target.help {SHIP} | R Documentation |
Transform a list of Pathway IDs into a binary matrix.
Description
This function is an internal function used to transform the given list of
p
(one vector of pathway IDs per gene) groups into a binary matrix.
Usage
target.help(genes)
Arguments
genes |
List of |
Value
A p \times p
binary matrix: the coefficient (i,j) is 1
if genes i and j belong to a common pathway and 0 otherwise. This is an
internal function called by for example targetG
.
Author(s)
Monika Jelizarow and Vincent Guillemot
See Also
targetF
,targetG
,targetGpos
,
targetGstar
.
Examples
g1 <- c("path1", "path2", "path3", "path4")
g2 <- c("path5", "path6", "path3", "path11")
g3 <- c("path10", "path5", "path12", "path13")
target.help(list(g1, g2, g3))
[Package SHIP version 2.0.3 Index]