prune {HetSeq}R Documentation

Prune trajectories

Description

Prune trajectories down to top.n candidates to reduce runtime of subsequent mincostflow function.

Usage

prune(D.list, top.n = 10)

Arguments

D.list

List of distance matrices. Can be generated by the distmat function.

top.n

Prune trajectories to only top.n possible connections to optimize subsequent application of the mincostflow function.

Value

Pruned distance matrix between cells from multiple timepoints.

Examples



# Full vignette available on https://grandr.erhard-lab.de/articles/web/hetseq.html

  prune(D.list, top.n = 10)


[Package HetSeq version 0.1.0 Index]