NNLS_MF_Final {phytoclass}R Documentation

Perform matrix factorisation for phytoplankton pigments and pigments ratios

Description

Performs the non-negative matrix factorisation for given phytoplankton pigments and pigment ratios, to attain an estimate of phytoplankton class abundances.

Usage

NNLS_MF_Final(Fn, S, S_Chl, cm)

Arguments

Fn

xx

S

xx

S_Chl

xx

cm

xx

Details

Unlike NNLS_ML(), it also removes any weighting and normalisation, and also multiplies relative abundances by chlorophyll values to determine the biomass of phytoplankton groups.


[Package phytoclass version 2.0.0 Index]