Warning: Permanently added '34.203.200.253' (ECDSA) to the list of known hosts. Running: /usr/bin/copr-rpmbuild --verbose --drop-resultdir --build-id 1682332 --chroot epel-7-x86_64 --detached Version: 0.40 Task: {'background': True, 'build_id': 1682332, 'buildroot_pkgs': [], 'chroot': 'epel-7-x86_64', 'enable_net': True, 'fetch_sources_only': True, 'git_hash': '42ec136a539b7e6c3d4104a6e46b46db56b890a3', 'git_repo': 'huaweihiq/Huawei-HiQ/h5py', 'memory_reqs': 2048, 'package_name': 'h5py', 'package_version': '2.10.0-4.el7', 'project_dirname': 'Huawei-HiQ', 'project_name': 'Huawei-HiQ', 'project_owner': 'huaweihiq', 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/huaweihiq/Huawei-HiQ/epel-7-x86_64/', 'id': 'copr_base', 'module_hotfixes': True, 'name': 'Copr repository'}], 'sandbox': 'huaweihiq/Huawei-HiQ--huaweihiq', 'source_json': {'clone_url': 'https://copr-dist-git.fedorainfracloud.org/git/huaweihiq/Huawei-HiQ/h5py.git', 'committish': '42ec136a539b7e6c3d4104a6e46b46db56b890a3'}, 'source_type': 8, 'submitter': 'huaweihiq', 'task_id': '1682332-epel-7-x86_64', 'timeout': 108000, 'use_bootstrap_container': False, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/huaweihiq/Huawei-HiQ/h5py.git /tmp/copr-rpmbuild-18fc0t1r/obtain-sources/h5py --depth 500 --no-single-branch cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/huaweihiq/Huawei-HiQ/h5py.git', '/tmp/copr-rpmbuild-18fc0t1r/obtain-sources/h5py', '--depth', '500', '--no-single-branch'] cwd: . rc: 0 stdout: stderr: Cloning into '/tmp/copr-rpmbuild-18fc0t1r/obtain-sources/h5py'... Running: git checkout 42ec136a539b7e6c3d4104a6e46b46db56b890a3 cmd: ['git', 'checkout', '42ec136a539b7e6c3d4104a6e46b46db56b890a3'] cwd: /tmp/copr-rpmbuild-18fc0t1r/obtain-sources/h5py rc: 0 stdout: stderr: Note: switching to '42ec136a539b7e6c3d4104a6e46b46db56b890a3'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at 42ec136 automatic import of h5py Running: cp -r . /tmp/copr-rpmbuild-18fc0t1r cmd: ['cp', '-r', '.', '/tmp/copr-rpmbuild-18fc0t1r'] cwd: /tmp/copr-rpmbuild-18fc0t1r/obtain-sources/h5py rc: 0 stdout: stderr: Generated rpkg config: [rpkg] preprocess_spec = True # auto-packing is deprecated: auto_pack = True [git] lookaside = https://copr-dist-git.fedorainfracloud.org/repo/pkgs/%(ns2)s/%(ns1)s/%(name)s/%(filename)s/%(hashtype)s/%(hash)s/%(filename)s anongiturl = https://copr-dist-git.fedorainfracloud.org/git/%(module)s Writing config into /tmp/copr-rpmbuild-18fc0t1r/obtain-sources/.config/rpkg.conf Running: rpkg -C /tmp/copr-rpmbuild-18fc0t1r/obtain-sources/.config/rpkg.conf sources --outdir /tmp/copr-rpmbuild-18fc0t1r cmd: ['rpkg', '-C', '/tmp/copr-rpmbuild-18fc0t1r/obtain-sources/.config/rpkg.conf', 'sources', '--outdir', '/tmp/copr-rpmbuild-18fc0t1r'] cwd: /tmp/copr-rpmbuild-18fc0t1r/obtain-sources/h5py rc: 0 stdout: Downloading h5py-2.10.0.tar.gz from lookaside cache at copr-dist-git.fedorainfracloud.org stderr: /usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated Running (timeout=108000): unbuffer mock --buildsrpm --spec /tmp/copr-rpmbuild-18fc0t1r/h5py.spec --sources /tmp/copr-rpmbuild-18fc0t1r --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1600863672.543215 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 2.6 starting (python version = 3.8.5)... WARNING: Not using '/usr/bin/yum', it is symlink to '/usr/bin/dnf-3' INFO: Using 'dnf' instead of 'yum' Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/tmp/copr-rpmbuild-18fc0t1r/h5py.spec) Config(epel-7-x86_64) Start: clean chroot Finish: clean chroot Start: chroot init INFO: mounting tmpfs at /var/lib/mock/epel-7-x86_64-1600863672.543215/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin Mock Version: 2.6 INFO: Mock Version: 2.6 Start: dnf install No matches found for the following disable plugin patterns: local, spacewalk Copr repository 218 kB/s | 38 kB 00:00 BaseOS 28 MB/s | 10 MB 00:00 updates 29 MB/s | 5.0 MB 00:00 epel 78 MB/s | 16 MB 00:00 extras 1.3 MB/s | 275 kB 00:00 sclo 1.4 MB/s | 1.1 MB 00:00 sclo-rh 67 MB/s | 14 MB 00:00 Dependencies resolved. ================================================================================ Package Arch Version Repo Size ================================================================================ Installing group/module packages: bash  x86_64 4.2.46-34.el7 base 1.0 M bzip2  x86_64 1.0.6-13.el7 base 52 k coreutils  x86_64 8.22-24.el7 base 3.3 M cpio  x86_64 2.11-27.el7 base 211 k diffutils  x86_64 3.3-5.el7 base 322 k epel-release  noarch 7-12 epel 15 k epel-rpm-macros  noarch 7-26 epel 16 k findutils  x86_64 1:4.5.11-6.el7 base 559 k gawk  x86_64 4.0.2-4.el7_3.1 base 874 k gcc  x86_64 4.8.5-39.el7 base 16 M gcc-c++  x86_64 4.8.5-39.el7 base 7.2 M grep  x86_64 2.20-3.el7 base 344 k gzip  x86_64 1.5-10.el7 base 130 k info  x86_64 5.1-5.el7 base 233 k make  x86_64 1:3.82-24.el7 base 421 k patch  x86_64 2.7.1-12.el7_7 base 111 k redhat-rpm-config  noarch 9.1.0-88.el7.centos base 81 k rpm-build  x86_64 4.11.3-43.el7 base 149 k sed  x86_64 4.2.2-6.el7 base 231 k shadow-utils  x86_64 2:4.6-5.el7 base 1.2 M tar  x86_64 2:1.26-35.el7 base 846 k unzip  x86_64 6.0-21.el7 base 171 k util-linux  x86_64 2.23.2-63.el7 base 2.0 M which  x86_64 2.20-7.el7 base 41 k xz  x86_64 5.2.2-1.el7 base 229 k Installing dependencies: acl  x86_64 2.2.51-15.el7 base 81 k audit-libs  x86_64 2.8.5-4.el7 base 102 k basesystem  noarch 10.0-7.el7.centos base 5.0 k binutils  x86_64 2.27-43.base.el7_8.1 updates 5.9 M bzip2-libs  x86_64 1.0.6-13.el7 base 40 k ca-certificates  noarch 2020.2.41-70.0.el7_8 updates 382 k centos-release  x86_64 7-8.2003.0.el7.centos base 26 k chkconfig  x86_64 1.7.4-1.el7 base 181 k cpp  x86_64 4.8.5-39.el7 base 5.9 M cracklib  x86_64 2.9.0-11.el7 base 80 k cracklib-dicts  x86_64 2.9.0-11.el7 base 3.6 M cryptsetup-libs  x86_64 2.0.3-6.el7 base 339 k curl  x86_64 7.29.0-57.el7_8.1 updates 271 k cyrus-sasl-lib  x86_64 2.1.26-23.el7 base 155 k dbus  x86_64 1:1.10.24-14.el7_8 updates 245 k dbus-libs  x86_64 1:1.10.24-14.el7_8 updates 169 k device-mapper  x86_64 7:1.02.164-7.el7_8.2 updates 295 k device-mapper-libs  x86_64 7:1.02.164-7.el7_8.2 updates 324 k dracut  x86_64 033-568.el7 base 329 k dwz  x86_64 0.11-3.el7 base 99 k elfutils  x86_64 0.176-4.el7 base 308 k elfutils-default-yama-scope  noarch 0.176-4.el7 base 33 k elfutils-libelf  x86_64 0.176-4.el7 base 195 k elfutils-libs  x86_64 0.176-4.el7 base 291 k expat  x86_64 2.1.0-11.el7 base 81 k file  x86_64 5.11-36.el7 base 57 k file-libs  x86_64 5.11-36.el7 base 340 k filesystem  x86_64 3.2-25.el7 base 1.0 M gdb  x86_64 7.6.1-119.el7 base 2.4 M gdbm  x86_64 1.10-8.el7 base 70 k glib2  x86_64 2.56.1-5.el7 base 2.5 M glibc  x86_64 2.17-307.el7.1 base 3.6 M glibc-common  x86_64 2.17-307.el7.1 base 11 M glibc-devel  x86_64 2.17-307.el7.1 base 1.1 M glibc-headers  x86_64 2.17-307.el7.1 base 689 k gmp  x86_64 1:6.0.0-15.el7 base 281 k gnupg2  x86_64 2.0.22-5.el7_5 base 1.5 M groff-base  x86_64 1.22.2-8.el7 base 942 k hardlink  x86_64 1:1.0-19.el7 base 14 k json-c  x86_64 0.11-4.el7_0 base 31 k kernel-headers  x86_64 3.10.0-1127.19.1.el7 updates 9.0 M keyutils-libs  x86_64 1.5.8-3.el7 base 25 k kmod  x86_64 20-28.el7 base 123 k kmod-libs  x86_64 20-28.el7 base 51 k kpartx  x86_64 0.4.9-131.el7 base 80 k krb5-libs  x86_64 1.15.1-46.el7 base 809 k libacl  x86_64 2.2.51-15.el7 base 27 k libassuan  x86_64 2.1.0-3.el7 base 63 k libattr  x86_64 2.4.46-13.el7 base 18 k libblkid  x86_64 2.23.2-63.el7 base 182 k libcap  x86_64 2.22-11.el7 base 47 k libcap-ng  x86_64 0.7.5-4.el7 base 25 k libcom_err  x86_64 1.42.9-17.el7 base 42 k libcurl  x86_64 7.29.0-57.el7_8.1 updates 223 k libdb  x86_64 5.3.21-25.el7 base 720 k libdb-utils  x86_64 5.3.21-25.el7 base 132 k libffi  x86_64 3.0.13-19.el7 base 30 k libgcc  x86_64 4.8.5-39.el7 base 102 k libgcrypt  x86_64 1.5.3-14.el7 base 263 k libgomp  x86_64 4.8.5-39.el7 base 158 k libgpg-error  x86_64 1.12-3.el7 base 87 k libidn  x86_64 1.28-4.el7 base 209 k libmount  x86_64 2.23.2-63.el7 base 184 k libmpc  x86_64 1.0.1-3.el7 base 51 k libpwquality  x86_64 1.2.3-5.el7 base 85 k libselinux  x86_64 2.5-15.el7 base 162 k libsemanage  x86_64 2.5-14.el7 base 151 k libsepol  x86_64 2.5-10.el7 base 297 k libsmartcols  x86_64 2.23.2-63.el7 base 142 k libssh2  x86_64 1.8.0-3.el7 base 88 k libstdc++  x86_64 4.8.5-39.el7 base 305 k libstdc++-devel  x86_64 4.8.5-39.el7 base 1.5 M libtasn1  x86_64 4.10-1.el7 base 320 k libuser  x86_64 0.60-9.el7 base 400 k libutempter  x86_64 1.1.6-4.el7 base 25 k libuuid  x86_64 2.23.2-63.el7 base 83 k libverto  x86_64 0.2.5-4.el7 base 16 k libxml2  x86_64 2.9.1-6.el7.4 base 668 k lua  x86_64 5.1.4-15.el7 base 201 k lz4  x86_64 1.7.5-3.el7 base 99 k mpfr  x86_64 3.1.1-4.el7 base 203 k ncurses  x86_64 5.9-14.20130511.el7_4 base 304 k ncurses-base  noarch 5.9-14.20130511.el7_4 base 68 k ncurses-libs  x86_64 5.9-14.20130511.el7_4 base 316 k nspr  x86_64 4.21.0-1.el7 base 127 k nss  x86_64 3.44.0-7.el7_7 base 854 k nss-pem  x86_64 1.0.3-7.el7 base 74 k nss-softokn  x86_64 3.44.0-8.el7_7 base 330 k nss-softokn-freebl  x86_64 3.44.0-8.el7_7 base 224 k nss-sysinit  x86_64 3.44.0-7.el7_7 base 65 k nss-tools  x86_64 3.44.0-7.el7_7 base 528 k nss-util  x86_64 3.44.0-4.el7_7 base 79 k openldap  x86_64 2.4.44-21.el7_6 base 356 k openssl-libs  x86_64 1:1.0.2k-19.el7 base 1.2 M p11-kit  x86_64 0.23.5-3.el7 base 252 k p11-kit-trust  x86_64 0.23.5-3.el7 base 129 k pam  x86_64 1.1.8-23.el7 base 721 k pcre  x86_64 8.32-17.el7 base 422 k perl  x86_64 4:5.16.3-295.el7 base 8.0 M perl-Carp  noarch 1.26-244.el7 base 19 k perl-Encode  x86_64 2.51-7.el7 base 1.5 M perl-Exporter  noarch 5.68-3.el7 base 28 k perl-File-Path  noarch 2.09-2.el7 base 26 k perl-File-Temp  noarch 0.23.01-3.el7 base 56 k perl-Filter  x86_64 1.49-3.el7 base 76 k perl-Getopt-Long  noarch 2.40-3.el7 base 56 k perl-HTTP-Tiny  noarch 0.033-3.el7 base 38 k perl-PathTools  x86_64 3.40-5.el7 base 82 k perl-Pod-Escapes  noarch 1:1.04-295.el7 base 51 k perl-Pod-Perldoc  noarch 3.20-4.el7 base 87 k perl-Pod-Simple  noarch 1:3.28-4.el7 base 216 k perl-Pod-Usage  noarch 1.63-3.el7 base 27 k perl-Scalar-List-Utils  x86_64 1.27-248.el7 base 36 k perl-Socket  x86_64 2.010-5.el7 base 49 k perl-Storable  x86_64 2.45-3.el7 base 77 k perl-Text-ParseWords  noarch 3.29-4.el7 base 14 k perl-Thread-Queue  noarch 3.02-2.el7 base 17 k perl-Time-HiRes  x86_64 4:1.9725-3.el7 base 45 k perl-Time-Local  noarch 1.2300-2.el7 base 24 k perl-constant  noarch 1.27-2.el7 base 19 k perl-libs  x86_64 4:5.16.3-295.el7 base 689 k perl-macros  x86_64 4:5.16.3-295.el7 base 44 k perl-parent  noarch 1:0.225-244.el7 base 12 k perl-podlators  noarch 2.5.1-3.el7 base 112 k perl-srpm-macros  noarch 1-8.el7 base 4.6 k perl-threads  x86_64 1.87-4.el7 base 49 k perl-threads-shared  x86_64 1.43-6.el7 base 39 k pinentry  x86_64 0.8.1-17.el7 base 73 k pkgconfig  x86_64 1:0.27.1-4.el7 base 54 k popt  x86_64 1.13-16.el7 base 42 k procps-ng  x86_64 3.3.10-27.el7 base 291 k pth  x86_64 2.0.7-23.el7 base 89 k python-libs  x86_64 2.7.5-88.el7 base 5.6 M python-rpm-macros  noarch 3-32.el7 base 8.8 k python-srpm-macros  noarch 3-32.el7 base 8.4 k python2-rpm-macros  noarch 3-32.el7 base 7.7 k qrencode-libs  x86_64 3.4.1-3.el7 base 50 k readline  x86_64 6.2-11.el7 base 193 k rpm  x86_64 4.11.3-43.el7 base 1.2 M rpm-build-libs  x86_64 4.11.3-43.el7 base 107 k rpm-libs  x86_64 4.11.3-43.el7 base 278 k setup  noarch 2.8.71-11.el7 base 166 k shared-mime-info  x86_64 1.8-5.el7 base 312 k sqlite  x86_64 3.7.17-8.el7_7.1 base 394 k systemd  x86_64 219-73.el7_8.9 updates 5.1 M systemd-libs  x86_64 219-73.el7_8.9 updates 416 k tzdata  noarch 2020a-1.el7 updates 495 k ustr  x86_64 1.0.4-16.el7 base 92 k xz-libs  x86_64 5.2.2-1.el7 base 103 k zip  x86_64 3.0-11.el7 base 260 k zlib  x86_64 1.2.7-18.el7 base 90 k Installing Groups: Buildsystem building group Transaction Summary ================================================================================ Install 176 Packages Total download size: 131 M Installed size: 562 M Downloading Packages: (1/176): basesystem-10.0-7.el7.centos.noarch.rp 1.8 MB/s | 5.0 kB 00:00 (2/176): audit-libs-2.8.5-4.el7.x86_64.rpm 21 MB/s | 102 kB 00:00 (3/176): acl-2.2.51-15.el7.x86_64.rpm 13 MB/s | 81 kB 00:00 (4/176): bzip2-1.0.6-13.el7.x86_64.rpm 24 MB/s | 52 kB 00:00 (5/176): bzip2-libs-1.0.6-13.el7.x86_64.rpm 19 MB/s | 40 kB 00:00 (6/176): centos-release-7-8.2003.0.el7.centos.x 15 MB/s | 26 kB 00:00 (7/176): chkconfig-1.7.4-1.el7.x86_64.rpm 38 MB/s | 181 kB 00:00 (8/176): cpio-2.11-27.el7.x86_64.rpm 34 MB/s | 211 kB 00:00 (9/176): bash-4.2.46-34.el7.x86_64.rpm 41 MB/s | 1.0 MB 00:00 (10/176): cracklib-2.9.0-11.el7.x86_64.rpm 25 MB/s | 80 kB 00:00 (11/176): coreutils-8.22-24.el7.x86_64.rpm 54 MB/s | 3.3 MB 00:00 (12/176): cryptsetup-libs-2.0.3-6.el7.x86_64.rp 53 MB/s | 339 kB 00:00 (13/176): cyrus-sasl-lib-2.1.26-23.el7.x86_64.r 34 MB/s | 155 kB 00:00 (14/176): diffutils-3.3-5.el7.x86_64.rpm 55 MB/s | 322 kB 00:00 (15/176): cracklib-dicts-2.9.0-11.el7.x86_64.rp 49 MB/s | 3.6 MB 00:00 (16/176): dracut-033-568.el7.x86_64.rpm 16 MB/s | 329 kB 00:00 (17/176): dwz-0.11-3.el7.x86_64.rpm 18 MB/s | 99 kB 00:00 (18/176): elfutils-default-yama-scope-0.176-4.e 12 MB/s | 33 kB 00:00 (19/176): elfutils-0.176-4.el7.x86_64.rpm 43 MB/s | 308 kB 00:00 (20/176): elfutils-libelf-0.176-4.el7.x86_64.rp 37 MB/s | 195 kB 00:00 (21/176): expat-2.1.0-11.el7.x86_64.rpm 35 MB/s | 81 kB 00:00 (22/176): elfutils-libs-0.176-4.el7.x86_64.rpm 37 MB/s | 291 kB 00:00 (23/176): file-5.11-36.el7.x86_64.rpm 19 MB/s | 57 kB 00:00 (24/176): file-libs-5.11-36.el7.x86_64.rpm 51 MB/s | 340 kB 00:00 (25/176): cpp-4.8.5-39.el7.x86_64.rpm 44 MB/s | 5.9 MB 00:00 (26/176): filesystem-3.2-25.el7.x86_64.rpm 26 MB/s | 1.0 MB 00:00 (27/176): findutils-4.5.11-6.el7.x86_64.rpm 14 MB/s | 559 kB 00:00 (28/176): gawk-4.0.2-4.el7_3.1.x86_64.rpm 40 MB/s | 874 kB 00:00 (29/176): gdb-7.6.1-119.el7.x86_64.rpm 62 MB/s | 2.4 MB 00:00 (30/176): gdbm-1.10-8.el7.x86_64.rpm 23 MB/s | 70 kB 00:00 (31/176): glib2-2.56.1-5.el7.x86_64.rpm 64 MB/s | 2.5 MB 00:00 (32/176): gcc-c++-4.8.5-39.el7.x86_64.rpm 53 MB/s | 7.2 MB 00:00 (33/176): glibc-2.17-307.el7.1.x86_64.rpm 42 MB/s | 3.6 MB 00:00 (34/176): glibc-devel-2.17-307.el7.1.x86_64.rpm 60 MB/s | 1.1 MB 00:00 (35/176): glibc-headers-2.17-307.el7.1.x86_64.r 56 MB/s | 689 kB 00:00 (36/176): gmp-6.0.0-15.el7.x86_64.rpm 46 MB/s | 281 kB 00:00 (37/176): gnupg2-2.0.22-5.el7_5.x86_64.rpm 62 MB/s | 1.5 MB 00:00 (38/176): grep-2.20-3.el7.x86_64.rpm 52 MB/s | 344 kB 00:00 (39/176): groff-base-1.22.2-8.el7.x86_64.rpm 58 MB/s | 942 kB 00:00 (40/176): gzip-1.5-10.el7.x86_64.rpm 33 MB/s | 130 kB 00:00 (41/176): hardlink-1.0-19.el7.x86_64.rpm 7.7 MB/s | 14 kB 00:00 (42/176): gcc-4.8.5-39.el7.x86_64.rpm 48 MB/s | 16 MB 00:00 (43/176): info-5.1-5.el7.x86_64.rpm 3.5 MB/s | 233 kB 00:00 (44/176): json-c-0.11-4.el7_0.x86_64.rpm 16 MB/s | 31 kB 00:00 (45/176): keyutils-libs-1.5.8-3.el7.x86_64.rpm 9.2 MB/s | 25 kB 00:00 (46/176): kmod-libs-20-28.el7.x86_64.rpm 26 MB/s | 51 kB 00:00 (47/176): kmod-20-28.el7.x86_64.rpm 29 MB/s | 123 kB 00:00 (48/176): kpartx-0.4.9-131.el7.x86_64.rpm 32 MB/s | 80 kB 00:00 (49/176): libacl-2.2.51-15.el7.x86_64.rpm 17 MB/s | 27 kB 00:00 (50/176): libassuan-2.1.0-3.el7.x86_64.rpm 25 MB/s | 63 kB 00:00 (51/176): libattr-2.4.46-13.el7.x86_64.rpm 7.9 MB/s | 18 kB 00:00 (52/176): krb5-libs-1.15.1-46.el7.x86_64.rpm 54 MB/s | 809 kB 00:00 (53/176): libblkid-2.23.2-63.el7.x86_64.rpm 24 MB/s | 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/var/lib/mock/epel-7-x86_64-1600863672.543215/root/var/cache/dnf/epel-b7d9da81043aa7ab/packages/epel-release-7-12.noarch.rpm: Header V3 RSA/SHA256 Signature, key ID 352c64e5: NOKEY epel 1.6 MB/s | 1.6 kB 00:00 Importing GPG key 0x352C64E5: Userid : "Fedora EPEL (7) " Fingerprint: 91E9 7D7C 4A5E 96F1 7F3E 888F 6A2F AEA2 352C 64E5 From : /usr/share/distribution-gpg-keys/epel/RPM-GPG-KEY-EPEL-7 Key imported successfully Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Running scriptlet: filesystem-3.2-25.el7.x86_64 1/1 Preparing : 1/1 Installing : libgcc-4.8.5-39.el7.x86_64 1/176 Running scriptlet: libgcc-4.8.5-39.el7.x86_64 1/176 Installing : centos-release-7-8.2003.0.el7.centos.x86_64 2/176 Installing : setup-2.8.71-11.el7.noarch 3/176 warning: /etc/hosts created as /etc/hosts.rpmnew Running scriptlet: setup-2.8.71-11.el7.noarch 3/176 Installing : filesystem-3.2-25.el7.x86_64 4/176 Installing : python-srpm-macros-3-32.el7.noarch 5/176 Installing : python-rpm-macros-3-32.el7.noarch 6/176 Installing : basesystem-10.0-7.el7.centos.noarch 7/176 Installing : tzdata-2020a-1.el7.noarch 8/176 Installing : kernel-headers-3.10.0-1127.19.1.el7.x86_64 9/176 Installing : python2-rpm-macros-3-32.el7.noarch 10/176 Installing : perl-srpm-macros-1-8.el7.noarch 11/176 Installing : ncurses-base-5.9-14.20130511.el7_4.noarch 12/176 Installing : nss-softokn-freebl-3.44.0-8.el7_7.x86_64 13/176 Installing : glibc-common-2.17-307.el7.1.x86_64 14/176 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elfutils-libelf-0.176-4.el7.x86_64 21/176 Verifying : elfutils-libs-0.176-4.el7.x86_64 22/176 Verifying : expat-2.1.0-11.el7.x86_64 23/176 Verifying : file-5.11-36.el7.x86_64 24/176 Verifying : file-libs-5.11-36.el7.x86_64 25/176 Verifying : filesystem-3.2-25.el7.x86_64 26/176 Verifying : findutils-1:4.5.11-6.el7.x86_64 27/176 Verifying : gawk-4.0.2-4.el7_3.1.x86_64 28/176 Verifying : gcc-4.8.5-39.el7.x86_64 29/176 Verifying : gcc-c++-4.8.5-39.el7.x86_64 30/176 Verifying : gdb-7.6.1-119.el7.x86_64 31/176 Verifying : gdbm-1.10-8.el7.x86_64 32/176 Verifying : glib2-2.56.1-5.el7.x86_64 33/176 Verifying : glibc-2.17-307.el7.1.x86_64 34/176 Verifying : glibc-common-2.17-307.el7.1.x86_64 35/176 Verifying : glibc-devel-2.17-307.el7.1.x86_64 36/176 Verifying : glibc-headers-2.17-307.el7.1.x86_64 37/176 Verifying : gmp-1:6.0.0-15.el7.x86_64 38/176 Verifying : gnupg2-2.0.22-5.el7_5.x86_64 39/176 Verifying : grep-2.20-3.el7.x86_64 40/176 Verifying : groff-base-1.22.2-8.el7.x86_64 41/176 Verifying : gzip-1.5-10.el7.x86_64 42/176 Verifying : hardlink-1:1.0-19.el7.x86_64 43/176 Verifying : info-5.1-5.el7.x86_64 44/176 Verifying : json-c-0.11-4.el7_0.x86_64 45/176 Verifying : keyutils-libs-1.5.8-3.el7.x86_64 46/176 Verifying : kmod-20-28.el7.x86_64 47/176 Verifying : kmod-libs-20-28.el7.x86_64 48/176 Verifying : kpartx-0.4.9-131.el7.x86_64 49/176 Verifying : krb5-libs-1.15.1-46.el7.x86_64 50/176 Verifying : libacl-2.2.51-15.el7.x86_64 51/176 Verifying : libassuan-2.1.0-3.el7.x86_64 52/176 Verifying : libattr-2.4.46-13.el7.x86_64 53/176 Verifying : libblkid-2.23.2-63.el7.x86_64 54/176 Verifying : libcap-2.22-11.el7.x86_64 55/176 Verifying : libcap-ng-0.7.5-4.el7.x86_64 56/176 Verifying : libcom_err-1.42.9-17.el7.x86_64 57/176 Verifying : libdb-5.3.21-25.el7.x86_64 58/176 Verifying : libdb-utils-5.3.21-25.el7.x86_64 59/176 Verifying : libffi-3.0.13-19.el7.x86_64 60/176 Verifying : libgcc-4.8.5-39.el7.x86_64 61/176 Verifying : libgcrypt-1.5.3-14.el7.x86_64 62/176 Verifying : libgomp-4.8.5-39.el7.x86_64 63/176 Verifying : libgpg-error-1.12-3.el7.x86_64 64/176 Verifying : libidn-1.28-4.el7.x86_64 65/176 Verifying : libmount-2.23.2-63.el7.x86_64 66/176 Verifying : libmpc-1.0.1-3.el7.x86_64 67/176 Verifying : libpwquality-1.2.3-5.el7.x86_64 68/176 Verifying : libselinux-2.5-15.el7.x86_64 69/176 Verifying : libsemanage-2.5-14.el7.x86_64 70/176 Verifying : libsepol-2.5-10.el7.x86_64 71/176 Verifying : libsmartcols-2.23.2-63.el7.x86_64 72/176 Verifying : libssh2-1.8.0-3.el7.x86_64 73/176 Verifying : libstdc++-4.8.5-39.el7.x86_64 74/176 Verifying : libstdc++-devel-4.8.5-39.el7.x86_64 75/176 Verifying : libtasn1-4.10-1.el7.x86_64 76/176 Verifying : libuser-0.60-9.el7.x86_64 77/176 Verifying : libutempter-1.1.6-4.el7.x86_64 78/176 Verifying : libuuid-2.23.2-63.el7.x86_64 79/176 Verifying : libverto-0.2.5-4.el7.x86_64 80/176 Verifying : libxml2-2.9.1-6.el7.4.x86_64 81/176 Verifying : lua-5.1.4-15.el7.x86_64 82/176 Verifying : lz4-1.7.5-3.el7.x86_64 83/176 Verifying : make-1:3.82-24.el7.x86_64 84/176 Verifying : mpfr-3.1.1-4.el7.x86_64 85/176 Verifying : ncurses-5.9-14.20130511.el7_4.x86_64 86/176 Verifying : ncurses-base-5.9-14.20130511.el7_4.noarch 87/176 Verifying : ncurses-libs-5.9-14.20130511.el7_4.x86_64 88/176 Verifying : nspr-4.21.0-1.el7.x86_64 89/176 Verifying : nss-3.44.0-7.el7_7.x86_64 90/176 Verifying : nss-pem-1.0.3-7.el7.x86_64 91/176 Verifying : nss-softokn-3.44.0-8.el7_7.x86_64 92/176 Verifying : nss-softokn-freebl-3.44.0-8.el7_7.x86_64 93/176 Verifying : nss-sysinit-3.44.0-7.el7_7.x86_64 94/176 Verifying : nss-tools-3.44.0-7.el7_7.x86_64 95/176 Verifying : nss-util-3.44.0-4.el7_7.x86_64 96/176 Verifying : openldap-2.4.44-21.el7_6.x86_64 97/176 Verifying : openssl-libs-1:1.0.2k-19.el7.x86_64 98/176 Verifying : p11-kit-0.23.5-3.el7.x86_64 99/176 Verifying : p11-kit-trust-0.23.5-3.el7.x86_64 100/176 Verifying : pam-1.1.8-23.el7.x86_64 101/176 Verifying : patch-2.7.1-12.el7_7.x86_64 102/176 Verifying : pcre-8.32-17.el7.x86_64 103/176 Verifying : perl-4:5.16.3-295.el7.x86_64 104/176 Verifying : perl-Carp-1.26-244.el7.noarch 105/176 Verifying : perl-Encode-2.51-7.el7.x86_64 106/176 Verifying : perl-Exporter-5.68-3.el7.noarch 107/176 Verifying : perl-File-Path-2.09-2.el7.noarch 108/176 Verifying : perl-File-Temp-0.23.01-3.el7.noarch 109/176 Verifying : perl-Filter-1.49-3.el7.x86_64 110/176 Verifying : perl-Getopt-Long-2.40-3.el7.noarch 111/176 Verifying : perl-HTTP-Tiny-0.033-3.el7.noarch 112/176 Verifying : perl-PathTools-3.40-5.el7.x86_64 113/176 Verifying : perl-Pod-Escapes-1:1.04-295.el7.noarch 114/176 Verifying : perl-Pod-Perldoc-3.20-4.el7.noarch 115/176 Verifying : perl-Pod-Simple-1:3.28-4.el7.noarch 116/176 Verifying : perl-Pod-Usage-1.63-3.el7.noarch 117/176 Verifying : perl-Scalar-List-Utils-1.27-248.el7.x86_64 118/176 Verifying : perl-Socket-2.010-5.el7.x86_64 119/176 Verifying : perl-Storable-2.45-3.el7.x86_64 120/176 Verifying : perl-Text-ParseWords-3.29-4.el7.noarch 121/176 Verifying : perl-Thread-Queue-3.02-2.el7.noarch 122/176 Verifying : perl-Time-HiRes-4:1.9725-3.el7.x86_64 123/176 Verifying : perl-Time-Local-1.2300-2.el7.noarch 124/176 Verifying : perl-constant-1.27-2.el7.noarch 125/176 Verifying : perl-libs-4:5.16.3-295.el7.x86_64 126/176 Verifying : perl-macros-4:5.16.3-295.el7.x86_64 127/176 Verifying : perl-parent-1:0.225-244.el7.noarch 128/176 Verifying : perl-podlators-2.5.1-3.el7.noarch 129/176 Verifying : perl-srpm-macros-1-8.el7.noarch 130/176 Verifying : perl-threads-1.87-4.el7.x86_64 131/176 Verifying : perl-threads-shared-1.43-6.el7.x86_64 132/176 Verifying : pinentry-0.8.1-17.el7.x86_64 133/176 Verifying : pkgconfig-1:0.27.1-4.el7.x86_64 134/176 Verifying : popt-1.13-16.el7.x86_64 135/176 Verifying : procps-ng-3.3.10-27.el7.x86_64 136/176 Verifying : pth-2.0.7-23.el7.x86_64 137/176 Verifying : python-libs-2.7.5-88.el7.x86_64 138/176 Verifying : python-rpm-macros-3-32.el7.noarch 139/176 Verifying : python-srpm-macros-3-32.el7.noarch 140/176 Verifying : python2-rpm-macros-3-32.el7.noarch 141/176 Verifying : qrencode-libs-3.4.1-3.el7.x86_64 142/176 Verifying : readline-6.2-11.el7.x86_64 143/176 Verifying : redhat-rpm-config-9.1.0-88.el7.centos.noarch 144/176 Verifying : rpm-4.11.3-43.el7.x86_64 145/176 Verifying : rpm-build-4.11.3-43.el7.x86_64 146/176 Verifying : rpm-build-libs-4.11.3-43.el7.x86_64 147/176 Verifying : rpm-libs-4.11.3-43.el7.x86_64 148/176 Verifying : sed-4.2.2-6.el7.x86_64 149/176 Verifying : setup-2.8.71-11.el7.noarch 150/176 Verifying : shadow-utils-2:4.6-5.el7.x86_64 151/176 Verifying : shared-mime-info-1.8-5.el7.x86_64 152/176 Verifying : sqlite-3.7.17-8.el7_7.1.x86_64 153/176 Verifying : tar-2:1.26-35.el7.x86_64 154/176 Verifying : unzip-6.0-21.el7.x86_64 155/176 Verifying : ustr-1.0.4-16.el7.x86_64 156/176 Verifying : util-linux-2.23.2-63.el7.x86_64 157/176 Verifying : which-2.20-7.el7.x86_64 158/176 Verifying : xz-5.2.2-1.el7.x86_64 159/176 Verifying : xz-libs-5.2.2-1.el7.x86_64 160/176 Verifying : zip-3.0-11.el7.x86_64 161/176 Verifying : zlib-1.2.7-18.el7.x86_64 162/176 Verifying : binutils-2.27-43.base.el7_8.1.x86_64 163/176 Verifying : ca-certificates-2020.2.41-70.0.el7_8.noarch 164/176 Verifying : curl-7.29.0-57.el7_8.1.x86_64 165/176 Verifying : dbus-1:1.10.24-14.el7_8.x86_64 166/176 Verifying : dbus-libs-1:1.10.24-14.el7_8.x86_64 167/176 Verifying : device-mapper-7:1.02.164-7.el7_8.2.x86_64 168/176 Verifying : device-mapper-libs-7:1.02.164-7.el7_8.2.x86_64 169/176 Verifying : kernel-headers-3.10.0-1127.19.1.el7.x86_64 170/176 Verifying : libcurl-7.29.0-57.el7_8.1.x86_64 171/176 Verifying : systemd-219-73.el7_8.9.x86_64 172/176 Verifying : systemd-libs-219-73.el7_8.9.x86_64 173/176 Verifying : tzdata-2020a-1.el7.noarch 174/176 Verifying : epel-release-7-12.noarch 175/176 Verifying : epel-rpm-macros-7-26.noarch 176/176 Installed: acl-2.2.51-15.el7.x86_64 audit-libs-2.8.5-4.el7.x86_64 basesystem-10.0-7.el7.centos.noarch bash-4.2.46-34.el7.x86_64 binutils-2.27-43.base.el7_8.1.x86_64 bzip2-1.0.6-13.el7.x86_64 bzip2-libs-1.0.6-13.el7.x86_64 ca-certificates-2020.2.41-70.0.el7_8.noarch centos-release-7-8.2003.0.el7.centos.x86_64 chkconfig-1.7.4-1.el7.x86_64 coreutils-8.22-24.el7.x86_64 cpio-2.11-27.el7.x86_64 cpp-4.8.5-39.el7.x86_64 cracklib-2.9.0-11.el7.x86_64 cracklib-dicts-2.9.0-11.el7.x86_64 cryptsetup-libs-2.0.3-6.el7.x86_64 curl-7.29.0-57.el7_8.1.x86_64 cyrus-sasl-lib-2.1.26-23.el7.x86_64 dbus-1:1.10.24-14.el7_8.x86_64 dbus-libs-1:1.10.24-14.el7_8.x86_64 device-mapper-7:1.02.164-7.el7_8.2.x86_64 device-mapper-libs-7:1.02.164-7.el7_8.2.x86_64 diffutils-3.3-5.el7.x86_64 dracut-033-568.el7.x86_64 dwz-0.11-3.el7.x86_64 elfutils-0.176-4.el7.x86_64 elfutils-default-yama-scope-0.176-4.el7.noarch elfutils-libelf-0.176-4.el7.x86_64 elfutils-libs-0.176-4.el7.x86_64 epel-release-7-12.noarch epel-rpm-macros-7-26.noarch expat-2.1.0-11.el7.x86_64 file-5.11-36.el7.x86_64 file-libs-5.11-36.el7.x86_64 filesystem-3.2-25.el7.x86_64 findutils-1:4.5.11-6.el7.x86_64 gawk-4.0.2-4.el7_3.1.x86_64 gcc-4.8.5-39.el7.x86_64 gcc-c++-4.8.5-39.el7.x86_64 gdb-7.6.1-119.el7.x86_64 gdbm-1.10-8.el7.x86_64 glib2-2.56.1-5.el7.x86_64 glibc-2.17-307.el7.1.x86_64 glibc-common-2.17-307.el7.1.x86_64 glibc-devel-2.17-307.el7.1.x86_64 glibc-headers-2.17-307.el7.1.x86_64 gmp-1:6.0.0-15.el7.x86_64 gnupg2-2.0.22-5.el7_5.x86_64 grep-2.20-3.el7.x86_64 groff-base-1.22.2-8.el7.x86_64 gzip-1.5-10.el7.x86_64 hardlink-1:1.0-19.el7.x86_64 info-5.1-5.el7.x86_64 json-c-0.11-4.el7_0.x86_64 kernel-headers-3.10.0-1127.19.1.el7.x86_64 keyutils-libs-1.5.8-3.el7.x86_64 kmod-20-28.el7.x86_64 kmod-libs-20-28.el7.x86_64 kpartx-0.4.9-131.el7.x86_64 krb5-libs-1.15.1-46.el7.x86_64 libacl-2.2.51-15.el7.x86_64 libassuan-2.1.0-3.el7.x86_64 libattr-2.4.46-13.el7.x86_64 libblkid-2.23.2-63.el7.x86_64 libcap-2.22-11.el7.x86_64 libcap-ng-0.7.5-4.el7.x86_64 libcom_err-1.42.9-17.el7.x86_64 libcurl-7.29.0-57.el7_8.1.x86_64 libdb-5.3.21-25.el7.x86_64 libdb-utils-5.3.21-25.el7.x86_64 libffi-3.0.13-19.el7.x86_64 libgcc-4.8.5-39.el7.x86_64 libgcrypt-1.5.3-14.el7.x86_64 libgomp-4.8.5-39.el7.x86_64 libgpg-error-1.12-3.el7.x86_64 libidn-1.28-4.el7.x86_64 libmount-2.23.2-63.el7.x86_64 libmpc-1.0.1-3.el7.x86_64 libpwquality-1.2.3-5.el7.x86_64 libselinux-2.5-15.el7.x86_64 libsemanage-2.5-14.el7.x86_64 libsepol-2.5-10.el7.x86_64 libsmartcols-2.23.2-63.el7.x86_64 libssh2-1.8.0-3.el7.x86_64 libstdc++-4.8.5-39.el7.x86_64 libstdc++-devel-4.8.5-39.el7.x86_64 libtasn1-4.10-1.el7.x86_64 libuser-0.60-9.el7.x86_64 libutempter-1.1.6-4.el7.x86_64 libuuid-2.23.2-63.el7.x86_64 libverto-0.2.5-4.el7.x86_64 libxml2-2.9.1-6.el7.4.x86_64 lua-5.1.4-15.el7.x86_64 lz4-1.7.5-3.el7.x86_64 make-1:3.82-24.el7.x86_64 mpfr-3.1.1-4.el7.x86_64 ncurses-5.9-14.20130511.el7_4.x86_64 ncurses-base-5.9-14.20130511.el7_4.noarch ncurses-libs-5.9-14.20130511.el7_4.x86_64 nspr-4.21.0-1.el7.x86_64 nss-3.44.0-7.el7_7.x86_64 nss-pem-1.0.3-7.el7.x86_64 nss-softokn-3.44.0-8.el7_7.x86_64 nss-softokn-freebl-3.44.0-8.el7_7.x86_64 nss-sysinit-3.44.0-7.el7_7.x86_64 nss-tools-3.44.0-7.el7_7.x86_64 nss-util-3.44.0-4.el7_7.x86_64 openldap-2.4.44-21.el7_6.x86_64 openssl-libs-1:1.0.2k-19.el7.x86_64 p11-kit-0.23.5-3.el7.x86_64 p11-kit-trust-0.23.5-3.el7.x86_64 pam-1.1.8-23.el7.x86_64 patch-2.7.1-12.el7_7.x86_64 pcre-8.32-17.el7.x86_64 perl-4:5.16.3-295.el7.x86_64 perl-Carp-1.26-244.el7.noarch perl-Encode-2.51-7.el7.x86_64 perl-Exporter-5.68-3.el7.noarch perl-File-Path-2.09-2.el7.noarch perl-File-Temp-0.23.01-3.el7.noarch perl-Filter-1.49-3.el7.x86_64 perl-Getopt-Long-2.40-3.el7.noarch perl-HTTP-Tiny-0.033-3.el7.noarch perl-PathTools-3.40-5.el7.x86_64 perl-Pod-Escapes-1:1.04-295.el7.noarch perl-Pod-Perldoc-3.20-4.el7.noarch perl-Pod-Simple-1:3.28-4.el7.noarch perl-Pod-Usage-1.63-3.el7.noarch perl-Scalar-List-Utils-1.27-248.el7.x86_64 perl-Socket-2.010-5.el7.x86_64 perl-Storable-2.45-3.el7.x86_64 perl-Text-ParseWords-3.29-4.el7.noarch perl-Thread-Queue-3.02-2.el7.noarch perl-Time-HiRes-4:1.9725-3.el7.x86_64 perl-Time-Local-1.2300-2.el7.noarch perl-constant-1.27-2.el7.noarch perl-libs-4:5.16.3-295.el7.x86_64 perl-macros-4:5.16.3-295.el7.x86_64 perl-parent-1:0.225-244.el7.noarch perl-podlators-2.5.1-3.el7.noarch perl-srpm-macros-1-8.el7.noarch perl-threads-1.87-4.el7.x86_64 perl-threads-shared-1.43-6.el7.x86_64 pinentry-0.8.1-17.el7.x86_64 pkgconfig-1:0.27.1-4.el7.x86_64 popt-1.13-16.el7.x86_64 procps-ng-3.3.10-27.el7.x86_64 pth-2.0.7-23.el7.x86_64 python-libs-2.7.5-88.el7.x86_64 python-rpm-macros-3-32.el7.noarch python-srpm-macros-3-32.el7.noarch python2-rpm-macros-3-32.el7.noarch qrencode-libs-3.4.1-3.el7.x86_64 readline-6.2-11.el7.x86_64 redhat-rpm-config-9.1.0-88.el7.centos.noarch rpm-4.11.3-43.el7.x86_64 rpm-build-4.11.3-43.el7.x86_64 rpm-build-libs-4.11.3-43.el7.x86_64 rpm-libs-4.11.3-43.el7.x86_64 sed-4.2.2-6.el7.x86_64 setup-2.8.71-11.el7.noarch shadow-utils-2:4.6-5.el7.x86_64 shared-mime-info-1.8-5.el7.x86_64 sqlite-3.7.17-8.el7_7.1.x86_64 systemd-219-73.el7_8.9.x86_64 systemd-libs-219-73.el7_8.9.x86_64 tar-2:1.26-35.el7.x86_64 tzdata-2020a-1.el7.noarch unzip-6.0-21.el7.x86_64 ustr-1.0.4-16.el7.x86_64 util-linux-2.23.2-63.el7.x86_64 which-2.20-7.el7.x86_64 xz-5.2.2-1.el7.x86_64 xz-libs-5.2.2-1.el7.x86_64 zip-3.0-11.el7.x86_64 zlib-1.2.7-18.el7.x86_64 Complete! Finish: dnf install Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: perl-Pod-Simple-3.28-4.el7.noarch info-5.1-5.el7.x86_64 krb5-libs-1.15.1-46.el7.x86_64 libutempter-1.1.6-4.el7.x86_64 pth-2.0.7-23.el7.x86_64 bzip2-1.0.6-13.el7.x86_64 file-libs-5.11-36.el7.x86_64 gdb-7.6.1-119.el7.x86_64 libuuid-2.23.2-63.el7.x86_64 systemd-libs-219-73.el7_8.9.x86_64 audit-libs-2.8.5-4.el7.x86_64 groff-base-1.22.2-8.el7.x86_64 libcap-2.22-11.el7.x86_64 libmpc-1.0.1-3.el7.x86_64 util-linux-2.23.2-63.el7.x86_64 libgomp-4.8.5-39.el7.x86_64 ncurses-base-5.9-14.20130511.el7_4.noarch elfutils-default-yama-scope-0.176-4.el7.noarch python2-rpm-macros-3-32.el7.noarch perl-Time-HiRes-1.9725-3.el7.x86_64 elfutils-0.176-4.el7.x86_64 ncurses-libs-5.9-14.20130511.el7_4.x86_64 libgpg-error-1.12-3.el7.x86_64 rpm-libs-4.11.3-43.el7.x86_64 dbus-libs-1.10.24-14.el7_8.x86_64 cracklib-2.9.0-11.el7.x86_64 perl-Pod-Usage-1.63-3.el7.noarch python-libs-2.7.5-88.el7.x86_64 python-rpm-macros-3-32.el7.noarch hardlink-1.0-19.el7.x86_64 zip-3.0-11.el7.x86_64 file-5.11-36.el7.x86_64 procps-ng-3.3.10-27.el7.x86_64 perl-5.16.3-295.el7.x86_64 libffi-3.0.13-19.el7.x86_64 shadow-utils-4.6-5.el7.x86_64 dracut-033-568.el7.x86_64 kpartx-0.4.9-131.el7.x86_64 kmod-20-28.el7.x86_64 glib2-2.56.1-5.el7.x86_64 cracklib-dicts-2.9.0-11.el7.x86_64 cyrus-sasl-lib-2.1.26-23.el7.x86_64 xz-libs-5.2.2-1.el7.x86_64 perl-threads-shared-1.43-6.el7.x86_64 shared-mime-info-1.8-5.el7.x86_64 perl-macros-5.16.3-295.el7.x86_64 setup-2.8.71-11.el7.noarch nss-pem-1.0.3-7.el7.x86_64 cpio-2.11-27.el7.x86_64 nss-3.44.0-7.el7_7.x86_64 perl-Storable-2.45-3.el7.x86_64 unzip-6.0-21.el7.x86_64 lua-5.1.4-15.el7.x86_64 perl-libs-5.16.3-295.el7.x86_64 perl-Thread-Queue-3.02-2.el7.noarch libidn-1.28-4.el7.x86_64 acl-2.2.51-15.el7.x86_64 make-3.82-24.el7.x86_64 keyutils-libs-1.5.8-3.el7.x86_64 gnupg2-2.0.22-5.el7_5.x86_64 openssl-libs-1.0.2k-19.el7.x86_64 tar-1.26-35.el7.x86_64 libselinux-2.5-15.el7.x86_64 glibc-headers-2.17-307.el7.1.x86_64 perl-Carp-1.26-244.el7.noarch basesystem-10.0-7.el7.centos.noarch libsemanage-2.5-14.el7.x86_64 perl-Exporter-5.68-3.el7.noarch pcre-8.32-17.el7.x86_64 libcom_err-1.42.9-17.el7.x86_64 nss-sysinit-3.44.0-7.el7_7.x86_64 bash-4.2.46-34.el7.x86_64 perl-File-Path-2.09-2.el7.noarch perl-Text-ParseWords-3.29-4.el7.noarch libgcc-4.8.5-39.el7.x86_64 glibc-devel-2.17-307.el7.1.x86_64 gmp-6.0.0-15.el7.x86_64 filesystem-3.2-25.el7.x86_64 libdb-utils-5.3.21-25.el7.x86_64 libcurl-7.29.0-57.el7_8.1.x86_64 cpp-4.8.5-39.el7.x86_64 epel-rpm-macros-7-26.noarch rpm-4.11.3-43.el7.x86_64 perl-srpm-macros-1-8.el7.noarch perl-File-Temp-0.23.01-3.el7.noarch nss-tools-3.44.0-7.el7_7.x86_64 grep-2.20-3.el7.x86_64 coreutils-8.22-24.el7.x86_64 gcc-c++-4.8.5-39.el7.x86_64 libmount-2.23.2-63.el7.x86_64 perl-Pod-Escapes-1.04-295.el7.noarch libattr-2.4.46-13.el7.x86_64 elfutils-libs-0.176-4.el7.x86_64 pam-1.1.8-23.el7.x86_64 gcc-4.8.5-39.el7.x86_64 glibc-common-2.17-307.el7.1.x86_64 json-c-0.11-4.el7_0.x86_64 libacl-2.2.51-15.el7.x86_64 diffutils-3.3-5.el7.x86_64 device-mapper-libs-1.02.164-7.el7_8.2.x86_64 gpg-pubkey-352c64e5-52ae6884 gpg-pubkey-f4a80eb5-53a7ff4b nss-softokn-freebl-3.44.0-8.el7_7.x86_64 libtasn1-4.10-1.el7.x86_64 libassuan-2.1.0-3.el7.x86_64 nss-util-3.44.0-4.el7_7.x86_64 ncurses-5.9-14.20130511.el7_4.x86_64 ca-certificates-2020.2.41-70.0.el7_8.noarch bzip2-libs-1.0.6-13.el7.x86_64 python-srpm-macros-3-32.el7.noarch findutils-4.5.11-6.el7.x86_64 ustr-1.0.4-16.el7.x86_64 perl-Filter-1.49-3.el7.x86_64 perl-HTTP-Tiny-0.033-3.el7.noarch openldap-2.4.44-21.el7_6.x86_64 perl-Socket-2.010-5.el7.x86_64 gdbm-1.10-8.el7.x86_64 perl-threads-1.87-4.el7.x86_64 tzdata-2020a-1.el7.noarch centos-release-7-8.2003.0.el7.centos.x86_64 libsmartcols-2.23.2-63.el7.x86_64 sed-4.2.2-6.el7.x86_64 p11-kit-trust-0.23.5-3.el7.x86_64 libcap-ng-0.7.5-4.el7.x86_64 rpm-build-4.11.3-43.el7.x86_64 gzip-1.5-10.el7.x86_64 rpm-build-libs-4.11.3-43.el7.x86_64 chkconfig-1.7.4-1.el7.x86_64 p11-kit-0.23.5-3.el7.x86_64 perl-Getopt-Long-2.40-3.el7.noarch mpfr-3.1.1-4.el7.x86_64 elfutils-libelf-0.176-4.el7.x86_64 perl-Pod-Perldoc-3.20-4.el7.noarch cryptsetup-libs-2.0.3-6.el7.x86_64 readline-6.2-11.el7.x86_64 redhat-rpm-config-9.1.0-88.el7.centos.noarch nspr-4.21.0-1.el7.x86_64 perl-Time-Local-1.2300-2.el7.noarch nss-softokn-3.44.0-8.el7_7.x86_64 qrencode-libs-3.4.1-3.el7.x86_64 systemd-219-73.el7_8.9.x86_64 libuser-0.60-9.el7.x86_64 libdb-5.3.21-25.el7.x86_64 libstdc++-4.8.5-39.el7.x86_64 perl-podlators-2.5.1-3.el7.noarch libstdc++-devel-4.8.5-39.el7.x86_64 libblkid-2.23.2-63.el7.x86_64 sqlite-3.7.17-8.el7_7.1.x86_64 gawk-4.0.2-4.el7_3.1.x86_64 kernel-headers-3.10.0-1127.19.1.el7.x86_64 dbus-1.10.24-14.el7_8.x86_64 perl-parent-0.225-244.el7.noarch libxml2-2.9.1-6.el7.4.x86_64 epel-release-7-12.noarch glibc-2.17-307.el7.1.x86_64 libgcrypt-1.5.3-14.el7.x86_64 popt-1.13-16.el7.x86_64 perl-constant-1.27-2.el7.noarch libverto-0.2.5-4.el7.x86_64 patch-2.7.1-12.el7_7.x86_64 curl-7.29.0-57.el7_8.1.x86_64 lz4-1.7.5-3.el7.x86_64 device-mapper-1.02.164-7.el7_8.2.x86_64 dwz-0.11-3.el7.x86_64 binutils-2.27-43.base.el7_8.1.x86_64 which-2.20-7.el7.x86_64 libpwquality-1.2.3-5.el7.x86_64 zlib-1.2.7-18.el7.x86_64 pkgconfig-0.27.1-4.el7.x86_64 pinentry-0.8.1-17.el7.x86_64 libssh2-1.8.0-3.el7.x86_64 perl-Encode-2.51-7.el7.x86_64 perl-Scalar-List-Utils-1.27-248.el7.x86_64 xz-5.2.2-1.el7.x86_64 libsepol-2.5-10.el7.x86_64 perl-PathTools-3.40-5.el7.x86_64 kmod-libs-20-28.el7.x86_64 expat-2.1.0-11.el7.x86_64 Start: buildsrpm Start: rpmbuild -bs Building target platforms: x86_64 Building for target x86_64 Wrote: /builddir/build/SRPMS/h5py-2.10.0-4.el7.src.rpm Finish: rpmbuild -bs INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/epel-7-x86_64-1600863672.543215/root/var/log/dnf.rpm.log /var/lib/mock/epel-7-x86_64-1600863672.543215/root/var/log/dnf.librepo.log /var/lib/mock/epel-7-x86_64-1600863672.543215/root/var/log/dnf.log Finish: buildsrpm INFO: Done(/tmp/copr-rpmbuild-18fc0t1r/h5py.spec) Config(child) 1 minutes 6 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running (timeout=108000): unbuffer mock --rebuild /var/lib/copr-rpmbuild/results/h5py-2.10.0-4.el7.src.rpm --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1600863739.909334 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 2.6 starting (python version = 3.8.5)... WARNING: Not using '/usr/bin/yum', it is symlink to '/usr/bin/dnf-3' INFO: Using 'dnf' instead of 'yum' Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/results/h5py-2.10.0-4.el7.src.rpm) Config(epel-7-x86_64) Start: clean chroot Finish: clean chroot Start: chroot init INFO: mounting tmpfs at /var/lib/mock/epel-7-x86_64-1600863739.909334/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin Mock Version: 2.6 INFO: Mock Version: 2.6 Start: dnf update No matches found for the following disable plugin patterns: local, spacewalk Copr repository 72 kB/s | 3.3 kB 00:00 BaseOS 24 kB/s | 3.6 kB 00:00 updates 50 B/s | 2.9 kB 01:00 epel 33 kB/s | 4.7 kB 00:00 extras 104 kB/s | 2.9 kB 00:00 sclo 16 kB/s | 3.0 kB 00:00 sclo-rh 19 kB/s | 3.0 kB 00:00 Dependencies resolved. Nothing to do. Complete! Finish: dnf update Finish: chroot init Start: build phase for h5py-2.10.0-4.el7.src.rpm Start: build setup for h5py-2.10.0-4.el7.src.rpm Building target platforms: x86_64 Building for target x86_64 Wrote: /builddir/build/SRPMS/h5py-2.10.0-4.el7.src.rpm No matches found for the following disable plugin patterns: local, spacewalk Copr repository 60 kB/s | 3.3 kB 00:00 Copr repository 782 kB/s | 43 kB 00:00 BaseOS 28 kB/s | 3.6 kB 00:00 updates 15 kB/s | 2.9 kB 00:00 epel 39 kB/s | 4.7 kB 00:00 extras 45 kB/s | 2.9 kB 00:00 sclo 42 kB/s | 3.0 kB 00:00 sclo-rh 18 kB/s | 3.0 kB 00:00 Dependencies resolved. ================================================================================ Package Arch Version Repo Size ================================================================================ Installing: devtoolset-8  x86_64 8.1-1.el7 sclo-rh 5.4 k devtoolset-8-gcc  x86_64 8.3.1-3.2.el7 sclo-rh 30 M hdf5-devel  x86_64 1.8.12-11.el7 epel 642 k hdf5-openmpi-devel  x86_64 1.8.12-11.el7 epel 408 k liblzf-devel  x86_64 3.6-7.el7 epel 8.3 k mpi4py-openmpi  x86_64 1.3.1-2.el7 epel 303 k openmpi-devel  x86_64 1.10.7-5.el7 base 4.7 M python3-Cython  x86_64 0.29.14-2.el7 copr_base 4.5 M python3-devel  x86_64 3.6.8-13.el7 base 215 k python3-numpy  x86_64 1:1.18.5-1.el7 copr_base 9.8 M python36-pkgconfig  noarch 1.1.0-8.el7 epel 12 k python36-six  noarch 1.14.0-2.el7 epel 34 k Installing dependencies: audit-libs-python  x86_64 2.8.5-4.el7 base 76 k avahi-libs  x86_64 0.6.31-20.el7 base 62 k boost-date-time  x86_64 1.53.0-28.el7 base 52 k boost-system  x86_64 1.53.0-28.el7 base 40 k boost-thread  x86_64 1.53.0-28.el7 base 58 k checkpolicy  x86_64 2.5-8.el7 base 295 k devtoolset-8-binutils  x86_64 2.30-55.el7.2 sclo-rh 5.5 M devtoolset-8-dwz  x86_64 0.12-1.1.el7 sclo-rh 98 k devtoolset-8-dyninst  x86_64 9.3.2-6.el7 sclo-rh 3.6 M devtoolset-8-elfutils  x86_64 0.176-1.el7 sclo-rh 431 k devtoolset-8-elfutils-libelf  x86_64 0.176-1.el7 sclo-rh 202 k devtoolset-8-elfutils-libs  x86_64 0.176-1.el7 sclo-rh 311 k devtoolset-8-gcc-c++  x86_64 8.3.1-3.2.el7 sclo-rh 12 M devtoolset-8-gcc-gfortran  x86_64 8.3.1-3.2.el7 sclo-rh 12 M devtoolset-8-gdb  x86_64 8.2-3.el7 sclo-rh 3.4 M devtoolset-8-libquadmath-devel x86_64 8.3.1-3.2.el7 sclo-rh 155 k devtoolset-8-libstdc++-devel  x86_64 8.3.1-3.2.el7 sclo-rh 2.7 M devtoolset-8-ltrace  x86_64 0.7.91-1.el7 sclo-rh 148 k devtoolset-8-make  x86_64 1:4.2.1-4.el7 sclo-rh 485 k devtoolset-8-memstomp  x86_64 0.1.5-5.el7 sclo-rh 442 k devtoolset-8-oprofile  x86_64 1.3.0-2.el7 sclo-rh 1.8 M devtoolset-8-perftools  x86_64 8.1-1.el7 sclo-rh 2.8 k devtoolset-8-runtime  x86_64 8.1-1.el7 sclo-rh 20 k devtoolset-8-strace  x86_64 4.24-4.el7 sclo-rh 1.0 M devtoolset-8-systemtap  x86_64 3.3-2.el7 sclo-rh 144 k devtoolset-8-systemtap-client  x86_64 3.3-2.el7 sclo-rh 2.8 M devtoolset-8-systemtap-devel  x86_64 3.3-2.el7 sclo-rh 2.2 M devtoolset-8-systemtap-runtime x86_64 3.3-2.el7 sclo-rh 427 k devtoolset-8-toolchain  x86_64 8.1-1.el7 sclo-rh 3.0 k devtoolset-8-valgrind  x86_64 1:3.14.0-16.el7 sclo-rh 11 M efivar-libs  x86_64 36-12.el7 base 88 k environment-modules  x86_64 3.2.10-10.el7 base 107 k fipscheck  x86_64 1.4.1-6.el7 base 21 k fipscheck-lib  x86_64 1.4.1-6.el7 base 11 k gcc-gfortran  x86_64 4.8.5-39.el7 base 6.7 M hdf5  x86_64 1.8.12-11.el7 epel 1.6 M hdf5-openmpi  x86_64 1.8.12-11.el7 epel 1.6 M hostname  x86_64 3.13-3.el7_7.1 base 17 k hwdata  x86_64 0.252-9.5.el7 base 2.4 M hwloc-libs  x86_64 1.11.8-4.el7 base 1.6 M infinipath-psm  x86_64 3.3-26_g604758e_open.2.el7 base 186 k initscripts  x86_64 9.49.49-1.el7 base 440 k iproute  x86_64 4.11.0-25.el7_7.2 base 803 k iptables  x86_64 1.4.21-34.el7 base 432 k iputils  x86_64 20160308-10.el7 base 148 k kernel-debug-devel  x86_64 3.10.0-1127.19.1.el7 updates 18 M libX11  x86_64 1.6.7-2.el7 base 607 k libX11-common  noarch 1.6.7-2.el7 base 164 k libXau  x86_64 1.0.8-2.1.el7 base 29 k libaec  x86_64 1.0.4-1.el7 epel 34 k libaec-devel  x86_64 1.0.4-1.el7 epel 7.8 k libcgroup  x86_64 0.41-21.el7 base 66 k libedit  x86_64 3.0-12.20121213cvs.el7 base 92 k libfabric  x86_64 1.7.0-1.el7 base 525 k libgfortran  x86_64 4.8.5-39.el7 base 300 k libgfortran5  x86_64 8.3.1-2.1.1.el7 base 796 k libibumad  x86_64 22.4-4.el7_8 updates 24 k libibverbs  x86_64 22.4-4.el7_8 updates 268 k liblzf  x86_64 3.6-7.el7 epel 22 k libmnl  x86_64 1.0.3-7.el7 base 23 k libnetfilter_conntrack  x86_64 1.0.6-1.el7_3 base 55 k libnfnetlink  x86_64 1.0.1-4.el7 base 26 k libnl3  x86_64 3.2.28-4.el7 base 278 k libpsm2  x86_64 11.2.78-1.el7 base 189 k libquadmath  x86_64 4.8.5-39.el7 base 190 k libquadmath-devel  x86_64 4.8.5-39.el7 base 53 k librdmacm  x86_64 22.4-4.el7_8 updates 64 k libselinux-python  x86_64 2.5-15.el7 base 236 k libselinux-utils  x86_64 2.5-15.el7 base 151 k libsemanage-python  x86_64 2.5-14.el7 base 113 k libtirpc  x86_64 0.2.4-0.16.el7 base 89 k libtool-ltdl  x86_64 2.4.2-22.el7_3 base 49 k libxcb  x86_64 1.13-1.el7 base 214 k mokutil  x86_64 15-8.el7 updates 42 k mpi4py-common  noarch 1.3.1-2.el7 epel 11 k numactl-libs  x86_64 2.0.12-5.el7 base 30 k openblas-threads  x86_64 0.3.3-2.el7 epel 4.4 M openmpi  x86_64 1.10.7-5.el7 base 3.1 M opensm-libs  x86_64 3.3.21-3.el7_8 updates 69 k openssh  x86_64 7.4p1-21.el7 base 510 k openssh-clients  x86_64 7.4p1-21.el7 base 655 k pciutils  x86_64 3.5.1-3.el7 base 93 k pciutils-libs  x86_64 3.5.1-3.el7 base 46 k policycoreutils  x86_64 2.5-34.el7 base 917 k policycoreutils-python  x86_64 2.5-34.el7 base 457 k python  x86_64 2.7.5-88.el7 base 96 k python-IPy  noarch 0.75-6.el7 base 32 k python3  x86_64 3.6.8-13.el7 base 69 k python3-libs  x86_64 3.6.8-13.el7 base 7.0 M python3-pip  noarch 9.0.3-7.el7_7 updates 1.8 M python3-rpm-generators  noarch 6-2.el7 base 20 k python3-rpm-macros  noarch 3-32.el7 base 7.7 k python3-setuptools  noarch 39.2.0-10.el7 base 629 k rdma-core  x86_64 22.4-4.el7_8 updates 51 k scl-utils  x86_64 20130529-19.el7 base 24 k setools-libs  x86_64 3.3.8-4.el7 base 620 k sysvinit-tools  x86_64 2.88-14.dsf.el7 base 63 k tcl  x86_64 1:8.5.13-8.el7 base 1.9 M ucx  x86_64 1.5.2-1.el7 base 443 k zlib-devel  x86_64 1.2.7-18.el7 base 50 k Transaction Summary ================================================================================ Install 112 Packages Total download size: 174 M Installed size: 604 M Downloading Packages: (1/112): audit-libs-python-2.8.5-4.el7.x86_64.r 3.8 MB/s | 76 kB 00:00 (2/112): avahi-libs-0.6.31-20.el7.x86_64.rpm 17 MB/s | 62 kB 00:00 (3/112): boost-date-time-1.53.0-28.el7.x86_64.r 14 MB/s | 52 kB 00:00 (4/112): boost-system-1.53.0-28.el7.x86_64.rpm 13 MB/s | 40 kB 00:00 (5/112): boost-thread-1.53.0-28.el7.x86_64.rpm 14 MB/s | 58 kB 00:00 (6/112): checkpolicy-2.5-8.el7.x86_64.rpm 32 MB/s | 295 kB 00:00 (7/112): efivar-libs-36-12.el7.x86_64.rpm 18 MB/s | 88 kB 00:00 (8/112): environment-modules-3.2.10-10.el7.x86_ 27 MB/s | 107 kB 00:00 (9/112): fipscheck-1.4.1-6.el7.x86_64.rpm 8.7 MB/s | 21 kB 00:00 (10/112): fipscheck-lib-1.4.1-6.el7.x86_64.rpm 3.0 MB/s | 11 kB 00:00 (11/112): python3-Cython-0.29.14-2.el7.x86_64.r 51 MB/s | 4.5 MB 00:00 (12/112): hostname-3.13-3.el7_7.1.x86_64.rpm 3.8 MB/s | 17 kB 00:00 (13/112): hwdata-0.252-9.5.el7.x86_64.rpm 51 MB/s | 2.4 MB 00:00 (14/112): python3-numpy-1.18.5-1.el7.x86_64.rpm 53 MB/s | 9.8 MB 00:00 (15/112): infinipath-psm-3.3-26_g604758e_open.2 29 MB/s | 186 kB 00:00 (16/112): initscripts-9.49.49-1.el7.x86_64.rpm 46 MB/s | 440 kB 00:00 (17/112): hwloc-libs-1.11.8-4.el7.x86_64.rpm 25 MB/s | 1.6 MB 00:00 (18/112): iptables-1.4.21-34.el7.x86_64.rpm 57 MB/s | 432 kB 00:00 (19/112): iproute-4.11.0-25.el7_7.2.x86_64.rpm 35 MB/s | 803 kB 00:00 (20/112): iputils-20160308-10.el7.x86_64.rpm 20 MB/s | 148 kB 00:00 (21/112): libX11-common-1.6.7-2.el7.noarch.rpm 44 MB/s | 164 kB 00:00 (22/112): libXau-1.0.8-2.1.el7.x86_64.rpm 13 MB/s | 29 kB 00:00 (23/112): libX11-1.6.7-2.el7.x86_64.rpm 49 MB/s | 607 kB 00:00 (24/112): libcgroup-0.41-21.el7.x86_64.rpm 15 MB/s | 66 kB 00:00 (25/112): libedit-3.0-12.20121213cvs.el7.x86_64 33 MB/s | 92 kB 00:00 (26/112): libfabric-1.7.0-1.el7.x86_64.rpm 63 MB/s | 525 kB 00:00 (27/112): libgfortran-4.8.5-39.el7.x86_64.rpm 32 MB/s | 300 kB 00:00 (28/112): gcc-gfortran-4.8.5-39.el7.x86_64.rpm 32 MB/s | 6.7 MB 00:00 (29/112): libmnl-1.0.3-7.el7.x86_64.rpm 869 kB/s | 23 kB 00:00 (30/112): libnetfilter_conntrack-1.0.6-1.el7_3. 22 MB/s | 55 kB 00:00 (31/112): libnfnetlink-1.0.1-4.el7.x86_64.rpm 9.6 MB/s | 26 kB 00:00 (32/112): libnl3-3.2.28-4.el7.x86_64.rpm 53 MB/s | 278 kB 00:00 (33/112): libpsm2-11.2.78-1.el7.x86_64.rpm 33 MB/s | 189 kB 00:00 (34/112): libgfortran5-8.3.1-2.1.1.el7.x86_64.r 18 MB/s | 796 kB 00:00 (35/112): libquadmath-devel-4.8.5-39.el7.x86_64 9.9 MB/s | 53 kB 00:00 (36/112): libquadmath-4.8.5-39.el7.x86_64.rpm 19 MB/s | 190 kB 00:00 (37/112): libselinux-utils-2.5-15.el7.x86_64.rp 34 MB/s | 151 kB 00:00 (38/112): libselinux-python-2.5-15.el7.x86_64.r 31 MB/s | 236 kB 00:00 (39/112): libsemanage-python-2.5-14.el7.x86_64. 21 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python3-3.6.8-13.el7.x86_64.rpm 10 MB/s | 69 kB 00:00 (55/112): python3-rpm-generators-6-2.el7.noarch 9.6 MB/s | 20 kB 00:00 (56/112): python3-rpm-macros-3-32.el7.noarch.rp 3.1 MB/s | 7.7 kB 00:00 (57/112): openmpi-devel-1.10.7-5.el7.x86_64.rpm 49 MB/s | 4.7 MB 00:00 (58/112): scl-utils-20130529-19.el7.x86_64.rpm 12 MB/s | 24 kB 00:00 (59/112): python3-setuptools-39.2.0-10.el7.noar 22 MB/s | 629 kB 00:00 (60/112): sysvinit-tools-2.88-14.dsf.el7.x86_64 23 MB/s | 63 kB 00:00 (61/112): setools-libs-3.3.8-4.el7.x86_64.rpm 44 MB/s | 620 kB 00:00 (62/112): ucx-1.5.2-1.el7.x86_64.rpm 58 MB/s | 443 kB 00:00 (63/112): zlib-devel-1.2.7-18.el7.x86_64.rpm 27 MB/s | 50 kB 00:00 (64/112): tcl-8.5.13-8.el7.x86_64.rpm 50 MB/s | 1.9 MB 00:00 (65/112): libibumad-22.4-4.el7_8.x86_64.rpm 8.1 MB/s | 24 kB 00:00 (66/112): libibverbs-22.4-4.el7_8.x86_64.rpm 18 MB/s | 268 kB 00:00 (67/112): librdmacm-22.4-4.el7_8.x86_64.rpm 20 MB/s | 64 kB 00:00 (68/112): mokutil-15-8.el7.x86_64.rpm 14 MB/s | 42 kB 00:00 (69/112): opensm-libs-3.3.21-3.el7_8.x86_64.rpm 24 MB/s | 69 kB 00:00 (70/112): python3-libs-3.6.8-13.el7.x86_64.rpm 49 MB/s | 7.0 MB 00:00 (71/112): rdma-core-22.4-4.el7_8.x86_64.rpm 20 MB/s | 51 kB 00:00 (72/112): python3-pip-9.0.3-7.el7_7.noarch.rpm 27 MB/s | 1.8 MB 00:00 (73/112): hdf5-devel-1.8.12-11.el7.x86_64.rpm 47 MB/s | 642 kB 00:00 (74/112): hdf5-1.8.12-11.el7.x86_64.rpm 33 MB/s | 1.6 MB 00:00 (75/112): hdf5-openmpi-devel-1.8.12-11.el7.x86_ 28 MB/s | 408 kB 00:00 (76/112): hdf5-openmpi-1.8.12-11.el7.x86_64.rpm 57 MB/s | 1.6 MB 00:00 (77/112): libaec-1.0.4-1.el7.x86_64.rpm 4.6 MB/s | 34 kB 00:00 (78/112): libaec-devel-1.0.4-1.el7.x86_64.rpm 2.6 MB/s | 7.8 kB 00:00 (79/112): liblzf-3.6-7.el7.x86_64.rpm 5.7 MB/s | 22 kB 00:00 (80/112): liblzf-devel-3.6-7.el7.x86_64.rpm 1.5 MB/s | 8.3 kB 00:00 (81/112): mpi4py-common-1.3.1-2.el7.noarch.rpm 872 kB/s | 11 kB 00:00 (82/112): mpi4py-openmpi-1.3.1-2.el7.x86_64.rpm 9.6 MB/s | 303 kB 00:00 (83/112): openblas-threads-0.3.3-2.el7.x86_64.r 113 MB/s | 4.4 MB 00:00 (84/112): python36-six-1.14.0-2.el7.noarch.rpm 13 MB/s | 34 kB 00:00 (85/112): devtoolset-8-8.1-1.el7.x86_64.rpm 2.6 MB/s | 5.4 kB 00:00 (86/112): python36-pkgconfig-1.1.0-8.el7.noarch 611 kB/s | 12 kB 00:00 (87/112): devtoolset-8-dwz-0.12-1.1.el7.x86_64. 20 MB/s | 98 kB 00:00 (88/112): devtoolset-8-binutils-2.30-55.el7.2.x 69 MB/s | 5.5 MB 00:00 (89/112): devtoolset-8-dyninst-9.3.2-6.el7.x86_ 44 MB/s | 3.6 MB 00:00 (90/112): kernel-debug-devel-3.10.0-1127.19.1.e 45 MB/s | 18 MB 00:00 (91/112): devtoolset-8-elfutils-libelf-0.176-1. 2.8 MB/s | 202 kB 00:00 (92/112): devtoolset-8-elfutils-0.176-1.el7.x86 4.4 MB/s | 431 kB 00:00 (93/112): devtoolset-8-elfutils-libs-0.176-1.el 30 MB/s | 311 kB 00:00 (94/112): devtoolset-8-gcc-c++-8.3.1-3.2.el7.x8 70 MB/s | 12 MB 00:00 (95/112): devtoolset-8-gcc-gfortran-8.3.1-3.2.e 50 MB/s | 12 MB 00:00 (96/112): devtoolset-8-libquadmath-devel-8.3.1- 30 MB/s | 155 kB 00:00 (97/112): devtoolset-8-gdb-8.2-3.el7.x86_64.rpm 29 MB/s | 3.4 MB 00:00 (98/112): devtoolset-8-ltrace-0.7.91-1.el7.x86_ 24 MB/s | 148 kB 00:00 (99/112): devtoolset-8-libstdc++-devel-8.3.1-3. 49 MB/s | 2.7 MB 00:00 (100/112): devtoolset-8-make-4.2.1-4.el7.x86_64 22 MB/s | 485 kB 00:00 (101/112): devtoolset-8-memstomp-0.1.5-5.el7.x8 39 MB/s | 442 kB 00:00 (102/112): devtoolset-8-perftools-8.1-1.el7.x86 571 kB/s | 2.8 kB 00:00 (103/112): devtoolset-8-runtime-8.1-1.el7.x86_6 9.6 MB/s | 20 kB 00:00 (104/112): devtoolset-8-oprofile-1.3.0-2.el7.x8 60 MB/s | 1.8 MB 00:00 (105/112): devtoolset-8-systemtap-3.3-2.el7.x86 26 MB/s | 144 kB 00:00 (106/112): devtoolset-8-strace-4.24-4.el7.x86_6 38 MB/s | 1.0 MB 00:00 (107/112): devtoolset-8-systemtap-devel-3.3-2.e 57 MB/s | 2.2 MB 00:00 (108/112): devtoolset-8-systemtap-client-3.3-2. 45 MB/s | 2.8 MB 00:00 (109/112): devtoolset-8-systemtap-runtime-3.3-2 21 MB/s | 427 kB 00:00 (110/112): devtoolset-8-toolchain-8.1-1.el7.x86 874 kB/s | 3.0 kB 00:00 (111/112): devtoolset-8-gcc-8.3.1-3.2.el7.x86_6 55 MB/s | 30 MB 00:00 (112/112): devtoolset-8-valgrind-3.14.0-16.el7. 45 MB/s | 11 MB 00:00 -------------------------------------------------------------------------------- Total 95 MB/s | 174 MB 00:01 warning: /var/lib/mock/epel-7-x86_64-1600863739.909334/root/var/cache/dnf/sclo-rh-7d964f0c0d64bc8e/packages/devtoolset-8-8.1-1.el7.x86_64.rpm: Header V4 RSA/SHA1 Signature, key ID f2ee9d55: NOKEY sclo-rh 1.0 MB/s | 1.0 kB 00:00 Importing GPG key 0xF2EE9D55: Userid : "CentOS SoftwareCollections SIG (https://wiki.centos.org/SpecialInterestGroup/SCLo) " Fingerprint: C4DB D535 B1FB BA14 F8BA 64A8 4EB8 4E71 F2EE 9D55 From : /usr/share/distribution-gpg-keys/centos/RPM-GPG-KEY-CentOS-SIG-SCLo Key imported successfully Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Preparing : 1/1 Installing : libquadmath-4.8.5-39.el7.x86_64 1/112 Running scriptlet: libquadmath-4.8.5-39.el7.x86_64 1/112 Installing : python-2.7.5-88.el7.x86_64 2/112 Installing : libgfortran-4.8.5-39.el7.x86_64 3/112 Running scriptlet: libgfortran-4.8.5-39.el7.x86_64 3/112 Installing : libaec-1.0.4-1.el7.x86_64 4/112 Running scriptlet: libaec-1.0.4-1.el7.x86_64 4/112 Installing : numactl-libs-2.0.12-5.el7.x86_64 5/112 Running scriptlet: numactl-libs-2.0.12-5.el7.x86_64 5/112 Installing : libpsm2-11.2.78-1.el7.x86_64 6/112 Running scriptlet: libpsm2-11.2.78-1.el7.x86_64 6/112 Installing : hdf5-1.8.12-11.el7.x86_64 7/112 Running scriptlet: hdf5-1.8.12-11.el7.x86_64 7/112 Installing : libaec-devel-1.0.4-1.el7.x86_64 8/112 Installing : zlib-devel-1.2.7-18.el7.x86_64 9/112 Installing : libnl3-3.2.28-4.el7.x86_64 10/112 Running scriptlet: libnl3-3.2.28-4.el7.x86_64 10/112 Installing : libnfnetlink-1.0.1-4.el7.x86_64 11/112 Running scriptlet: libnfnetlink-1.0.1-4.el7.x86_64 11/112 Installing : libmnl-1.0.3-7.el7.x86_64 12/112 Running scriptlet: libmnl-1.0.3-7.el7.x86_64 12/112 Installing : infinipath-psm-3.3-26_g604758e_open.2.el7.x86_64 13/112 Running scriptlet: infinipath-psm-3.3-26_g604758e_open.2.el7.x86_64 13/112 Installing : boost-system-1.53.0-28.el7.x86_64 14/112 Running scriptlet: boost-system-1.53.0-28.el7.x86_64 14/112 Installing : avahi-libs-0.6.31-20.el7.x86_64 15/112 Running scriptlet: avahi-libs-0.6.31-20.el7.x86_64 15/112 Installing : boost-thread-1.53.0-28.el7.x86_64 16/112 Running scriptlet: boost-thread-1.53.0-28.el7.x86_64 16/112 Installing : libnetfilter_conntrack-1.0.6-1.el7_3.x86_64 17/112 Running scriptlet: libnetfilter_conntrack-1.0.6-1.el7_3.x86_64 17/112 Running scriptlet: iptables-1.4.21-34.el7.x86_64 18/112 Installing : iptables-1.4.21-34.el7.x86_64 18/112 Running scriptlet: iptables-1.4.21-34.el7.x86_64 18/112 Installing : iproute-4.11.0-25.el7_7.2.x86_64 19/112 Installing : openblas-threads-0.3.3-2.el7.x86_64 20/112 Running scriptlet: openblas-threads-0.3.3-2.el7.x86_64 20/112 Installing : audit-libs-python-2.8.5-4.el7.x86_64 21/112 Installing : libselinux-python-2.5-15.el7.x86_64 22/112 Installing : libsemanage-python-2.5-14.el7.x86_64 23/112 Installing : python-IPy-0.75-6.el7.noarch 24/112 Installing : libgfortran5-8.3.1-2.1.1.el7.x86_64 25/112 Running scriptlet: libgfortran5-8.3.1-2.1.1.el7.x86_64 25/112 Installing : libquadmath-devel-4.8.5-39.el7.x86_64 26/112 Installing : gcc-gfortran-4.8.5-39.el7.x86_64 27/112 Running scriptlet: gcc-gfortran-4.8.5-39.el7.x86_64 27/112 Installing : fipscheck-lib-1.4.1-6.el7.x86_64 28/112 Running scriptlet: fipscheck-lib-1.4.1-6.el7.x86_64 28/112 Installing : fipscheck-1.4.1-6.el7.x86_64 29/112 Running scriptlet: openssh-7.4p1-21.el7.x86_64 30/112 Installing : openssh-7.4p1-21.el7.x86_64 30/112 Installing : mpi4py-common-1.3.1-2.el7.noarch 31/112 Installing : liblzf-3.6-7.el7.x86_64 32/112 Running scriptlet: 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: python3-setuptools-39.2.0-10.el7.noarch 43/112 Installing : python3-pip-9.0.3-7.el7_7.noarch 44/112 Installing : python3-3.6.8-13.el7.x86_64 45/112 Installing : python3-libs-3.6.8-13.el7.x86_64 46/112 Installing : python3-rpm-generators-6-2.el7.noarch 47/112 Installing : libselinux-utils-2.5-15.el7.x86_64 48/112 Installing : policycoreutils-2.5-34.el7.x86_64 49/112 Installing : libedit-3.0-12.20121213cvs.el7.x86_64 50/112 Running scriptlet: libedit-3.0-12.20121213cvs.el7.x86_64 50/112 Installing : openssh-clients-7.4p1-21.el7.x86_64 51/112 Running scriptlet: libcgroup-0.41-21.el7.x86_64 52/112 Installing : libcgroup-0.41-21.el7.x86_64 52/112 Running scriptlet: libcgroup-0.41-21.el7.x86_64 52/112 Installing : libXau-1.0.8-2.1.el7.x86_64 53/112 Running scriptlet: libXau-1.0.8-2.1.el7.x86_64 53/112 Installing : libxcb-1.13-1.el7.x86_64 54/112 Running scriptlet: libxcb-1.13-1.el7.x86_64 54/112 Installing : libX11-common-1.6.7-2.el7.noarch 55/112 Installing : libX11-1.6.7-2.el7.x86_64 56/112 Running scriptlet: libX11-1.6.7-2.el7.x86_64 56/112 Installing : environment-modules-3.2.10-10.el7.x86_64 57/112 Installing : iputils-20160308-10.el7.x86_64 58/112 Running scriptlet: iputils-20160308-10.el7.x86_64 58/112 Installing : hwdata-0.252-9.5.el7.x86_64 59/112 Running scriptlet: hwdata-0.252-9.5.el7.x86_64 59/112 Installing : pciutils-3.5.1-3.el7.x86_64 60/112 Installing : hostname-3.13-3.el7_7.1.x86_64 61/112 Running scriptlet: initscripts-9.49.49-1.el7.x86_64 62/112 Installing : initscripts-9.49.49-1.el7.x86_64 62/112 Running scriptlet: initscripts-9.49.49-1.el7.x86_64 62/112 Installing : rdma-core-22.4-4.el7_8.x86_64 63/112 Installing : libibverbs-22.4-4.el7_8.x86_64 64/112 Running scriptlet: libibverbs-22.4-4.el7_8.x86_64 64/112 Installing : librdmacm-22.4-4.el7_8.x86_64 65/112 Running scriptlet: librdmacm-22.4-4.el7_8.x86_64 65/112 Installing : libfabric-1.7.0-1.el7.x86_64 66/112 Running scriptlet: libfabric-1.7.0-1.el7.x86_64 66/112 Installing : ucx-1.5.2-1.el7.x86_64 67/112 Running scriptlet: ucx-1.5.2-1.el7.x86_64 67/112 Installing : libibumad-22.4-4.el7_8.x86_64 68/112 Running scriptlet: libibumad-22.4-4.el7_8.x86_64 68/112 Installing : opensm-libs-3.3.21-3.el7_8.x86_64 69/112 Running scriptlet: opensm-libs-3.3.21-3.el7_8.x86_64 69/112 Installing : openmpi-1.10.7-5.el7.x86_64 70/112 Installing : openmpi-devel-1.10.7-5.el7.x86_64 71/112 Installing : hdf5-openmpi-1.8.12-11.el7.x86_64 72/112 Installing : efivar-libs-36-12.el7.x86_64 73/112 Running scriptlet: efivar-libs-36-12.el7.x86_64 73/112 Installing : mokutil-15-8.el7.x86_64 74/112 Installing : checkpolicy-2.5-8.el7.x86_64 75/112 Installing : policycoreutils-python-2.5-34.el7.x86_64 76/112 Installing : devtoolset-8-runtime-8.1-1.el7.x86_64 77/112 Running scriptlet: devtoolset-8-runtime-8.1-1.el7.x86_64 77/112 ValueError: SELinux policy is not managed or store cannot be accessed. Installing : devtoolset-8-binutils-2.30-55.el7.2.x86_64 78/112 Running scriptlet: devtoolset-8-binutils-2.30-55.el7.2.x86_64 78/112 Installing : devtoolset-8-elfutils-libelf-0.176-1.el7.x86_64 79/112 Running scriptlet: devtoolset-8-elfutils-libelf-0.176-1.el7.x86_64 79/112 Installing : devtoolset-8-elfutils-libs-0.176-1.el7.x86_64 80/112 Running scriptlet: devtoolset-8-elfutils-libs-0.176-1.el7.x86_64 80/112 Installing : devtoolset-8-elfutils-0.176-1.el7.x86_64 81/112 Installing : devtoolset-8-dwz-0.12-1.1.el7.x86_64 82/112 Installing : devtoolset-8-gdb-8.2-3.el7.x86_64 83/112 Installing : devtoolset-8-libstdc++-devel-8.3.1-3.2.el7.x86_6 84/112 Installing : devtoolset-8-ltrace-0.7.91-1.el7.x86_64 85/112 Installing : devtoolset-8-make-1:4.2.1-4.el7.x86_64 86/112 Running scriptlet: devtoolset-8-make-1:4.2.1-4.el7.x86_64 86/112 Installing : devtoolset-8-memstomp-0.1.5-5.el7.x86_64 87/112 Running scriptlet: devtoolset-8-memstomp-0.1.5-5.el7.x86_64 87/112 Running scriptlet: devtoolset-8-oprofile-1.3.0-2.el7.x86_64 88/112 Installing : devtoolset-8-oprofile-1.3.0-2.el7.x86_64 88/112 Installing : devtoolset-8-strace-4.24-4.el7.x86_64 89/112 Installing : devtoolset-8-systemtap-devel-3.3-2.el7.x86_64 90/112 Installing : devtoolset-8-valgrind-1:3.14.0-16.el7.x86_64 91/112 Installing : boost-date-time-1.53.0-28.el7.x86_64 92/112 Running scriptlet: boost-date-time-1.53.0-28.el7.x86_64 92/112 Installing : devtoolset-8-dyninst-9.3.2-6.el7.x86_64 93/112 Running scriptlet: devtoolset-8-systemtap-runtime-3.3-2.el7.x86_64 94/112 Installing : devtoolset-8-systemtap-runtime-3.3-2.el7.x86_64 94/112 Installing : devtoolset-8-systemtap-client-3.3-2.el7.x86_64 95/112 Installing : devtoolset-8-systemtap-3.3-2.el7.x86_64 96/112 Running scriptlet: devtoolset-8-systemtap-3.3-2.el7.x86_64 96/112 Installing : devtoolset-8-perftools-8.1-1.el7.x86_64 97/112 Installing : hdf5-openmpi-devel-1.8.12-11.el7.x86_64 98/112 Installing : mpi4py-openmpi-1.3.1-2.el7.x86_64 99/112 Installing : python3-devel-3.6.8-13.el7.x86_64 100/112 Installing : python3-Cython-0.29.14-2.el7.x86_64 101/112 Installing : python3-numpy-1:1.18.5-1.el7.x86_64 102/112 Installing : python36-pkgconfig-1.1.0-8.el7.noarch 103/112 Installing : python36-six-1.14.0-2.el7.noarch 104/112 Installing : liblzf-devel-3.6-7.el7.x86_64 105/112 Installing : hdf5-devel-1.8.12-11.el7.x86_64 106/112 Installing : devtoolset-8-gcc-8.3.1-3.2.el7.x86_64 107/112 Installing : devtoolset-8-gcc-c++-8.3.1-3.2.el7.x86_64 108/112 Installing : devtoolset-8-libquadmath-devel-8.3.1-3.2.el7.x86 109/112 Installing : devtoolset-8-gcc-gfortran-8.3.1-3.2.el7.x86_64 110/112 Running scriptlet: devtoolset-8-gcc-gfortran-8.3.1-3.2.el7.x86_64 110/112 Installing : devtoolset-8-toolchain-8.1-1.el7.x86_64 111/112 Installing : devtoolset-8-8.1-1.el7.x86_64 112/112 Running scriptlet: iptables-1.4.21-34.el7.x86_64 112/112 Verifying : python3-Cython-0.29.14-2.el7.x86_64 1/112 Verifying : python3-numpy-1:1.18.5-1.el7.x86_64 2/112 Verifying : audit-libs-python-2.8.5-4.el7.x86_64 3/112 Verifying : avahi-libs-0.6.31-20.el7.x86_64 4/112 Verifying : boost-date-time-1.53.0-28.el7.x86_64 5/112 Verifying : boost-system-1.53.0-28.el7.x86_64 6/112 Verifying : boost-thread-1.53.0-28.el7.x86_64 7/112 Verifying : checkpolicy-2.5-8.el7.x86_64 8/112 Verifying : efivar-libs-36-12.el7.x86_64 9/112 Verifying : environment-modules-3.2.10-10.el7.x86_64 10/112 Verifying : fipscheck-1.4.1-6.el7.x86_64 11/112 Verifying : fipscheck-lib-1.4.1-6.el7.x86_64 12/112 Verifying : gcc-gfortran-4.8.5-39.el7.x86_64 13/112 Verifying : hostname-3.13-3.el7_7.1.x86_64 14/112 Verifying : hwdata-0.252-9.5.el7.x86_64 15/112 Verifying : hwloc-libs-1.11.8-4.el7.x86_64 16/112 Verifying : infinipath-psm-3.3-26_g604758e_open.2.el7.x86_64 17/112 Verifying : initscripts-9.49.49-1.el7.x86_64 18/112 Verifying : iproute-4.11.0-25.el7_7.2.x86_64 19/112 Verifying : iptables-1.4.21-34.el7.x86_64 20/112 Verifying : iputils-20160308-10.el7.x86_64 21/112 Verifying : libX11-1.6.7-2.el7.x86_64 22/112 Verifying : libX11-common-1.6.7-2.el7.noarch 23/112 Verifying : libXau-1.0.8-2.1.el7.x86_64 24/112 Verifying : libcgroup-0.41-21.el7.x86_64 25/112 Verifying : libedit-3.0-12.20121213cvs.el7.x86_64 26/112 Verifying : libfabric-1.7.0-1.el7.x86_64 27/112 Verifying : libgfortran-4.8.5-39.el7.x86_64 28/112 Verifying : libgfortran5-8.3.1-2.1.1.el7.x86_64 29/112 Verifying : libmnl-1.0.3-7.el7.x86_64 30/112 Verifying : libnetfilter_conntrack-1.0.6-1.el7_3.x86_64 31/112 Verifying : libnfnetlink-1.0.1-4.el7.x86_64 32/112 Verifying : libnl3-3.2.28-4.el7.x86_64 33/112 Verifying : libpsm2-11.2.78-1.el7.x86_64 34/112 Verifying : libquadmath-4.8.5-39.el7.x86_64 35/112 Verifying : libquadmath-devel-4.8.5-39.el7.x86_64 36/112 Verifying : libselinux-python-2.5-15.el7.x86_64 37/112 Verifying : libselinux-utils-2.5-15.el7.x86_64 38/112 Verifying : libsemanage-python-2.5-14.el7.x86_64 39/112 Verifying : libtirpc-0.2.4-0.16.el7.x86_64 40/112 Verifying : libtool-ltdl-2.4.2-22.el7_3.x86_64 41/112 Verifying : libxcb-1.13-1.el7.x86_64 42/112 Verifying : numactl-libs-2.0.12-5.el7.x86_64 43/112 Verifying : openmpi-1.10.7-5.el7.x86_64 44/112 Verifying : openmpi-devel-1.10.7-5.el7.x86_64 45/112 Verifying : openssh-7.4p1-21.el7.x86_64 46/112 Verifying : openssh-clients-7.4p1-21.el7.x86_64 47/112 Verifying : pciutils-3.5.1-3.el7.x86_64 48/112 Verifying : pciutils-libs-3.5.1-3.el7.x86_64 49/112 Verifying : policycoreutils-2.5-34.el7.x86_64 50/112 Verifying : policycoreutils-python-2.5-34.el7.x86_64 51/112 Verifying : python-2.7.5-88.el7.x86_64 52/112 Verifying : python-IPy-0.75-6.el7.noarch 53/112 Verifying : python3-3.6.8-13.el7.x86_64 54/112 Verifying : python3-devel-3.6.8-13.el7.x86_64 55/112 Verifying : python3-libs-3.6.8-13.el7.x86_64 56/112 Verifying : python3-rpm-generators-6-2.el7.noarch 57/112 Verifying : python3-rpm-macros-3-32.el7.noarch 58/112 Verifying : python3-setuptools-39.2.0-10.el7.noarch 59/112 Verifying : scl-utils-20130529-19.el7.x86_64 60/112 Verifying : setools-libs-3.3.8-4.el7.x86_64 61/112 Verifying : sysvinit-tools-2.88-14.dsf.el7.x86_64 62/112 Verifying : tcl-1:8.5.13-8.el7.x86_64 63/112 Verifying : ucx-1.5.2-1.el7.x86_64 64/112 Verifying : zlib-devel-1.2.7-18.el7.x86_64 65/112 Verifying : kernel-debug-devel-3.10.0-1127.19.1.el7.x86_64 66/112 Verifying : libibumad-22.4-4.el7_8.x86_64 67/112 Verifying : libibverbs-22.4-4.el7_8.x86_64 68/112 Verifying : librdmacm-22.4-4.el7_8.x86_64 69/112 Verifying : mokutil-15-8.el7.x86_64 70/112 Verifying : opensm-libs-3.3.21-3.el7_8.x86_64 71/112 Verifying : python3-pip-9.0.3-7.el7_7.noarch 72/112 Verifying : rdma-core-22.4-4.el7_8.x86_64 73/112 Verifying : hdf5-1.8.12-11.el7.x86_64 74/112 Verifying : hdf5-devel-1.8.12-11.el7.x86_64 75/112 Verifying : hdf5-openmpi-1.8.12-11.el7.x86_64 76/112 Verifying : hdf5-openmpi-devel-1.8.12-11.el7.x86_64 77/112 Verifying : libaec-1.0.4-1.el7.x86_64 78/112 Verifying : libaec-devel-1.0.4-1.el7.x86_64 79/112 Verifying : liblzf-3.6-7.el7.x86_64 80/112 Verifying : liblzf-devel-3.6-7.el7.x86_64 81/112 Verifying : mpi4py-common-1.3.1-2.el7.noarch 82/112 Verifying : mpi4py-openmpi-1.3.1-2.el7.x86_64 83/112 Verifying : openblas-threads-0.3.3-2.el7.x86_64 84/112 Verifying : python36-pkgconfig-1.1.0-8.el7.noarch 85/112 Verifying : python36-six-1.14.0-2.el7.noarch 86/112 Verifying : devtoolset-8-8.1-1.el7.x86_64 87/112 Verifying : devtoolset-8-binutils-2.30-55.el7.2.x86_64 88/112 Verifying : devtoolset-8-dwz-0.12-1.1.el7.x86_64 89/112 Verifying : devtoolset-8-dyninst-9.3.2-6.el7.x86_64 90/112 Verifying : devtoolset-8-elfutils-0.176-1.el7.x86_64 91/112 Verifying : devtoolset-8-elfutils-libelf-0.176-1.el7.x86_64 92/112 Verifying : devtoolset-8-elfutils-libs-0.176-1.el7.x86_64 93/112 Verifying : devtoolset-8-gcc-8.3.1-3.2.el7.x86_64 94/112 Verifying : devtoolset-8-gcc-c++-8.3.1-3.2.el7.x86_64 95/112 Verifying : devtoolset-8-gcc-gfortran-8.3.1-3.2.el7.x86_64 96/112 Verifying : devtoolset-8-gdb-8.2-3.el7.x86_64 97/112 Verifying : devtoolset-8-libquadmath-devel-8.3.1-3.2.el7.x86 98/112 Verifying : devtoolset-8-libstdc++-devel-8.3.1-3.2.el7.x86_6 99/112 Verifying : devtoolset-8-ltrace-0.7.91-1.el7.x86_64 100/112 Verifying : devtoolset-8-make-1:4.2.1-4.el7.x86_64 101/112 Verifying : devtoolset-8-memstomp-0.1.5-5.el7.x86_64 102/112 Verifying : devtoolset-8-oprofile-1.3.0-2.el7.x86_64 103/112 Verifying : devtoolset-8-perftools-8.1-1.el7.x86_64 104/112 Verifying : devtoolset-8-runtime-8.1-1.el7.x86_64 105/112 Verifying : devtoolset-8-strace-4.24-4.el7.x86_64 106/112 Verifying : devtoolset-8-systemtap-3.3-2.el7.x86_64 107/112 Verifying : devtoolset-8-systemtap-client-3.3-2.el7.x86_64 108/112 Verifying : devtoolset-8-systemtap-devel-3.3-2.el7.x86_64 109/112 Verifying : devtoolset-8-systemtap-runtime-3.3-2.el7.x86_64 110/112 Verifying : devtoolset-8-toolchain-8.1-1.el7.x86_64 111/112 Verifying : devtoolset-8-valgrind-1:3.14.0-16.el7.x86_64 112/112 Installed: audit-libs-python-2.8.5-4.el7.x86_64 avahi-libs-0.6.31-20.el7.x86_64 boost-date-time-1.53.0-28.el7.x86_64 boost-system-1.53.0-28.el7.x86_64 boost-thread-1.53.0-28.el7.x86_64 checkpolicy-2.5-8.el7.x86_64 devtoolset-8-8.1-1.el7.x86_64 devtoolset-8-binutils-2.30-55.el7.2.x86_64 devtoolset-8-dwz-0.12-1.1.el7.x86_64 devtoolset-8-dyninst-9.3.2-6.el7.x86_64 devtoolset-8-elfutils-0.176-1.el7.x86_64 devtoolset-8-elfutils-libelf-0.176-1.el7.x86_64 devtoolset-8-elfutils-libs-0.176-1.el7.x86_64 devtoolset-8-gcc-8.3.1-3.2.el7.x86_64 devtoolset-8-gcc-c++-8.3.1-3.2.el7.x86_64 devtoolset-8-gcc-gfortran-8.3.1-3.2.el7.x86_64 devtoolset-8-gdb-8.2-3.el7.x86_64 devtoolset-8-libquadmath-devel-8.3.1-3.2.el7.x86_64 devtoolset-8-libstdc++-devel-8.3.1-3.2.el7.x86_64 devtoolset-8-ltrace-0.7.91-1.el7.x86_64 devtoolset-8-make-1:4.2.1-4.el7.x86_64 devtoolset-8-memstomp-0.1.5-5.el7.x86_64 devtoolset-8-oprofile-1.3.0-2.el7.x86_64 devtoolset-8-perftools-8.1-1.el7.x86_64 devtoolset-8-runtime-8.1-1.el7.x86_64 devtoolset-8-strace-4.24-4.el7.x86_64 devtoolset-8-systemtap-3.3-2.el7.x86_64 devtoolset-8-systemtap-client-3.3-2.el7.x86_64 devtoolset-8-systemtap-devel-3.3-2.el7.x86_64 devtoolset-8-systemtap-runtime-3.3-2.el7.x86_64 devtoolset-8-toolchain-8.1-1.el7.x86_64 devtoolset-8-valgrind-1:3.14.0-16.el7.x86_64 efivar-libs-36-12.el7.x86_64 environment-modules-3.2.10-10.el7.x86_64 fipscheck-1.4.1-6.el7.x86_64 fipscheck-lib-1.4.1-6.el7.x86_64 gcc-gfortran-4.8.5-39.el7.x86_64 hdf5-1.8.12-11.el7.x86_64 hdf5-devel-1.8.12-11.el7.x86_64 hdf5-openmpi-1.8.12-11.el7.x86_64 hdf5-openmpi-devel-1.8.12-11.el7.x86_64 hostname-3.13-3.el7_7.1.x86_64 hwdata-0.252-9.5.el7.x86_64 hwloc-libs-1.11.8-4.el7.x86_64 infinipath-psm-3.3-26_g604758e_open.2.el7.x86_64 initscripts-9.49.49-1.el7.x86_64 iproute-4.11.0-25.el7_7.2.x86_64 iptables-1.4.21-34.el7.x86_64 iputils-20160308-10.el7.x86_64 kernel-debug-devel-3.10.0-1127.19.1.el7.x86_64 libX11-1.6.7-2.el7.x86_64 libX11-common-1.6.7-2.el7.noarch libXau-1.0.8-2.1.el7.x86_64 libaec-1.0.4-1.el7.x86_64 libaec-devel-1.0.4-1.el7.x86_64 libcgroup-0.41-21.el7.x86_64 libedit-3.0-12.20121213cvs.el7.x86_64 libfabric-1.7.0-1.el7.x86_64 libgfortran-4.8.5-39.el7.x86_64 libgfortran5-8.3.1-2.1.1.el7.x86_64 libibumad-22.4-4.el7_8.x86_64 libibverbs-22.4-4.el7_8.x86_64 liblzf-3.6-7.el7.x86_64 liblzf-devel-3.6-7.el7.x86_64 libmnl-1.0.3-7.el7.x86_64 libnetfilter_conntrack-1.0.6-1.el7_3.x86_64 libnfnetlink-1.0.1-4.el7.x86_64 libnl3-3.2.28-4.el7.x86_64 libpsm2-11.2.78-1.el7.x86_64 libquadmath-4.8.5-39.el7.x86_64 libquadmath-devel-4.8.5-39.el7.x86_64 librdmacm-22.4-4.el7_8.x86_64 libselinux-python-2.5-15.el7.x86_64 libselinux-utils-2.5-15.el7.x86_64 libsemanage-python-2.5-14.el7.x86_64 libtirpc-0.2.4-0.16.el7.x86_64 libtool-ltdl-2.4.2-22.el7_3.x86_64 libxcb-1.13-1.el7.x86_64 mokutil-15-8.el7.x86_64 mpi4py-common-1.3.1-2.el7.noarch mpi4py-openmpi-1.3.1-2.el7.x86_64 numactl-libs-2.0.12-5.el7.x86_64 openblas-threads-0.3.3-2.el7.x86_64 openmpi-1.10.7-5.el7.x86_64 openmpi-devel-1.10.7-5.el7.x86_64 opensm-libs-3.3.21-3.el7_8.x86_64 openssh-7.4p1-21.el7.x86_64 openssh-clients-7.4p1-21.el7.x86_64 pciutils-3.5.1-3.el7.x86_64 pciutils-libs-3.5.1-3.el7.x86_64 policycoreutils-2.5-34.el7.x86_64 policycoreutils-python-2.5-34.el7.x86_64 python-2.7.5-88.el7.x86_64 python-IPy-0.75-6.el7.noarch python3-3.6.8-13.el7.x86_64 python3-Cython-0.29.14-2.el7.x86_64 python3-devel-3.6.8-13.el7.x86_64 python3-libs-3.6.8-13.el7.x86_64 python3-numpy-1:1.18.5-1.el7.x86_64 python3-pip-9.0.3-7.el7_7.noarch python3-rpm-generators-6-2.el7.noarch python3-rpm-macros-3-32.el7.noarch python3-setuptools-39.2.0-10.el7.noarch python36-pkgconfig-1.1.0-8.el7.noarch python36-six-1.14.0-2.el7.noarch rdma-core-22.4-4.el7_8.x86_64 scl-utils-20130529-19.el7.x86_64 setools-libs-3.3.8-4.el7.x86_64 sysvinit-tools-2.88-14.dsf.el7.x86_64 tcl-1:8.5.13-8.el7.x86_64 ucx-1.5.2-1.el7.x86_64 zlib-devel-1.2.7-18.el7.x86_64 Complete! Finish: build setup for h5py-2.10.0-4.el7.src.rpm Start: rpmbuild h5py-2.10.0-4.el7.src.rpm Building target platforms: x86_64 Building for target x86_64 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.cu57bZ + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf h5py-2.10.0 + /usr/bin/gzip -dc /builddir/build/SOURCES/h5py-2.10.0.tar.gz + /usr/bin/tar -xf - + STATUS=0 + '[' 0 -ne 0 ']' + cd h5py-2.10.0 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + echo 'Patch #0 (h5py-system-lzf.patch):' Patch #0 (h5py-system-lzf.patch): + /usr/bin/cat /builddir/build/SOURCES/h5py-system-lzf.patch + /usr/bin/patch -p1 -b --suffix .lzf --fuzz=0 patching file lzf/lzf_filter.c patching file setup_build.py Patch #1 (h5py-2.10.x-branch.patch): + echo 'Patch #1 (h5py-2.10.x-branch.patch):' + /usr/bin/patch -p1 -b --suffix .2.10.x --fuzz=0 + /usr/bin/cat /builddir/build/SOURCES/h5py-2.10.x-branch.patch patching file h5py/_hl/dataset.py patching file h5py/h5t.pyx patching file h5py/tests/test_dataset.py + rm -rf lzf/lzf + /usr/bin/python3 api_gen.py + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.m5Ygwa + umask 022 + cd /builddir/build/BUILD + cd h5py-2.10.0 + scl enable devtoolset-8 -- running build running build_py creating build creating build/lib.linux-x86_64-3.6 creating build/lib.linux-x86_64-3.6/h5py copying h5py/version.py -> build/lib.linux-x86_64-3.6/h5py copying h5py/ipy_completer.py -> build/lib.linux-x86_64-3.6/h5py copying h5py/highlevel.py -> build/lib.linux-x86_64-3.6/h5py copying h5py/h5py_warnings.py -> build/lib.linux-x86_64-3.6/h5py copying h5py/__init__.py -> build/lib.linux-x86_64-3.6/h5py creating build/lib.linux-x86_64-3.6/h5py/_hl copying h5py/_hl/dataset.py -> build/lib.linux-x86_64-3.6/h5py/_hl copying h5py/_hl/vds.py -> build/lib.linux-x86_64-3.6/h5py/_hl copying h5py/_hl/selections2.py -> build/lib.linux-x86_64-3.6/h5py/_hl copying h5py/_hl/selections.py -> build/lib.linux-x86_64-3.6/h5py/_hl copying h5py/_hl/group.py -> build/lib.linux-x86_64-3.6/h5py/_hl copying h5py/_hl/filters.py -> build/lib.linux-x86_64-3.6/h5py/_hl copying h5py/_hl/files.py -> build/lib.linux-x86_64-3.6/h5py/_hl copying h5py/_hl/dims.py -> build/lib.linux-x86_64-3.6/h5py/_hl copying h5py/_hl/datatype.py -> build/lib.linux-x86_64-3.6/h5py/_hl copying h5py/_hl/compat.py -> build/lib.linux-x86_64-3.6/h5py/_hl copying h5py/_hl/base.py -> build/lib.linux-x86_64-3.6/h5py/_hl copying h5py/_hl/attrs.py -> build/lib.linux-x86_64-3.6/h5py/_hl copying h5py/_hl/__init__.py -> build/lib.linux-x86_64-3.6/h5py/_hl creating build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_dataset.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_threads.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_slicing.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_selections.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_objects.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_h5t.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_h5pl.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_h5p.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_h5f.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_h5d_direct_chunk.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_h5.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_group.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_filters.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_file_image.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_file2.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_file.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_dtype.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_dims_dimensionproxy.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_dimension_scales.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_deprecation.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_datatype.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_dataset_swmr.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_dataset_getitem.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_completions.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_base.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_attrs_data.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_attrs.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_attribute_create.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/common.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/__init__.py -> build/lib.linux-x86_64-3.6/h5py/tests creating build/lib.linux-x86_64-3.6/h5py/tests/test_vds copying h5py/tests/test_vds/test_virtual_source.py -> build/lib.linux-x86_64-3.6/h5py/tests/test_vds copying h5py/tests/test_vds/test_lowlevel_vds.py -> build/lib.linux-x86_64-3.6/h5py/tests/test_vds copying h5py/tests/test_vds/test_highlevel_vds.py -> build/lib.linux-x86_64-3.6/h5py/tests/test_vds copying h5py/tests/test_vds/__init__.py -> build/lib.linux-x86_64-3.6/h5py/tests/test_vds running build_ext warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/h5fd.pxd:18:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/h5fd.pxd:19:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/h5fd.pxd:20:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/h5fd.pxd:21:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/h5fd.pxd:22:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/h5fd.pxd:23:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/h5fd.pxd:24:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/h5fd.pxd:25:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/h5fd.pxd:26:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/h5fd.pxd:31:8: 'H5FD_CORE' redeclared warning: h5py/h5fd.pxd:32:8: 'H5FD_FAMILY' redeclared warning: h5py/h5fd.pxd:34:8: 'H5FD_LOG' redeclared warning: h5py/h5fd.pxd:35:8: 'H5FD_MPIO' redeclared warning: h5py/h5fd.pxd:37:8: 'H5FD_MULTI' redeclared warning: h5py/h5fd.pxd:38:8: 'H5FD_SEC2' redeclared warning: h5py/h5fd.pxd:39:8: 'H5FD_STDIO' redeclared warning: h5py/h5fd.pxd:44:6: 'H5FD_LOG_LOC_READ' redeclared warning: h5py/h5fd.pxd:45:6: 'H5FD_LOG_LOC_WRITE' redeclared warning: h5py/h5fd.pxd:46:6: 'H5FD_LOG_LOC_SEEK' redeclared warning: h5py/h5fd.pxd:47:6: 'H5FD_LOG_LOC_IO' redeclared warning: h5py/h5fd.pxd:50:6: 'H5FD_LOG_FILE_READ' redeclared warning: h5py/h5fd.pxd:51:6: 'H5FD_LOG_FILE_WRITE' redeclared warning: h5py/h5fd.pxd:52:6: 'H5FD_LOG_FILE_IO' redeclared warning: h5py/h5fd.pxd:55:6: 'H5FD_LOG_FLAVOR' redeclared warning: h5py/h5fd.pxd:58:6: 'H5FD_LOG_NUM_READ' redeclared warning: h5py/h5fd.pxd:59:6: 'H5FD_LOG_NUM_WRITE' redeclared warning: h5py/h5fd.pxd:60:6: 'H5FD_LOG_NUM_SEEK' redeclared warning: h5py/h5fd.pxd:61:6: 'H5FD_LOG_NUM_IO' redeclared warning: h5py/h5fd.pxd:64:6: 'H5FD_LOG_TIME_OPEN' redeclared warning: h5py/h5fd.pxd:65:6: 'H5FD_LOG_TIME_READ' redeclared warning: h5py/h5fd.pxd:66:6: 'H5FD_LOG_TIME_WRITE' redeclared warning: h5py/h5fd.pxd:67:6: 'H5FD_LOG_TIME_SEEK' redeclared warning: h5py/h5fd.pxd:68:6: 'H5FD_LOG_TIME_CLOSE' redeclared warning: h5py/h5fd.pxd:69:6: 'H5FD_LOG_TIME_IO' redeclared warning: h5py/h5fd.pxd:72:6: 'H5FD_LOG_ALLOC' redeclared warning: h5py/h5fd.pxd:73:6: 'H5FD_LOG_ALL' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared Loading library to get version: libhdf5.so Autodetected HDF5 1.8.12 ******************************************************************************** Summary of the h5py configuration Path to HDF5: None HDF5 Version: '1.8.12' MPI Enabled: False Rebuild Required: True ******************************************************************************** Executing cythonize() [ 1/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/_conv.pyx [ 2/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/_errors.pyx [ 3/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/_objects.pyx [ 4/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/_proxy.pyx [ 5/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/defs.pyx [ 6/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5.pyx [ 7/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5a.pyx [ 8/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5ac.pyx [ 9/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5d.pyx [10/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5ds.pyx [11/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5f.pyx [12/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5fd.pyx [13/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5g.pyx [14/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5i.pyx [15/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5l.pyx [16/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5o.pyx [17/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5p.pyx [18/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5pl.pyx [19/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5r.pyx [20/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5s.pyx [21/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5t.pyx [22/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5z.pyx [23/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/utils.pyx building 'h5py.defs' extension creating build/temp.linux-x86_64-3.6 creating build/temp.linux-x86_64-3.6/builddir creating build/temp.linux-x86_64-3.6/builddir/build creating build/temp.linux-x86_64-3.6/builddir/build/BUILD creating build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0 creating build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py gcc -pthread -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/defs.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/defs.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/defs.c:643: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/defs.c:643: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: '_import_array' defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -g -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/defs.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/defs.cpython-36m-x86_64-linux-gnu.so building 'h5py._errors' extension gcc -pthread -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/_errors.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/_errors.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/_errors.c:643: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ /builddir/build/BUILD/h5py-2.10.0/h5py/_errors.c: In function '__pyx_f_4h5py_7_errors_walk_cb': /builddir/build/BUILD/h5py-2.10.0/h5py/_errors.c:1324:13: warning: assignment discards 'const' qualifier from pointer target type [-Wdiscarded-qualifiers] __pyx_t_3 = (__pyx_v_desc[0]).desc; ^ /builddir/build/BUILD/h5py-2.10.0/h5py/_errors.c: In function '__pyx_f_4h5py_7_errors_set_exception': /builddir/build/BUILD/h5py-2.10.0/h5py/_errors.c:1613:13: warning: assignment discards 'const' qualifier from pointer target type [-Wdiscarded-qualifiers] __pyx_t_8 = __pyx_v_err.err.desc; ^ /builddir/build/BUILD/h5py-2.10.0/h5py/_errors.c:1696:13: warning: assignment discards 'const' qualifier from pointer target type [-Wdiscarded-qualifiers] __pyx_t_8 = __pyx_v_err.err.desc; ^ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/_errors.c:643: At top level: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: '_import_array' defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -g -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/_errors.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/_errors.cpython-36m-x86_64-linux-gnu.so building 'h5py._objects' extension gcc -pthread -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/_objects.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/_objects.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/_objects.c:643: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/_objects.c:643: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: '_import_array' defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -g -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/_objects.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/_objects.cpython-36m-x86_64-linux-gnu.so building 'h5py._proxy' extension gcc -pthread -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/_proxy.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/_proxy.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/_proxy.c:643: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/_proxy.c:643: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: '_import_array' defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -g -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/_proxy.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/_proxy.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5fd' extension gcc -pthread -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5fd.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5fd.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5fd.c:643: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ /builddir/build/BUILD/h5py-2.10.0/h5py/h5fd.c: In function '__pyx_pymod_exec_h5fd': /builddir/build/BUILD/h5py-2.10.0/h5py/h5fd.c:18693:36: warning: assignment to 'haddr_t (*)(const H5FD_t *)' {aka 'long unsigned int (*)(const struct H5FD_t *)'} from incompatible pointer type 'haddr_t (*)(const H5FD_t *, H5FD_mem_t)' {aka 'long unsigned int (*)(const struct H5FD_t *, enum H5F_mem_t)'} [-Wincompatible-pointer-types] __pyx_v_4h5py_4h5fd_info.get_eof = ((haddr_t (*)(H5FD_t const *, H5FD_mem_t))__pyx_f_4h5py_4h5fd_H5FD_fileobj_get_eof); ^ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5fd.c:643: At top level: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: '_import_array' defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -g -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5fd.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5fd.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5z' extension creating build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/lzf gcc -pthread -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5z.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5z.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5z.c:644: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5z.c:644: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: '_import_array' defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/lzf/lzf_filter.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/lzf/lzf_filter.o gcc -pthread -shared -Wl,-z,relro -g -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5z.o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/lzf/lzf_filter.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5z.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5' extension gcc -pthread -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5.c:643: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5.c:643: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: '_import_array' defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -g -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5i' extension gcc -pthread -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5i.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5i.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5i.c:643: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5i.c:643: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: '_import_array' defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -g -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5i.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5i.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5r' extension gcc -pthread -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5r.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5r.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5r.c:643: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5r.c:643: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: '_import_array' defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -g -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5r.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5r.cpython-36m-x86_64-linux-gnu.so building 'h5py.utils' extension gcc -pthread -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/utils.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/utils.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/utils.c:645: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ /builddir/build/BUILD/h5py-2.10.0/h5py/utils.c: In function '__pyx_pymod_exec_utils': /builddir/build/BUILD/h5py-2.10.0/h5py/utils.c:3468:3: warning: returning 'void *' from a function with return type 'int' makes integer from pointer without a cast [-Wint-conversion] import_array(); ^~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -g -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/utils.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/utils.cpython-36m-x86_64-linux-gnu.so building 'h5py._conv' extension gcc -pthread -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/_conv.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/_conv.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/_conv.c:644: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ /builddir/build/BUILD/h5py-2.10.0/h5py/_conv.c: In function '__pyx_pymod_exec__conv': /builddir/build/BUILD/h5py-2.10.0/h5py/_conv.c:8545:3: warning: returning 'void *' from a function with return type 'int' makes integer from pointer without a cast [-Wint-conversion] import_array(); ^~~~~~~~~~~~ At top level: /builddir/build/BUILD/h5py-2.10.0/h5py/_conv.c:1918:18: warning: '__pyx_f_4h5py_5_conv_objectify' defined but not used [-Wunused-function] static PyObject *__pyx_f_4h5py_5_conv_objectify(PyObject *__pyx_v_o) { ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -g -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/_conv.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/_conv.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5t' extension gcc -pthread -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5t.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5t.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5t.c:644: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ In file included from /usr/include/python3.6m/Python.h:97, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5t.c:47: /builddir/build/BUILD/h5py-2.10.0/h5py/h5t.c: In function '__pyx_f_4h5py_3h5t__get_available_ftypes': /usr/include/python3.6m/tupleobject.h:62:73: warning: assignment to 'PyObject *' {aka 'struct _object *'} from incompatible pointer type 'PyTypeObject *' {aka 'struct _typeobject *'} [-Wincompatible-pointer-types] #define PyTuple_SET_ITEM(op, i, v) (((PyTupleObject *)(op))->ob_item[i] = v) ^ /builddir/build/BUILD/h5py-2.10.0/h5py/h5t.c:3824:5: note: in expansion of macro 'PyTuple_SET_ITEM' PyTuple_SET_ITEM(__pyx_t_4, 0, __pyx_v_fdtype->typeobj); ^~~~~~~~~~~~~~~~ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5t.c:644: At top level: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: '_import_array' defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -g -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5t.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5t.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5s' extension gcc -pthread -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5s.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5s.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5s.c:644: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5s.c:644: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: '_import_array' defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -g -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5s.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5s.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5p' extension gcc -pthread -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5p.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5p.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5p.c:644: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ /builddir/build/BUILD/h5py-2.10.0/h5py/h5p.c: In function '__pyx_pymod_exec_h5p': /builddir/build/BUILD/h5py-2.10.0/h5py/h5p.c:23506:3: warning: returning 'void *' from a function with return type 'int' makes integer from pointer without a cast [-Wint-conversion] import_array(); ^~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -g -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5p.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5p.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5d' extension gcc -pthread -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5d.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5d.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5d.c:644: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ /builddir/build/BUILD/h5py-2.10.0/h5py/h5d.c: In function '__pyx_pymod_exec_h5d': /builddir/build/BUILD/h5py-2.10.0/h5py/h5d.c:8171:3: warning: returning 'void *' from a function with return type 'int' makes integer from pointer without a cast [-Wint-conversion] import_array(); ^~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -g -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5d.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5d.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5a' extension gcc -pthread -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5a.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5a.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5a.c:644: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ /builddir/build/BUILD/h5py-2.10.0/h5py/h5a.c: In function '__pyx_pymod_exec_h5a': /builddir/build/BUILD/h5py-2.10.0/h5py/h5a.c:9298:3: warning: returning 'void *' from a function with return type 'int' makes integer from pointer without a cast [-Wint-conversion] import_array(); ^~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -g -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5a.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5a.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5f' extension gcc -pthread -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5f.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5f.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5f.c:644: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5f.c:644: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: '_import_array' defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -g -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5f.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5f.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5g' extension gcc -pthread -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5g.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5g.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5g.c:644: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ /builddir/build/BUILD/h5py-2.10.0/h5py/h5g.c: In function '__pyx_pf_4h5py_3h5g_7GroupID_22__contains__': /builddir/build/BUILD/h5py-2.10.0/h5py/h5g.c:6565:37: warning: variable '__pyx_v_new_handler' set but not used [-Wunused-but-set-variable] __pyx_t_4h5py_7_errors_err_cookie __pyx_v_new_handler; ^~~~~~~~~~~~~~~~~~~ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5g.c:644: At top level: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: '_import_array' defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -g -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5g.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5g.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5l' extension gcc -pthread -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5l.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5l.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5l.c:644: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ /builddir/build/BUILD/h5py-2.10.0/h5py/h5l.c: In function '__pyx_pf_4h5py_3h5l_9LinkProxy_12get_val': /builddir/build/BUILD/h5py-2.10.0/h5py/h5l.c:3974:95: warning: passing argument 4 of '__pyx_f_4h5py_4defs_H5Lunpack_elink_val' from incompatible pointer type [-Wincompatible-pointer-types] __pyx_f_4h5py_4defs_H5Lunpack_elink_val(__pyx_v_buf, __pyx_v_buf_size, (&__pyx_v_wtf), (&__pyx_v_ext_file_name), (&__pyx_v_ext_obj_name)); if (unlikely(PyErr_Occurred())) __PYX_ERR(1, 187, __pyx_L5_error) ~^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/h5py-2.10.0/h5py/h5l.c:3974:95: note: expected 'const char **' but argument is of type 'char **' /builddir/build/BUILD/h5py-2.10.0/h5py/h5l.c:3974:121: warning: passing argument 5 of '__pyx_f_4h5py_4defs_H5Lunpack_elink_val' from incompatible pointer type [-Wincompatible-pointer-types] __pyx_f_4h5py_4defs_H5Lunpack_elink_val(__pyx_v_buf, __pyx_v_buf_size, (&__pyx_v_wtf), (&__pyx_v_ext_file_name), (&__pyx_v_ext_obj_name)); if (unlikely(PyErr_Occurred())) __PYX_ERR(1, 187, __pyx_L5_error) ~^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/h5py-2.10.0/h5py/h5l.c:3974:121: note: expected 'const char **' but argument is of type 'char **' In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5l.c:644: At top level: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: '_import_array' defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -g -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5l.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5l.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5o' extension gcc -pthread -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5o.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5o.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5o.c:644: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5o.c:644: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: '_import_array' defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -g -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5o.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5o.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5ds' extension gcc -pthread -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5ds.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5ds.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5ds.c:644: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5ds.c:644: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: '_import_array' defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -g -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5ds.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5ds.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5ac' extension gcc -pthread -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5ac.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5ac.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5ac.c:643: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5ac.c:643: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: '_import_array' defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -g -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5ac.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5ac.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5pl' extension gcc -pthread -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5pl.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5pl.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5pl.c:644: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5pl.c:644: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: '_import_array' defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -g -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5pl.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5pl.cpython-36m-x86_64-linux-gnu.so warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared running configure Loading library to get version: libhdf5.so Autodetected HDF5 1.8.12 ******************************************************************************** Summary of the h5py configuration Path to HDF5: None HDF5 Version: '1.8.12' MPI Enabled: True Rebuild Required: True ******************************************************************************** running build running build_py creating build creating build/lib.linux-x86_64-3.6 creating build/lib.linux-x86_64-3.6/h5py copying h5py/version.py -> build/lib.linux-x86_64-3.6/h5py copying h5py/ipy_completer.py -> build/lib.linux-x86_64-3.6/h5py copying h5py/highlevel.py -> build/lib.linux-x86_64-3.6/h5py copying h5py/h5py_warnings.py -> build/lib.linux-x86_64-3.6/h5py copying h5py/__init__.py -> build/lib.linux-x86_64-3.6/h5py creating build/lib.linux-x86_64-3.6/h5py/_hl copying h5py/_hl/dataset.py -> build/lib.linux-x86_64-3.6/h5py/_hl copying h5py/_hl/vds.py -> build/lib.linux-x86_64-3.6/h5py/_hl copying h5py/_hl/selections2.py -> build/lib.linux-x86_64-3.6/h5py/_hl copying h5py/_hl/selections.py -> build/lib.linux-x86_64-3.6/h5py/_hl copying h5py/_hl/group.py -> build/lib.linux-x86_64-3.6/h5py/_hl copying h5py/_hl/filters.py -> build/lib.linux-x86_64-3.6/h5py/_hl copying h5py/_hl/files.py -> build/lib.linux-x86_64-3.6/h5py/_hl copying h5py/_hl/dims.py -> build/lib.linux-x86_64-3.6/h5py/_hl copying h5py/_hl/datatype.py -> build/lib.linux-x86_64-3.6/h5py/_hl copying h5py/_hl/compat.py -> build/lib.linux-x86_64-3.6/h5py/_hl copying h5py/_hl/base.py -> build/lib.linux-x86_64-3.6/h5py/_hl copying h5py/_hl/attrs.py -> build/lib.linux-x86_64-3.6/h5py/_hl copying h5py/_hl/__init__.py -> build/lib.linux-x86_64-3.6/h5py/_hl creating build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_dataset.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_threads.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_slicing.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_selections.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_objects.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_h5t.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_h5pl.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_h5p.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_h5f.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_h5d_direct_chunk.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_h5.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_group.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_filters.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_file_image.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_file2.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_file.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_dtype.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_dims_dimensionproxy.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_dimension_scales.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_deprecation.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_datatype.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_dataset_swmr.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_dataset_getitem.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_completions.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_base.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_attrs_data.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_attrs.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_attribute_create.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/common.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/__init__.py -> build/lib.linux-x86_64-3.6/h5py/tests creating build/lib.linux-x86_64-3.6/h5py/tests/test_vds copying h5py/tests/test_vds/test_virtual_source.py -> build/lib.linux-x86_64-3.6/h5py/tests/test_vds copying h5py/tests/test_vds/test_lowlevel_vds.py -> build/lib.linux-x86_64-3.6/h5py/tests/test_vds copying h5py/tests/test_vds/test_highlevel_vds.py -> build/lib.linux-x86_64-3.6/h5py/tests/test_vds copying h5py/tests/test_vds/__init__.py -> build/lib.linux-x86_64-3.6/h5py/tests/test_vds running build_ext warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/h5fd.pxd:18:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/h5fd.pxd:19:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/h5fd.pxd:20:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/h5fd.pxd:21:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/h5fd.pxd:22:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/h5fd.pxd:23:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/h5fd.pxd:24:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/h5fd.pxd:25:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/h5fd.pxd:26:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/h5fd.pxd:31:8: 'H5FD_CORE' redeclared warning: h5py/h5fd.pxd:32:8: 'H5FD_FAMILY' redeclared warning: h5py/h5fd.pxd:34:8: 'H5FD_LOG' redeclared warning: h5py/h5fd.pxd:35:8: 'H5FD_MPIO' redeclared warning: h5py/h5fd.pxd:37:8: 'H5FD_MULTI' redeclared warning: h5py/h5fd.pxd:38:8: 'H5FD_SEC2' redeclared warning: h5py/h5fd.pxd:39:8: 'H5FD_STDIO' redeclared warning: h5py/h5fd.pxd:42:8: 'H5FD_MPIO_COLLECTIVE' redeclared warning: h5py/h5fd.pxd:43:8: 'H5FD_MPIO_INDEPENDENT' redeclared warning: h5py/h5fd.pxd:44:6: 'H5FD_LOG_LOC_READ' redeclared warning: h5py/h5fd.pxd:45:6: 'H5FD_LOG_LOC_WRITE' redeclared warning: h5py/h5fd.pxd:46:6: 'H5FD_LOG_LOC_SEEK' redeclared warning: h5py/h5fd.pxd:47:6: 'H5FD_LOG_LOC_IO' redeclared warning: h5py/h5fd.pxd:50:6: 'H5FD_LOG_FILE_READ' redeclared warning: h5py/h5fd.pxd:51:6: 'H5FD_LOG_FILE_WRITE' redeclared warning: h5py/h5fd.pxd:52:6: 'H5FD_LOG_FILE_IO' redeclared warning: h5py/h5fd.pxd:55:6: 'H5FD_LOG_FLAVOR' redeclared warning: h5py/h5fd.pxd:58:6: 'H5FD_LOG_NUM_READ' redeclared warning: h5py/h5fd.pxd:59:6: 'H5FD_LOG_NUM_WRITE' redeclared warning: h5py/h5fd.pxd:60:6: 'H5FD_LOG_NUM_SEEK' redeclared warning: h5py/h5fd.pxd:61:6: 'H5FD_LOG_NUM_IO' redeclared warning: h5py/h5fd.pxd:64:6: 'H5FD_LOG_TIME_OPEN' redeclared warning: h5py/h5fd.pxd:65:6: 'H5FD_LOG_TIME_READ' redeclared warning: h5py/h5fd.pxd:66:6: 'H5FD_LOG_TIME_WRITE' redeclared warning: h5py/h5fd.pxd:67:6: 'H5FD_LOG_TIME_SEEK' redeclared warning: h5py/h5fd.pxd:68:6: 'H5FD_LOG_TIME_CLOSE' redeclared warning: h5py/h5fd.pxd:69:6: 'H5FD_LOG_TIME_IO' redeclared warning: h5py/h5fd.pxd:72:6: 'H5FD_LOG_ALLOC' redeclared warning: h5py/h5fd.pxd:73:6: 'H5FD_LOG_ALL' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared Loading library to get version: libhdf5.so Autodetected HDF5 1.8.12 ******************************************************************************** Summary of the h5py configuration Path to HDF5: None HDF5 Version: '1.8.12' MPI Enabled: True Rebuild Required: True ******************************************************************************** Executing cythonize() [ 1/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/_conv.pyx [ 2/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/_errors.pyx [ 3/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/_objects.pyx [ 4/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/_proxy.pyx [ 5/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/defs.pyx [ 6/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5.pyx [ 7/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5a.pyx [ 8/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5ac.pyx [ 9/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5d.pyx [10/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5ds.pyx [11/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5f.pyx [12/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5fd.pyx [13/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5g.pyx [14/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5i.pyx [15/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5l.pyx [16/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5o.pyx [17/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5p.pyx [18/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5pl.pyx [19/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5r.pyx [20/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5s.pyx [21/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5t.pyx [22/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5z.pyx [23/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/utils.pyx building 'h5py.defs' extension creating build/temp.linux-x86_64-3.6 creating build/temp.linux-x86_64-3.6/builddir creating build/temp.linux-x86_64-3.6/builddir/build creating build/temp.linux-x86_64-3.6/builddir/build/BUILD creating build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0 creating build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py gcc -pthread -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -I/usr/include/openmpi-x86_64 -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/lib64/python2.7/site-packages/openmpi/mpi4py/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/defs.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/defs.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/defs.c:645: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/defs.c:645: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: '_import_array' defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -g -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -I/usr/include/openmpi-x86_64 build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/defs.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/defs.cpython-36m-x86_64-linux-gnu.so building 'h5py._errors' extension gcc -pthread -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -I/usr/include/openmpi-x86_64 -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/lib64/python2.7/site-packages/openmpi/mpi4py/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/_errors.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/_errors.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/_errors.c:645: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ /builddir/build/BUILD/h5py-2.10.0/h5py/_errors.c: In function '__pyx_f_4h5py_7_errors_walk_cb': /builddir/build/BUILD/h5py-2.10.0/h5py/_errors.c:1636:13: warning: assignment discards 'const' qualifier from pointer target type [-Wdiscarded-qualifiers] __pyx_t_3 = (__pyx_v_desc[0]).desc; ^ /builddir/build/BUILD/h5py-2.10.0/h5py/_errors.c: In function '__pyx_f_4h5py_7_errors_set_exception': /builddir/build/BUILD/h5py-2.10.0/h5py/_errors.c:1925:13: warning: assignment discards 'const' qualifier from pointer target type [-Wdiscarded-qualifiers] __pyx_t_8 = __pyx_v_err.err.desc; ^ /builddir/build/BUILD/h5py-2.10.0/h5py/_errors.c:2008:13: warning: assignment discards 'const' qualifier from pointer target type [-Wdiscarded-qualifiers] __pyx_t_8 = __pyx_v_err.err.desc; ^ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/_errors.c:645: At top level: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: '_import_array' defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -g -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -I/usr/include/openmpi-x86_64 build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/_errors.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/_errors.cpython-36m-x86_64-linux-gnu.so building 'h5py._objects' extension gcc -pthread -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -I/usr/include/openmpi-x86_64 -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/lib64/python2.7/site-packages/openmpi/mpi4py/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/_objects.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/_objects.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/_objects.c:645: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/_objects.c:645: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: '_import_array' defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -g -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -I/usr/include/openmpi-x86_64 build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/_objects.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/_objects.cpython-36m-x86_64-linux-gnu.so building 'h5py._proxy' extension gcc -pthread -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -I/usr/include/openmpi-x86_64 -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/lib64/python2.7/site-packages/openmpi/mpi4py/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/_proxy.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/_proxy.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/_proxy.c:645: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/_proxy.c:645: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: '_import_array' defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -g -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -I/usr/include/openmpi-x86_64 build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/_proxy.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/_proxy.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5fd' extension gcc -pthread -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -I/usr/include/openmpi-x86_64 -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/lib64/python2.7/site-packages/openmpi/mpi4py/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5fd.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5fd.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5fd.c:645: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ /builddir/build/BUILD/h5py-2.10.0/h5py/h5fd.c: In function '__pyx_pymod_exec_h5fd': /builddir/build/BUILD/h5py-2.10.0/h5py/h5fd.c:19031:36: warning: assignment to 'haddr_t (*)(const H5FD_t *)' {aka 'long unsigned int (*)(const struct H5FD_t *)'} from incompatible pointer type 'haddr_t (*)(const H5FD_t *, H5FD_mem_t)' {aka 'long unsigned int (*)(const struct H5FD_t *, enum H5F_mem_t)'} [-Wincompatible-pointer-types] __pyx_v_4h5py_4h5fd_info.get_eof = ((haddr_t (*)(H5FD_t const *, H5FD_mem_t))__pyx_f_4h5py_4h5fd_H5FD_fileobj_get_eof); ^ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5fd.c:645: At top level: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: '_import_array' defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -g -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -I/usr/include/openmpi-x86_64 build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5fd.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5fd.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5z' extension creating build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/lzf gcc -pthread -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -I/usr/include/openmpi-x86_64 -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/lib64/python2.7/site-packages/openmpi/mpi4py/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5z.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5z.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5z.c:646: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5z.c:646: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: '_import_array' defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -I/usr/include/openmpi-x86_64 -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/lib64/python2.7/site-packages/openmpi/mpi4py/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/lzf/lzf_filter.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/lzf/lzf_filter.o gcc -pthread -shared -Wl,-z,relro -g -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -I/usr/include/openmpi-x86_64 build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5z.o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/lzf/lzf_filter.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5z.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5' extension gcc -pthread -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -I/usr/include/openmpi-x86_64 -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/lib64/python2.7/site-packages/openmpi/mpi4py/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5.c:645: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5.c:645: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: '_import_array' defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -g -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -I/usr/include/openmpi-x86_64 build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5i' extension gcc -pthread -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -I/usr/include/openmpi-x86_64 -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/lib64/python2.7/site-packages/openmpi/mpi4py/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5i.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5i.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5i.c:645: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5i.c:645: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: '_import_array' defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -g -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -I/usr/include/openmpi-x86_64 build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5i.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5i.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5r' extension gcc -pthread -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -I/usr/include/openmpi-x86_64 -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/lib64/python2.7/site-packages/openmpi/mpi4py/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5r.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5r.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5r.c:645: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5r.c:645: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: '_import_array' defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -g -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -I/usr/include/openmpi-x86_64 build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5r.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5r.cpython-36m-x86_64-linux-gnu.so building 'h5py.utils' extension gcc -pthread -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -I/usr/include/openmpi-x86_64 -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/lib64/python2.7/site-packages/openmpi/mpi4py/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/utils.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/utils.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/utils.c:647: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ /builddir/build/BUILD/h5py-2.10.0/h5py/utils.c: In function '__pyx_pymod_exec_utils': /builddir/build/BUILD/h5py-2.10.0/h5py/utils.c:3806:3: warning: returning 'void *' from a function with return type 'int' makes integer from pointer without a cast [-Wint-conversion] import_array(); ^~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -g -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -I/usr/include/openmpi-x86_64 build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/utils.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/utils.cpython-36m-x86_64-linux-gnu.so building 'h5py._conv' extension gcc -pthread -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -I/usr/include/openmpi-x86_64 -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/lib64/python2.7/site-packages/openmpi/mpi4py/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/_conv.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/_conv.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/_conv.c:646: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ /builddir/build/BUILD/h5py-2.10.0/h5py/_conv.c: In function '__pyx_pymod_exec__conv': /builddir/build/BUILD/h5py-2.10.0/h5py/_conv.c:8883:3: warning: returning 'void *' from a function with return type 'int' makes integer from pointer without a cast [-Wint-conversion] import_array(); ^~~~~~~~~~~~ At top level: /builddir/build/BUILD/h5py-2.10.0/h5py/_conv.c:2219:18: warning: '__pyx_f_4h5py_5_conv_objectify' defined but not used [-Wunused-function] static PyObject *__pyx_f_4h5py_5_conv_objectify(PyObject *__pyx_v_o) { ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -g -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -I/usr/include/openmpi-x86_64 build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/_conv.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/_conv.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5t' extension gcc -pthread -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -I/usr/include/openmpi-x86_64 -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/lib64/python2.7/site-packages/openmpi/mpi4py/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5t.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5t.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5t.c:646: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ In file included from /usr/include/python3.6m/Python.h:97, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5t.c:48: /builddir/build/BUILD/h5py-2.10.0/h5py/h5t.c: In function '__pyx_f_4h5py_3h5t__get_available_ftypes': /usr/include/python3.6m/tupleobject.h:62:73: warning: assignment to 'PyObject *' {aka 'struct _object *'} from incompatible pointer type 'PyTypeObject *' {aka 'struct _typeobject *'} [-Wincompatible-pointer-types] #define PyTuple_SET_ITEM(op, i, v) (((PyTupleObject *)(op))->ob_item[i] = v) ^ /builddir/build/BUILD/h5py-2.10.0/h5py/h5t.c:4125:5: note: in expansion of macro 'PyTuple_SET_ITEM' PyTuple_SET_ITEM(__pyx_t_4, 0, __pyx_v_fdtype->typeobj); ^~~~~~~~~~~~~~~~ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5t.c:646: At top level: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: '_import_array' defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -g -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -I/usr/include/openmpi-x86_64 build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5t.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5t.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5s' extension gcc -pthread -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -I/usr/include/openmpi-x86_64 -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/lib64/python2.7/site-packages/openmpi/mpi4py/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5s.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5s.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5s.c:646: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5s.c:646: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: '_import_array' defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -g -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -I/usr/include/openmpi-x86_64 build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5s.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5s.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5p' extension gcc -pthread -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -I/usr/include/openmpi-x86_64 -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/lib64/python2.7/site-packages/openmpi/mpi4py/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5p.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5p.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5p.c:646: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ /builddir/build/BUILD/h5py-2.10.0/h5py/h5p.c: In function '__pyx_pymod_exec_h5p': /builddir/build/BUILD/h5py-2.10.0/h5py/h5p.c:24407:3: warning: returning 'void *' from a function with return type 'int' makes integer from pointer without a cast [-Wint-conversion] import_array(); ^~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -g -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -I/usr/include/openmpi-x86_64 build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5p.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5p.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5d' extension gcc -pthread -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -I/usr/include/openmpi-x86_64 -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/lib64/python2.7/site-packages/openmpi/mpi4py/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5d.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5d.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5d.c:646: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ /builddir/build/BUILD/h5py-2.10.0/h5py/h5d.c: In function '__pyx_pymod_exec_h5d': /builddir/build/BUILD/h5py-2.10.0/h5py/h5d.c:8509:3: warning: returning 'void *' from a function with return type 'int' makes integer from pointer without a cast [-Wint-conversion] import_array(); ^~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -g -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -I/usr/include/openmpi-x86_64 build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5d.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5d.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5a' extension gcc -pthread -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -I/usr/include/openmpi-x86_64 -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/lib64/python2.7/site-packages/openmpi/mpi4py/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5a.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5a.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5a.c:646: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ /builddir/build/BUILD/h5py-2.10.0/h5py/h5a.c: In function '__pyx_pymod_exec_h5a': /builddir/build/BUILD/h5py-2.10.0/h5py/h5a.c:9636:3: warning: returning 'void *' from a function with return type 'int' makes integer from pointer without a cast [-Wint-conversion] import_array(); ^~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -g -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -I/usr/include/openmpi-x86_64 build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5a.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5a.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5f' extension gcc -pthread -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -I/usr/include/openmpi-x86_64 -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/lib64/python2.7/site-packages/openmpi/mpi4py/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5f.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5f.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5f.c:646: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5f.c:646: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: '_import_array' defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -g -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -I/usr/include/openmpi-x86_64 build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5f.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5f.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5g' extension gcc -pthread -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -I/usr/include/openmpi-x86_64 -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/lib64/python2.7/site-packages/openmpi/mpi4py/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5g.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5g.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5g.c:646: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ /builddir/build/BUILD/h5py-2.10.0/h5py/h5g.c: In function '__pyx_pf_4h5py_3h5g_7GroupID_22__contains__': /builddir/build/BUILD/h5py-2.10.0/h5py/h5g.c:6866:37: warning: variable '__pyx_v_new_handler' set but not used [-Wunused-but-set-variable] __pyx_t_4h5py_7_errors_err_cookie __pyx_v_new_handler; ^~~~~~~~~~~~~~~~~~~ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5g.c:646: At top level: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: '_import_array' defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -g -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -I/usr/include/openmpi-x86_64 build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5g.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5g.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5l' extension gcc -pthread -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -I/usr/include/openmpi-x86_64 -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/lib64/python2.7/site-packages/openmpi/mpi4py/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5l.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5l.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5l.c:646: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ /builddir/build/BUILD/h5py-2.10.0/h5py/h5l.c: In function '__pyx_pf_4h5py_3h5l_9LinkProxy_12get_val': /builddir/build/BUILD/h5py-2.10.0/h5py/h5l.c:4275:95: warning: passing argument 4 of '__pyx_f_4h5py_4defs_H5Lunpack_elink_val' from incompatible pointer type [-Wincompatible-pointer-types] __pyx_f_4h5py_4defs_H5Lunpack_elink_val(__pyx_v_buf, __pyx_v_buf_size, (&__pyx_v_wtf), (&__pyx_v_ext_file_name), (&__pyx_v_ext_obj_name)); if (unlikely(PyErr_Occurred())) __PYX_ERR(1, 187, __pyx_L5_error) ~^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/h5py-2.10.0/h5py/h5l.c:4275:95: note: expected 'const char **' but argument is of type 'char **' /builddir/build/BUILD/h5py-2.10.0/h5py/h5l.c:4275:121: warning: passing argument 5 of '__pyx_f_4h5py_4defs_H5Lunpack_elink_val' from incompatible pointer type [-Wincompatible-pointer-types] __pyx_f_4h5py_4defs_H5Lunpack_elink_val(__pyx_v_buf, __pyx_v_buf_size, (&__pyx_v_wtf), (&__pyx_v_ext_file_name), (&__pyx_v_ext_obj_name)); if (unlikely(PyErr_Occurred())) __PYX_ERR(1, 187, __pyx_L5_error) ~^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/h5py-2.10.0/h5py/h5l.c:4275:121: note: expected 'const char **' but argument is of type 'char **' In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5l.c:646: At top level: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: '_import_array' defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -g -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -I/usr/include/openmpi-x86_64 build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5l.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5l.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5o' extension gcc -pthread -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -I/usr/include/openmpi-x86_64 -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/lib64/python2.7/site-packages/openmpi/mpi4py/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5o.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5o.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5o.c:646: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5o.c:646: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: '_import_array' defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -g -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -I/usr/include/openmpi-x86_64 build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5o.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5o.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5ds' extension gcc -pthread -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -I/usr/include/openmpi-x86_64 -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/lib64/python2.7/site-packages/openmpi/mpi4py/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5ds.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5ds.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5ds.c:646: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5ds.c:646: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: '_import_array' defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -g -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -I/usr/include/openmpi-x86_64 build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5ds.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5ds.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5ac' extension gcc -pthread -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -I/usr/include/openmpi-x86_64 -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/lib64/python2.7/site-packages/openmpi/mpi4py/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5ac.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5ac.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5ac.c:645: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5ac.c:645: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: '_import_array' defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -g -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -I/usr/include/openmpi-x86_64 build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5ac.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5ac.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5pl' extension gcc -pthread -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -I/usr/include/openmpi-x86_64 -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/lib64/python2.7/site-packages/openmpi/mpi4py/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5pl.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5pl.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5pl.c:646: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5pl.c:646: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: '_import_array' defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -g -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -I/usr/include/openmpi-x86_64 build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5pl.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5pl.cpython-36m-x86_64-linux-gnu.so warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared running configure Loading library to get version: libhdf5.so Autodetected HDF5 1.8.12 ******************************************************************************** Summary of the h5py configuration Path to HDF5: None HDF5 Version: '1.8.12' MPI Enabled: False Rebuild Required: True ******************************************************************************** + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.3viggJ + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64 ++ dirname /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64 + cd h5py-2.10.0 + . /etc/profile.d/modules.sh ++++ /bin/ps -p 366 -ocomm= +++ /bin/basename sh ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ MODULESHOME=/usr/share/Modules +++ export MODULESHOME +++ '[' '' = '' ']' +++ LOADEDMODULES= +++ export LOADEDMODULES +++ '[' /usr/share/Modules/modulefiles:/etc/modulefiles = '' ']' + module load mpi/openmpi-x86_64 ++ /usr/bin/modulecmd sh load mpi/openmpi-x86_64 + eval LD_LIBRARY_PATH=/usr/lib64/openmpi/lib ';export' 'LD_LIBRARY_PATH;LOADEDMODULES=mpi/openmpi-x86_64' ';export' 'LOADEDMODULES;MANPATH=/usr/share/man/openmpi-x86_64:/usr/share/man:/usr/local/share/man' ';export' 'MANPATH;MPI_BIN=/usr/lib64/openmpi/bin' ';export' 'MPI_BIN;MPI_COMPILER=openmpi-x86_64' ';export' 'MPI_COMPILER;MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi-x86_64' ';export' 'MPI_FORTRAN_MOD_DIR;MPI_HOME=/usr/lib64/openmpi' ';export' 'MPI_HOME;MPI_INCLUDE=/usr/include/openmpi-x86_64' ';export' 'MPI_INCLUDE;MPI_LIB=/usr/lib64/openmpi/lib' ';export' 'MPI_LIB;MPI_MAN=/usr/share/man/openmpi-x86_64' ';export' 'MPI_MAN;MPI_PYTHON_SITEARCH=/usr/lib64/python2.7/site-packages/openmpi' ';export' 'MPI_PYTHON_SITEARCH;MPI_SUFFIX=_openmpi' ';export' 'MPI_SUFFIX;MPI_SYSCONFIG=/etc/openmpi-x86_64' ';export' 'MPI_SYSCONFIG;PATH=/usr/lib64/openmpi/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin' ';export' 'PATH;PYTHONPATH=/usr/lib64/python2.7/site-packages/openmpi' ';export' 'PYTHONPATH;_LMFILES_=/etc/modulefiles/mpi/openmpi-x86_64' ';export' '_LMFILES_;' ++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib ++ export LD_LIBRARY_PATH ++ LOADEDMODULES=mpi/openmpi-x86_64 ++ export LOADEDMODULES ++ MANPATH=/usr/share/man/openmpi-x86_64:/usr/share/man:/usr/local/share/man ++ export MANPATH ++ MPI_BIN=/usr/lib64/openmpi/bin ++ export MPI_BIN ++ MPI_COMPILER=openmpi-x86_64 ++ export MPI_COMPILER ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi-x86_64 ++ export MPI_FORTRAN_MOD_DIR ++ MPI_HOME=/usr/lib64/openmpi ++ export MPI_HOME ++ MPI_INCLUDE=/usr/include/openmpi-x86_64 ++ export MPI_INCLUDE ++ MPI_LIB=/usr/lib64/openmpi/lib ++ export MPI_LIB ++ MPI_MAN=/usr/share/man/openmpi-x86_64 ++ export MPI_MAN ++ MPI_PYTHON_SITEARCH=/usr/lib64/python2.7/site-packages/openmpi ++ export MPI_PYTHON_SITEARCH ++ MPI_SUFFIX=_openmpi ++ export MPI_SUFFIX ++ MPI_SYSCONFIG=/etc/openmpi-x86_64 ++ export MPI_SYSCONFIG ++ PATH=/usr/lib64/openmpi/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin ++ export PATH ++ PYTHONPATH=/usr/lib64/python2.7/site-packages/openmpi ++ export PYTHONPATH ++ _LMFILES_=/etc/modulefiles/mpi/openmpi-x86_64 ++ export _LMFILES_ + export 'CFLAGS= -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic' + CFLAGS=' -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic' + mv openmpi build + export 'CFLAGS=-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -I/usr/include/openmpi-x86_64' + CFLAGS='-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -I/usr/include/openmpi-x86_64' + /usr/bin/python3 setup.py configure --mpi running configure Loading library to get version: libhdf5.so Autodetected HDF5 1.8.12 ******************************************************************************** Summary of the h5py configuration Path to HDF5: None HDF5 Version: '1.8.12' MPI Enabled: True Rebuild Required: True ******************************************************************************** + CFLAGS='-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -I/usr/include/openmpi-x86_64' + LDFLAGS='-Wl,-z,relro ' + /usr/bin/python3 setup.py install -O1 --skip-build --root /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64 running install running install_lib creating /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr creating /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64 creating /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6 creating /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages creating /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5pl.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5ac.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5ds.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5o.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5l.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5g.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5f.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5a.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5d.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5p.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5s.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5t.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/_conv.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/utils.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5r.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5i.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5z.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5fd.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/_proxy.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/_objects.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/_errors.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/defs.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py creating /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests creating /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_vds copying build/lib.linux-x86_64-3.6/h5py/tests/test_vds/__init__.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_vds copying build/lib.linux-x86_64-3.6/h5py/tests/test_vds/test_highlevel_vds.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_vds copying build/lib.linux-x86_64-3.6/h5py/tests/test_vds/test_lowlevel_vds.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_vds copying build/lib.linux-x86_64-3.6/h5py/tests/test_vds/test_virtual_source.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_vds copying build/lib.linux-x86_64-3.6/h5py/tests/__init__.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/common.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_attribute_create.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_attrs.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_attrs_data.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_base.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_completions.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_dataset_getitem.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_dataset_swmr.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_datatype.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_deprecation.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_dimension_scales.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_dims_dimensionproxy.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_dtype.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_file.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_file2.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_file_image.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_filters.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_group.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_h5.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_h5d_direct_chunk.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_h5f.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_h5p.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_h5pl.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_h5t.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_objects.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_selections.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_slicing.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_threads.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_dataset.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests creating /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl copying build/lib.linux-x86_64-3.6/h5py/_hl/__init__.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl copying build/lib.linux-x86_64-3.6/h5py/_hl/attrs.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl copying build/lib.linux-x86_64-3.6/h5py/_hl/base.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl copying build/lib.linux-x86_64-3.6/h5py/_hl/compat.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl copying build/lib.linux-x86_64-3.6/h5py/_hl/datatype.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl copying build/lib.linux-x86_64-3.6/h5py/_hl/dims.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl copying build/lib.linux-x86_64-3.6/h5py/_hl/files.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl copying build/lib.linux-x86_64-3.6/h5py/_hl/filters.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl copying build/lib.linux-x86_64-3.6/h5py/_hl/group.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl copying build/lib.linux-x86_64-3.6/h5py/_hl/selections.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl copying build/lib.linux-x86_64-3.6/h5py/_hl/selections2.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl copying build/lib.linux-x86_64-3.6/h5py/_hl/vds.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl copying build/lib.linux-x86_64-3.6/h5py/_hl/dataset.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl copying build/lib.linux-x86_64-3.6/h5py/__init__.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5py_warnings.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/highlevel.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/ipy_completer.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/version.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_vds/__init__.py to __init__.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_vds/test_highlevel_vds.py to test_highlevel_vds.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_vds/test_lowlevel_vds.py to test_lowlevel_vds.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_vds/test_virtual_source.py to test_virtual_source.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/__init__.py to __init__.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/common.py to common.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_attribute_create.py to test_attribute_create.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_attrs.py to test_attrs.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_attrs_data.py to test_attrs_data.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_base.py to test_base.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_completions.py to test_completions.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_dataset_getitem.py to test_dataset_getitem.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_dataset_swmr.py to test_dataset_swmr.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_datatype.py to test_datatype.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_deprecation.py to test_deprecation.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_dimension_scales.py to test_dimension_scales.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_dims_dimensionproxy.py to test_dims_dimensionproxy.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_dtype.py to test_dtype.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_file.py to test_file.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_file2.py to test_file2.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_file_image.py to test_file_image.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_filters.py to test_filters.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_group.py to test_group.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_h5.py to test_h5.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_h5d_direct_chunk.py to test_h5d_direct_chunk.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_h5f.py to test_h5f.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_h5p.py to test_h5p.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_h5pl.py to test_h5pl.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_h5t.py to test_h5t.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_objects.py to test_objects.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_selections.py to test_selections.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_slicing.py to test_slicing.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_threads.py to test_threads.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_dataset.py to test_dataset.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl/__init__.py to __init__.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl/attrs.py to attrs.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl/base.py to base.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl/compat.py to compat.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl/datatype.py to datatype.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl/dims.py to dims.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl/files.py to files.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl/filters.py to filters.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl/group.py to group.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl/selections.py to selections.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl/selections2.py to selections2.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl/vds.py to vds.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl/dataset.py to dataset.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/__init__.py to __init__.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/h5py_warnings.py to h5py_warnings.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/highlevel.py to highlevel.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/ipy_completer.py to ipy_completer.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/version.py to version.cpython-36.pyc writing byte-compilation script '/tmp/tmpi75ackj8.py' /usr/bin/python3 /tmp/tmpi75ackj8.py removing /tmp/tmpi75ackj8.py running install_egg_info running egg_info writing h5py.egg-info/PKG-INFO writing dependency_links to h5py.egg-info/dependency_links.txt writing requirements to h5py.egg-info/requires.txt writing top-level names to h5py.egg-info/top_level.txt reading manifest file 'h5py.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' no previously-included directories found matching 'docs/_build' no previously-included directories found matching 'docs_api/_build' warning: no previously-included files matching '.DS_Store' found under directory '*' warning: no previously-included files found matching 'ci' warning: no previously-included files found matching 'other' warning: no previously-included files found matching '.github' warning: no previously-included files matching '*' found under directory 'ci' warning: no previously-included files matching '*' found under directory 'other' warning: no previously-included files matching '*' found under directory '.github' warning: no previously-included files found matching 'pavement.py' warning: no previously-included files found matching '*.yml' warning: no previously-included files found matching '*.yaml' warning: no previously-included files matching '__pycache__' found under directory '*' warning: no previously-included files matching '*.py[co]' found under directory '*' warning: no previously-included files found matching '.coveragerc' warning: no previously-included files found matching '.mailmap' warning: no previously-included files found matching 'rever.xsh' no previously-included directories found matching 'news' writing manifest file 'h5py.egg-info/SOURCES.txt' Copying h5py.egg-info to /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py-2.10.0-py3.6.egg-info running install_scripts + mkdir -p /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/openmpi + mv /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/ /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py-2.10.0-py3.6.egg-info /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/openmpi + /usr/bin/python3 setup.py configure --reset running configure Loading library to get version: libhdf5.so Autodetected HDF5 1.8.12 ******************************************************************************** Summary of the h5py configuration Path to HDF5: None HDF5 Version: '1.8.12' MPI Enabled: False Rebuild Required: True ******************************************************************************** + mv build openmpi + . /etc/profile.d/modules.sh ++++ /bin/ps -p 366 -ocomm= +++ /bin/basename sh ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ MODULESHOME=/usr/share/Modules +++ export MODULESHOME +++ '[' mpi/openmpi-x86_64 = '' ']' +++ '[' /usr/share/Modules/modulefiles:/etc/modulefiles = '' ']' + module unload mpi/openmpi-x86_64 ++ /usr/bin/modulecmd sh unload mpi/openmpi-x86_64 + eval MANPATH=/usr/share/man:/usr/local/share/man ';export' 'MANPATH;PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin' ';export' 'PATH;unset' 'LD_LIBRARY_PATH;unset' 'LOADEDMODULES;unset' 'MPI_BIN;unset' 'MPI_COMPILER;unset' 'MPI_FORTRAN_MOD_DIR;unset' 'MPI_HOME;unset' 'MPI_INCLUDE;unset' 'MPI_LIB;unset' 'MPI_MAN;unset' 'MPI_PYTHON_SITEARCH;unset' 'MPI_SUFFIX;unset' 'MPI_SYSCONFIG;unset' 'PYTHONPATH;unset' '_LMFILES_;' ++ MANPATH=/usr/share/man:/usr/local/share/man ++ export MANPATH ++ PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin ++ export PATH ++ unset LD_LIBRARY_PATH ++ unset LOADEDMODULES ++ unset MPI_BIN ++ unset MPI_COMPILER ++ unset MPI_FORTRAN_MOD_DIR ++ unset MPI_HOME ++ unset MPI_INCLUDE ++ unset MPI_LIB ++ unset MPI_MAN ++ unset MPI_PYTHON_SITEARCH ++ unset MPI_SUFFIX ++ unset MPI_SYSCONFIG ++ unset PYTHONPATH ++ unset _LMFILES_ + mv serial build + CFLAGS='-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fopenmp -I/usr/include/openmpi-x86_64' + LDFLAGS='-Wl,-z,relro ' + /usr/bin/python3 setup.py install -O1 --skip-build --root /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64 running install running install_lib creating /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5pl.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5ac.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5ds.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5o.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5l.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5g.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5f.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5a.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5d.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5p.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5s.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5t.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/_conv.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/utils.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5r.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5i.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5z.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5fd.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/_proxy.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/_objects.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/_errors.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/defs.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py creating /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests creating /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_vds copying build/lib.linux-x86_64-3.6/h5py/tests/test_vds/__init__.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_vds copying build/lib.linux-x86_64-3.6/h5py/tests/test_vds/test_highlevel_vds.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_vds copying build/lib.linux-x86_64-3.6/h5py/tests/test_vds/test_lowlevel_vds.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_vds copying build/lib.linux-x86_64-3.6/h5py/tests/test_vds/test_virtual_source.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_vds copying build/lib.linux-x86_64-3.6/h5py/tests/__init__.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/common.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_attribute_create.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_attrs.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_attrs_data.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_base.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_completions.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_dataset_getitem.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_dataset_swmr.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_datatype.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_deprecation.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_dimension_scales.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_dims_dimensionproxy.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_dtype.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_file.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_file2.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_file_image.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_filters.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_group.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_h5.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_h5d_direct_chunk.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_h5f.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_h5p.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_h5pl.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_h5t.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_objects.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_selections.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_slicing.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_threads.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_dataset.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests creating /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl copying build/lib.linux-x86_64-3.6/h5py/_hl/__init__.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl copying build/lib.linux-x86_64-3.6/h5py/_hl/attrs.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl copying build/lib.linux-x86_64-3.6/h5py/_hl/base.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl copying build/lib.linux-x86_64-3.6/h5py/_hl/compat.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl copying build/lib.linux-x86_64-3.6/h5py/_hl/datatype.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl copying build/lib.linux-x86_64-3.6/h5py/_hl/dims.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl copying build/lib.linux-x86_64-3.6/h5py/_hl/files.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl copying build/lib.linux-x86_64-3.6/h5py/_hl/filters.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl copying build/lib.linux-x86_64-3.6/h5py/_hl/group.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl copying build/lib.linux-x86_64-3.6/h5py/_hl/selections.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl copying build/lib.linux-x86_64-3.6/h5py/_hl/selections2.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl copying build/lib.linux-x86_64-3.6/h5py/_hl/vds.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl copying build/lib.linux-x86_64-3.6/h5py/_hl/dataset.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl copying build/lib.linux-x86_64-3.6/h5py/__init__.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5py_warnings.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/highlevel.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/ipy_completer.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/version.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_vds/__init__.py to __init__.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_vds/test_highlevel_vds.py to test_highlevel_vds.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_vds/test_lowlevel_vds.py to test_lowlevel_vds.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_vds/test_virtual_source.py to test_virtual_source.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/__init__.py to __init__.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/common.py to common.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_attribute_create.py to test_attribute_create.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_attrs.py to test_attrs.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_attrs_data.py to test_attrs_data.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_base.py to test_base.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_completions.py to test_completions.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_dataset_getitem.py to test_dataset_getitem.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_dataset_swmr.py to test_dataset_swmr.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_datatype.py to test_datatype.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_deprecation.py to test_deprecation.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_dimension_scales.py to test_dimension_scales.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_dims_dimensionproxy.py to test_dims_dimensionproxy.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_dtype.py to test_dtype.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_file.py to test_file.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_file2.py to test_file2.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_file_image.py to test_file_image.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_filters.py to test_filters.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_group.py to test_group.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_h5.py to test_h5.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_h5d_direct_chunk.py to test_h5d_direct_chunk.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_h5f.py to test_h5f.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_h5p.py to test_h5p.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_h5pl.py to test_h5pl.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_h5t.py to test_h5t.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_objects.py to test_objects.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_selections.py to test_selections.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_slicing.py to test_slicing.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_threads.py to test_threads.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_dataset.py to test_dataset.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl/__init__.py to __init__.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl/attrs.py to attrs.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl/base.py to base.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl/compat.py to compat.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl/datatype.py to datatype.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl/dims.py to dims.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl/files.py to files.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl/filters.py to filters.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl/group.py to group.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl/selections.py to selections.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl/selections2.py to selections2.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl/vds.py to vds.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl/dataset.py to dataset.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/__init__.py to __init__.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/h5py_warnings.py to h5py_warnings.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/highlevel.py to highlevel.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/ipy_completer.py to ipy_completer.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py/version.py to version.cpython-36.pyc writing byte-compilation script '/tmp/tmp97kx8mwp.py' /usr/bin/python3 /tmp/tmp97kx8mwp.py removing /tmp/tmp97kx8mwp.py running install_egg_info running egg_info writing h5py.egg-info/PKG-INFO writing dependency_links to h5py.egg-info/dependency_links.txt writing requirements to h5py.egg-info/requires.txt writing top-level names to h5py.egg-info/top_level.txt reading manifest file 'h5py.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' no previously-included directories found matching 'docs/_build' no previously-included directories found matching 'docs_api/_build' warning: no previously-included files matching '.DS_Store' found under directory '*' warning: no previously-included files found matching 'ci' warning: no previously-included files found matching 'other' warning: no previously-included files found matching '.github' warning: no previously-included files matching '*' found under directory 'ci' warning: no previously-included files matching '*' found under directory 'other' warning: no previously-included files matching '*' found under directory '.github' warning: no previously-included files found matching 'pavement.py' warning: no previously-included files found matching '*.yml' warning: no previously-included files found matching '*.yaml' warning: no previously-included files matching '__pycache__' found under directory '*' warning: no previously-included files matching '*.py[co]' found under directory '*' warning: no previously-included files found matching '.coveragerc' warning: no previously-included files found matching '.mailmap' warning: no previously-included files found matching 'rever.xsh' no previously-included directories found matching 'news' writing manifest file 'h5py.egg-info/SOURCES.txt' Copying h5py.egg-info to /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages/h5py-2.10.0-py3.6.egg-info running install_scripts + mv build serial + python_binary=/usr/bin/python3 + buildroot_path=/builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6/site-packages + bytecode_compilation_path=./usr/lib64/python3.6/site-packages + failure=0 + pushd /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64 ~/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64 ~/build/BUILD/h5py-2.10.0 + find ./usr/lib64/python3.6/site-packages -type f -a -name '*.py' -print0 + xargs -0 /usr/bin/python3 -O -m py_compile + find ./usr/lib64/python3.6/site-packages -type f -a -name '*.py' -print0 + xargs -0 /usr/bin/python3 -m py_compile + popd ~/build/BUILD/h5py-2.10.0 + test 0 -eq 0 + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-compress + /usr/lib/rpm/redhat/brp-strip /usr/bin/strip + /usr/lib/rpm/redhat/brp-strip-comment-note /usr/bin/strip /usr/bin/objdump + /usr/lib/rpm/redhat/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/brp-python-bytecompile /usr/bin/python3 1 Bytecompiling .py files below /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/lib64/python3.6 using /usr/bin/python3.6 + /usr/lib/rpm/redhat/brp-python-hardlink + /usr/lib/rpm/redhat/brp-java-repack-jars Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.UysImq + umask 022 + cd /builddir/build/BUILD + cd h5py-2.10.0 + exit 0 Processing files: python3-h5py-2.10.0-4.el7.x86_64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.9sVGt7 + umask 022 + cd /builddir/build/BUILD + cd h5py-2.10.0 + DOCDIR=/builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/share/doc/python3-h5py-2.10.0 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/share/doc/python3-h5py-2.10.0 + cp -pr ANN.rst /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/share/doc/python3-h5py-2.10.0 + cp -pr README.rst /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/share/doc/python3-h5py-2.10.0 + cp -pr examples /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/share/doc/python3-h5py-2.10.0 + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.eXaSBO + umask 022 + cd /builddir/build/BUILD + cd h5py-2.10.0 + LICENSEDIR=/builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/share/licenses/python3-h5py-2.10.0 + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/share/licenses/python3-h5py-2.10.0 + cp -pr licenses/hdf5.txt licenses/license.txt licenses/pytables.txt licenses/python.txt licenses/stdint.txt /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/share/licenses/python3-h5py-2.10.0 + exit 0 Provides: python3-h5py = 2.10.0-4.el7 python3-h5py(x86-64) = 2.10.0-4.el7 python3.6dist(h5py) = 2.10.0 python36-h5py = 2.10.0-4.el7 python36-h5py(x86-64) = 2.10.0-4.el7 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.4)(64bit) libgomp.so.1()(64bit) libhdf5.so.8()(64bit) libhdf5_hl.so.8()(64bit) liblzf.so.1()(64bit) libpthread.so.0()(64bit) libpthread.so.0(GLIBC_2.2.5)(64bit) libpython3.6m.so.1.0()(64bit) python(abi) = 3.6 rtld(GNU_HASH) Obsoletes: python36-h5py < 2.10.0-4.el7 Processing files: python3-h5py-openmpi-2.10.0-4.el7.x86_64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.I4H1qA + umask 022 + cd /builddir/build/BUILD + cd h5py-2.10.0 + DOCDIR=/builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/share/doc/python3-h5py-openmpi-2.10.0 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/share/doc/python3-h5py-openmpi-2.10.0 + cp -pr ANN.rst /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/share/doc/python3-h5py-openmpi-2.10.0 + cp -pr README.rst /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/share/doc/python3-h5py-openmpi-2.10.0 + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.VG19gm + umask 022 + cd /builddir/build/BUILD + cd h5py-2.10.0 + LICENSEDIR=/builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/share/licenses/python3-h5py-openmpi-2.10.0 + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/share/licenses/python3-h5py-openmpi-2.10.0 + cp -pr licenses/hdf5.txt licenses/license.txt licenses/pytables.txt licenses/python.txt licenses/stdint.txt /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64/usr/share/licenses/python3-h5py-openmpi-2.10.0 + exit 0 Provides: python3-h5py-openmpi = 2.10.0-4.el7 python3-h5py-openmpi(x86-64) = 2.10.0-4.el7 python36-h5py-openmpi = 2.10.0-4.el7 python36-h5py-openmpi(x86-64) = 2.10.0-4.el7 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.4)(64bit) libgomp.so.1()(64bit) libhdf5.so.8()(64bit) libhdf5_hl.so.8()(64bit) liblzf.so.1()(64bit) libpthread.so.0()(64bit) libpthread.so.0(GLIBC_2.2.5)(64bit) libpython3.6m.so.1.0()(64bit) python(abi) = 3.6 rtld(GNU_HASH) Obsoletes: python36-h5py-openmpi < 2.10.0-4.el7 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64 Wrote: /builddir/build/RPMS/python3-h5py-2.10.0-4.el7.x86_64.rpm Wrote: /builddir/build/RPMS/python3-h5py-openmpi-2.10.0-4.el7.x86_64.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.1iUN94 + umask 022 + cd /builddir/build/BUILD + cd h5py-2.10.0 + /usr/bin/rm -rf /builddir/build/BUILDROOT/h5py-2.10.0-4.el7.x86_64 + exit 0 Finish: rpmbuild h5py-2.10.0-4.el7.src.rpm Finish: build phase for h5py-2.10.0-4.el7.src.rpm INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/epel-7-x86_64-1600863739.909334/root/var/log/dnf.rpm.log /var/lib/mock/epel-7-x86_64-1600863739.909334/root/var/log/dnf.librepo.log /var/lib/mock/epel-7-x86_64-1600863739.909334/root/var/log/dnf.log INFO: Done(/var/lib/copr-rpmbuild/results/h5py-2.10.0-4.el7.src.rpm) Config(child) 5 minutes 4 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run