collectBestMatchInfo {ProActive} | R Documentation |
Collect information regarding the pattern-match
Description
Make a list containing the match-score, min and max pattern-match values, the start and stop positions of the elevated or gapped region, the elevation ratio and the classification
Usage
collectBestMatchInfo(pattern, pileupSubset, elevOrGap, leftRightFull)
Arguments
pattern |
A vector containing the values associated with the pattern-match |
pileupSubset |
A subset of the pileup that pertains only to the contig/chunk currently being assessed. |
elevOrGap |
Pattern-matching on 'elevation' or 'gap' pattern. |
leftRightFull |
'Left' or'Right' partial gap/elevation pattern or full elevation/gap pattern. |
[Package ProActive version 0.1.0 Index]