build_Lifemap {LifemapR}R Documentation

A function to construct a LifemapR object, usable by the other functions of the package.

Description

A function to construct a LifemapR object, usable by the other functions of the package.

Usage

build_Lifemap(df, basemap = NULL, verbose = TRUE)

Arguments

df

A dataframe containing at least one column named "taxid" that contains NCBI Taxonomy Identifiers (taxid). The dataframe can contain any number of additional columns defining traits/characters/values associated to each taxid.

basemap

Deprecated argument.

verbose

If TRUE (the default), the function will print detailed information to the console. If FALSE, it will run silently.

Value

A list of class lifemap_obj containing:

Examples

data(eukaryotes_80)
## Not run: 
# make sure you have a good internet connection to load these very large files
LM <- build_Lifemap(eukaryotes_80)

## End(Not run)

[Package LifemapR version 1.1.5 Index]