ 73%] MorphIO-3.4.0/tests/test_5_mut.py::test_endoplasmic_reticulum PASSED [ 74%] MorphIO-3.4.0/tests/test_5_mut.py::test_remove_unifurcations PASSED [ 74%] MorphIO-3.4.0/tests/test_5_mut.py::test_remove_rootsection PASSED [ 75%] MorphIO-3.4.0/tests/test_5_mut.py::test_remove_rootsection_in_loop PASSED [ 76%] MorphIO-3.4.0/tests/test_5_mut.py::test_glia PASSED [ 76%] MorphIO-3.4.0/tests/test_5_mut.py::test_glia_round_trip PASSED [ 77%] MorphIO-3.4.0/tests/test_5_mut.py::test_dendritic_spine PASSED [ 77%] MorphIO-3.4.0/tests/test_5_mut.py::test_dendritic_spine_round_trip PASSED [ 78%] MorphIO-3.4.0/tests/test_5_mut.py::test_lifetime_destroyed_morphology PASSED [ 79%] MorphIO-3.4.0/tests/test_5_mut.py::test_lifetime_access_properties_no_morphology PASSED [ 79%] MorphIO-3.4.0/tests/test_5_mut.py::test_lifetime_copy_single_section PASSED [ 80%] MorphIO-3.4.0/tests/test_5_mut.py::test_lifetime_iteration_fails_with_orphan_section PASSED [ 80%] MorphIO-3.4.0/tests/test_5_mut.py::test_delete_section__maintain_children_order_non_root_section PASSED [ 81%] MorphIO-3.4.0/tests/test_5_mut.py::test_delete_section__maintain_children_order_non_root_section_multiple PASSED [ 82%] MorphIO-3.4.0/tests/test_5_mut.py::test_delete_section__maintain_children_order_root_section PASSED [ 82%] MorphIO-3.4.0/tests/test_5_mut.py::test_delete_section__unifurcation_bridge PASSED [ 83%] MorphIO-3.4.0/tests/test_5_mut.py::test_delete_section__remove_all_children PASSED [ 84%] MorphIO-3.4.0/tests/test_5_mut.py::test_delete_section__append_delete PASSED [ 84%] MorphIO-3.4.0/tests/test_5_mut.py::test_delete_section__traversals PASSED [ 85%] MorphIO-3.4.0/tests/test_6_writers.py::test_write_empty_file PASSED [ 85%] MorphIO-3.4.0/tests/test_6_writers.py::test_write_undefined_soma PASSED [ 86%] MorphIO-3.4.0/tests/test_6_writers.py::test_write_soma_basic PASSED [ 87%] MorphIO-3.4.0/tests/test_6_writers.py::test_write_basic PASSED [ 87%] MorphIO-3.4.0/tests/test_6_writers.py::test_write_merge_only_child_asc_h5 PASSED [ 88%] MorphIO-3.4.0/tests/test_6_writers.py::test_write_merge_only_child_swc PASSED [ 88%] MorphIO-3.4.0/tests/test_6_writers.py::test_write_perimeter PASSED [ 89%] MorphIO-3.4.0/tests/test_6_writers.py::test_write_no_soma PASSED [ 90%] MorphIO-3.4.0/tests/test_6_writers.py::test_write_soma__points_no_diameters PASSED [ 90%] MorphIO-3.4.0/tests/test_6_writers.py::test_duplicate_different_diameter PASSED [ 91%] MorphIO-3.4.0/tests/test_6_writers.py::test_single_point_root_section PASSED [ 92%] MorphIO-3.4.0/tests/test_6_writers.py::test_write_custom_property__throws PASSED [ 92%] MorphIO-3.4.0/tests/test_6_writers.py::test_write_soma_types PASSED [ 93%] MorphIO-3.4.0/tests/test_6_writers.py::test_write_soma_invariants PASSED [ 93%] MorphIO-3.4.0/tests/test_6_writers.py::test_diameter_mismatch PASSED [ 94%] MorphIO-3.4.0/tests/test_7_modifiers.py::test_no_modifier PASSED [ 95%] MorphIO-3.4.0/tests/test_7_modifiers.py::test_nrn_order PASSED [ 95%] MorphIO-3.4.0/tests/test_7_modifiers.py::test_nrn_order_stability PASSED [ 96%] MorphIO-3.4.0/tests/test_7_modifiers.py::test_two_point_section PASSED [ 96%] MorphIO-3.4.0/tests/test_7_modifiers.py::test_soma_sphere PASSED [ 97%] MorphIO-3.4.0/tests/test_7_modifiers.py::test_no_duplicate PASSED [ 98%] MorphIO-3.4.0/tests/test_8_all_morphologies.py::test_all SKIPPED (ba...) [ 98%] MorphIO-3.4.0/tests/test_9_surfaces.py::test_stacked_cylinder PASSED [ 99%] MorphIO-3.4.0/tests/test_9_surfaces.py::test_contour PASSED [100%] ================= 162 passed, 1 skipped, 8 deselected in 0.57s ================= + RPM_EC=0 ++ jobs -p + exit 0 Processing files: morphio-3.4.0-11.fc43.x86_64 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.PBVgPs + umask 022 + cd /builddir/build/BUILD/morphio-3.4.0-build + cd MorphIO-3.4.0 + LICENSEDIR=/builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/share/licenses/morphio + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/share/licenses/morphio + cp -pr /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/LICENSE.txt /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/share/licenses/morphio + RPM_EC=0 ++ jobs -p + exit 0 Provides: libmorphio.so.0.0.0()(64bit) morphio = 3.4.0-11.fc43 morphio(x86-64) = 3.4.0-11.fc43 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_2.4)(64bit) libc.so.6(GLIBC_ABI_DT_RELR)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libhdf5.so.310()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.15)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) rtld(GNU_HASH) Processing files: morphio-devel-3.4.0-11.fc43.x86_64 Provides: cmake(MorphIO) cmake(morphio) morphio-devel = 3.4.0-11.fc43 morphio-devel(x86-64) = 3.4.0-11.fc43 morphio-static = 3.4.0-11.fc43 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: cmake-filesystem(x86-64) libmorphio.so.0.0.0()(64bit) Processing files: python3-morphio-3.4.0-11.fc43.x86_64 Provides: python-morphio = 3.4.0-11.fc43 python3-morphio = 3.4.0-11.fc43 python3-morphio(x86-64) = 3.4.0-11.fc43 python3.13-morphio = 3.4.0-11.fc43 python3.13dist(morphio) = 3.4 python3dist(morphio) = 3.4 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_2.4)(64bit) libc.so.6(GLIBC_ABI_DT_RELR)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libhdf5.so.310()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.13)(64bit) libstdc++.so.6(CXXABI_1.3.15)(64bit) libstdc++.so.6(CXXABI_1.3.2)(64bit) libstdc++.so.6(CXXABI_1.3.3)(64bit) libstdc++.so.6(CXXABI_1.3.5)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) python(abi) = 3.13 python3.13dist(numpy) >= 1.14.1 rtld(GNU_HASH) Processing files: morphio-doc-3.4.0-11.fc43.noarch Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.aQqIlU + umask 022 + cd /builddir/build/BUILD/morphio-3.4.0-build + cd MorphIO-3.4.0 + DOCDIR=/builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/share/doc/morphio-doc + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/share/doc/morphio-doc + cp -pr /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/AUTHORS.txt /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/share/doc/morphio-doc + cp -pr /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/CHANGELOG.md /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/share/doc/morphio-doc + cp -pr /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/CONTRIBUTING.md /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/share/doc/morphio-doc + cp -pr /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/README.rst /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/share/doc/morphio-doc + cp -pr /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/examples /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/share/doc/morphio-doc + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.LRU41S + umask 022 + cd /builddir/build/BUILD/morphio-3.4.0-build + cd MorphIO-3.4.0 + LICENSEDIR=/builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/share/licenses/morphio-doc + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/share/licenses/morphio-doc + cp -pr /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/LICENSE.txt /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/share/licenses/morphio-doc + RPM_EC=0 ++ jobs -p + exit 0 Provides: morphio-doc = 3.4.0-11.fc43 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: morphio-debugsource-3.4.0-11.fc43.x86_64 Provides: morphio-debugsource = 3.4.0-11.fc43 morphio-debugsource(x86-64) = 3.4.0-11.fc43 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: morphio-debuginfo-3.4.0-11.fc43.x86_64 Provides: debuginfo(build-id) = f691ed27526120d5727f42b3e1080b4153cfe443 libmorphio.so.0.0.0-3.4.0-11.fc43.x86_64.debug()(64bit) morphio-debuginfo = 3.4.0-11.fc43 morphio-debuginfo(x86-64) = 3.4.0-11.fc43 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: morphio-debugsource(x86-64) = 3.4.0-11.fc43 Processing files: python3-morphio-debuginfo-3.4.0-11.fc43.x86_64 Provides: debuginfo(build-id) = 4bc7b4e581b59631a1affa10285a94d0e4752b5b python-morphio-debuginfo = 3.4.0-11.fc43 python3-morphio-debuginfo = 3.4.0-11.fc43 python3-morphio-debuginfo(x86-64) = 3.4.0-11.fc43 python3.13-morphio-debuginfo = 3.4.0-11.fc43 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: morphio-debugsource(x86-64) = 3.4.0-11.fc43 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT Wrote: /builddir/build/SRPMS/morphio-3.4.0-11.fc43.src.rpm Wrote: /builddir/build/RPMS/morphio-3.4.0-11.fc43.x86_64.rpm Wrote: /builddir/build/RPMS/python3-morphio-3.4.0-11.fc43.x86_64.rpm Wrote: /builddir/build/RPMS/morphio-debugsource-3.4.0-11.fc43.x86_64.rpm Wrote: /builddir/build/RPMS/morphio-doc-3.4.0-11.fc43.noarch.rpm Wrote: /builddir/build/RPMS/morphio-devel-3.4.0-11.fc43.x86_64.rpm Wrote: /builddir/build/RPMS/morphio-debuginfo-3.4.0-11.fc43.x86_64.rpm Wrote: /builddir/build/RPMS/python3-morphio-debuginfo-3.4.0-11.fc43.x86_64.rpm Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.18Da8N + umask 022 + cd /builddir/build/BUILD/morphio-3.4.0-build + test -d /builddir/build/BUILD/morphio-3.4.0-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/morphio-3.4.0-build + rm -rf /builddir/build/BUILD/morphio-3.4.0-build + RPM_EC=0 ++ jobs -p + exit 0 Finish: rpmbuild morphio-3.4.0-11.fc43.src.rpm Finish: build phase for morphio-3.4.0-11.fc43.src.rpm INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-x86_64-1741277852.552063/root/var/log/dnf5.log INFO: chroot_scan: creating tarball /var/lib/copr-rpmbuild/results/chroot_scan.tar.gz /bin/tar: Removing leading `/' from member names INFO: Done(/var/lib/copr-rpmbuild/results/morphio-3.4.0-11.fc43.src.rpm) Config(child) 2 minutes 55 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool Package info: { "packages": [ { "name": "morphio-doc", "epoch": null, "version": "3.4.0", "release": "11.fc43", "arch": "noarch" }, { "name": "morphio-devel", "epoch": null, "version": "3.4.0", "release": "11.fc43", "arch": "x86_64" }, { "name": "python3-morphio", "epoch": null, "version": "3.4.0", "release": "11.fc43", "arch": "x86_64" }, { "name": "morphio", "epoch": null, "version": "3.4.0", "release": "11.fc43", "arch": "x86_64" }, { "name": "morphio", "epoch": null, "version": "3.4.0", "release": "11.fc43", "arch": "src" }, { "name": "morphio-debugsource", "epoch": null, "version": "3.4.0", "release": "11.fc43", "arch": "x86_64" }, { "name": "morphio-debuginfo", "epoch": null, "version": "3.4.0", "release": "11.fc43", "arch": "x86_64" }, { "name": "python3-morphio-debuginfo", "epoch": null, "version": "3.4.0", "release": "11.fc43", "arch": "x86_64" } ] } RPMResults finished