dprocess_dgeList {easybio} | R Documentation |
Filter Low-Expressed Genes and Normalize DGEList Data
Description
This function filters out low-expressed genes from a DGEList
object and
normalizes the count data. It also provides diagnostic plots for raw and
filtered data.
Usage
dprocess_dgeList(x, group.column, min.count = 10)
Arguments
x |
A |
group.column |
The name of the column in |
min.count |
The minimum number of counts required for a gene to be considered expressed. Genes with counts below this threshold in any group will be filtered out. Defaults to 10. |
Value
The function returns a DGEList
object with low-expressed genes
filtered out and normalization factors calculated.
[Package easybio version 1.1.1 Index]