get_sample_locations {quicR} | R Documentation |
Get the well locations of the samples used in the RT-QuIC run.
Description
Returns a dataframe with the sample IDs and well IDs used in the plate.
Usage
get_sample_locations(
file,
tab_name = "Sample IDs",
dilution_bool = FALSE,
dilution_fun = function(x) 1 * x,
sep = "\n",
plate = 96
)
Arguments
file |
Excel file exported from MARS |
tab_name |
Table name containing the sample IDs. |
dilution_bool |
Logical; is there a table containing dilution factors? If so, will add a newline and the log of the dilution factor to the ID column. |
dilution_fun |
A function for transforming the dilution factor. |
sep |
A string used to separate the sample ID and dilution factor. |
plate |
Integer; either 96 or 384 to denote microplate type. |
Value
A vector containing well IDs.
Examples
file <- system.file(
"extdata/input_files",
file = "test.xlsx",
package = "quicR"
)
get_sample_locations(file)
[Package quicR version 2.1.0 Index]