process_eamd {oncmap}R Documentation

Process input file and return adherence report

Description

Process input file and return adherence report

Usage

process_eamd(
  infile,
  include_formats = NULL,
  exclude_formats = NULL,
  formats_def = NULL,
  infile_data_output = FALSE,
  regimen = NULL,
  patinfo = NULL,
  nonmonit = NULL,
  med = "",
  adhstart = NULL,
  adhend = NULL
)

Arguments

infile

Input CSV file name

include_formats

Which formats to include in checking

exclude_formats

Which formats to exclude from checking

formats_def

New formats definition

infile_data_output

Include infile data frame in the result

regimen

Regimen - regimen definition

patinfo

Patient info - patient specific information

nonmonit

Non-monitored date intervals

med

Medication name

adhstart

Report adherence start date

adhend

Report adherence end date

Value

A list containing variables:

Examples

  input_file <- system.file('extdata', 'sample-data-ecap2.csv', package = 'oncmap')
  report <- process_eamd("tests/testthat/ecap1.csv")

[Package oncmap version 0.1.7 Index]