diag_save {ComBatFamQC} | R Documentation |
Export Batch Effect Diagnosis Results
Description
Save all the batch effect diagnosis results in a single Excel file or a Quarto report.
Usage
diag_save(path, result, use_quarto = TRUE)
Arguments
path |
The path to save the result. |
result |
A list derived from |
use_quarto |
A boolean variable indicating whether to generate a Quarto report. |
Value
This function does not return a value. It saves the data to the specified file.
Examples
if(interactive()){
result <- visual_prep(type = "lm", features = "thickness.left.cuneus",
batch = "manufac", covariates = "AGE", df = adni[1:100, ], mdmr = FALSE, cores = 1)
temp_dir <- tempfile()
dir.create(temp_dir)
diag_save(temp_dir, result, quarto = FALSE)
message("Diagnostics saved to: ", temp_dir)
unlink(temp_dir, recursive = TRUE) # Clean up the temporary directory
}
[Package ComBatFamQC version 1.0.6 Index]