get.bedpe.id {bedr}R Documentation

get BEDPE ID from VCF ID

Description

Get IDs for each breakpoint pair from the VCF file. Used in the 'vcf2bedpe' function.

Usage

get.bedpe.id(df)

Arguments

df

a dataframe object from a VCF file

Value

A column vector of names assigned to each Structural Variant in the BEDPE file

Author(s)

Helena Winata

Examples

## Not run: 
  name <- get.bedpe.id(x.vcf)
  
## End(Not run)

[Package bedr version 1.1.3 Index]