limmaFit {easybio}R Documentation

Fit a Linear Model for RNA-seq data using limma

Description

This function fits a linear model to processed DGEList data using the limma package. It defines contrasts between groups and performs differential expression analysis.

Usage

limmaFit(x, group.column)

Arguments

x

A processed DGEList object containing normalized count data.

group.column

The name of the column in x$samples that contains the grouping information for the samples.

Value

An eBayes object containing the fitted linear model and results of the differential expression analysis.


[Package easybio version 1.1.1 Index]