get.strand {bedr} | R Documentation |
get BEDPE ID from VCF ID
Description
Get strand informattion for each breakpoint from the VCF file (ALT or STRAND column). Used in the 'vcf2bedpe' function.
Usage
get.strand(df)
Arguments
df |
a dataframe object from a VCF file |
Value
A column vector of strand information for each breakpoints
Author(s)
Helena Winata
Examples
## Not run:
name <- get.strand(x.vcf)
## End(Not run)
[Package bedr version 1.1.3 Index]