Estimates Growth Parameters from Models and Plots the Curve


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Documentation for package ‘MicrobialGrowth’ version 1.0.0

Help Pages

.baranyi.formula Baranyi equation.
.checkMicrobialGrowthArgs Check MicrobialGrowth arguments (regression function)
.checkMicrobialGrowthCreateArgs Check MicrobialGrowth arguments (create function)
.checkModelIntegrity Model Integrity Checker
.getDefaultNlsValues Default NLS values
.gompertz.formula Gompertz equation.
.linear.formula Linear equation.
.MicrobialGrowth.baranyi Baranyi regression function
.MicrobialGrowth.gompertz Gompertz regression function
.MicrobialGrowth.linear Linear regression function
.MicrobialGrowth.rosso Rosso regression function
.new.baranyi.core Baranyi object
.new.gompertz.core Gompertz object
.new.linear.core Linear object
.new.MicrobialGrowth.core MicrobialGrowth object
.new.rosso.core Rosso object
.parseMicrobialGrowthCreateArgs Coefficient argument parser (create function)
.rosso.formula Rosso equation.
Acid Acid
Acid.SpecificPair Acid - specific pair ('alpha', 'MIC')
baranyi.create Baranyi create function
example_data Example data from the MicrobialGrowth package
getCreateFunctionName Create function name getter
getFormula Formula getter
getFunctionName Regression function name getter
getModelName Model name getter
gompertz.create Gompertz create function
gompertz.explain Graphical Example of Modified Gompertz Equation.
is.acid Acid class
is.acid.specific.pair Acid.SpecificPair class
is.baranyi Baranyi class
is.gompertz Gompertz class
is.linear Linear class
is.MicrobialGrowth MicrobialGrowth class
is.rosso Rosso class
linear.create Linear create function
listAvailableModels List available models.
MicrobialGrowth MicrobialGrowth regression function
MicrobialGrowth.create MicrobialGrowth create function
Ops.acid Operators on the Acid Class
plot.gompertz Gompertz plot function
plot.linear Linear plot function
plot.MicrobialGrowth MicrobialGrowth plot function
print.acid Acid print function
print.acid.specific.pair Acid.SpecificPair print function
print.gompertz Gompertz print function
print.MicrobialGrowth MicrobialGrowth print function
rosso.create Rosso create function
summary.MicrobialGrowth MicrobialGrowth summary function
THRESHOLD_FEW_DATA Threshold when little data is used in a regression