plot_simulation_outcome {DamageDetective} | R Documentation |
plot_simulation_outcome
Description
Function to generate quality control plots for altered and unaltered counts.
Usage
plot_simulation_outcome(
qc_summary,
target_damage = c(0.1, 0.8),
palette = c("grey", "#7023FD", "#E60006")
)
Arguments
qc_summary |
A data frame containing the quality control summary for cells. |
target_damage |
Numeric vector specifying the target damage levels for color scaling. |
palette |
A character vector specifying the color gradient used for coloring the damage levels. |
Details
This function generates a combined plot showing the distributions of various quality control metrics (such as mitochondrial and ribosomal proportions) before and after damage simulation. It compares unaltered counts against altered counts for a more comprehensive assessment.
Value
A ggplot2
object representing the combined plot of altered
and unaltered counts.
[Package DamageDetective version 1.0.0 Index]