Warning: Permanently added '54.237.207.25' (ED25519) to the list of known hosts. Running (timeout=115200): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-xxqbc24c/libghemical/libghemical.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-xxqbc24c/libghemical --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1733964338.291873 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 5.9 starting (python version = 3.13.0, NVR = mock-5.9-1.fc41), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-xxqbc24c/libghemical/libghemical.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-xxqbc24c/libghemical --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1733964338.291873 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-xxqbc24c/libghemical/libghemical.spec) Config(fedora-rawhide-aarch64) Start: clean chroot Finish: clean chroot Mock Version: 5.9 INFO: Mock Version: 5.9 Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-aarch64-bootstrap-1733964338.291873/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: Guessed host environment type: unknown INFO: Using bootstrap image: registry.fedoraproject.org/fedora:rawhide INFO: Pulling image: registry.fedoraproject.org/fedora:rawhide INFO: Copy content of container registry.fedoraproject.org/fedora:rawhide to /var/lib/mock/fedora-rawhide-aarch64-bootstrap-1733964338.291873/root INFO: Checking that registry.fedoraproject.org/fedora:rawhide image matches host's architecture INFO: mounting registry.fedoraproject.org/fedora:rawhide with podman image mount INFO: image registry.fedoraproject.org/fedora:rawhide as /var/lib/containers/storage/overlay/40384d935052c198c96c24bd43e0b0e7179fb22cba1ed6a3c899ee8cc3b2ad18/merged INFO: umounting image registry.fedoraproject.org/fedora:rawhide (/var/lib/containers/storage/overlay/40384d935052c198c96c24bd43e0b0e7179fb22cba1ed6a3c899ee8cc3b2ad18/merged) with podman image umount INFO: Package manager dnf5 detected and used (fallback) INFO: Not updating bootstrap chroot, bootstrap_image_ready=True Start(bootstrap): creating root cache Finish(bootstrap): creating root cache Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-aarch64-1733964338.291873/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf5 detected and used (direct choice) INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.20.0-1.fc42.aarch64 rpm-sequoia-1.7.0-3.fc42.aarch64 dnf5-5.2.8.1-1.fc42.aarch64 dnf5-plugins-5.2.8.1-1.fc42.aarch64 Start: installing minimal buildroot with dnf5 Updating and loading repositories: fedora 100% | 37.0 KiB/s | 10.2 KiB | 00m00s Copr repository 100% | 90.4 KiB/s | 1.5 KiB | 00m00s Additional repo https_dmalcolm_fedorap 100% | 21.5 KiB/s | 1.5 KiB | 00m00s Copr repository 100% | 100.8 MiB/s | 4.3 MiB | 00m00s Repositories loaded. Package Arch Version Repository Size Installing group/module packages: bash aarch64 5.2.37-1.fc42 fedora 8.2 MiB bzip2 aarch64 1.0.8-19.fc42 copr_base 168.7 KiB coreutils aarch64 9.5-11.fc42 copr_base 7.9 MiB cpio aarch64 2.15-2.fc41 fedora 1.2 MiB diffutils aarch64 3.10-8.fc42 copr_base 1.7 MiB fedora-release-common noarch 42-0.11 fedora 19.8 KiB findutils aarch64 1:4.10.0-4.fc42 copr_base 1.9 MiB gawk aarch64 5.3.0-4.fc41 fedora 4.2 MiB glibc-minimal-langpack aarch64 2.40.9000-21.fc42 fedora 0.0 B grep aarch64 3.11-9.fc42 copr_base 1.0 MiB gzip aarch64 1.13-2.fc42 copr_base 422.7 KiB info aarch64 7.1.1-2.fc42 fedora 613.6 KiB patch aarch64 2.7.6-25.fc41 fedora 390.6 KiB redhat-rpm-config noarch 300-1.no_annobin.0.fc42 copr_base 186.6 KiB rpm-build aarch64 4.20.0-1.fc42 fedora 1.4 MiB sed aarch64 4.9-3.fc41 fedora 1.0 MiB shadow-utils aarch64 2:4.17.0~rc1-1.fc42 fedora 4.5 MiB tar aarch64 2:1.35-4.fc41 fedora 3.1 MiB unzip aarch64 6.0-65.fc42 fedora 2.3 MiB util-linux aarch64 2.40.2-8.fc42 fedora 16.9 MiB which aarch64 2.21-42.fc41 fedora 248.2 KiB xz aarch64 1:5.6.3-2.fc42 fedora 1.5 MiB Installing dependencies: add-determinism aarch64 0.4.3-1.fc42 fedora 2.1 MiB alternatives aarch64 1.30-1.fc42 copr_base 88.7 KiB ansible-srpm-macros noarch 1-16.fc41 fedora 35.7 KiB audit-libs aarch64 4.0.2-1.fc42 copr_base 415.2 KiB authselect aarch64 1.5.0-8.fc42 fedora 309.5 KiB authselect-libs aarch64 1.5.0-8.fc42 fedora 931.9 KiB basesystem noarch 11-21.fc41 fedora 0.0 B binutils aarch64 2.43.50-9.fc42 copr_base 28.9 MiB build-reproducibility-srpm-macros noarch 0.4.3-1.fc42 fedora 735.0 B bzip2-libs aarch64 1.0.8-19.fc42 copr_base 135.1 KiB ca-certificates noarch 2024.2.69_v8.0.401-3.fc42 fedora 2.6 MiB coreutils-common aarch64 9.5-11.fc42 copr_base 11.2 MiB cracklib aarch64 2.9.11-6.fc42 copr_base 417.7 KiB crypto-policies noarch 20241128-1.gitbb7b0b0.fc42 fedora 137.3 KiB curl aarch64 8.10.1-2.fc42 fedora 581.3 KiB cyrus-sasl-lib aarch64 2.1.28-27.fc41 fedora 3.1 MiB debugedit aarch64 5.1-2.fc42 copr_base 241.5 KiB dwz aarch64 0.15-8.fc42 copr_base 319.6 KiB ed aarch64 1.20.2-2.fc41 fedora 282.8 KiB efi-srpm-macros noarch 5-13.fc42 fedora 40.2 KiB elfutils aarch64 0.192-7.fc42 copr_base 3.0 MiB elfutils-debuginfod-client aarch64 0.192-7.fc42 copr_base 141.3 KiB elfutils-default-yama-scope noarch 0.192-7.fc42 copr_base 1.8 KiB elfutils-libelf aarch64 0.192-7.fc42 copr_base 1.2 MiB elfutils-libs aarch64 0.192-7.fc42 copr_base 734.9 KiB fedora-gpg-keys noarch 42-0.3 fedora 126.4 KiB fedora-release noarch 42-0.11 fedora 0.0 B fedora-release-identity-basic noarch 42-0.11 fedora 719.0 B fedora-repos noarch 42-0.3 fedora 4.9 KiB fedora-repos-rawhide noarch 42-0.3 fedora 2.2 KiB file aarch64 5.45-8.fc42 fedora 139.5 KiB file-libs aarch64 5.45-8.fc42 fedora 10.0 MiB filesystem aarch64 3.18-29.fc42 fedora 106.0 B filesystem-srpm-macros noarch 3.18-29.fc42 fedora 36.1 KiB fonts-srpm-macros noarch 1:2.0.5-17.fc41 fedora 55.8 KiB forge-srpm-macros noarch 0.4.0-1.fc42 fedora 38.9 KiB fpc-srpm-macros noarch 1.3-13.fc41 fedora 144.0 B gdb-minimal aarch64 15.2-4.fc42 fedora 12.7 MiB gdbm aarch64 1:1.23-7.fc41 fedora 928.5 KiB gdbm-libs aarch64 1:1.23-7.fc41 fedora 426.0 KiB ghc-srpm-macros noarch 1.9.2-1.fc42 fedora 779.0 B glibc aarch64 2.40.9000-21.fc42 fedora 6.1 MiB glibc-common aarch64 2.40.9000-21.fc42 fedora 1.3 MiB glibc-gconv-extra aarch64 2.40.9000-21.fc42 fedora 18.3 MiB gmp aarch64 1:6.3.0-2.fc41 fedora 722.0 KiB gnat-srpm-macros noarch 6-6.fc41 fedora 1.0 KiB go-srpm-macros noarch 3.6.0-5.fc42 fedora 60.8 KiB jansson aarch64 2.14-1.fc42 copr_base 90.8 KiB json-c aarch64 0.18-1.fc42 copr_base 135.7 KiB kernel-srpm-macros noarch 1.0-24.fc41 fedora 1.9 KiB keyutils-libs aarch64 1.6.3-4.fc42 copr_base 96.8 KiB krb5-libs aarch64 1.21.3-3.fc42 copr_base 2.5 MiB libacl aarch64 2.3.2-2.fc41 fedora 196.1 KiB libarchive aarch64 3.7.7-1.fc42 copr_base 899.2 KiB libattr aarch64 2.5.2-4.fc41 fedora 196.6 KiB libblkid aarch64 2.40.2-8.fc42 fedora 418.6 KiB libbrotli aarch64 1.1.0-5.fc42 copr_base 904.3 KiB libcap aarch64 2.71-1.fc42 copr_base 498.5 KiB libcap-ng aarch64 0.8.5-3.fc42 copr_base 158.7 KiB libcom_err aarch64 1.47.1-6.fc42 fedora 239.3 KiB libcurl aarch64 8.10.1-2.fc42 fedora 858.4 KiB libeconf aarch64 0.7.5-1.fc42 copr_base 78.7 KiB libevent aarch64 2.1.12-14.fc42 copr_base 1.1 MiB libfdisk aarch64 2.40.2-8.fc42 fedora 482.9 KiB libffi aarch64 3.4.6-3.fc42 fedora 282.4 KiB libgcc aarch64 15.0.0-0.2.fc42 https_dmalcolm_fedorapeople_org_gcc_gcc_15_mass_prebuild_arch 218.8 KiB libgomp aarch64 15.0.0-0.2.fc42 https_dmalcolm_fedorapeople_org_gcc_gcc_15_mass_prebuild_arch 501.0 KiB libidn2 aarch64 2.3.7-2.fc41 fedora 457.2 KiB libmount aarch64 2.40.2-8.fc42 fedora 483.9 KiB libnghttp2 aarch64 1.64.0-1.fc42 fedora 262.2 KiB libnsl2 aarch64 2.0.1-2.fc41 fedora 222.0 KiB libpkgconf aarch64 2.3.0-1.fc42 fedora 198.1 KiB libpsl aarch64 0.21.5-4.fc41 fedora 196.6 KiB libpwquality aarch64 1.4.5-11.fc41 fedora 1.1 MiB libselinux aarch64 3.8-0.rc1.2.fc42 fedora 195.6 KiB libsemanage aarch64 3.8-0.rc1.1.fc42 fedora 353.3 KiB libsepol aarch64 3.8-0.rc1.1.fc42 fedora 809.9 KiB libsmartcols aarch64 2.40.2-8.fc42 fedora 288.5 KiB libssh aarch64 0.11.1-1.fc42 fedora 649.6 KiB libssh-config noarch 0.11.1-1.fc42 fedora 277.0 B libstdc++ aarch64 15.0.0-0.2.fc42 https_dmalcolm_fedorapeople_org_gcc_gcc_15_mass_prebuild_arch 2.7 MiB libtasn1 aarch64 4.19.0-9.fc41 fedora 283.8 KiB libtirpc aarch64 1.3.6-1.fc42 fedora 212.9 KiB libtool-ltdl aarch64 2.5.4-1.fc42 copr_base 92.1 KiB libunistring aarch64 1.1-8.fc41 fedora 1.8 MiB libuuid aarch64 2.40.2-8.fc42 fedora 197.5 KiB libverto aarch64 0.3.2-9.fc41 fedora 197.5 KiB libxcrypt aarch64 4.4.36-11.fc42 fedora 271.5 KiB libxml2 aarch64 2.12.8-2.fc41 fedora 2.1 MiB libzstd aarch64 1.5.6-2.fc41 fedora 796.0 KiB lua-libs aarch64 5.4.7-1.fc42 fedora 393.1 KiB lua-srpm-macros noarch 1-14.fc41 fedora 1.3 KiB lz4-libs aarch64 1.10.0-1.fc41 fedora 261.6 KiB mpfr aarch64 4.2.1-5.fc41 fedora 818.9 KiB ncurses-base noarch 6.5-2.20240629.fc41 fedora 326.3 KiB ncurses-libs aarch64 6.5-2.20240629.fc41 fedora 2.2 MiB ocaml-srpm-macros noarch 10-3.fc41 fedora 1.9 KiB openblas-srpm-macros noarch 2-18.fc41 fedora 112.0 B openldap aarch64 2.6.8-6.fc42 fedora 747.0 KiB openssl-libs aarch64 1:3.2.2-8.fc42 fedora 7.2 MiB p11-kit aarch64 0.25.5-4.fc42 fedora 2.6 MiB p11-kit-trust aarch64 0.25.5-4.fc42 fedora 655.7 KiB package-notes-srpm-macros noarch 0.5-12.fc41 fedora 1.6 KiB pam aarch64 1.7.0-3.fc42 fedora 4.3 MiB pam-libs aarch64 1.7.0-3.fc42 fedora 223.4 KiB pcre2 aarch64 10.44-1.fc41.1 fedora 905.5 KiB pcre2-syntax noarch 10.44-1.fc41.1 fedora 251.6 KiB perl-srpm-macros noarch 1-56.fc41 fedora 861.0 B pkgconf aarch64 2.3.0-1.fc42 fedora 240.6 KiB pkgconf-m4 noarch 2.3.0-1.fc42 fedora 14.4 KiB pkgconf-pkg-config aarch64 2.3.0-1.fc42 fedora 990.0 B popt aarch64 1.19-7.fc41 fedora 272.9 KiB publicsuffix-list-dafsa noarch 20240107-4.fc41 fedora 67.5 KiB pyproject-srpm-macros noarch 1.16.3-1.fc42 fedora 1.9 KiB python-srpm-macros noarch 3.13-3.fc41 fedora 51.0 KiB qt5-srpm-macros noarch 5.15.15-1.fc42 fedora 500.0 B qt6-srpm-macros noarch 6.8.1-4.fc42 fedora 456.0 B readline aarch64 8.2-11.fc42 fedora 753.3 KiB rpm aarch64 4.20.0-1.fc42 fedora 3.9 MiB rpm-build-libs aarch64 4.20.0-1.fc42 fedora 262.7 KiB rpm-libs aarch64 4.20.0-1.fc42 fedora 797.9 KiB rpm-sequoia aarch64 1.7.0-3.fc42 fedora 2.2 MiB rust-srpm-macros noarch 26.3-3.fc42 fedora 4.8 KiB setup noarch 2.15.0-5.fc41 fedora 720.7 KiB sqlite-libs aarch64 3.47.2-1.fc42 fedora 1.4 MiB systemd-libs aarch64 257-1.fc42 fedora 2.4 MiB util-linux-core aarch64 2.40.2-8.fc42 fedora 6.2 MiB xxhash-libs aarch64 0.8.2-4.fc42 fedora 212.3 KiB xz-libs aarch64 1:5.6.3-2.fc42 fedora 266.4 KiB zig-srpm-macros noarch 1-3.fc41 fedora 1.1 KiB zip aarch64 3.0-41.fc41 fedora 1.1 MiB zlib-ng-compat aarch64 2.2.2-1.fc42 fedora 133.8 KiB zstd aarch64 1.5.6-2.fc41 fedora 1.7 MiB Installing groups: Buildsystem building group Transaction Summary: Installing: 155 packages Total size of inbound packages is 51 MiB. Need to download 0 B. After this operation, 233 MiB extra will be used (install 233 MiB, remove 0 B). [1/1] tar-2:1.35-4.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [1/1] Total 100% | 0.0 B/s | 0.0 B | 00m00s [1/2] rpm-build-0:4.20.0-1.fc42.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [2/2] Total 100% | 0.0 B/s | 0.0 B | 00m00s [1/3] unzip-0:6.0-65.fc42.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [3/3] Total 100% | 0.0 B/s | 0.0 B | 00m00s [1/4] cpio-0:2.15-2.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [4/4] Total 100% | 0.0 B/s | 0.0 B | 00m00s [1/5] which-0:2.21-42.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [5/5] Total 100% | 0.0 B/s | 0.0 B | 00m00s [1/6] bash-0:5.2.37-1.fc42.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [6/6] Total 100% | 0.0 B/s | 0.0 B | 00m00s [1/7] patch-0:2.7.6-25.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [7/7] Total 100% | 0.0 B/s | 0.0 B | 00m00s [1/8] sed-0:4.9-3.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [8/8] Total 100% | 0.0 B/s | 0.0 B | 00m00s [1/9] shadow-utils-2:4.17.0~rc1-1.fc42. 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [9/9] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/10] util-linux-0:2.40.2-8.fc42.aarc 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [10/10] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/11] fedora-release-common-0:42-0.11 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [11/11] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/12] gawk-0:5.3.0-4.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [12/12] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/13] glibc-minimal-langpack-0:2.40.9 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [13/13] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/14] info-0:7.1.1-2.fc42.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded 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00m00s [ 1/19] grep-0:3.11-9.fc42.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [19/19] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/20] diffutils-0:3.10-8.fc42.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [20/20] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/21] findutils-1:4.10.0-4.fc42.aarch 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [21/21] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/22] gzip-0:1.13-2.fc42.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [22/22] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/23] glibc-0:2.40.9000-21.fc42.aarch 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded 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Already downloaded -------------------------------------------------------------------------------- [153/153] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/154] libtool-ltdl-0:2.5.4-1.fc42.a 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [154/154] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/155] libbrotli-0:1.1.0-5.fc42.aarc 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [155/155] Total 100% | 0.0 B/s | 0.0 B | 00m00s Running transaction Importing OpenPGP key 0x105EF944: UserID : "Fedora (42) " Fingerprint: B0F4950458F69E1150C6C5EDC8AC4916105EF944 From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-42-primary The key was successfully imported. Importing OpenPGP key 0x105EF944: UserID : "Fedora (42) " Fingerprint: B0F4950458F69E1150C6C5EDC8AC4916105EF944 From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-42-primary The key was successfully imported. Importing OpenPGP key 0xE99D6AD1: UserID : "Fedora (41) " Fingerprint: 466CF2D8B60BC3057AA9453ED0622462E99D6AD1 From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-41-primary The key was successfully imported. Importing OpenPGP key 0x31645531: UserID : "Fedora (43) " Fingerprint: C6E7F081CF80E13146676E88829B606631645531 From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-43-primary The key was successfully imported. 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100% | 0.0 B/s | 776.0 B | 00m00s [138/157] Installing perl-srpm-macros-0 100% | 0.0 B/s | 1.1 KiB | 00m00s [139/157] Installing package-notes-srpm 100% | 0.0 B/s | 2.0 KiB | 00m00s [140/157] Installing openblas-srpm-macr 100% | 0.0 B/s | 392.0 B | 00m00s [141/157] Installing ocaml-srpm-macros- 100% | 0.0 B/s | 2.2 KiB | 00m00s [142/157] Installing kernel-srpm-macros 100% | 0.0 B/s | 2.3 KiB | 00m00s [143/157] Installing gnat-srpm-macros-0 100% | 0.0 B/s | 1.3 KiB | 00m00s [144/157] Installing ghc-srpm-macros-0: 100% | 0.0 B/s | 1.0 KiB | 00m00s [145/157] Installing fpc-srpm-macros-0: 100% | 0.0 B/s | 420.0 B | 00m00s [146/157] Installing ansible-srpm-macro 100% | 0.0 B/s | 36.2 KiB | 00m00s [147/157] Installing fonts-srpm-macros- 100% | 55.7 MiB/s | 57.0 KiB | 00m00s [148/157] Installing forge-srpm-macros- 100% | 39.3 MiB/s | 40.3 KiB | 00m00s [149/157] Installing go-srpm-macros-0:3 100% | 60.5 MiB/s | 62.0 KiB | 00m00s [150/157] Installing python-srpm-macros 100% | 50.9 MiB/s | 52.2 KiB | 00m00s [151/157] Installing redhat-rpm-config- 100% | 62.9 MiB/s | 193.2 KiB | 00m00s [152/157] Installing rpm-build-0:4.20.0 100% | 349.3 MiB/s | 1.4 MiB | 00m00s [153/157] Installing pyproject-srpm-mac 100% | 1.2 MiB/s | 2.5 KiB | 00m00s [154/157] Installing util-linux-0:2.40. 100% | 353.2 MiB/s | 17.0 MiB | 00m00s [155/157] Installing authselect-0:1.5.0 100% | 102.2 MiB/s | 313.9 KiB | 00m00s [156/157] Installing which-0:2.21-42.fc 100% | 122.2 MiB/s | 250.4 KiB | 00m00s [157/157] Installing info-0:7.1.1-2.fc4 100% | 276.3 KiB/s | 614.0 KiB | 00m02s Warning: skipped OpenPGP checks for 34 packages from repositories: copr_base, https_dmalcolm_fedorapeople_org_gcc_gcc_15_mass_prebuild_arch Complete! Finish: installing minimal buildroot with dnf5 Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: add-determinism-0.4.3-1.fc42.aarch64 alternatives-1.30-1.fc42.aarch64 ansible-srpm-macros-1-16.fc41.noarch audit-libs-4.0.2-1.fc42.aarch64 authselect-1.5.0-8.fc42.aarch64 authselect-libs-1.5.0-8.fc42.aarch64 basesystem-11-21.fc41.noarch bash-5.2.37-1.fc42.aarch64 binutils-2.43.50-9.fc42.aarch64 build-reproducibility-srpm-macros-0.4.3-1.fc42.noarch bzip2-1.0.8-19.fc42.aarch64 bzip2-libs-1.0.8-19.fc42.aarch64 ca-certificates-2024.2.69_v8.0.401-3.fc42.noarch coreutils-9.5-11.fc42.aarch64 coreutils-common-9.5-11.fc42.aarch64 cpio-2.15-2.fc41.aarch64 cracklib-2.9.11-6.fc42.aarch64 crypto-policies-20241128-1.gitbb7b0b0.fc42.noarch curl-8.10.1-2.fc42.aarch64 cyrus-sasl-lib-2.1.28-27.fc41.aarch64 debugedit-5.1-2.fc42.aarch64 diffutils-3.10-8.fc42.aarch64 dwz-0.15-8.fc42.aarch64 ed-1.20.2-2.fc41.aarch64 efi-srpm-macros-5-13.fc42.noarch elfutils-0.192-7.fc42.aarch64 elfutils-debuginfod-client-0.192-7.fc42.aarch64 elfutils-default-yama-scope-0.192-7.fc42.noarch elfutils-libelf-0.192-7.fc42.aarch64 elfutils-libs-0.192-7.fc42.aarch64 fedora-gpg-keys-42-0.3.noarch fedora-release-42-0.11.noarch fedora-release-common-42-0.11.noarch fedora-release-identity-basic-42-0.11.noarch fedora-repos-42-0.3.noarch fedora-repos-rawhide-42-0.3.noarch file-5.45-8.fc42.aarch64 file-libs-5.45-8.fc42.aarch64 filesystem-3.18-29.fc42.aarch64 filesystem-srpm-macros-3.18-29.fc42.noarch findutils-4.10.0-4.fc42.aarch64 fonts-srpm-macros-2.0.5-17.fc41.noarch forge-srpm-macros-0.4.0-1.fc42.noarch fpc-srpm-macros-1.3-13.fc41.noarch gawk-5.3.0-4.fc41.aarch64 gdb-minimal-15.2-4.fc42.aarch64 gdbm-1.23-7.fc41.aarch64 gdbm-libs-1.23-7.fc41.aarch64 ghc-srpm-macros-1.9.2-1.fc42.noarch glibc-2.40.9000-21.fc42.aarch64 glibc-common-2.40.9000-21.fc42.aarch64 glibc-gconv-extra-2.40.9000-21.fc42.aarch64 glibc-minimal-langpack-2.40.9000-21.fc42.aarch64 gmp-6.3.0-2.fc41.aarch64 gnat-srpm-macros-6-6.fc41.noarch go-srpm-macros-3.6.0-5.fc42.noarch gpg-pubkey-105ef944-65ca83d1 gpg-pubkey-31645531-66b6dccf gpg-pubkey-e99d6ad1-64d2612c grep-3.11-9.fc42.aarch64 gzip-1.13-2.fc42.aarch64 info-7.1.1-2.fc42.aarch64 jansson-2.14-1.fc42.aarch64 json-c-0.18-1.fc42.aarch64 kernel-srpm-macros-1.0-24.fc41.noarch keyutils-libs-1.6.3-4.fc42.aarch64 krb5-libs-1.21.3-3.fc42.aarch64 libacl-2.3.2-2.fc41.aarch64 libarchive-3.7.7-1.fc42.aarch64 libattr-2.5.2-4.fc41.aarch64 libblkid-2.40.2-8.fc42.aarch64 libbrotli-1.1.0-5.fc42.aarch64 libcap-2.71-1.fc42.aarch64 libcap-ng-0.8.5-3.fc42.aarch64 libcom_err-1.47.1-6.fc42.aarch64 libcurl-8.10.1-2.fc42.aarch64 libeconf-0.7.5-1.fc42.aarch64 libevent-2.1.12-14.fc42.aarch64 libfdisk-2.40.2-8.fc42.aarch64 libffi-3.4.6-3.fc42.aarch64 libgcc-15.0.0-0.2.fc42.aarch64 libgomp-15.0.0-0.2.fc42.aarch64 libidn2-2.3.7-2.fc41.aarch64 libmount-2.40.2-8.fc42.aarch64 libnghttp2-1.64.0-1.fc42.aarch64 libnsl2-2.0.1-2.fc41.aarch64 libpkgconf-2.3.0-1.fc42.aarch64 libpsl-0.21.5-4.fc41.aarch64 libpwquality-1.4.5-11.fc41.aarch64 libselinux-3.8-0.rc1.2.fc42.aarch64 libsemanage-3.8-0.rc1.1.fc42.aarch64 libsepol-3.8-0.rc1.1.fc42.aarch64 libsmartcols-2.40.2-8.fc42.aarch64 libssh-0.11.1-1.fc42.aarch64 libssh-config-0.11.1-1.fc42.noarch libstdc++-15.0.0-0.2.fc42.aarch64 libtasn1-4.19.0-9.fc41.aarch64 libtirpc-1.3.6-1.fc42.aarch64 libtool-ltdl-2.5.4-1.fc42.aarch64 libunistring-1.1-8.fc41.aarch64 libuuid-2.40.2-8.fc42.aarch64 libverto-0.3.2-9.fc41.aarch64 libxcrypt-4.4.36-11.fc42.aarch64 libxml2-2.12.8-2.fc41.aarch64 libzstd-1.5.6-2.fc41.aarch64 lua-libs-5.4.7-1.fc42.aarch64 lua-srpm-macros-1-14.fc41.noarch lz4-libs-1.10.0-1.fc41.aarch64 mpfr-4.2.1-5.fc41.aarch64 ncurses-base-6.5-2.20240629.fc41.noarch ncurses-libs-6.5-2.20240629.fc41.aarch64 ocaml-srpm-macros-10-3.fc41.noarch openblas-srpm-macros-2-18.fc41.noarch openldap-2.6.8-6.fc42.aarch64 openssl-libs-3.2.2-8.fc42.aarch64 p11-kit-0.25.5-4.fc42.aarch64 p11-kit-trust-0.25.5-4.fc42.aarch64 package-notes-srpm-macros-0.5-12.fc41.noarch pam-1.7.0-3.fc42.aarch64 pam-libs-1.7.0-3.fc42.aarch64 patch-2.7.6-25.fc41.aarch64 pcre2-10.44-1.fc41.1.aarch64 pcre2-syntax-10.44-1.fc41.1.noarch perl-srpm-macros-1-56.fc41.noarch pkgconf-2.3.0-1.fc42.aarch64 pkgconf-m4-2.3.0-1.fc42.noarch pkgconf-pkg-config-2.3.0-1.fc42.aarch64 popt-1.19-7.fc41.aarch64 publicsuffix-list-dafsa-20240107-4.fc41.noarch pyproject-srpm-macros-1.16.3-1.fc42.noarch python-srpm-macros-3.13-3.fc41.noarch qt5-srpm-macros-5.15.15-1.fc42.noarch qt6-srpm-macros-6.8.1-4.fc42.noarch readline-8.2-11.fc42.aarch64 redhat-rpm-config-300-1.no_annobin.0.fc42.noarch rpm-4.20.0-1.fc42.aarch64 rpm-build-4.20.0-1.fc42.aarch64 rpm-build-libs-4.20.0-1.fc42.aarch64 rpm-libs-4.20.0-1.fc42.aarch64 rpm-sequoia-1.7.0-3.fc42.aarch64 rust-srpm-macros-26.3-3.fc42.noarch sed-4.9-3.fc41.aarch64 setup-2.15.0-5.fc41.noarch shadow-utils-4.17.0~rc1-1.fc42.aarch64 sqlite-libs-3.47.2-1.fc42.aarch64 systemd-libs-257-1.fc42.aarch64 tar-1.35-4.fc41.aarch64 unzip-6.0-65.fc42.aarch64 util-linux-2.40.2-8.fc42.aarch64 util-linux-core-2.40.2-8.fc42.aarch64 which-2.21-42.fc41.aarch64 xxhash-libs-0.8.2-4.fc42.aarch64 xz-5.6.3-2.fc42.aarch64 xz-libs-5.6.3-2.fc42.aarch64 zig-srpm-macros-1-3.fc41.noarch zip-3.0-41.fc41.aarch64 zlib-ng-compat-2.2.2-1.fc42.aarch64 zstd-1.5.6-2.fc41.aarch64 Start: buildsrpm Start: rpmbuild -bs Building target platforms: aarch64 Building for target aarch64 warning: line 25: Possible unexpanded macro in: Requires: libint(api)(aarch-64) = %{_libint_apiversion} setting SOURCE_DATE_EPOCH=1721260800 Wrote: /builddir/build/SRPMS/libghemical-3.0.0-25.fc42.src.rpm RPM build warnings: line 25: Possible unexpanded macro in: Requires: libint(api)(aarch-64) = %{_libint_apiversion} Finish: rpmbuild -bs INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-aarch64-1733964338.291873/root/var/log/dnf5.log INFO: chroot_scan: creating tarball /var/lib/copr-rpmbuild/results/chroot_scan.tar.gz /bin/tar: Removing leading `/' from member names Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-xxqbc24c/libghemical/libghemical.spec) Config(child) 0 minutes 12 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/libghemical-3.0.0-25.fc42.src.rpm) Config(fedora-rawhide-aarch64) Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-aarch64-bootstrap-1733964338.291873/root. INFO: reusing tmpfs at /var/lib/mock/fedora-rawhide-aarch64-bootstrap-1733964338.291873/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-aarch64-1733964338.291873/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.20.0-1.fc42.aarch64 rpm-sequoia-1.7.0-3.fc42.aarch64 dnf5-5.2.8.1-1.fc42.aarch64 dnf5-plugins-5.2.8.1-1.fc42.aarch64 Finish: chroot init Start: build phase for libghemical-3.0.0-25.fc42.src.rpm Start: build setup for libghemical-3.0.0-25.fc42.src.rpm Building target platforms: aarch64 Building for target aarch64 warning: line 25: Possible unexpanded macro in: Requires: libint(api)(aarch-64) = %{_libint_apiversion} setting SOURCE_DATE_EPOCH=1721260800 Wrote: /builddir/build/SRPMS/libghemical-3.0.0-25.fc42.src.rpm RPM build warnings: line 25: Possible unexpanded macro in: Requires: libint(api)(aarch-64) = %{_libint_apiversion} Updating and loading repositories: Copr repository 100% | 90.4 KiB/s | 1.5 KiB | 00m00s Additional repo https_dmalcolm_fedorap 100% | 25.4 KiB/s | 1.5 KiB | 00m00s fedora 100% | 41.3 KiB/s | 10.2 KiB | 00m00s Repositories loaded. Package Arch Version Repository Size Installing: flex aarch64 2.6.4-18.fc42 copr_base 814.6 KiB flexiblas-devel aarch64 3.4.4-3.fc42 copr_base 4.9 MiB gcc-c++ aarch64 15.0.0-0.2.fc42 https_dmalcolm_fedorapeople_org_gcc_gcc_15_mass_prebuild_arch 38.5 MiB gcc-gfortran aarch64 15.0.0-0.2.fc42 https_dmalcolm_fedorapeople_org_gcc_gcc_15_mass_prebuild_arch 36.3 MiB glib2-devel aarch64 2.83.0-2.fc42 copr_base 16.0 MiB intltool noarch 0.51.0-27.fc41 fedora 169.1 KiB libint-devel aarch64 1.2.1-21.fc41 fedora 532.7 KiB libtool aarch64 2.5.4-1.fc42 copr_base 2.7 MiB make aarch64 1:4.4.1-9.fc42 fedora 1.8 MiB mesa-libGLU-devel aarch64 9.0.3-5.fc41 fedora 17.0 KiB mopac7-devel aarch64 1.15-47.fc41 fedora 28.0 KiB mpqc-devel aarch64 2.3.1-59.fc41 fedora 2.6 MiB Installing dependencies: annobin-docs noarch 12.77-1.fc42 fedora 98.4 KiB annobin-plugin-gcc aarch64 12.77-1.fc42 fedora 1.0 MiB autoconf noarch 2.72-3.fc42 copr_base 2.8 MiB automake noarch 1.17-1.fc42 fedora 1.8 MiB cmake-filesystem aarch64 3.31.2-1.fc42 copr_base 0.0 B cpp aarch64 15.0.0-0.2.fc42 https_dmalcolm_fedorapeople_org_gcc_gcc_15_mass_prebuild_arch 35.3 MiB emacs-filesystem noarch 1:30.0-3.fc41 fedora 0.0 B expat aarch64 2.6.4-1.fc42 copr_base 343.6 KiB flexiblas aarch64 3.4.4-3.fc42 copr_base 48.5 KiB flexiblas-netlib aarch64 3.4.4-3.fc42 copr_base 9.1 MiB flexiblas-netlib64 aarch64 3.4.4-3.fc42 copr_base 9.0 MiB flexiblas-openblas-openmp aarch64 3.4.4-3.fc42 copr_base 66.3 KiB flexiblas-openblas-openmp64 aarch64 3.4.4-3.fc42 copr_base 66.3 KiB gcc aarch64 15.0.0-0.2.fc42 https_dmalcolm_fedorapeople_org_gcc_gcc_15_mass_prebuild_arch 97.8 MiB gcc-plugin-annobin aarch64 15.0.0-0.2.fc42 https_dmalcolm_fedorapeople_org_gcc_gcc_15_mass_prebuild_arch 67.5 KiB gettext aarch64 0.22.5-6.fc42 copr_base 5.8 MiB gettext-common-devel noarch 0.22.5-6.fc42 copr_base 586.5 KiB gettext-devel aarch64 0.22.5-6.fc42 copr_base 1.0 MiB gettext-envsubst aarch64 0.22.5-6.fc42 copr_base 105.3 KiB gettext-libs aarch64 0.22.5-6.fc42 copr_base 1.7 MiB gettext-runtime aarch64 0.22.5-6.fc42 copr_base 534.3 KiB glib2 aarch64 2.83.0-2.fc42 copr_base 15.4 MiB glibc-devel aarch64 2.40.9000-21.fc42 fedora 2.2 MiB gnutls aarch64 3.8.8-1.fc42 copr_base 3.3 MiB groff-base aarch64 1.23.0-7.fc42 copr_base 4.1 MiB hwdata noarch 0.390-1.fc42 fedora 9.3 MiB kernel-headers aarch64 6.13.0-0.rc1.e70140ba0d2b.14.fc42 fedora 6.4 MiB libX11 aarch64 1.8.10-2.fc42 fedora 1.3 MiB libX11-common noarch 1.8.10-2.fc42 fedora 1.1 MiB libX11-devel aarch64 1.8.10-2.fc42 fedora 1.0 MiB libX11-xcb aarch64 1.8.10-2.fc42 fedora 195.1 KiB libXau aarch64 1.0.11-7.fc41 fedora 242.9 KiB libXau-devel aarch64 1.0.11-7.fc41 fedora 6.4 KiB libXext aarch64 1.3.6-2.fc41 fedora 210.0 KiB libXxf86vm aarch64 1.1.5-7.fc41 fedora 197.4 KiB libasan aarch64 15.0.0-0.2.fc42 https_dmalcolm_fedorapeople_org_gcc_gcc_15_mass_prebuild_arch 1.5 MiB libatomic aarch64 15.0.0-0.2.fc42 https_dmalcolm_fedorapeople_org_gcc_gcc_15_mass_prebuild_arch 66.1 KiB libb2 aarch64 0.98.1-12.fc42 copr_base 72.8 KiB libblkid-devel aarch64 2.40.2-8.fc42 fedora 44.9 KiB libderiv aarch64 1.2.1-21.fc41 fedora 39.7 MiB libdrm aarch64 2.4.124-1.fc42 copr_base 744.4 KiB libedit aarch64 3.1-53.20240808cvs.fc42 copr_base 275.2 KiB libffi-devel aarch64 3.4.6-3.fc42 fedora 29.9 KiB libgfortran aarch64 15.0.0-0.2.fc42 https_dmalcolm_fedorapeople_org_gcc_gcc_15_mass_prebuild_arch 1.7 MiB libglvnd aarch64 1:1.7.0-5.fc41 fedora 1.5 MiB libglvnd-core-devel aarch64 1:1.7.0-5.fc41 fedora 40.3 KiB libglvnd-devel aarch64 1:1.7.0-5.fc41 fedora 2.1 MiB libglvnd-egl aarch64 1:1.7.0-5.fc41 fedora 196.9 KiB libglvnd-gles aarch64 1:1.7.0-5.fc41 fedora 650.3 KiB libglvnd-glx aarch64 1:1.7.0-5.fc41 fedora 1.2 MiB libglvnd-opengl aarch64 1:1.7.0-5.fc41 fedora 457.1 KiB libint aarch64 1.2.1-21.fc41 fedora 143.7 MiB libmount-devel aarch64 2.40.2-8.fc42 fedora 63.5 KiB libmpc aarch64 1.3.1-6.fc41 fedora 280.8 KiB libpciaccess aarch64 0.16-13.fc41 fedora 200.7 KiB libr12 aarch64 1.2.1-21.fc41 fedora 13.0 MiB libselinux-devel aarch64 3.8-0.rc1.2.fc42 fedora 126.6 KiB libsepol-devel aarch64 3.8-0.rc1.1.fc42 fedora 120.8 KiB libstdc++-devel aarch64 15.0.0-0.2.fc42 https_dmalcolm_fedorapeople_org_gcc_gcc_15_mass_prebuild_arch 15.4 MiB libtextstyle aarch64 0.22.5-6.fc42 copr_base 194.6 KiB libubsan aarch64 15.0.0-0.2.fc42 https_dmalcolm_fedorapeople_org_gcc_gcc_15_mass_prebuild_arch 460.6 KiB libwayland-client aarch64 1.23.0-2.fc41 fedora 198.2 KiB libwayland-server aarch64 1.23.0-2.fc41 fedora 198.7 KiB libxcb aarch64 1.17.0-3.fc42 fedora 5.0 MiB libxcb-devel aarch64 1.17.0-3.fc42 fedora 2.7 MiB libxcrypt-devel aarch64 4.4.36-11.fc42 fedora 30.5 KiB libxshmfence aarch64 1.3.2-5.fc42 fedora 68.8 KiB llvm-libs aarch64 19.1.5-1.fc42 fedora 113.7 MiB lm_sensors-libs aarch64 3.6.0-20.fc41 fedora 221.9 KiB m4 aarch64 1.4.19-10.fc41 fedora 668.7 KiB mailcap noarch 2.1.54-7.fc41 fedora 86.0 KiB mesa-dri-drivers aarch64 24.3.1-1.fc42 fedora 102.4 MiB mesa-filesystem aarch64 24.3.1-1.fc42 fedora 3.6 KiB mesa-libEGL aarch64 24.3.1-1.fc42 fedora 387.7 KiB mesa-libGL aarch64 24.3.1-1.fc42 fedora 579.0 KiB mesa-libGLU aarch64 9.0.3-5.fc41 fedora 393.6 KiB mesa-libgbm aarch64 24.3.1-1.fc42 fedora 132.7 KiB mesa-libglapi aarch64 24.3.1-1.fc42 fedora 322.3 KiB mopac7-libs aarch64 1.15-47.fc41 fedora 2.8 MiB mpdecimal aarch64 2.5.1-16.fc41 fedora 328.9 KiB mpqc-data noarch 2.3.1-59.fc41 fedora 1.9 MiB mpqc-libs aarch64 2.3.1-59.fc41 fedora 10.0 MiB ncurses aarch64 6.5-2.20240629.fc41 fedora 1.7 MiB nettle aarch64 3.10-3.fc41 fedora 956.7 KiB openblas aarch64 0.3.28-2.fc42 fedora 106.6 KiB openblas-openmp aarch64 0.3.28-2.fc42 fedora 20.6 MiB openblas-openmp64 aarch64 0.3.28-2.fc42 fedora 20.4 MiB pcre2-devel aarch64 10.44-1.fc41.1 fedora 2.0 MiB pcre2-utf16 aarch64 10.44-1.fc41.1 fedora 645.9 KiB pcre2-utf32 aarch64 10.44-1.fc41.1 fedora 645.8 KiB perl-AutoLoader noarch 5.74-512.fc42 fedora 20.5 KiB perl-B aarch64 1.89-512.fc42 fedora 606.1 KiB perl-Carp noarch 1.54-511.fc41 fedora 46.6 KiB perl-Class-Struct noarch 0.68-512.fc42 fedora 25.4 KiB perl-Clone aarch64 0.47-1.fc42 fedora 208.6 KiB perl-Compress-Raw-Bzip2 aarch64 2.213-1.fc42 fedora 227.5 KiB perl-Compress-Raw-Zlib aarch64 2.213-1.fc42 fedora 287.4 KiB perl-Data-Dump noarch 1.25-11.fc41 fedora 50.2 KiB perl-Data-Dumper aarch64 2.189-512.fc41 fedora 263.8 KiB perl-Digest noarch 1.20-511.fc41 fedora 35.3 KiB perl-Digest-HMAC noarch 1.05-1.fc42 fedora 29.5 KiB perl-Digest-MD5 aarch64 2.59-5.fc41 fedora 231.9 KiB perl-Digest-SHA aarch64 1:6.04-512.fc41 fedora 264.7 KiB perl-DynaLoader aarch64 1.56-512.fc42 fedora 32.1 KiB perl-Encode aarch64 4:3.21-511.fc41 fedora 5.9 MiB perl-Encode-Locale noarch 1.05-30.fc41 fedora 19.0 KiB perl-Errno aarch64 1.38-512.fc42 fedora 8.4 KiB perl-Exporter noarch 5.78-511.fc41 fedora 54.3 KiB perl-Fcntl aarch64 1.18-512.fc42 fedora 221.1 KiB perl-File-Basename noarch 2.86-512.fc42 fedora 14.0 KiB perl-File-Compare noarch 1.100.800-512.fc42 fedora 5.6 KiB perl-File-Copy noarch 2.41-512.fc42 fedora 19.6 KiB perl-File-Find noarch 1.44-512.fc42 fedora 41.9 KiB perl-File-Listing noarch 6.16-4.fc41 fedora 41.2 KiB perl-File-Path noarch 2.18-511.fc41 fedora 63.5 KiB perl-File-Temp noarch 1:0.231.100-511.fc41 fedora 162.3 KiB perl-File-stat noarch 1.14-512.fc42 fedora 12.5 KiB perl-FileHandle noarch 2.05-512.fc42 fedora 9.3 KiB perl-Getopt-Long noarch 1:2.58-2.fc41 fedora 144.5 KiB perl-Getopt-Std noarch 1.14-512.fc42 fedora 11.2 KiB perl-HTML-Parser aarch64 3.83-1.fc41 fedora 421.9 KiB perl-HTML-Tagset noarch 3.24-2.fc41 fedora 18.7 KiB perl-HTTP-Cookies noarch 6.11-4.fc41 fedora 73.4 KiB perl-HTTP-Date noarch 6.06-5.fc41 fedora 41.2 KiB perl-HTTP-Message noarch 7.00-1.fc42 fedora 215.3 KiB perl-HTTP-Negotiate noarch 6.01-39.fc41 fedora 27.6 KiB perl-HTTP-Tiny noarch 0.090-1.fc42 fedora 154.4 KiB perl-I18N-Langinfo aarch64 0.24-512.fc42 fedora 214.8 KiB perl-IO aarch64 1.55-512.fc42 fedora 319.2 KiB perl-IO-Compress noarch 2.213-2.fc42 fedora 1.0 MiB perl-IO-HTML noarch 1.004-13.fc41 fedora 45.2 KiB perl-IO-Socket-IP noarch 0.43-1.fc42 fedora 100.3 KiB perl-IO-Socket-SSL noarch 2.089-1.fc42 fedora 703.3 KiB perl-IPC-Open3 noarch 1.22-512.fc42 fedora 22.5 KiB perl-LWP-MediaTypes noarch 6.04-19.fc41 fedora 79.0 KiB perl-MIME-Base32 noarch 1.303-21.fc41 fedora 30.7 KiB perl-MIME-Base64 aarch64 3.16-511.fc41 fedora 222.2 KiB perl-Module-Load noarch 1:0.36-511.fc41 fedora 14.9 KiB perl-NTLM noarch 1.09-39.fc41 fedora 31.2 KiB perl-Net-HTTP noarch 6.23-5.fc41 fedora 74.7 KiB perl-Net-SSLeay aarch64 1.94-7.fc41 fedora 1.4 MiB perl-POSIX aarch64 2.20-512.fc42 fedora 327.3 KiB perl-PathTools aarch64 3.91-511.fc41 fedora 352.1 KiB perl-Pod-Escapes noarch 1:1.07-511.fc41 fedora 24.9 KiB perl-Pod-Perldoc noarch 3.28.01-512.fc41 fedora 163.7 KiB perl-Pod-Simple noarch 1:3.45-511.fc41 fedora 560.9 KiB perl-Pod-Usage noarch 4:2.03-511.fc41 fedora 84.8 KiB perl-Scalar-List-Utils aarch64 5:1.68-1.fc42 fedora 281.0 KiB perl-SelectSaver noarch 1.02-512.fc42 fedora 2.2 KiB perl-Socket aarch64 4:2.038-511.fc41 fedora 272.1 KiB perl-Storable aarch64 1:3.32-511.fc41 fedora 372.5 KiB perl-Symbol noarch 1.09-512.fc42 fedora 6.8 KiB perl-Term-ANSIColor noarch 5.01-512.fc41 fedora 97.5 KiB perl-Term-Cap noarch 1.18-511.fc41 fedora 29.3 KiB perl-Text-ParseWords noarch 3.31-511.fc41 fedora 13.6 KiB perl-Text-Tabs+Wrap noarch 2024.001-511.fc41 fedora 22.6 KiB perl-Thread-Queue noarch 3.14-511.fc41 fedora 28.9 KiB perl-Time-Local noarch 2:1.350-511.fc41 fedora 69.0 KiB perl-TimeDate noarch 1:2.33-15.fc41 fedora 95.2 KiB perl-Try-Tiny noarch 0.32-1.fc42 fedora 67.3 KiB perl-URI noarch 5.31-1.fc42 fedora 257.0 KiB perl-WWW-RobotRules noarch 6.02-40.fc41 fedora 24.3 KiB perl-XML-Parser aarch64 2.47-5.fc41 fedora 769.4 KiB perl-base noarch 2.27-512.fc42 fedora 12.5 KiB perl-constant noarch 1.33-512.fc41 fedora 26.2 KiB perl-if noarch 0.61.000-512.fc42 fedora 5.8 KiB perl-interpreter aarch64 4:5.40.0-512.fc42 fedora 302.3 KiB perl-libnet noarch 3.15-512.fc41 fedora 289.4 KiB perl-libs aarch64 4:5.40.0-512.fc42 fedora 10.9 MiB perl-libwww-perl noarch 6.77-2.fc41 fedora 521.0 KiB perl-locale noarch 1.12-512.fc42 fedora 6.5 KiB perl-mro aarch64 1.29-512.fc42 fedora 209.7 KiB perl-overload noarch 1.37-512.fc42 fedora 71.5 KiB perl-overloading noarch 0.02-512.fc42 fedora 4.8 KiB perl-parent noarch 1:0.243-1.fc42 fedora 10.2 KiB perl-podlators noarch 1:6.0.2-2.fc41 fedora 317.5 KiB perl-subs noarch 1.04-512.fc42 fedora 2.1 KiB perl-threads aarch64 1:2.40-511.fc41 fedora 263.2 KiB perl-threads-shared aarch64 1.69-511.fc41 fedora 231.8 KiB perl-vars noarch 1.05-512.fc42 fedora 3.9 KiB python-pip-wheel noarch 24.3.1-1.fc42 fedora 1.2 MiB python3 aarch64 3.13.0-1.fc42 fedora 211.8 KiB python3-libs aarch64 3.13.0-1.fc42 fedora 49.7 MiB python3-packaging noarch 24.2-2.fc42 fedora 555.7 KiB spirv-tools-libs aarch64 2024.3-4.fc42 fedora 5.3 MiB sysprof-capture-devel aarch64 47.2-1.fc42 fedora 277.7 KiB tzdata noarch 2024a-9.fc41 fedora 1.7 MiB xorg-x11-proto-devel noarch 2024.1-3.fc41 fedora 1.7 MiB zlib-ng-compat-devel aarch64 2.2.2-1.fc42 fedora 106.8 KiB Transaction Summary: Installing: 201 packages Total size of inbound packages is 229 MiB. Need to download 68 MiB. After this operation, 921 MiB extra will be used (install 921 MiB, remove 0 B). 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Finish: build setup for libghemical-3.0.0-25.fc42.src.rpm Start: rpmbuild libghemical-3.0.0-25.fc42.src.rpm Building target platforms: aarch64 Building for target aarch64 setting SOURCE_DATE_EPOCH=1721260800 Executing(%mkbuilddir): /bin/sh -e /var/tmp/rpm-tmp.Anjw2d + umask 022 + cd /builddir/build/BUILD/libghemical-3.0.0-build + test -d /builddir/build/BUILD/libghemical-3.0.0-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/libghemical-3.0.0-build + /usr/bin/rm -rf /builddir/build/BUILD/libghemical-3.0.0-build + /usr/bin/mkdir -p /builddir/build/BUILD/libghemical-3.0.0-build + /usr/bin/mkdir -p /builddir/build/BUILD/libghemical-3.0.0-build/SPECPARTS + RPM_EC=0 ++ jobs -p + exit 0 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.oA6dvo + umask 022 + cd /builddir/build/BUILD/libghemical-3.0.0-build + cd /builddir/build/BUILD/libghemical-3.0.0-build + rm -rf libghemical-3.0.0 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/libghemical-3.0.0.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd libghemical-3.0.0 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.OU4I11 + umask 022 + cd /builddir/build/BUILD/libghemical-3.0.0-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd libghemical-3.0.0 + sed -i s/blas/flexiblas/g configure.ac + sed -i s/lapack/flexiblas/g configure.ac + autoreconf -ivf autoreconf: export WARNINGS= autoreconf: Entering directory '.' autoreconf: configure.ac: not using Gettext autoreconf: running: aclocal --force autoreconf: configure.ac: tracing autoreconf: running: libtoolize --copy --force libtoolize: putting auxiliary files in '.'. libtoolize: copying file './ltmain.sh' libtoolize: Consider adding 'AC_CONFIG_MACRO_DIRS([m4])' to configure.ac, libtoolize: and rerunning libtoolize and aclocal. libtoolize: Consider adding '-I m4' to ACLOCAL_AMFLAGS in Makefile.am. autoreconf: running: intltoolize --copy --force autoreconf: configure.ac: not using Gtkdoc autoreconf: running: aclocal --force autoreconf: running: /usr/bin/autoconf --force configure.ac:26: warning: 'AM_CONFIG_HEADER': this macro is obsolete. configure.ac:26: You should use the 'AC_CONFIG_HEADERS' macro instead. aclocal.m4:10954: AM_CONFIG_HEADER is expanded from... configure.ac:26: the top level configure.ac:32: warning: 'AM_CONFIG_HEADER': this macro is obsolete. configure.ac:32: You should use the 'AC_CONFIG_HEADERS' macro instead. aclocal.m4:10954: AM_CONFIG_HEADER is expanded from... configure.ac:32: the top level configure.ac:91: warning: The macro 'AC_PROG_LIBTOOL' is obsolete. configure.ac:91: You should run autoupdate. aclocal.m4:799: AC_PROG_LIBTOOL is expanded from... configure.ac:91: the top level configure.ac:105: warning: The macro 'GLIB_GNU_GETTEXT' is obsolete. configure.ac:105: You should run autoupdate. aclocal.m4:388: GLIB_GNU_GETTEXT is expanded from... aclocal.m4:488: AM_GLIB_GNU_GETTEXT is expanded from... configure.ac:105: the top level configure.ac:105: warning: The macro 'AC_TRY_LINK' is obsolete. configure.ac:105: You should run autoupdate. ./lib/autoconf/general.m4:2918: AC_TRY_LINK is expanded from... lib/m4sugar/m4sh.m4:690: _AS_IF_ELSE is expanded from... lib/m4sugar/m4sh.m4:697: AS_IF is expanded from... ./lib/autoconf/general.m4:2249: AC_CACHE_VAL is expanded from... ./lib/autoconf/general.m4:2270: AC_CACHE_CHECK is expanded from... aclocal.m4:73: GLIB_LC_MESSAGES is expanded from... aclocal.m4:388: GLIB_GNU_GETTEXT is expanded from... aclocal.m4:488: AM_GLIB_GNU_GETTEXT is expanded from... configure.ac:105: the top level configure.ac:105: warning: The macro 'AC_TRY_LINK' is obsolete. configure.ac:105: You should run autoupdate. ./lib/autoconf/general.m4:2918: AC_TRY_LINK is expanded from... lib/m4sugar/m4sh.m4:690: _AS_IF_ELSE is expanded from... lib/m4sugar/m4sh.m4:697: AS_IF is expanded from... ./lib/autoconf/general.m4:2249: AC_CACHE_VAL is expanded from... ./lib/autoconf/general.m4:2270: AC_CACHE_CHECK is expanded from... lib/m4sugar/m4sh.m4:697: AS_IF is expanded from... ./lib/autoconf/headers.m4:89: _AC_CHECK_HEADER_COMPILE is expanded from... ./lib/autoconf/headers.m4:56: AC_CHECK_HEADER is expanded from... aclocal.m4:172: GLIB_WITH_NLS is expanded from... aclocal.m4:388: GLIB_GNU_GETTEXT is expanded from... aclocal.m4:488: AM_GLIB_GNU_GETTEXT is expanded from... configure.ac:105: the top level configure.ac:105: warning: The macro 'AC_TRY_LINK' is obsolete. configure.ac:105: You should run autoupdate. ./lib/autoconf/general.m4:2918: AC_TRY_LINK is expanded from... lib/m4sugar/m4sh.m4:697: AS_IF is expanded from... ./lib/autoconf/headers.m4:89: _AC_CHECK_HEADER_COMPILE is expanded from... ./lib/autoconf/headers.m4:56: AC_CHECK_HEADER is expanded from... aclocal.m4:172: GLIB_WITH_NLS is expanded from... aclocal.m4:388: GLIB_GNU_GETTEXT is expanded from... aclocal.m4:488: AM_GLIB_GNU_GETTEXT is expanded from... configure.ac:105: the top level configure.ac:105: warning: The macro 'AC_OUTPUT_COMMANDS' is obsolete. configure.ac:105: You should run autoupdate. ./lib/autoconf/status.m4:1025: AC_OUTPUT_COMMANDS is expanded from... aclocal.m4:172: GLIB_WITH_NLS is expanded from... aclocal.m4:388: GLIB_GNU_GETTEXT is expanded from... aclocal.m4:488: AM_GLIB_GNU_GETTEXT is expanded from... configure.ac:105: the top level configure.ac:126: warning: The macro 'AC_TRY_RUN' is obsolete. configure.ac:126: You should run autoupdate. ./lib/autoconf/general.m4:2995: AC_TRY_RUN is expanded from... acinclude.m4:10: AM_PATH_SC is expanded from... configure.ac:126: the top level configure.ac:126: warning: The macro 'AC_TRY_LINK' is obsolete. configure.ac:126: You should run autoupdate. ./lib/autoconf/general.m4:2918: AC_TRY_LINK is expanded from... acinclude.m4:10: AM_PATH_SC is expanded from... configure.ac:126: the top level configure.ac:159: warning: The macro 'AC_PROG_CC_STDC' is obsolete. configure.ac:159: You should run autoupdate. ./lib/autoconf/c.m4:1669: AC_PROG_CC_STDC is expanded from... configure.ac:159: the top level configure.ac:171: warning: The macro 'AC_HEADER_STDC' is obsolete. configure.ac:171: You should run autoupdate. ./lib/autoconf/headers.m4:663: AC_HEADER_STDC is expanded from... configure.ac:171: the top level autoreconf: running: /usr/bin/autoheader --force autoreconf: running: automake --add-missing --copy --force-missing configure.ac:86: installing './compile' configure.ac:42: installing './missing' /usr/share/automake-1.17/am/ltlibrary.am: warning: 'libghemical.la': linking libtool libraries using a non-POSIX /usr/share/automake-1.17/am/ltlibrary.am: archiver requires 'AM_PROG_AR' in 'configure.ac' src/Makefile.am:1: while processing Libtool library 'libghemical.la' src/Makefile.am: installing './depcomp' autoreconf: Leaving directory '.' + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + '[' '-flto=auto -ffat-lto-objectsx' '!=' x ']' ++ find . -type f -name configure -print + for file in $(find . -type f -name configure -print) + /usr/bin/sed -r --in-place=.backup 's/^char \(\*f\) \(\) = /__attribute__ ((used)) char (*f) () = /g' ./configure + diff -u ./configure.backup ./configure + mv ./configure.backup ./configure + /usr/bin/sed -r --in-place=.backup 's/^char \(\*f\) \(\);/__attribute__ ((used)) char (*f) ();/g' ./configure + diff -u ./configure.backup ./configure + mv ./configure.backup ./configure + /usr/bin/sed -r --in-place=.backup 's/^char \$2 \(\);/__attribute__ ((used)) char \$2 ();/g' ./configure + diff -u ./configure.backup ./configure + mv ./configure.backup ./configure + /usr/bin/sed --in-place=.backup '1{$!N;$!N};$!N;s/int x = 1;\nint y = 0;\nint z;\nint nan;/volatile int x = 1; volatile int y = 0; volatile int z, nan;/;P;D' ./configure + diff -u ./configure.backup ./configure + mv ./configure.backup ./configure + /usr/bin/sed --in-place=.backup 's#^lt_cv_sys_global_symbol_to_cdecl=.*#lt_cv_sys_global_symbol_to_cdecl="sed -n -e '\''s/^T .* \\(.*\\)$/extern int \\1();/p'\'' -e '\''s/^$symcode* .* \\(.*\\)$/extern char \\1;/p'\''"#' ./configure + diff -u ./configure.backup ./configure --- ./configure.backup 2024-12-12 00:46:05.753979749 +0000 +++ ./configure 2024-12-12 00:46:06.595968988 +0000 @@ -8277,7 +8277,7 @@ # Transform an extracted symbol line into a proper C declaration. # Some systems (esp. on ia64) link data and code symbols differently, # so use this general approach. -lt_cv_sys_global_symbol_to_cdecl="$SED -n"\ +lt_cv_sys_global_symbol_to_cdecl="sed -n -e 's/^T .* \(.*\)$/extern int \1();/p' -e 's/^$symcode* .* \(.*\)$/extern char \1;/p'" $lt_cdecl_hook\ " -e 's/^T .* \(.*\)$/extern int \1();/p'"\ " -e 's/^$symcode$symcode* .* \(.*\)$/extern char \1;/p'" @@ -22212,7 +22212,7 @@ compiler='`$ECHO "$compiler" | $SED "$delay_single_quote_subst"`' GCC='`$ECHO "$GCC" | $SED "$delay_single_quote_subst"`' lt_cv_sys_global_symbol_pipe='`$ECHO "$lt_cv_sys_global_symbol_pipe" | $SED "$delay_single_quote_subst"`' -lt_cv_sys_global_symbol_to_cdecl='`$ECHO "$lt_cv_sys_global_symbol_to_cdecl" | $SED "$delay_single_quote_subst"`' +lt_cv_sys_global_symbol_to_cdecl="sed -n -e 's/^T .* \(.*\)$/extern int \1();/p' -e 's/^$symcode* .* \(.*\)$/extern char \1;/p'" lt_cv_sys_global_symbol_to_import='`$ECHO "$lt_cv_sys_global_symbol_to_import" | $SED "$delay_single_quote_subst"`' lt_cv_sys_global_symbol_to_c_name_address='`$ECHO "$lt_cv_sys_global_symbol_to_c_name_address" | $SED "$delay_single_quote_subst"`' lt_cv_sys_global_symbol_to_c_name_address_lib_prefix='`$ECHO "$lt_cv_sys_global_symbol_to_c_name_address_lib_prefix" | $SED "$delay_single_quote_subst"`' + '[' 1 = 1 ']' +++ dirname ./configure ++ find . -name config.guess -o -name config.sub + for i in $(find $(dirname ./configure) -name config.guess -o -name config.sub) ++ basename ./config.guess + '[' -f /usr/lib/rpm/redhat/config.guess ']' + /usr/bin/rm -f ./config.guess ++ basename ./config.guess + /usr/bin/cp -fv /usr/lib/rpm/redhat/config.guess ./config.guess '/usr/lib/rpm/redhat/config.guess' -> './config.guess' + for i in $(find $(dirname ./configure) -name config.guess -o -name config.sub) ++ basename ./config.sub + '[' -f /usr/lib/rpm/redhat/config.sub ']' + /usr/bin/rm -f ./config.sub ++ basename ./config.sub + /usr/bin/cp -fv /usr/lib/rpm/redhat/config.sub ./config.sub '/usr/lib/rpm/redhat/config.sub' -> './config.sub' + '[' 1 = 1 ']' + '[' x '!=' 'x-Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' ']' ++ find . -name ltmain.sh + for i in $(find . -name ltmain.sh) + /usr/bin/sed -i.backup -e 's~compiler_flags=$~compiler_flags="-Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld"~' ./ltmain.sh ++ grep -q runstatedir=DIR ./configure ++ echo --runstatedir=/run + ./configure --build=aarch64-redhat-linux --host=aarch64-redhat-linux --program-prefix= --disable-dependency-tracking --prefix=/usr --exec-prefix=/usr --bindir=/usr/bin --sbindir=/usr/sbin --sysconfdir=/etc --datadir=/usr/share --includedir=/usr/include --libdir=/usr/lib64 --libexecdir=/usr/libexec --localstatedir=/var --runstatedir=/run --sharedstatedir=/var/lib --mandir=/usr/share/man --infodir=/usr/share/info --enable-mopac7 --enable-mpqc --disable-static --disable-sctest checking for a BSD-compatible install... /usr/bin/install -c checking whether sleep supports fractional seconds... yes checking filesystem timestamp resolution... 0.01 checking whether build environment is sane... yes checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking xargs -n works... yes checking build system type... aarch64-redhat-linux-gnu checking host system type... aarch64-redhat-linux-gnu checking for aarch64-redhat-linux-gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether gcc accepts -g... yes checking for gcc option to enable C11 features... none needed checking whether gcc understands -c and -o together... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of gcc... none checking whether the compiler supports GNU C++... yes checking whether g++ accepts -g... yes checking for g++ option to enable C++11 features... none needed checking dependency style of g++... none checking how to run the C preprocessor... gcc -E checking how to run the C++ preprocessor... g++ -E checking how to print strings... printf checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert aarch64-redhat-linux-gnu file names to aarch64-redhat-linux-gnu format... func_convert_file_noop checking how to convert aarch64-redhat-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for file... file checking for aarch64-redhat-linux-objdump... no checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for aarch64-redhat-linux-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for aarch64-redhat-linux-ranlib... no checking for ranlib... ranlib checking for aarch64-redhat-linux-ar... no checking for ar... ar checking for archiver @FILE support... @ checking for aarch64-redhat-linux-strip... no checking for strip... strip checking command to parse /usr/bin/nm -B output from gcc object... ./configure: line 8283: -e 's/^T .* \(.*\)$/extern int \1();/p' -e 's/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(.*\)$/extern char \1;/p': No such file or directory ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for aarch64-redhat-linux-mt... no checking for mt... no checking if : is a manifest tool... no checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... no checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... no checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for ar... /usr/bin/ar checking for sh... /bin/sh checking whether make sets $(MAKE)... (cached) yes checking for aarch64-redhat-linux-pkg-config... no checking for pkg-config... /usr/bin/pkg-config checking pkg-config is at least version 0.9.0... yes checking whether NLS is requested... yes checking for intltool >= 0.40.0... 0.51.0 found checking for intltool-update... /usr/bin/intltool-update checking for intltool-merge... /usr/bin/intltool-merge checking for intltool-extract... /usr/bin/intltool-extract checking for xgettext... /usr/bin/xgettext checking for msgmerge... /usr/bin/msgmerge checking for msgfmt... /usr/bin/msgfmt checking for gmsgfmt... /usr/bin/msgfmt checking for perl... /usr/bin/perl checking for perl >= 5.8.1... 5.40.0 checking for XML::Parser... ok checking for locale.h... yes checking for LC_MESSAGES... yes checking for CFPreferencesCopyAppValue... no checking for CFLocaleCopyCurrent... no checking for libintl.h... yes checking for ngettext in libc... yes checking for dgettext in libc... yes checking for bind_textdomain_codeset... yes checking for msgfmt... (cached) /usr/bin/msgfmt checking for dcgettext... yes checking if msgfmt accepts -c... yes checking for gmsgfmt... (cached) /usr/bin/msgfmt checking for xgettext... (cached) /usr/bin/xgettext checking whether build environment is sane... yes checking for acos in -lm... yes checking for main in -lflexiblas... yes checking for main in -lflexiblas... (cached) yes checking for sc-config... /usr/bin/sc-config checking SC - version... yes checking for libmopac7 >= 1.13... yes checking for GL/gl.h... yes checking for inline... inline checking for an ANSI C-conforming const... yes checking for egrep... (cached) /usr/bin/grep -E configure: build options: ^^^^^^^^^^^^^^ enable MPQC : yes enable MOPAC7 : yes checking that generated files are newer than configure... done checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating libghemical.pc config.status: creating Makefile config.status: creating bin/Makefile config.status: creating bin/amber/Makefile config.status: creating bin/builder/Makefile config.status: creating bin/param_mm/Makefile config.status: creating bin/param_mm/default/Makefile config.status: creating bin/param_mm/prmfit/Makefile config.status: creating bin/param_mm/tripos52/Makefile config.status: creating bin/param_sf/Makefile config.status: creating bin/param_sf/default/Makefile config.status: creating po/Makefile.in config.status: creating src/Makefile config.status: creating src/libghemicalconfig.h config.status: creating src/libghemical-features.h config.status: executing src/libghemicalconfig2.h commands config.status: executing depfiles commands config.status: executing libtool commands config.status: executing default-1 commands config.status: executing stamp.h commands config.status: executing po/stamp-it commands + /usr/bin/make -O -j4 V=1 VERBOSE=1 Making all in src /usr/bin/make all-am make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o constraint.lo constraint.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c constraint.cpp -fPIC -DPIC -o .libs/constraint.o make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o atom.lo atom.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c atom.cpp -fPIC -DPIC -o .libs/atom.o atom.cpp:33:44: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] 33 | element element::current_element = element("C"); | ^~~ make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o bond.lo bond.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c bond.cpp -fPIC -DPIC -o .libs/bond.o make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o utility.lo utility.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c utility.cpp -fPIC -DPIC -o .libs/utility.o make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' utility.cpp: In function 'void DefineSecondaryStructure(model*)': utility.cpp:308:42: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 308 | i32s tmp1[2] = { n1, n2 }; | ^~ utility.cpp:309:42: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 309 | i32s tmp2[2] = { n1, n2 + 4 }; | ^~ utility.cpp:349:49: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 349 | i32s t1a[2] = { n1, n2 - 1 }; i32s t1b[2] = { n1, n3 }; | ^~ utility.cpp:349:79: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 349 | i32s t1a[2] = { n1, n2 - 1 }; i32s t1b[2] = { n1, n3 }; | ^~ utility.cpp:352:49: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 352 | i32s t2a[2] = { n1, n3 }; i32s t2b[2] = { n1, n2 + 1 }; | ^~ utility.cpp:352:75: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 352 | i32s t2a[2] = { n1, n3 }; i32s t2b[2] = { n1, n2 + 1 }; | ^~ utility.cpp:355:49: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 355 | i32s t3a[2] = { n1, n3 - 1 }; i32s t3b[2] = { n1, n2 }; | ^~ utility.cpp:355:79: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 355 | i32s t3a[2] = { n1, n3 - 1 }; i32s t3b[2] = { n1, n2 }; | ^~ utility.cpp:358:49: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 358 | i32s t4a[2] = { n1, n2 }; i32s t4b[2] = { n1, n3 + 1 }; | ^~ utility.cpp:358:75: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 358 | i32s t4a[2] = { n1, n2 }; i32s t4b[2] = { n1, n3 + 1 }; | ^~ utility.cpp:361:49: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 361 | i32s t5a[2] = { n1, n2 }; i32s t5b[2] = { n1, n3 }; | ^~ utility.cpp:361:75: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 361 | i32s t5a[2] = { n1, n2 }; i32s t5b[2] = { n1, n3 }; | ^~ utility.cpp:364:49: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 364 | i32s t6a[2] = { n1, n3 }; i32s t6b[2] = { n1, n2 }; | ^~ utility.cpp:364:75: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 364 | i32s t6a[2] = { n1, n3 }; i32s t6b[2] = { n1, n2 }; | ^~ utility.cpp:367:49: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 367 | i32s t7a[2] = { n1, n2 - 1 }; i32s t7b[2] = { n1, n3 + 1 }; | ^~ utility.cpp:367:79: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 367 | i32s t7a[2] = { n1, n2 - 1 }; i32s t7b[2] = { n1, n3 + 1 }; | ^~ utility.cpp:370:49: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 370 | i32s t8a[2] = { n1, n3 - 1 }; i32s t8b[2] = { n1, n2 + 1 }; | ^~ utility.cpp:370:79: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 370 | i32s t8a[2] = { n1, n3 - 1 }; i32s t8b[2] = { n1, n2 + 1 }; | ^~ make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o typerule.lo typerule.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c typerule.cpp -fPIC -DPIC -o .libs/typerule.o make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' typerule.cpp: In member function 'i32s typerule::ReadSubRule(std::istream*, std::ostream*)': typerule.cpp:172:56: warning: narrowing conversion of 'strlen(((const char*)((char*)(&((typerule*)this)->typerule::buffer))))' from 'size_t' {aka 'long unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 172 | i32s tmp1[2] = { strlen(buffer), 0 }; | ~~~~~~^~~~~~~~ typerule.cpp:193:49: warning: this 'else' clause does not guard... [-Wmisleading-indentation] 193 | else tmp2[1] = buffer[tmp1[0]++]; element el = element(tmp2); | ^~~~ typerule.cpp:193:83: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'else' 193 | else tmp2[1] = buffer[tmp1[0]++]; element el = element(tmp2); | ^~~~~~~ typerule.cpp: In member function 'bool typerule::CheckRules(model*, atom*, i32s, i32s)': typerule.cpp:302:45: warning: comparison of integer expressions of different signedness: 'int' and 'i32u' {aka 'unsigned int'} [-Wsign-compare] 302 | if (atom->GetConnRecCount() != (i32u) sr_vector[rule].data) return false; | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ typerule.cpp: In member function 'typerule::ReadSubRule(std::basic_istream >*, std::basic_ostream >*)': typerule.cpp:183:50: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 183 | newring[tmp1[1]] = 0; | ~~~~~~~~~~~~~~~~~^~~ typerule.cpp:182:84: note: at offset -1 into destination object of size 0 allocated by 'operator new[](unsigned long)' 182 | signed char * newring = new signed char[tmp1[1] + 1]; | ^ make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o engine.lo engine.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c engine.cpp -fPIC -DPIC -o .libs/engine.o In file included from engine.cpp:22: In member function 'engine::GetSetup()', inlined from 'engine_bp::engine_bp(setup*, unsigned int)' at engine.cpp:765:31: engine.h:244:41: warning: 'MEM[(struct engine *)this_5(D) + 64B].stp' is used uninitialized [-Wuninitialized] 244 | setup * GetSetup(void) { return stp; } | ^~~ In member function 'engine::GetSetup()', inlined from 'engine_pbc::engine_pbc(setup*, unsigned int)' at engine.cpp:783:34: engine.h:244:41: warning: 'MEM[(struct engine *)this_37(D) + 48B].stp' is used uninitialized [-Wuninitialized] 244 | setup * GetSetup(void) { return stp; } | ^~~ make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o chn_info.lo chn_info.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c chn_info.cpp -fPIC -DPIC -o .libs/chn_info.o make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o eng1_qm.lo eng1_qm.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c eng1_qm.cpp -fPIC -DPIC -o .libs/eng1_qm.o make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' In file included from local_i18n.h:38, from eng1_qm.cpp:27: libghemicalconfig.h:99:9: warning: 'PACKAGE_NAME' redefined 99 | #define PACKAGE_NAME "libghemical" | ^~~~~~~~~~~~ In file included from /usr/include/mpqc/util/misc/exenv.h:37, from /usr/include/mpqc/util/class/class.h:46, from /usr/include/mpqc/util/keyval/keyval.h:42, from eng1_qm_mpqc.h:37, from eng1_qm.cpp:24: /usr/include/mpqc/scconfig.h:278:9: note: this is the location of the previous definition 278 | #define PACKAGE_NAME "" | ^~~~~~~~~~~~ libghemicalconfig.h:102:9: warning: 'PACKAGE_STRING' redefined 102 | #define PACKAGE_STRING "libghemical 3.0.0" | ^~~~~~~~~~~~~~ /usr/include/mpqc/scconfig.h:281:9: note: this is the location of the previous definition 281 | #define PACKAGE_STRING "" | ^~~~~~~~~~~~~~ libghemicalconfig.h:105:9: warning: 'PACKAGE_TARNAME' redefined 105 | #define PACKAGE_TARNAME "libghemical" | ^~~~~~~~~~~~~~~ /usr/include/mpqc/scconfig.h:284:9: note: this is the location of the previous definition 284 | #define PACKAGE_TARNAME "" | ^~~~~~~~~~~~~~~ libghemicalconfig.h:111:9: warning: 'PACKAGE_VERSION' redefined 111 | #define PACKAGE_VERSION "3.0.0" | ^~~~~~~~~~~~~~~ /usr/include/mpqc/scconfig.h:290:9: note: this is the location of the previous definition 290 | #define PACKAGE_VERSION "" | ^~~~~~~~~~~~~~~ In file included from eng1_qm.cpp:22: eng1_qm.h: In member function 'virtual bool eng1_qm::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng1_qm.h:128:155: warning: no return statement in function returning non-void [-Wreturn-type] 128 | virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng1_qm.h: In member function 'virtual bool eng1_qm::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng1_qm.h:129:142: warning: no return statement in function returning non-void [-Wreturn-type] 129 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ In file included from eng1_qm.h:34: In member function 'engine::GetSetup()', inlined from 'eng1_qm::eng1_qm(setup*, unsigned int)' at eng1_qm.cpp:249:46: engine.h:244:41: warning: 'MEM[(struct engine *)this_19(D) + 40B].stp' is used uninitialized [-Wuninitialized] 244 | setup * GetSetup(void) { return stp; } | ^~~ make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o mfinder.lo mfinder.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c mfinder.cpp -fPIC -DPIC -o .libs/mfinder.o mfinder.cpp: In member function 'void mfinder::Identify(model*)': mfinder.cpp:164:41: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 164 | if (!flag) continue; head_atoms.push_back(& (* it1)); break; | ^~ mfinder.cpp:164:62: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 164 | if (!flag) continue; head_atoms.push_back(& (* it1)); break; | ^~~~~~~~~~ mfinder.cpp:173:41: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 173 | if (!flag) continue; tail_atoms.push_back(& (* it1)); break; | ^~ mfinder.cpp:173:62: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 173 | if (!flag) continue; tail_atoms.push_back(& (* it1)); break; | ^~~~~~~~~~ mfinder.cpp:221:37: warning: unused variable 'head_el' [-Wunused-variable] 221 | int head_el = NOT_DEFINED; | ^~~~~~~ mfinder.cpp:222:37: warning: unused variable 'tail_el' [-Wunused-variable] 222 | int tail_el = NOT_DEFINED; | ^~~~~~~ mfinder.cpp: In function 'std::ostream& operator<<(std::ostream&, mf_data_atm&)': mfinder.cpp:703:9: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 703 | if (p2.tr != NULL) p1 << " " << (* p2.tr); p1 << " "; | ^~ mfinder.cpp:703:52: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 703 | if (p2.tr != NULL) p1 << " " << (* p2.tr); p1 << " "; | ^~ make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o eng1_qm_mopac.lo eng1_qm_mopac.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c eng1_qm_mopac.cpp -fPIC -DPIC -o .libs/eng1_qm_mopac.o In file included from eng1_qm_mopac.h:30, from eng1_qm_mopac.cpp:22: eng1_qm.h: In member function 'virtual bool eng1_qm::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng1_qm.h:128:155: warning: no return statement in function returning non-void [-Wreturn-type] 128 | virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng1_qm.h: In member function 'virtual bool eng1_qm::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng1_qm.h:129:142: warning: no return statement in function returning non-void [-Wreturn-type] 129 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng1_qm_mopac.cpp: In destructor 'eng1_qm_mopac::~eng1_qm_mopac()': eng1_qm_mopac.cpp:153:15: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 153 | system(cs_FOR005.str().c_str()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ eng1_qm_mopac.cpp:157:15: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 157 | system(cs_SHUTDOWN.str().c_str()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ eng1_qm_mopac.cpp: In destructor 'virtual eng1_qm_mopac::~eng1_qm_mopac()': eng1_qm_mopac.cpp:153:15: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 153 | system(cs_FOR005.str().c_str()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ eng1_qm_mopac.cpp:157:15: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 157 | system(cs_SHUTDOWN.str().c_str()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ eng1_qm_mopac.cpp: In member function 'void eng1_qm_mopac::FixMeLaterTSS()': eng1_qm_mopac.cpp:178:15: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 178 | system(cs_FOR005.str().c_str()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ eng1_qm_mopac.cpp:181:15: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 181 | system(cs_SHUTDOWN.str().c_str()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o eng1_qm_mpqc.lo eng1_qm_mpqc.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c eng1_qm_mpqc.cpp -fPIC -DPIC -o .libs/eng1_qm_mpqc.o In file included from local_i18n.h:38, from eng1_qm_mpqc.cpp:24: libghemicalconfig.h:99:9: warning: 'PACKAGE_NAME' redefined 99 | #define PACKAGE_NAME "libghemical" | ^~~~~~~~~~~~ In file included from /usr/include/mpqc/util/misc/exenv.h:37, from /usr/include/mpqc/util/class/class.h:46, from /usr/include/mpqc/util/keyval/keyval.h:42, from eng1_qm_mpqc.h:37, from eng1_qm_mpqc.cpp:22: /usr/include/mpqc/scconfig.h:278:9: note: this is the location of the previous definition 278 | #define PACKAGE_NAME "" | ^~~~~~~~~~~~ libghemicalconfig.h:102:9: warning: 'PACKAGE_STRING' redefined 102 | #define PACKAGE_STRING "libghemical 3.0.0" | ^~~~~~~~~~~~~~ /usr/include/mpqc/scconfig.h:281:9: note: this is the location of the previous definition 281 | #define PACKAGE_STRING "" | ^~~~~~~~~~~~~~ libghemicalconfig.h:105:9: warning: 'PACKAGE_TARNAME' redefined 105 | #define PACKAGE_TARNAME "libghemical" | ^~~~~~~~~~~~~~~ /usr/include/mpqc/scconfig.h:284:9: note: this is the location of the previous definition 284 | #define PACKAGE_TARNAME "" | ^~~~~~~~~~~~~~~ libghemicalconfig.h:111:9: warning: 'PACKAGE_VERSION' redefined 111 | #define PACKAGE_VERSION "3.0.0" | ^~~~~~~~~~~~~~~ /usr/include/mpqc/scconfig.h:290:9: note: this is the location of the previous definition 290 | #define PACKAGE_VERSION "" | ^~~~~~~~~~~~~~~ In file included from /usr/include/mpqc/util/group/linkage.h:32, from /usr/include/mpqc/math/scmat/linkage.h:34, from /usr/include/mpqc/chemistry/qc/scf/linkage.h:37, from eng1_qm_mpqc.cpp:44: /usr/include/mpqc/scconfig.h:278:9: warning: 'PACKAGE_NAME' redefined 278 | #define PACKAGE_NAME "" | ^~~~~~~~~~~~ libghemicalconfig.h:99:9: note: this is the location of the previous definition 99 | #define PACKAGE_NAME "libghemical" | ^~~~~~~~~~~~ /usr/include/mpqc/scconfig.h:281:9: warning: 'PACKAGE_STRING' redefined 281 | #define PACKAGE_STRING "" | ^~~~~~~~~~~~~~ libghemicalconfig.h:102:9: note: this is the location of the previous definition 102 | #define PACKAGE_STRING "libghemical 3.0.0" | ^~~~~~~~~~~~~~ /usr/include/mpqc/scconfig.h:284:9: warning: 'PACKAGE_TARNAME' redefined 284 | #define PACKAGE_TARNAME "" | ^~~~~~~~~~~~~~~ libghemicalconfig.h:105:9: note: this is the location of the previous definition 105 | #define PACKAGE_TARNAME "libghemical" | ^~~~~~~~~~~~~~~ /usr/include/mpqc/scconfig.h:290:9: warning: 'PACKAGE_VERSION' redefined 290 | #define PACKAGE_VERSION "" | ^~~~~~~~~~~~~~~ libghemicalconfig.h:111:9: note: this is the location of the previous definition 111 | #define PACKAGE_VERSION "3.0.0" | ^~~~~~~~~~~~~~~ In file included from eng1_qm_mpqc.h:32: eng1_qm.h: In member function 'virtual bool eng1_qm::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng1_qm.h:128:155: warning: no return statement in function returning non-void [-Wreturn-type] 128 | virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng1_qm.h: In member function 'virtual bool eng1_qm::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng1_qm.h:129:142: warning: no return statement in function returning non-void [-Wreturn-type] 129 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ In file included from /usr/include/mpqc/math/optimize/qnewton.h:39, from /usr/include/mpqc/math/optimize/linkage.h:31, from /usr/include/mpqc/chemistry/molecule/linkage.h:40, from /usr/include/mpqc/chemistry/qc/scf/linkage.h:38: /usr/include/mpqc/math/optimize/opt.h: At global scope: /usr/include/mpqc/math/optimize/opt.h:106:18: warning: 'virtual void sc::Optimize::init()' was hidden [-Woverloaded-virtual=] 106 | virtual void init(); | ^~~~ /usr/include/mpqc/math/optimize/opt.h:152:18: note: by 'sc::LineOpt::init' 152 | virtual void init(RefSCVector& direction, Ref function); | ^~~~ eng1_qm_mpqc.cpp: In constructor 'eng1_qm_mpqc::eng1_qm_mpqc(setup*, i32u, i32u)': eng1_qm_mpqc.cpp:50:92: warning: base 'eng1_qm' will be initialized after [-Wreorder] 50 | eng1_qm_mpqc::eng1_qm_mpqc(setup * p1, i32u p2, i32u mode) : eng1_qm(p1, p2), engine(p1, p2) | ^ eng1_qm_mpqc.cpp:50:92: warning: base 'engine' [-Wreorder] eng1_qm_mpqc.cpp:50:1: warning: when initialized here [-Wreorder] 50 | eng1_qm_mpqc::eng1_qm_mpqc(setup * p1, i32u p2, i32u mode) : eng1_qm(p1, p2), engine(p1, p2) | ^~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o seqbuild.lo seqbuild.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c seqbuild.cpp -fPIC -DPIC -o .libs/seqbuild.o make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' seqbuild.cpp: In member function 'void sequencebuilder::Build(model*, sb_chain_descriptor*, bool)': seqbuild.cpp:307:29: warning: comparison of integer expressions of different signedness: 'i32u' {aka 'unsigned int'} and 'const int' [-Wsign-compare] 307 | for (i32u n1 = 0;n1 < num_res;n1++) | ~~~^~~~~~~~~ seqbuild.cpp:310:37: warning: comparison of integer expressions of different signedness: 'i32u' {aka 'unsigned int'} and 'int' [-Wsign-compare] 310 | bool last_res = (n1 == (num_res - 1)); | ~~~^~~~~~~~~~~~~~~~ seqbuild.cpp:317:74: warning: comparison of integer expressions of different signedness: 'int' and 'i32u' {aka 'unsigned int'} [-Wsign-compare] 317 | if (chde->c_crd_BGN < 0 && chde->c_crd_v[n2].pos == n1) chde->c_crd_BGN = n2; seqbuild.cpp:318:98: warning: comparison of integer expressions of different signedness: 'int' and 'i32u' {aka 'unsigned int'} [-Wsign-compare] 318 | if (chde->c_crd_BGN >= 0 && chde->c_crd_END < 0 && chde->c_crd_v[n2].pos > n1) chde->c_crd_END = n2; seqbuild.cpp:324:74: warning: comparison of integer expressions of different signedness: 'int' and 'i32u' {aka 'unsigned int'} [-Wsign-compare] 324 | if (chde->c_tor_BGN < 0 && chde->c_tor_v[n2].pos == n1) chde->c_tor_BGN = n2; seqbuild.cpp:325:98: warning: comparison of integer expressions of different signedness: 'int' and 'i32u' {aka 'unsigned int'} [-Wsign-compare] 325 | if (chde->c_tor_BGN >= 0 && chde->c_tor_END < 0 && chde->c_tor_v[n2].pos > n1) chde->c_tor_END = n2; seqbuild.cpp: In member function 'void sequencebuilder::Identify(model*)': seqbuild.cpp:541:41: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 541 | if (!flag) continue; head_atoms.push_back(& (* it1)); break; | ^~ seqbuild.cpp:541:62: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 541 | if (!flag) continue; head_atoms.push_back(& (* it1)); break; | ^~~~~~~~~~ seqbuild.cpp:550:41: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 550 | if (!flag) continue; tail_atoms.push_back(& (* it1)); break; | ^~ seqbuild.cpp:550:62: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 550 | if (!flag) continue; tail_atoms.push_back(& (* it1)); break; | ^~~~~~~~~~ seqbuild.cpp: In member function 'void sequencebuilder::Convert(sb_chain_descriptor*, sb_data_atm*, fGL*)': seqbuild.cpp:1124:27: warning: comparison of integer expressions of different signedness: 'const int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 1124 | if (tor_i >= td_v.size()) | ~~~~~~^~~~~~~~~~~~~~ seqbuild.cpp:1298:35: warning: comparison of integer expressions of different signedness: 'const int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 1298 | if (tor_i >= chde->def_tor.size()) | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ seqbuild.cpp:1328:40: warning: comparison of integer expressions of different signedness: 'const int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 1328 | else if (tor_i < chde->def_tor.size()) | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~ seqbuild.cpp: In function 'std::istream& operator>>(std::istream&, sb_data_td&)': seqbuild.cpp:1577:14: warning: unused variable 'buffer' [-Wunused-variable] 1577 | char buffer[256]; | ^~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o eng1_mm.lo eng1_mm.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c eng1_mm.cpp -fPIC -DPIC -o .libs/eng1_mm.o make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' In file included from eng1_mm.h:39, from eng1_mm.cpp:22: In member function 'engine::GetSetup()', inlined from 'eng1_mm::eng1_mm(setup*, unsigned int)' at eng1_mm.cpp:206:46: engine.h:244:41: warning: 'MEM[(struct engine *)this_56(D) + 176B].stp' is used uninitialized [-Wuninitialized] 244 | setup * GetSetup(void) { return stp; } | ^~~ make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o model.lo model.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c model.cpp -fPIC -DPIC -o .libs/model.o In file included from local_i18n.h:38, from model.cpp:46: libghemicalconfig.h:99:9: warning: 'PACKAGE_NAME' redefined 99 | #define PACKAGE_NAME "libghemical" | ^~~~~~~~~~~~ In file included from /usr/include/mpqc/util/misc/exenv.h:37, from /usr/include/mpqc/util/class/class.h:46, from /usr/include/mpqc/util/keyval/keyval.h:42, from eng1_qm_mpqc.h:37, from eng2_qm_mm.h:38, from model.cpp:35: /usr/include/mpqc/scconfig.h:278:9: note: this is the location of the previous definition 278 | #define PACKAGE_NAME "" | ^~~~~~~~~~~~ libghemicalconfig.h:102:9: warning: 'PACKAGE_STRING' redefined 102 | #define PACKAGE_STRING "libghemical 3.0.0" | ^~~~~~~~~~~~~~ /usr/include/mpqc/scconfig.h:281:9: note: this is the location of the previous definition 281 | #define PACKAGE_STRING "" | ^~~~~~~~~~~~~~ libghemicalconfig.h:105:9: warning: 'PACKAGE_TARNAME' redefined 105 | #define PACKAGE_TARNAME "libghemical" | ^~~~~~~~~~~~~~~ /usr/include/mpqc/scconfig.h:284:9: note: this is the location of the previous definition 284 | #define PACKAGE_TARNAME "" | ^~~~~~~~~~~~~~~ libghemicalconfig.h:111:9: warning: 'PACKAGE_VERSION' redefined 111 | #define PACKAGE_VERSION "3.0.0" | ^~~~~~~~~~~~~~~ /usr/include/mpqc/scconfig.h:290:9: note: this is the location of the previous definition 290 | #define PACKAGE_VERSION "" | ^~~~~~~~~~~~~~~ In file included from model.cpp:31: eng1_qm.h: In member function 'virtual bool eng1_qm::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng1_qm.h:128:155: warning: no return statement in function returning non-void [-Wreturn-type] 128 | virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng1_qm.h: In member function 'virtual bool eng1_qm::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng1_qm.h:129:142: warning: no return statement in function returning non-void [-Wreturn-type] 129 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng2_qm_mm.h: In member function 'virtual bool eng2_qm_mm_mopac::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng2_qm_mm.h:90:155: warning: no return statement in function returning non-void [-Wreturn-type] 90 | virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng2_qm_mm.h: In member function 'virtual bool eng2_qm_mm_mopac::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng2_qm_mm.h:91:142: warning: no return statement in function returning non-void [-Wreturn-type] 91 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng2_qm_mm.h: In member function 'virtual bool eng2_qm_mm_mpqc::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng2_qm_mm.h:127:155: warning: no return statement in function returning non-void [-Wreturn-type] 127 | virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng2_qm_mm.h: In member function 'virtual bool eng2_qm_mm_mpqc::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng2_qm_mm.h:128:142: warning: no return statement in function returning non-void [-Wreturn-type] 128 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ model.cpp: In member function 'bool model::FindRing(atom*, atom*, signed char*, i32s, i32s, i32s)': model.cpp:961:9: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 961 | if (dist == size) return false; iter_cl it1; | ^~ model.cpp:961:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 961 | if (dist == size) return false; iter_cl it1; | ^~~~~~~ model.cpp: In member function 'void model::AddHydrogens()': model.cpp:1755:45: warning: suggest parentheses around operand of '!' or change '&' to '&&' or '!' to '~' [-Wparentheses] 1755 | if (some_atoms_selected && (!(* it1).flags & ATOMFLAG_USER_SELECTED)) | ^~~~~~~~~~~~~~ model.cpp: In member function 'void model::SolvateBox(fGL, fGL, fGL, fGL, model*, const char*)': model.cpp:2248:52: warning: variable 'r1' set but not used [-Wunused-but-set-variable] 2248 | const default_at * at; f64 r1 = 0.150; f64 e1 = 0.175; | ^~ model.cpp:2248:68: warning: variable 'e1' set but not used [-Wunused-but-set-variable] 2248 | const default_at * at; f64 r1 = 0.150; f64 e1 = 0.175; | ^~ model.cpp: In member function 'void model::DoGeomOpt(geomopt_param&, bool)': model.cpp:2663:21: warning: unused variable 'eng_bp' [-Wunused-variable] 2663 | engine_bp * eng_bp = dynamic_cast(eng); | ^~~~~~ model.cpp: In member function 'bool model::GetCRDSetVisible(i32u)': model.cpp:319:30: warning: control reaches end of non-void function [-Wreturn-type] 319 | else assertion_failed(__FILE__, __LINE__, "index overflow"); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o tab_mm_tripos52.lo tab_mm_tripos52.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c tab_mm_tripos52.cpp -fPIC -DPIC -o .libs/tab_mm_tripos52.o make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o eng1_mm_tripos52.lo eng1_mm_tripos52.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c eng1_mm_tripos52.cpp -fPIC -DPIC -o .libs/eng1_mm_tripos52.o In file included from eng1_mm.h:39, from eng1_mm_tripos52.h:39, from eng1_mm_tripos52.cpp:22: In member function 'engine::GetSetup()', inlined from 'eng1_mm_tripos52_nbt_bp::eng1_mm_tripos52_nbt_bp(setup*, unsigned int)' at eng1_mm_tripos52.cpp:833:36: engine.h:244:41: warning: 'MEM[(struct engine *)this_65(D) + 208B].stp' is used uninitialized [-Wuninitialized] 244 | setup * GetSetup(void) { return stp; } | ^~~ make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o eng1_mm_default.lo eng1_mm_default.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c eng1_mm_default.cpp -fPIC -DPIC -o .libs/eng1_mm_default.o In file included from eng1_mm.h:39, from eng1_mm_default.h:40, from eng1_mm_default.cpp:22: In member function 'engine::GetSetup()', inlined from 'eng1_mm_default_nbt_bp::eng1_mm_default_nbt_bp(setup*, unsigned int)' at eng1_mm_default.cpp:1112:41: engine.h:244:41: warning: 'MEM[(struct engine *)this_86(D) + 208B].stp' is used uninitialized [-Wuninitialized] 244 | setup * GetSetup(void) { return stp; } | ^~~ In member function 'engine::GetSetup()', inlined from 'eng1_mm_default_bt::eng1_mm_default_bt(setup*, unsigned int)' at eng1_mm_default.cpp:42:45: engine.h:244:41: warning: 'MEM[(struct engine *)this_490(D) + 296B].stp' is used uninitialized [-Wuninitialized] 244 | setup * GetSetup(void) { return stp; } | ^~~ make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o tab_mm_prmfit.lo tab_mm_prmfit.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c tab_mm_prmfit.cpp -fPIC -DPIC -o .libs/tab_mm_prmfit.o make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' tab_mm_prmfit.cpp:597:17: warning: multi-line comment [-Wcomment] 597 | // / \ | ^ make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o eng1_sf_ua.lo eng1_sf_ua.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c eng1_sf_ua.cpp -fPIC -DPIC -o .libs/eng1_sf_ua.o make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o eng1_sf_cg.lo eng1_sf_cg.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c eng1_sf_cg.cpp -fPIC -DPIC -o .libs/eng1_sf_cg.o make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o tab_mm_default.lo tab_mm_default.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c tab_mm_default.cpp -fPIC -DPIC -o .libs/tab_mm_default.o tab_mm_default.cpp:691:17: warning: multi-line comment [-Wcomment] 691 | // / \ | ^ tab_mm_default.cpp: In member function 'bool default_tables::e_Init(eng1_mm*, mm_default_bt3*, i32s*)': tab_mm_default.cpp:3178:17: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 3178 | if (z < 1) z = 1; z -= 1; | ^~ tab_mm_default.cpp:3178:35: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 3178 | if (z < 1) z = 1; z -= 1; | ^ make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o eng1_mm_prmfit.lo eng1_mm_prmfit.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c eng1_mm_prmfit.cpp -fPIC -DPIC -o .libs/eng1_mm_prmfit.o make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' eng1_mm_prmfit.cpp: In constructor 'eng1_mm_prmfit::eng1_mm_prmfit(setup*, i32u, prmfit_tables&)': eng1_mm_prmfit.cpp:329:9: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 329 | if (query.index == NOT_DEFINED) bt3_err++; | ^~ eng1_mm_prmfit.cpp:331:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 331 | newbt3.fc1 = query.fc1; | ^~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o notice.lo notice.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c notice.cpp -fPIC -DPIC -o .libs/notice.o make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o conjgrad.lo conjgrad.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c conjgrad.cpp -fPIC -DPIC -o .libs/conjgrad.o make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o eng2_qm_mm.lo eng2_qm_mm.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c eng2_qm_mm.cpp -fPIC -DPIC -o .libs/eng2_qm_mm.o In file included from local_i18n.h:38, from eng2_qm_mm.cpp:24: libghemicalconfig.h:99:9: warning: 'PACKAGE_NAME' redefined 99 | #define PACKAGE_NAME "libghemical" | ^~~~~~~~~~~~ In file included from /usr/include/mpqc/util/misc/exenv.h:37, from /usr/include/mpqc/util/class/class.h:46, from /usr/include/mpqc/util/keyval/keyval.h:42, from eng1_qm_mpqc.h:37, from eng2_qm_mm.h:38, from eng2_qm_mm.cpp:22: /usr/include/mpqc/scconfig.h:278:9: note: this is the location of the previous definition 278 | #define PACKAGE_NAME "" | ^~~~~~~~~~~~ libghemicalconfig.h:102:9: warning: 'PACKAGE_STRING' redefined 102 | #define PACKAGE_STRING "libghemical 3.0.0" | ^~~~~~~~~~~~~~ /usr/include/mpqc/scconfig.h:281:9: note: this is the location of the previous definition 281 | #define PACKAGE_STRING "" | ^~~~~~~~~~~~~~ libghemicalconfig.h:105:9: warning: 'PACKAGE_TARNAME' redefined 105 | #define PACKAGE_TARNAME "libghemical" | ^~~~~~~~~~~~~~~ /usr/include/mpqc/scconfig.h:284:9: note: this is the location of the previous definition 284 | #define PACKAGE_TARNAME "" | ^~~~~~~~~~~~~~~ libghemicalconfig.h:111:9: warning: 'PACKAGE_VERSION' redefined 111 | #define PACKAGE_VERSION "3.0.0" | ^~~~~~~~~~~~~~~ /usr/include/mpqc/scconfig.h:290:9: note: this is the location of the previous definition 290 | #define PACKAGE_VERSION "" | ^~~~~~~~~~~~~~~ In file included from eng2_qm_mm.h:28: eng1_qm.h: In member function 'virtual bool eng1_qm::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng1_qm.h:128:155: warning: no return statement in function returning non-void [-Wreturn-type] 128 | virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng1_qm.h: In member function 'virtual bool eng1_qm::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng1_qm.h:129:142: warning: no return statement in function returning non-void [-Wreturn-type] 129 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng2_qm_mm.h: In member function 'virtual bool eng2_qm_mm_mopac::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng2_qm_mm.h:90:155: warning: no return statement in function returning non-void [-Wreturn-type] 90 | virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng2_qm_mm.h: In member function 'virtual bool eng2_qm_mm_mopac::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng2_qm_mm.h:91:142: warning: no return statement in function returning non-void [-Wreturn-type] 91 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng2_qm_mm.h: In member function 'virtual bool eng2_qm_mm_mpqc::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng2_qm_mm.h:127:155: warning: no return statement in function returning non-void [-Wreturn-type] 127 | virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng2_qm_mm.h: In member function 'virtual bool eng2_qm_mm_mpqc::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng2_qm_mm.h:128:142: warning: no return statement in function returning non-void [-Wreturn-type] 128 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o intcrd.lo intcrd.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c intcrd.cpp -fPIC -DPIC -o .libs/intcrd.o make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' intcrd.cpp: In constructor 'intcrd::intcrd(model&, i32s, i32s)': intcrd.cpp:82:47: warning: comparison of integer expressions of different signedness: 'int' and 'i32u' {aka 'unsigned int'} [-Wsign-compare] 82 | if ((* it1).GetConnRecCount() < nbonds) | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o geomopt.lo geomopt.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c geomopt.cpp -fPIC -DPIC -o .libs/geomopt.o In file included from geomopt.h:31, from geomopt.cpp:22: eng1_qm.h: In member function 'virtual bool eng1_qm::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng1_qm.h:128:155: warning: no return statement in function returning non-void [-Wreturn-type] 128 | virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng1_qm.h: In member function 'virtual bool eng1_qm::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng1_qm.h:129:142: warning: no return statement in function returning non-void [-Wreturn-type] 129 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o moldyn.lo moldyn.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c moldyn.cpp -fPIC -DPIC -o .libs/moldyn.o make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' moldyn.cpp: In member function 'virtual void moldyn::TakeMDStep(bool, bool)': moldyn.cpp:149:13: warning: variable 'current_temperature' set but not used [-Wunused-but-set-variable] 149 | f64 current_temperature = ConvEKinTemp(ekin); | ^~~~~~~~~~~~~~~~~~~ moldyn.cpp:242:55: warning: 'volume' may be used uninitialized [-Wmaybe-uninitialized] 242 | saved_density = 0.001 * sum_of_masses / volume; // kg/dm^3 | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~ moldyn.cpp:188:21: note: 'volume' was declared here 188 | f64 volume; | ^~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o pop_ana.lo pop_ana.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c pop_ana.cpp -fPIC -DPIC -o .libs/pop_ana.o In file included from pop_ana.h:31, from pop_ana.cpp:22: eng1_qm.h: In member function 'virtual bool eng1_qm::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng1_qm.h:128:155: warning: no return statement in function returning non-void [-Wreturn-type] 128 | virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng1_qm.h: In member function 'virtual bool eng1_qm::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng1_qm.h:129:142: warning: no return statement in function returning non-void [-Wreturn-type] 129 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o search.lo search.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c search.cpp -fPIC -DPIC -o .libs/search.o make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' In file included from search.h:35, from search.cpp:22: eng1_qm.h: In member function 'virtual bool eng1_qm::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng1_qm.h:128:155: warning: no return statement in function returning non-void [-Wreturn-type] 128 | virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng1_qm.h: In member function 'virtual bool eng1_qm::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng1_qm.h:129:142: warning: no return statement in function returning non-void [-Wreturn-type] 129 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ search.cpp: In constructor 'transition_state_search::transition_state_search(model*, f64, f64)': search.cpp:513:29: warning: comparison of integer expressions of different signedness: 'i32s' {aka 'int'} and 'i32u' {aka 'unsigned int'} [-Wsign-compare] 513 | for (i32s n1 = 0;n1 < mdl->GetCRDSetCount();n1++) | ~~~^~~~~~~~~~~~~~~~~~~~~~~ search.cpp:795:39: warning: comparison of integer expressions of different signedness: 'i32u' {aka 'unsigned int'} and 'int' [-Wsign-compare] 795 | if (engQM->l2g_qm[ii] != ii) problems = true; | ~~~~~~~~~~~~~~~~~~^~~~~ make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o resonance.lo resonance.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c resonance.cpp -fPIC -DPIC -o .libs/resonance.o make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o sasaeval.lo sasaeval.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c sasaeval.cpp -fPIC -DPIC -o .libs/sasaeval.o make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' sasaeval.cpp: In constructor 'sasaeval::sasaeval(engine*)': sasaeval.cpp:59:27: warning: comparison of integer expressions of different signedness: 'i32u' {aka 'unsigned int'} and 'i32s' {aka 'int'} [-Wsign-compare] 59 | for (i32u i = 0;i < natm_GLOB;i++) | ~~^~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o eng1_sf.lo eng1_sf.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c eng1_sf.cpp -fPIC -DPIC -o .libs/eng1_sf.o make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' eng1_sf.cpp: In member function 'void setup1_sf::StorePStatesToModel(eng1_sf*)': eng1_sf.cpp:965:33: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 965 | if (tmpc < -0.5) charge -= 1; if (tmpc > +0.5) charge += 1; | ^~ eng1_sf.cpp:965:63: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 965 | if (tmpc < -0.5) charge -= 1; if (tmpc > +0.5) charge += 1; | ^~ eng1_sf.cpp: In constructor 'eng1_sf::eng1_sf(setup*, i32u, bool, bool)': eng1_sf.cpp:1444:6: warning: variable 'h4flag_0' set but not used [-Wunused-but-set-variable] 1444 | bool h4flag_0 = false; if ((indr1 - 0) >= 0 && mysu->chn_vector[indc1].res_vector[indr1 - 0].state == SF_STATE_HELIX4) h4flag_0 = true; | ^~~~~~~~ eng1_sf.cpp:1447:6: warning: variable 'h4flag_3' set but not used [-Wunused-but-set-variable] 1447 | bool h4flag_3 = false; if ((indr1 - 3) >= 0 && mysu->chn_vector[indc1].res_vector[indr1 - 3].state == SF_STATE_HELIX4) h4flag_3 = true; | ^~~~~~~~ eng1_sf.cpp: In member function 'eng1_sf::ComputeBT3(unsigned int)': eng1_sf.cpp:3463:49: warning: 'cs[0]' may be used uninitialized [-Wmaybe-uninitialized] 3463 | loop1 += fsc[0] * cs[0] + fsc[1] * cs[1] + fsc[2] * cs[2]; | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ eng1_sf.cpp:3350:21: note: 'cs[0]' was declared here 3350 | f64 cs[3]; f64 sn[3]; | ^~ eng1_sf.cpp:3463:58: warning: 'cs[1]' may be used uninitialized [-Wmaybe-uninitialized] 3463 | loop1 += fsc[0] * cs[0] + fsc[1] * cs[1] + fsc[2] * cs[2]; | ~~~~~~~^~~~~~~ eng1_sf.cpp:3350:21: note: 'cs[1]' was declared here 3350 | f64 cs[3]; f64 sn[3]; | ^~ eng1_sf.cpp:3463:66: warning: 'cs[2]' may be used uninitialized [-Wmaybe-uninitialized] 3463 | loop1 += fsc[0] * cs[0] + fsc[1] * cs[1] + fsc[2] * cs[2]; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ eng1_sf.cpp:3350:21: note: 'cs[2]' was declared here 3350 | f64 cs[3]; f64 sn[3]; | ^~ eng1_sf.cpp:3464:49: warning: 'sn[0]' may be used uninitialized [-Wmaybe-uninitialized] 3464 | loop1 += fss[0] * sn[0] + fss[1] * sn[1] + fss[2] * sn[2]; | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ eng1_sf.cpp:3350:32: note: 'sn[0]' was declared here 3350 | f64 cs[3]; f64 sn[3]; | ^~ eng1_sf.cpp:3464:58: warning: 'sn[1]' may be used uninitialized [-Wmaybe-uninitialized] 3464 | loop1 += fss[0] * sn[0] + fss[1] * sn[1] + fss[2] * sn[2]; | ~~~~~~~^~~~~~~ eng1_sf.cpp:3350:32: note: 'sn[1]' was declared here 3350 | f64 cs[3]; f64 sn[3]; | ^~ eng1_sf.cpp:3464:66: warning: 'sn[2]' may be used uninitialized [-Wmaybe-uninitialized] 3464 | loop1 += fss[0] * sn[0] + fss[1] * sn[1] + fss[2] * sn[2]; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ eng1_sf.cpp:3350:32: note: 'sn[2]' was declared here 3350 | f64 cs[3]; f64 sn[3]; | ^~ make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=link g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -version-info 5:1:0 -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o libghemical.la -rpath /usr/lib64 atom.lo bond.lo constraint.lo model.lo engine.lo typerule.lo utility.lo chn_info.lo seqbuild.lo mfinder.lo eng1_qm.lo eng1_qm_mpqc.lo eng1_qm_mopac.lo eng1_mm.lo eng1_mm_tripos52.lo tab_mm_tripos52.lo eng1_mm_default.lo tab_mm_default.lo eng1_mm_prmfit.lo tab_mm_prmfit.lo eng1_sf.lo eng1_sf_ua.lo eng1_sf_cg.lo eng2_qm_mm.lo notice.lo conjgrad.lo intcrd.lo search.lo geomopt.lo moldyn.lo pop_ana.lo sasaeval.lo resonance.lo -lflexiblas -lflexiblas -lm -L/usr/lib64 -lSCoptions -lSCpsi -lSCmbptr12 -lSCmbpt -lSCwfn -lSCsolvent -lSCdft -lSCscf -lSCcints -lSCintv3 -lSCoint3 -lSCbasis -lSCmolecule -lSCisosurf -lSCoptimize -lSCsymmetry -lSCscmat -lSCgroup -lSCrender -lSCmisc -lSCstate -lSCkeyval -lSCclass -lSCcontainer -lSCref -lderiv -lr12 -lint -lm -ldl -lflexiblas -L/lib/../lib64 -L/usr/lib/../lib64 -lflexiblas -lgfortran -lm -L/lib/../lib64 -L/usr/lib/../lib64 -lflexiblas -lgfortran -lm -L/usr/lib -lmopac7 libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/aarch64-redhat-linux/15/../../../../lib64/crti.o /usr/lib/gcc/aarch64-redhat-linux/15/crtbeginS.o .libs/atom.o .libs/bond.o .libs/constraint.o .libs/model.o .libs/engine.o .libs/typerule.o .libs/utility.o .libs/chn_info.o .libs/seqbuild.o .libs/mfinder.o .libs/eng1_qm.o .libs/eng1_qm_mpqc.o .libs/eng1_qm_mopac.o .libs/eng1_mm.o .libs/eng1_mm_tripos52.o .libs/tab_mm_tripos52.o .libs/eng1_mm_default.o .libs/tab_mm_default.o .libs/eng1_mm_prmfit.o .libs/tab_mm_prmfit.o .libs/eng1_sf.o .libs/eng1_sf_ua.o .libs/eng1_sf_cg.o .libs/eng2_qm_mm.o .libs/notice.o .libs/conjgrad.o .libs/intcrd.o .libs/search.o .libs/geomopt.o .libs/moldyn.o .libs/pop_ana.o .libs/sasaeval.o .libs/resonance.o -L/usr/lib64 -lSCoptions -lSCpsi -lSCmbptr12 -lSCmbpt -lSCwfn -lSCsolvent -lSCdft -lSCscf -lSCcints -lSCintv3 -lSCoint3 -lSCbasis -lSCmolecule -lSCisosurf -lSCoptimize -lSCsymmetry -lSCscmat -lSCgroup -lSCrender -lSCmisc -lSCstate -lSCkeyval -lSCclass -lSCcontainer -lSCref -lderiv -lr12 -lint -ldl -L/lib/../lib64 -L/usr/lib/../lib64 -lflexiblas -lgfortran -L/usr/lib -lmopac7 -L/usr/lib/gcc/aarch64-redhat-linux/15 -L/usr/lib/gcc/aarch64-redhat-linux/15/../../../../lib64 -L/usr/lib/gcc/aarch64-redhat-linux/15/../../.. -L/lib -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/aarch64-redhat-linux/15/crtendS.o /usr/lib/gcc/aarch64-redhat-linux/15/../../../../lib64/crtn.o -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -O2 -flto=auto -g -grecord-gcc-switches -Werror=format-security -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -mno-omit-leaf-frame-pointer -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,-soname -Wl,libghemical.so.5 -o .libs/libghemical.so.5.0.1 libtool: link: (cd ".libs" && rm -f "libghemical.so.5" && ln -s "libghemical.so.5.0.1" "libghemical.so.5") libtool: link: (cd ".libs" && rm -f "libghemical.so" && ln -s "libghemical.so.5.0.1" "libghemical.so") libtool: link: ( cd ".libs" && rm -f "libghemical.la" && ln -s "../libghemical.la" "libghemical.la" ) make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' typerule.cpp: In member function 'ReadSubRule': typerule.cpp:183:50: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 183 | newring[tmp1[1]] = 0; | ^ typerule.cpp:182:84: note: at offset -1 into destination object of size 0 allocated by 'operator new []' 182 | signed char * newring = new signed char[tmp1[1] + 1]; | ^ Making all in bin Making all in amber make[2]: Nothing to be done for 'all'. Making all in builder make[2]: Nothing to be done for 'all'. Making all in param_mm Making all in default make[3]: Nothing to be done for 'all'. Making all in prmfit make[3]: Nothing to be done for 'all'. Making all in tripos52 make[3]: Nothing to be done for 'all'. make[3]: Nothing to be done for 'all-am'. Making all in param_sf Making all in default make[3]: Nothing to be done for 'all'. make[3]: Nothing to be done for 'all-am'. make[2]: Nothing to be done for 'all-am'. Making all in po make[1]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/po' make[1]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/po' grep: warning: stray \ before # grep: warning: stray \ before # grep: warning: stray \ before # make[1]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/po' file=`echo de | sed 's,.*/,,'`.gmo \ && rm -f $file && /usr/bin/msgfmt -o $file de.po make[1]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/po' make[1]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/po' file=`echo fi | sed 's,.*/,,'`.gmo \ && rm -f $file && /usr/bin/msgfmt -o $file fi.po make[1]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/po' make[1]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/po' file=`echo pt_BR | sed 's,.*/,,'`.gmo \ && rm -f $file && /usr/bin/msgfmt -o $file pt_BR.po make[1]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/po' make[1]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/po' file=`echo mk | sed 's,.*/,,'`.gmo \ && rm -f $file && /usr/bin/msgfmt -o $file mk.po make[1]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/po' make[1]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/po' file=`echo ru | sed 's,.*/,,'`.gmo \ && rm -f $file && /usr/bin/msgfmt -o $file ru.po make[1]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/po' make[1]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/po' file=`echo sq | sed 's,.*/,,'`.gmo \ && rm -f $file && /usr/bin/msgfmt -o $file sq.po make[1]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/po' make[1]: Nothing to be done for 'all-am'. + sed -ir -e 's/^Libs:.*/Libs: -L${libdir} -lghemical/g' libghemical.pc + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.wTrxe1 + umask 022 + cd /builddir/build/BUILD/libghemical-3.0.0-build + '[' /builddir/build/BUILD/libghemical-3.0.0-build/BUILDROOT '!=' / ']' + rm -rf /builddir/build/BUILD/libghemical-3.0.0-build/BUILDROOT ++ dirname /builddir/build/BUILD/libghemical-3.0.0-build/BUILDROOT + mkdir -p /builddir/build/BUILD/libghemical-3.0.0-build + mkdir /builddir/build/BUILD/libghemical-3.0.0-build/BUILDROOT + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd libghemical-3.0.0 + /usr/bin/make install DESTDIR=/builddir/build/BUILD/libghemical-3.0.0-build/BUILDROOT 'INSTALL=/usr/bin/install -p' Making install in src make[1]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' /usr/bin/mkdir -p '/builddir/build/BUILD/libghemical-3.0.0-build/BUILDROOT/usr/lib64' /bin/sh ../libtool --mode=install /usr/bin/install -p libghemical.la '/builddir/build/BUILD/libghemical-3.0.0-build/BUILDROOT/usr/lib64' libtool: install: /usr/bin/install -p .libs/libghemical.so.5.0.1 /builddir/build/BUILD/libghemical-3.0.0-build/BUILDROOT/usr/lib64/libghemical.so.5.0.1 libtool: install: (cd /builddir/build/BUILD/libghemical-3.0.0-build/BUILDROOT/usr/lib64 && { ln -s -f libghemical.so.5.0.1 libghemical.so.5 || { rm -f libghemical.so.5 && ln -s libghemical.so.5.0.1 libghemical.so.5; }; }) libtool: install: (cd /builddir/build/BUILD/libghemical-3.0.0-build/BUILDROOT/usr/lib64 && { ln -s -f libghemical.so.5.0.1 libghemical.so || { rm -f libghemical.so && ln -s libghemical.so.5.0.1 libghemical.so; }; }) libtool: install: /usr/bin/install -p .libs/libghemical.lai /builddir/build/BUILD/libghemical-3.0.0-build/BUILDROOT/usr/lib64/libghemical.la libtool: warning: remember to run 'libtool --finish /usr/lib64' /usr/bin/mkdir -p '/builddir/build/BUILD/libghemical-3.0.0-build/BUILDROOT/usr/include/ghemical' /usr/bin/install -p -m 644 libghemicaldefine.h libghemical-features.h local_i18n.h typedef.h v3d.h atom.h bond.h constraint.h model.h engine.h typerule.h utility.h chn_info.h seqbuild.h mfinder.h eng1_qm.h eng1_qm_mpqc.h eng1_qm_mopac.h eng1_mm.h eng1_mm_tripos52.h tab_mm_tripos52.h eng1_mm_default.h tab_mm_default.h eng1_mm_prmfit.h tab_mm_prmfit.h eng1_sf.h eng1_sf_ua.h eng1_sf_cg.h eng2_qm_mm.h notice.h conjgrad.h intcrd.h search.h geomopt.h moldyn.h pop_ana.h sasaeval.h resonance.h '/builddir/build/BUILD/libghemical-3.0.0-build/BUILDROOT/usr/include/ghemical' make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' make[1]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/src' Making install in bin make[1]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/bin' Making install in amber make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/bin/amber' make[3]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/bin/amber' make[3]: Nothing to be done for 'install-exec-am'. /usr/bin/mkdir -p '/builddir/build/BUILD/libghemical-3.0.0-build/BUILDROOT/usr/share/libghemical/3.0.0/amber' /usr/bin/install -p -m 644 all_amino94_MOD.in all_aminoct94.in all_aminont94.in all_nuc94_MOD.in parm99_frcmod_ff99SB.dat '/builddir/build/BUILD/libghemical-3.0.0-build/BUILDROOT/usr/share/libghemical/3.0.0/amber' make[3]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/bin/amber' make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/bin/amber' Making install in builder make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/bin/builder' make[3]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/bin/builder' make[3]: Nothing to be done for 'install-exec-am'. /usr/bin/mkdir -p '/builddir/build/BUILD/libghemical-3.0.0-build/BUILDROOT/usr/share/libghemical/3.0.0/builder' /usr/bin/install -p -m 644 amino.txt nucleic.txt '/builddir/build/BUILD/libghemical-3.0.0-build/BUILDROOT/usr/share/libghemical/3.0.0/builder' make[3]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/bin/builder' make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/bin/builder' Making install in param_mm make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/bin/param_mm' Making install in default make[3]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/bin/param_mm/default' make[4]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/bin/param_mm/default' make[4]: Nothing to be done for 'install-exec-am'. /usr/bin/mkdir -p '/builddir/build/BUILD/libghemical-3.0.0-build/BUILDROOT/usr/share/libghemical/3.0.0/param_mm/default' /usr/bin/install -p -m 644 atomtypes.txt parameters1.txt parameters2.txt parameters3.txt parameters4.txt '/builddir/build/BUILD/libghemical-3.0.0-build/BUILDROOT/usr/share/libghemical/3.0.0/param_mm/default' make[4]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/bin/param_mm/default' make[3]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/bin/param_mm/default' Making install in prmfit make[3]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/bin/param_mm/prmfit' make[4]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/bin/param_mm/prmfit' make[4]: Nothing to be done for 'install-exec-am'. /usr/bin/mkdir -p '/builddir/build/BUILD/libghemical-3.0.0-build/BUILDROOT/usr/share/libghemical/3.0.0/param_mm/prmfit' /usr/bin/install -p -m 644 atomtypes.txt parameters1.txt parameters2.txt parameters3.txt parameters4.txt '/builddir/build/BUILD/libghemical-3.0.0-build/BUILDROOT/usr/share/libghemical/3.0.0/param_mm/prmfit' make[4]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/bin/param_mm/prmfit' make[3]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/bin/param_mm/prmfit' Making install in tripos52 make[3]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/bin/param_mm/tripos52' make[4]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/bin/param_mm/tripos52' make[4]: Nothing to be done for 'install-exec-am'. /usr/bin/mkdir -p '/builddir/build/BUILD/libghemical-3.0.0-build/BUILDROOT/usr/share/libghemical/3.0.0/param_mm/tripos52' /usr/bin/install -p -m 644 atomtypes.txt parameters1.txt parameters2.txt parameters3.txt parameters4.txt parameters5.txt '/builddir/build/BUILD/libghemical-3.0.0-build/BUILDROOT/usr/share/libghemical/3.0.0/param_mm/tripos52' make[4]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/bin/param_mm/tripos52' make[3]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/bin/param_mm/tripos52' make[3]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/bin/param_mm' make[4]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/bin/param_mm' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/bin/param_mm' make[3]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/bin/param_mm' make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/bin/param_mm' Making install in param_sf make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/bin/param_sf' Making install in default make[3]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/bin/param_sf/default' make[4]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/bin/param_sf/default' make[4]: Nothing to be done for 'install-exec-am'. /usr/bin/mkdir -p '/builddir/build/BUILD/libghemical-3.0.0-build/BUILDROOT/usr/share/libghemical/3.0.0/param_sf/default' /usr/bin/install -p -m 644 loopdip.txt looptor.txt nonbonded.txt '/builddir/build/BUILD/libghemical-3.0.0-build/BUILDROOT/usr/share/libghemical/3.0.0/param_sf/default' make[4]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/bin/param_sf/default' make[3]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/bin/param_sf/default' make[3]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/bin/param_sf' make[4]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/bin/param_sf' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/bin/param_sf' make[3]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/bin/param_sf' make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/bin/param_sf' make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/bin' make[3]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/bin' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/bin' make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/bin' make[1]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/bin' Making install in po make[1]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/po' grep: warning: stray \ before # grep: warning: stray \ before # grep: warning: stray \ before # grep: warning: stray \ before # grep: warning: stray \ before # linguas="de fi mk pt_BR ru sq "; \ for lang in $linguas; do \ dir=/builddir/build/BUILD/libghemical-3.0.0-build/BUILDROOT/usr/share/locale/$lang/LC_MESSAGES; \ /bin/sh /builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/install-sh -d $dir; \ if test -r $lang.gmo; then \ /usr/bin/install -p -m 644 $lang.gmo $dir/libghemical.mo; \ echo "installing $lang.gmo as $dir/libghemical.mo"; \ else \ /usr/bin/install -p -m 644 ./$lang.gmo $dir/libghemical.mo; \ echo "installing ./$lang.gmo as" \ "$dir/libghemical.mo"; \ fi; \ if test -r $lang.gmo.m; then \ /usr/bin/install -p -m 644 $lang.gmo.m $dir/libghemical.mo.m; \ echo "installing $lang.gmo.m as $dir/libghemical.mo.m"; \ else \ if test -r ./$lang.gmo.m ; then \ /usr/bin/install -p -m 644 ./$lang.gmo.m \ $dir/libghemical.mo.m; \ echo "installing ./$lang.gmo.m as" \ "$dir/libghemical.mo.m"; \ else \ true; \ fi; \ fi; \ done installing de.gmo as /builddir/build/BUILD/libghemical-3.0.0-build/BUILDROOT/usr/share/locale/de/LC_MESSAGES/libghemical.mo installing fi.gmo as /builddir/build/BUILD/libghemical-3.0.0-build/BUILDROOT/usr/share/locale/fi/LC_MESSAGES/libghemical.mo installing mk.gmo as /builddir/build/BUILD/libghemical-3.0.0-build/BUILDROOT/usr/share/locale/mk/LC_MESSAGES/libghemical.mo installing pt_BR.gmo as /builddir/build/BUILD/libghemical-3.0.0-build/BUILDROOT/usr/share/locale/pt_BR/LC_MESSAGES/libghemical.mo installing ru.gmo as /builddir/build/BUILD/libghemical-3.0.0-build/BUILDROOT/usr/share/locale/ru/LC_MESSAGES/libghemical.mo installing sq.gmo as /builddir/build/BUILD/libghemical-3.0.0-build/BUILDROOT/usr/share/locale/sq/LC_MESSAGES/libghemical.mo make[1]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/po' make[1]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0' make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0' make[2]: Nothing to be done for 'install-exec-am'. /usr/bin/mkdir -p '/builddir/build/BUILD/libghemical-3.0.0-build/BUILDROOT/usr/lib64/pkgconfig' /usr/bin/install -p -m 644 libghemical.pc '/builddir/build/BUILD/libghemical-3.0.0-build/BUILDROOT/usr/lib64/pkgconfig' make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0' make[1]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0' + find /builddir/build/BUILD/libghemical-3.0.0-build/BUILDROOT/usr/lib64 -name '*.la' -exec rm -rf '{}' ';' + /usr/lib/rpm/find-lang.sh /builddir/build/BUILD/libghemical-3.0.0-build/BUILDROOT libghemical + /usr/bin/find-debuginfo -j4 --strict-build-id -m -i --build-id-seed 3.0.0-25.fc42 --unique-debug-suffix -3.0.0-25.fc42.aarch64 --unique-debug-src-base libghemical-3.0.0-25.fc42.aarch64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0 find-debuginfo: starting Extracting debug info from 1 files DWARF-compressing 1 files sepdebugcrcfix: Updated 1 CRC32s, 0 CRC32s did match. Creating .debug symlinks for symlinks to ELF files Copying sources found by 'debugedit -l' to /usr/src/debug/libghemical-3.0.0-25.fc42.aarch64 find-debuginfo: done + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j4 + /usr/lib/rpm/redhat/brp-python-hardlink + /usr/bin/add-determinism --brp -j4 /builddir/build/BUILD/libghemical-3.0.0-build/BUILDROOT Scanned 38 directories and 141 files, processed 0 inodes, 0 modified (0 replaced + 0 rewritten), 0 unsupported format, 0 errors Reading /builddir/build/BUILD/libghemical-3.0.0-build/SPECPARTS/rpm-debuginfo.specpart Processing files: libghemical-3.0.0-25.fc42.aarch64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.nqz84N + umask 022 + cd /builddir/build/BUILD/libghemical-3.0.0-build + cd libghemical-3.0.0 + DOCDIR=/builddir/build/BUILD/libghemical-3.0.0-build/BUILDROOT/usr/share/doc/libghemical + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILD/libghemical-3.0.0-build/BUILDROOT/usr/share/doc/libghemical + cp -pr /builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/AUTHORS /builddir/build/BUILD/libghemical-3.0.0-build/BUILDROOT/usr/share/doc/libghemical + cp -pr /builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/ChangeLog /builddir/build/BUILD/libghemical-3.0.0-build/BUILDROOT/usr/share/doc/libghemical + cp -pr /builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/TODO /builddir/build/BUILD/libghemical-3.0.0-build/BUILDROOT/usr/share/doc/libghemical + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.ex6z5J + umask 022 + cd /builddir/build/BUILD/libghemical-3.0.0-build + cd libghemical-3.0.0 + LICENSEDIR=/builddir/build/BUILD/libghemical-3.0.0-build/BUILDROOT/usr/share/licenses/libghemical + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILD/libghemical-3.0.0-build/BUILDROOT/usr/share/licenses/libghemical + cp -pr /builddir/build/BUILD/libghemical-3.0.0-build/libghemical-3.0.0/COPYING /builddir/build/BUILD/libghemical-3.0.0-build/BUILDROOT/usr/share/licenses/libghemical + RPM_EC=0 ++ jobs -p + exit 0 Provides: libghemical = 3.0.0-25.fc42 libghemical(aarch-64) = 3.0.0-25.fc42 libghemical.so.5()(64bit) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: ld-linux-aarch64.so.1()(64bit) ld-linux-aarch64.so.1(GLIBC_2.17)(64bit) libSCbasis.so.7()(64bit) libSCcints.so.7()(64bit) libSCclass.so.7()(64bit) libSCcontainer.so.7()(64bit) libSCdft.so.7()(64bit) libSCgroup.so.7()(64bit) libSCintv3.so.7()(64bit) libSCisosurf.so.7()(64bit) libSCkeyval.so.7()(64bit) libSCmbpt.so.7()(64bit) libSCmbptr12.so.7()(64bit) libSCmisc.so.7()(64bit) libSCmolecule.so.7()(64bit) libSCoint3.so.7()(64bit) libSCoptimize.so.7()(64bit) libSCoptions.so.7()(64bit) libSCpsi.so.7()(64bit) libSCref.so.7()(64bit) libSCrender.so.7()(64bit) libSCscf.so.7()(64bit) libSCscmat.so.7()(64bit) libSCsolvent.so.7()(64bit) libSCstate.so.7()(64bit) libSCsymmetry.so.7()(64bit) libSCwfn.so.7()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.17)(64bit) libc.so.6(GLIBC_ABI_DT_RELR)(64bit) libderiv-stable.so.1()(64bit) libflexiblas.so.3()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgfortran.so.5()(64bit) libint-stable.so.1()(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.17)(64bit) libm.so.6(GLIBC_2.29)(64bit) libmopac7.so.1()(64bit) libr12-stable.so.1()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.15)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) rtld(GNU_HASH) Processing files: libghemical-devel-3.0.0-25.fc42.aarch64 Provides: libghemical-devel = 3.0.0-25.fc42 libghemical-devel(aarch-64) = 3.0.0-25.fc42 pkgconfig(libghemical) = 3.0.0 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: /usr/bin/pkg-config libghemical.so.5()(64bit) pkgconfig(libmopac7) Processing files: libghemical-debugsource-3.0.0-25.fc42.aarch64 Provides: libghemical-debugsource = 3.0.0-25.fc42 libghemical-debugsource(aarch-64) = 3.0.0-25.fc42 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: libghemical-debuginfo-3.0.0-25.fc42.aarch64 Provides: debuginfo(build-id) = 1f29cc9d7e9264bdf562004461c31832432a45e9 libghemical-debuginfo = 3.0.0-25.fc42 libghemical-debuginfo(aarch-64) = 3.0.0-25.fc42 libghemical.so.5.0.1-3.0.0-25.fc42.aarch64.debug()(64bit) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: libghemical-debugsource(aarch-64) = 3.0.0-25.fc42 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILD/libghemical-3.0.0-build/BUILDROOT Wrote: /builddir/build/RPMS/libghemical-devel-3.0.0-25.fc42.aarch64.rpm Wrote: /builddir/build/RPMS/libghemical-debugsource-3.0.0-25.fc42.aarch64.rpm Wrote: /builddir/build/RPMS/libghemical-3.0.0-25.fc42.aarch64.rpm Wrote: /builddir/build/RPMS/libghemical-debuginfo-3.0.0-25.fc42.aarch64.rpm Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.Zimd71 + umask 022 + cd /builddir/build/BUILD/libghemical-3.0.0-build + test -d /builddir/build/BUILD/libghemical-3.0.0-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/libghemical-3.0.0-build + rm -rf /builddir/build/BUILD/libghemical-3.0.0-build + RPM_EC=0 ++ jobs -p + exit 0 Finish: rpmbuild libghemical-3.0.0-25.fc42.src.rpm Finish: build phase for libghemical-3.0.0-25.fc42.src.rpm INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-aarch64-1733964338.291873/root/var/log/dnf5.log INFO: chroot_scan: creating tarball /var/lib/copr-rpmbuild/results/chroot_scan.tar.gz /bin/tar: Removing leading `/' from member names INFO: Done(/var/lib/copr-rpmbuild/results/libghemical-3.0.0-25.fc42.src.rpm) Config(child) 0 minutes 52 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool Package info: { "packages": [ { "name": "libghemical-debuginfo", "epoch": null, "version": "3.0.0", "release": "25.fc42", "arch": "aarch64" }, { "name": "libghemical", "epoch": null, "version": "3.0.0", "release": "25.fc42", "arch": "src" }, { "name": "libghemical-debugsource", "epoch": null, "version": "3.0.0", "release": "25.fc42", "arch": "aarch64" }, { "name": "libghemical-devel", "epoch": null, "version": "3.0.0", "release": "25.fc42", "arch": "aarch64" }, { "name": "libghemical", "epoch": null, "version": "3.0.0", "release": "25.fc42", "arch": "aarch64" } ] } RPMResults finished