SangerData2 {FBMS} | R Documentation |
Gene expression data lymphoblastoid cell lines of all 210 unrelated HapMap individuals from four populations
Description
A 210 times 3221 matrix with indviduals along the rows and expression data along the columns
Usage
data(SangerData2)
Format
A data frame with 210 rows and 3221 variables
Details
The first column corresponds to column number 24266 (with name GI_6005726-S) in the original data. Column names give the name of the variables, row names the "name" of the individuals. This is a subset of SangerData where the 3220 last rows are select among all original rows following the same pre-processing procedure as in (section 1.6.1). See also the file Read_sanger_data.R
Source
Dataset downloaded from https://ftp.sanger.ac.uk/pub/genevar/
References:
Stranger, BE et al (2007): Relative impact of nucleotide and copy number variation on gene expression phenotypes Science, 2007•science.org
Bogdan et al (2020): Handbook of Multiple Comparisons, https://arxiv.org/pdf/2011.12154