Warning: Permanently added '2620:52:3:1:dead:beef:cafe:c115' (ED25519) to the list of known hosts.

You can reproduce this build on your computer by running:

  sudo dnf install copr-rpmbuild
  /usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/8957487-fedora-41-x86_64 --chroot fedora-41-x86_64


Version: 1.3
PID: 14525
Logging PID: 14526
Task:
{'allow_user_ssh': False,
 'appstream': False,
 'background': False,
 'bootstrap': 'off',
 'build_id': 8957487,
 'buildroot_pkgs': [],
 'chroot': 'fedora-41-x86_64',
 'enable_net': False,
 'fedora_review': False,
 'git_hash': 'd7af52472960376665a4b779de7e7beba7d206d0',
 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/iucar/cran/R-CRAN-Seurat',
 'isolation': 'default',
 'memory_reqs': 2048,
 'package_name': 'R-CRAN-Seurat',
 'package_version': '5.3.0-1.copr8957487',
 'project_dirname': 'cran',
 'project_name': 'cran',
 'project_owner': 'iucar',
 'repo_priority': None,
 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/iucar/cran/fedora-41-x86_64/',
            'id': 'copr_base',
            'name': 'Copr repository',
            'priority': None}],
 'sandbox': 'iucar/cran--iucar',
 'source_json': {},
 'source_type': None,
 'ssh_public_keys': None,
 'storage': None,
 'submitter': 'iucar',
 'tags': [],
 'task_id': '8957487-fedora-41-x86_64',
 'timeout': 18000,
 'uses_devel_repo': False,
 'with_opts': [],
 'without_opts': []}

Running: git clone https://copr-dist-git.fedorainfracloud.org/git/iucar/cran/R-CRAN-Seurat /var/lib/copr-rpmbuild/workspace/workdir-10g91l_b/R-CRAN-Seurat --depth 500 --no-single-branch --recursive

cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/iucar/cran/R-CRAN-Seurat', '/var/lib/copr-rpmbuild/workspace/workdir-10g91l_b/R-CRAN-Seurat', '--depth', '500', '--no-single-branch', '--recursive']
cwd: .
rc: 0
stdout: 
stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-10g91l_b/R-CRAN-Seurat'...

Running: git checkout d7af52472960376665a4b779de7e7beba7d206d0 --

cmd: ['git', 'checkout', 'd7af52472960376665a4b779de7e7beba7d206d0', '--']
cwd: /var/lib/copr-rpmbuild/workspace/workdir-10g91l_b/R-CRAN-Seurat
rc: 0
stdout: 
stderr: Note: switching to 'd7af52472960376665a4b779de7e7beba7d206d0'.

You are in 'detached HEAD' state. You can look around, make experimental
changes and commit them, and you can discard any commits you make in this
state without impacting any branches by switching back to a branch.

If you want to create a new branch to retain commits you create, you may
do so (now or later) by using -c with the switch command. Example:

  git switch -c <new-branch-name>

Or undo this operation with:

  git switch -

Turn off this advice by setting config variable advice.detachedHead to false

HEAD is now at d7af524 automatic import of R-CRAN-Seurat

Running: dist-git-client sources

cmd: ['dist-git-client', 'sources']
cwd: /var/lib/copr-rpmbuild/workspace/workdir-10g91l_b/R-CRAN-Seurat
rc: 0
stdout: 
stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD
INFO: Reading stdout from command: git rev-parse HEAD
INFO: Reading sources specification file: sources
INFO: Downloading Seurat_5.3.0.tar.gz
INFO: Reading stdout from command: curl --help all
INFO: Calling: curl -H Pragma: -o Seurat_5.3.0.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/iucar/cran/R-CRAN-Seurat/Seurat_5.3.0.tar.gz/md5/9e27c5ef76f636147eb7d6b856ae98c3/Seurat_5.3.0.tar.gz
  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed
100 2035k  100 2035k    0     0  12.4M      0 --:--:-- --:--:-- --:--:-- 12.5M
INFO: Reading stdout from command: md5sum Seurat_5.3.0.tar.gz

/usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated
Running (timeout=18000): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-10g91l_b/R-CRAN-Seurat/R-CRAN-Seurat.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-10g91l_b/R-CRAN-Seurat --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1745459939.298449 -r /var/lib/copr-rpmbuild/results/configs/child.cfg
INFO: mock.py version 6.1 starting (python version = 3.13.0, NVR = mock-6.1-1.fc41), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-10g91l_b/R-CRAN-Seurat/R-CRAN-Seurat.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-10g91l_b/R-CRAN-Seurat --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1745459939.298449 -r /var/lib/copr-rpmbuild/results/configs/child.cfg
Start: init plugins
INFO: tmpfs initialized
INFO: selinux enabled
INFO: chroot_scan: initialized
INFO: compress_logs: initialized
Finish: init plugins
INFO: Signal handler active
Start: run
INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-10g91l_b/R-CRAN-Seurat/R-CRAN-Seurat.spec)  Config(fedora-41-x86_64)
Start: clean chroot
Finish: clean chroot
Mock Version: 6.1
INFO: Mock Version: 6.1
Start: chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-41-x86_64-1745459939.298449/root.
INFO: calling preinit hooks
INFO: enabled root cache
INFO: enabled package manager cache
Start: cleaning package manager metadata
Finish: cleaning package manager metadata
INFO: enabled HW Info plugin
INFO: Package manager dnf5 detected and used (fallback)
INFO: Buildroot is handled by package management from host and used with --installroot:
  rpm-4.20.1-1.fc41.x86_64
  rpm-sequoia-1.7.0-2.fc41.x86_64
  python3-dnf-4.23.0-1.fc41.noarch
  python3-dnf-plugins-core-4.10.1-1.fc41.noarch
  dnf5-5.2.12.0-2.fc41.x86_64
  dnf5-plugins-5.2.12.0-2.fc41.x86_64
Start: installing minimal buildroot with dnf5
Updating and loading repositories:
 updates                                100% | 882.3 KiB/s |  30.9 KiB |  00m00s
 fedora                                 100% |   1.2 MiB/s |  31.0 KiB |  00m00s
 Copr repository                        100% |  30.8 KiB/s |   1.5 KiB |  00m00s
 Copr repository                        100% |  16.3 MiB/s |  12.6 MiB |  00m01s
Repositories loaded.
Package                            Arch   Version                     Repository      Size
Installing group/module packages:
 bash                              x86_64 5.2.32-1.fc41               fedora       8.2 MiB
 bzip2                             x86_64 1.0.8-19.fc41               fedora      95.7 KiB
 coreutils                         x86_64 9.5-11.fc41                 updates      5.7 MiB
 cpio                              x86_64 2.15-2.fc41                 fedora       1.1 MiB
 diffutils                         x86_64 3.10-8.fc41                 fedora       1.6 MiB
 fedora-release-common             noarch 41-31                       updates     19.7 KiB
 findutils                         x86_64 1:4.10.0-4.fc41             fedora       1.8 MiB
 gawk                              x86_64 5.3.0-4.fc41                fedora       1.7 MiB
 glibc-minimal-langpack            x86_64 2.40-24.fc41                updates      0.0   B
 grep                              x86_64 3.11-9.fc41                 fedora       1.0 MiB
 gzip                              x86_64 1.13-2.fc41                 fedora     389.0 KiB
 info                              x86_64 7.1.1-1.fc41                updates    361.7 KiB
 patch                             x86_64 2.7.6-25.fc41               fedora     266.7 KiB
 redhat-rpm-config                 noarch 294-1.fc41                  updates    183.6 KiB
 rpm-build                         x86_64 4.20.1-1.fc41               updates    193.8 KiB
 sed                               x86_64 4.9-3.fc41                  fedora     861.5 KiB
 shadow-utils                      x86_64 2:4.15.1-12.fc41            fedora       4.1 MiB
 tar                               x86_64 2:1.35-4.fc41               fedora       2.9 MiB
 unzip                             x86_64 6.0-64.fc41                 fedora     386.8 KiB
 util-linux                        x86_64 2.40.4-1.fc41               updates      3.6 MiB
 which                             x86_64 2.21-42.fc41                fedora      80.2 KiB
 xz                                x86_64 1:5.6.2-2.fc41              fedora       1.2 MiB
Installing dependencies:
 add-determinism                   x86_64 0.3.6-3.fc41                updates      2.4 MiB
 alternatives                      x86_64 1.31-1.fc41                 updates     64.8 KiB
 ansible-srpm-macros               noarch 1-16.fc41                   fedora      35.7 KiB
 audit-libs                        x86_64 4.0.3-1.fc41                updates    351.3 KiB
 authselect                        x86_64 1.5.0-8.fc41                fedora     157.6 KiB
 authselect-libs                   x86_64 1.5.0-8.fc41                fedora     822.2 KiB
 basesystem                        noarch 11-21.fc41                  fedora       0.0   B
 binutils                          x86_64 2.43.1-5.fc41               updates     27.4 MiB
 build-reproducibility-srpm-macros noarch 0.3.6-3.fc41                updates    735.0   B
 bzip2-libs                        x86_64 1.0.8-19.fc41               fedora      80.7 KiB
 ca-certificates                   noarch 2024.2.69_v8.0.401-1.0.fc41 fedora       2.4 MiB
 coreutils-common                  x86_64 9.5-11.fc41                 updates     11.2 MiB
 cracklib                          x86_64 2.9.11-6.fc41               fedora     238.9 KiB
 crypto-policies                   noarch 20250124-1.git4d262e7.fc41  updates    137.4 KiB
 curl                              x86_64 8.9.1-3.fc41                updates    793.5 KiB
 cyrus-sasl-lib                    x86_64 2.1.28-27.fc41              fedora       2.3 MiB
 debugedit                         x86_64 5.1-4.fc41                  updates    197.7 KiB
 dwz                               x86_64 0.15-8.fc41                 fedora     298.9 KiB
 ed                                x86_64 1.20.2-2.fc41               fedora     146.9 KiB
 efi-srpm-macros                   noarch 5-13.fc41                   updates     40.2 KiB
 elfutils                          x86_64 0.192-9.fc41                updates      2.7 MiB
 elfutils-debuginfod-client        x86_64 0.192-9.fc41                updates     84.2 KiB
 elfutils-default-yama-scope       noarch 0.192-9.fc41                updates      1.8 KiB
 elfutils-libelf                   x86_64 0.192-9.fc41                updates      1.2 MiB
 elfutils-libs                     x86_64 0.192-9.fc41                updates    670.2 KiB
 fedora-gpg-keys                   noarch 41-1                        fedora     126.4 KiB
 fedora-release                    noarch 41-31                       updates      0.0   B
 fedora-release-identity-basic     noarch 41-31                       updates    682.0   B
 fedora-repos                      noarch 41-1                        fedora       4.9 KiB
 file                              x86_64 5.45-7.fc41                 fedora     103.5 KiB
 file-libs                         x86_64 5.45-7.fc41                 fedora       9.9 MiB
 filesystem                        x86_64 3.18-23.fc41                fedora     106.0   B
 fonts-srpm-macros                 noarch 1:2.0.5-17.fc41             fedora      55.8 KiB
 forge-srpm-macros                 noarch 0.4.0-1.fc41                updates     38.9 KiB
 fpc-srpm-macros                   noarch 1.3-13.fc41                 fedora     144.0   B
 gdb-minimal                       x86_64 16.2-2.fc41                 updates     13.3 MiB
 gdbm                              x86_64 1:1.23-7.fc41               fedora     460.9 KiB
 gdbm-libs                         x86_64 1:1.23-7.fc41               fedora     121.9 KiB
 ghc-srpm-macros                   noarch 1.9.1-2.fc41                fedora     747.0   B
 glibc                             x86_64 2.40-24.fc41                updates      6.7 MiB
 glibc-common                      x86_64 2.40-24.fc41                updates      1.0 MiB
 glibc-gconv-extra                 x86_64 2.40-24.fc41                updates      7.9 MiB
 gmp                               x86_64 1:6.3.0-2.fc41              fedora     811.4 KiB
 gnat-srpm-macros                  noarch 6-6.fc41                    fedora       1.0 KiB
 go-srpm-macros                    noarch 3.6.0-5.fc41                updates     60.8 KiB
 jansson                           x86_64 2.13.1-10.fc41              fedora      88.3 KiB
 json-c                            x86_64 0.17-4.fc41                 fedora      82.4 KiB
 kernel-srpm-macros                noarch 1.0-24.fc41                 fedora       1.9 KiB
 keyutils-libs                     x86_64 1.6.3-4.fc41                fedora      54.4 KiB
 krb5-libs                         x86_64 1.21.3-4.fc41               updates      2.3 MiB
 libacl                            x86_64 2.3.2-2.fc41                fedora      40.0 KiB
 libarchive                        x86_64 3.7.4-4.fc41                updates    926.6 KiB
 libattr                           x86_64 2.5.2-4.fc41                fedora      28.5 KiB
 libblkid                          x86_64 2.40.4-1.fc41               updates    257.2 KiB
 libbrotli                         x86_64 1.1.0-5.fc41                fedora     837.6 KiB
 libcap                            x86_64 2.70-4.fc41                 fedora     220.2 KiB
 libcap-ng                         x86_64 0.8.5-3.fc41                fedora      69.2 KiB
 libcom_err                        x86_64 1.47.1-6.fc41               fedora      67.2 KiB
 libcurl                           x86_64 8.9.1-3.fc41                updates    809.3 KiB
 libeconf                          x86_64 0.6.2-3.fc41                fedora      58.0 KiB
 libevent                          x86_64 2.1.12-14.fc41              fedora     895.7 KiB
 libfdisk                          x86_64 2.40.4-1.fc41               updates    356.4 KiB
 libffi                            x86_64 3.4.6-3.fc41                fedora      86.4 KiB
 libgcc                            x86_64 14.2.1-7.fc41               updates    270.9 KiB
 libgomp                           x86_64 14.2.1-7.fc41               updates    514.2 KiB
 libidn2                           x86_64 2.3.8-1.fc41                updates    556.6 KiB
 libmount                          x86_64 2.40.4-1.fc41               updates    348.8 KiB
 libnghttp2                        x86_64 1.62.1-2.fc41               fedora     166.1 KiB
 libnsl2                           x86_64 2.0.1-2.fc41                fedora      57.9 KiB
 libpkgconf                        x86_64 2.3.0-1.fc41                fedora      78.2 KiB
 libpsl                            x86_64 0.21.5-4.fc41               fedora      80.5 KiB
 libpwquality                      x86_64 1.4.5-11.fc41               fedora     417.8 KiB
 libselinux                        x86_64 3.7-5.fc41                  fedora     181.0 KiB
 libsemanage                       x86_64 3.7-2.fc41                  fedora     293.5 KiB
 libsepol                          x86_64 3.7-2.fc41                  fedora     817.8 KiB
 libsmartcols                      x86_64 2.40.4-1.fc41               updates    176.2 KiB
 libssh                            x86_64 0.10.6-8.fc41               fedora     513.3 KiB
 libssh-config                     noarch 0.10.6-8.fc41               fedora     277.0   B
 libstdc++                         x86_64 14.2.1-7.fc41               updates      2.7 MiB
 libtasn1                          x86_64 4.20.0-1.fc41               updates    180.4 KiB
 libtirpc                          x86_64 1.3.6-1.rc3.fc41            updates    197.6 KiB
 libtool-ltdl                      x86_64 2.4.7-12.fc41               fedora      66.2 KiB
 libunistring                      x86_64 1.1-8.fc41                  fedora       1.7 MiB
 libutempter                       x86_64 1.2.1-15.fc41               fedora      57.7 KiB
 libuuid                           x86_64 2.40.4-1.fc41               updates     39.9 KiB
 libverto                          x86_64 0.3.2-9.fc41                fedora      29.5 KiB
 libxcrypt                         x86_64 4.4.38-7.fc41               updates    288.5 KiB
 libxml2                           x86_64 2.12.10-1.fc41              updates      1.7 MiB
 libzstd                           x86_64 1.5.7-1.fc41                updates    804.0 KiB
 lua-libs                          x86_64 5.4.7-3.fc41                updates    285.0 KiB
 lua-srpm-macros                   noarch 1-14.fc41                   fedora       1.3 KiB
 lz4-libs                          x86_64 1.10.0-1.fc41               fedora     145.5 KiB
 mpfr                              x86_64 4.2.1-5.fc41                fedora     832.1 KiB
 ncurses-base                      noarch 6.5-2.20240629.fc41         fedora     326.3 KiB
 ncurses-libs                      x86_64 6.5-2.20240629.fc41         fedora     975.2 KiB
 ocaml-srpm-macros                 noarch 10-3.fc41                   fedora       1.9 KiB
 openblas-srpm-macros              noarch 2-18.fc41                   fedora     112.0   B
 openldap                          x86_64 2.6.9-1.fc41                updates    645.3 KiB
 openssl-libs                      x86_64 1:3.2.4-1.fc41              updates      7.8 MiB
 p11-kit                           x86_64 0.25.5-3.fc41               fedora       2.2 MiB
 p11-kit-trust                     x86_64 0.25.5-3.fc41               fedora     391.4 KiB
 package-notes-srpm-macros         noarch 0.5-12.fc41                 fedora       1.6 KiB
 pam                               x86_64 1.6.1-7.fc41                updates      1.8 MiB
 pam-libs                          x86_64 1.6.1-7.fc41                updates    139.0 KiB
 pcre2                             x86_64 10.44-1.fc41.1              fedora     653.5 KiB
 pcre2-syntax                      noarch 10.44-1.fc41.1              fedora     251.6 KiB
 perl-srpm-macros                  noarch 1-56.fc41                   fedora     861.0   B
 pkgconf                           x86_64 2.3.0-1.fc41                fedora      88.6 KiB
 pkgconf-m4                        noarch 2.3.0-1.fc41                fedora      14.4 KiB
 pkgconf-pkg-config                x86_64 2.3.0-1.fc41                fedora     989.0   B
 popt                              x86_64 1.19-7.fc41                 fedora     136.9 KiB
 publicsuffix-list-dafsa           noarch 20250116-1.fc41             updates     68.5 KiB
 pyproject-srpm-macros             noarch 1.18.1-1.fc41               updates      1.9 KiB
 python-srpm-macros                noarch 3.13-3.fc41                 fedora      51.0 KiB
 qt5-srpm-macros                   noarch 5.15.15-1.fc41              fedora     500.0   B
 qt6-srpm-macros                   noarch 6.8.2-1.fc41                updates    456.0   B
 readline                          x86_64 8.2-10.fc41                 fedora     493.2 KiB
 rpm                               x86_64 4.20.1-1.fc41               updates      3.1 MiB
 rpm-build-libs                    x86_64 4.20.1-1.fc41               updates    210.7 KiB
 rpm-libs                          x86_64 4.20.1-1.fc41               updates    730.0 KiB
 rpm-sequoia                       x86_64 1.7.0-5.fc41                updates      2.4 MiB
 rust-srpm-macros                  noarch 26.3-3.fc41                 fedora       4.8 KiB
 setup                             noarch 2.15.0-8.fc41               updates    720.7 KiB
 sqlite-libs                       x86_64 3.46.1-2.fc41               updates      1.5 MiB
 systemd-libs                      x86_64 256.12-1.fc41               updates      2.0 MiB
 util-linux-core                   x86_64 2.40.4-1.fc41               updates      1.5 MiB
 xxhash-libs                       x86_64 0.8.3-1.fc41                updates     88.5 KiB
 xz-libs                           x86_64 1:5.6.2-2.fc41              fedora     214.4 KiB
 zig-srpm-macros                   noarch 1-3.fc41                    fedora       1.1 KiB
 zip                               x86_64 3.0-41.fc41                 fedora     703.2 KiB
 zlib-ng-compat                    x86_64 2.2.3-2.fc41                updates    141.9 KiB
 zstd                              x86_64 1.5.7-1.fc41                updates      1.7 MiB
Installing groups:
 Buildsystem building group                                                               

Transaction Summary:
 Installing:       154 packages

Total size of inbound packages is 53 MiB. Need to download 0 B.
After this operation, 181 MiB extra will be used (install 181 MiB, remove 0 B).
[  1/154] tar-2:1.35-4.fc41.x86_64      100% |   0.0   B/s |   0.0   B |  00m00s
>>> Already downloaded                                                          
[  2/154] bzip2-0:1.0.8-19.fc41.x86_64  100% |   0.0   B/s |   0.0   B |  00m00s
>>> Already downloaded                                                          
[  3/154] unzip-0:6.0-64.fc41.x86_64    100% |   0.0   B/s |   0.0   B |  00m00s
>>> Already downloaded                                                          
[  4/154] cpio-0:2.15-2.fc41.x86_64     100% |   0.0   B/s |   0.0   B |  00m00s
>>> Already downloaded                                                          
[  5/154] which-0:2.21-42.fc41.x86_64   100% |   0.0   B/s |   0.0   B |  00m00s
>>> Already downloaded                                                          
[  6/154] bash-0:5.2.32-1.fc41.x86_64   100% |   0.0   B/s |   0.0   B |  00m00s
>>> Already downloaded                                                          
[  7/154] grep-0:3.11-9.fc41.x86_64     100% |   0.0   B/s |   0.0   B |  00m00s
>>> Already downloaded                                                          
[  8/154] patch-0:2.7.6-25.fc41.x86_64  100% |   0.0   B/s |   0.0   B |  00m00s
>>> Already downloaded                                                          
[  9/154] sed-0:4.9-3.fc41.x86_64       100% |   0.0   B/s |   0.0   B |  00m00s
>>> Already downloaded                                                          
[ 10/154] shadow-utils-2:4.15.1-12.fc41 100% |   0.0   B/s |   0.0   B |  00m00s
>>> Already downloaded                                                          
[ 11/154] diffutils-0:3.10-8.fc41.x86_6 100% |   0.0   B/s |   0.0   B |  00m00s
>>> Already downloaded                                                          
[ 12/154] findutils-1:4.10.0-4.fc41.x86 100% |   0.0   B/s |   0.0   B |  00m00s
>>> Already downloaded                                                          
[ 13/154] gzip-0:1.13-2.fc41.x86_64     100% |   0.0   B/s |   0.0   B |  00m00s
>>> Already downloaded                                                          
[ 14/154] xz-1:5.6.2-2.fc41.x86_64      100% |   0.0   B/s |   0.0   B |  00m00s
>>> Already downloaded                                                          
[ 15/154] redhat-rpm-config-0:294-1.fc4 100% |   0.0   B/s |   0.0   B |  00m00s
>>> Already downloaded                                                          
[ 16/154] rpm-build-0:4.20.1-1.fc41.x86 100% |   0.0   B/s |   0.0   B |  00m00s
>>> Already downloaded                                                          
[ 17/154] coreutils-0:9.5-11.fc41.x86_6 100% |   0.0   B/s |   0.0   B |  00m00s
>>> Already downloaded                                                          
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--------------------------------------------------------------------------------
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Running transaction
Importing OpenPGP key 0xE99D6AD1:
 UserID     : "Fedora (41) <fedora-41-primary@fedoraproject.org>"
 Fingerprint: 466CF2D8B60BC3057AA9453ED0622462E99D6AD1
 From       : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-41-primary
The key was successfully imported.
[  1/156] Verify package files          100% | 754.0   B/s | 154.0   B |  00m00s
[  2/156] Prepare transaction           100% |   1.8 KiB/s | 154.0   B |  00m00s
[  3/156] Installing libgcc-0:14.2.1-7. 100% | 133.1 MiB/s | 272.5 KiB |  00m00s
[  4/156] Installing publicsuffix-list- 100% |  67.6 MiB/s |  69.2 KiB |  00m00s
[  5/156] Installing libssh-config-0:0. 100% |   0.0   B/s | 816.0   B |  00m00s
[  6/156] Installing fedora-release-ide 100% | 918.0 KiB/s | 940.0   B |  00m00s
[  7/156] Installing fedora-gpg-keys-0: 100% |  18.7 MiB/s | 172.2 KiB |  00m00s
[  8/156] Installing fedora-repos-0:41- 100% |   0.0   B/s |   5.7 KiB |  00m00s
[  9/156] Installing fedora-release-com 100% |  11.7 MiB/s |  24.0 KiB |  00m00s
[ 10/156] Installing fedora-release-0:4 100% |   0.0   B/s | 124.0   B |  00m00s
[ 11/156] Installing setup-0:2.15.0-8.f 100% |  47.3 MiB/s | 726.5 KiB |  00m00s
>>> [RPM] /etc/hosts created as /etc/hosts.rpmnew                               
[ 12/156] Installing filesystem-0:3.18- 100% |   1.6 MiB/s | 212.5 KiB |  00m00s
[ 13/156] Installing basesystem-0:11-21 100% |   0.0   B/s | 124.0   B |  00m00s
[ 14/156] Installing qt6-srpm-macros-0: 100% |   0.0   B/s | 732.0   B |  00m00s
[ 15/156] Installing pkgconf-m4-0:2.3.0 100% |   0.0   B/s |  14.8 KiB |  00m00s
[ 16/156] Installing pcre2-syntax-0:10. 100% | 124.1 MiB/s | 254.1 KiB |  00m00s
[ 17/156] Installing ncurses-base-0:6.5 100% |  34.3 MiB/s | 351.7 KiB |  00m00s
[ 18/156] Installing glibc-minimal-lang 100% |   0.0   B/s | 124.0   B |  00m00s
[ 19/156] Installing ncurses-libs-0:6.5 100% | 137.0 MiB/s | 981.8 KiB |  00m00s
[ 20/156] Installing glibc-0:2.40-24.fc 100% | 202.6 MiB/s |   6.7 MiB |  00m00s
[ 21/156] Installing bash-0:5.2.32-1.fc 100% | 272.3 MiB/s |   8.2 MiB |  00m00s
[ 22/156] Installing glibc-common-0:2.4 100% | 131.4 MiB/s |   1.1 MiB |  00m00s
[ 23/156] Installing glibc-gconv-extra- 100% | 151.7 MiB/s |   8.0 MiB |  00m00s
[ 24/156] Installing zlib-ng-compat-0:2 100% |  69.7 MiB/s | 142.7 KiB |  00m00s
[ 25/156] Installing bzip2-libs-0:1.0.8 100% |  79.9 MiB/s |  81.8 KiB |  00m00s
[ 26/156] Installing xz-libs-1:5.6.2-2. 100% | 210.4 MiB/s | 215.5 KiB |  00m00s
[ 27/156] Installing popt-0:1.19-7.fc41 100% |  35.0 MiB/s | 143.5 KiB |  00m00s
[ 28/156] Installing readline-0:8.2-10. 100% | 161.2 MiB/s | 495.3 KiB |  00m00s
[ 29/156] Installing libuuid-0:2.40.4-1 100% |  40.0 MiB/s |  41.0 KiB |  00m00s
[ 30/156] Installing libblkid-0:2.40.4- 100% | 252.1 MiB/s | 258.2 KiB |  00m00s
[ 31/156] Installing libattr-0:2.5.2-4. 100% |  28.8 MiB/s |  29.5 KiB |  00m00s
[ 32/156] Installing libacl-0:2.3.2-2.f 100% |  39.8 MiB/s |  40.7 KiB |  00m00s
[ 33/156] Installing gmp-1:6.3.0-2.fc41 100% | 264.9 MiB/s | 813.7 KiB |  00m00s
[ 34/156] Installing libxcrypt-0:4.4.38 100% | 142.2 MiB/s | 291.2 KiB |  00m00s
[ 35/156] Installing libzstd-0:1.5.7-1. 100% | 262.1 MiB/s | 805.1 KiB |  00m00s
[ 36/156] Installing elfutils-libelf-0: 100% | 292.5 MiB/s |   1.2 MiB |  00m00s
[ 37/156] Installing libstdc++-0:14.2.1 100% | 269.9 MiB/s |   2.7 MiB |  00m00s
[ 38/156] Installing libeconf-0:0.6.2-3 100% |  58.3 MiB/s |  59.7 KiB |  00m00s
[ 39/156] Installing gdbm-libs-1:1.23-7 100% | 120.7 MiB/s | 123.6 KiB |  00m00s
[ 40/156] Installing dwz-0:0.15-8.fc41. 100% | 146.6 MiB/s | 300.3 KiB |  00m00s
[ 41/156] Installing mpfr-0:4.2.1-5.fc4 100% | 203.5 MiB/s | 833.7 KiB |  00m00s
[ 42/156] Installing gawk-0:5.3.0-4.fc4 100% | 173.2 MiB/s |   1.7 MiB |  00m00s
[ 43/156] Installing unzip-0:6.0-64.fc4 100% | 127.0 MiB/s | 390.3 KiB |  00m00s
[ 44/156] Installing file-libs-0:5.45-7 100% | 496.7 MiB/s |   9.9 MiB |  00m00s
[ 45/156] Installing file-0:5.45-7.fc41 100% |   7.3 MiB/s | 105.0 KiB |  00m00s
[ 46/156] Installing crypto-policies-0: 100% |  14.5 MiB/s | 163.7 KiB |  00m00s
[ 47/156] Installing pcre2-0:10.44-1.fc 100% | 213.2 MiB/s | 654.9 KiB |  00m00s
[ 48/156] Installing grep-0:3.11-9.fc41 100% | 111.5 MiB/s |   1.0 MiB |  00m00s
[ 49/156] Installing xz-1:5.6.2-2.fc41. 100% | 109.5 MiB/s |   1.2 MiB |  00m00s
[ 50/156] Installing libcap-ng-0:0.8.5- 100% |  69.4 MiB/s |  71.0 KiB |  00m00s
[ 51/156] Installing audit-libs-0:4.0.3 100% | 115.0 MiB/s | 353.4 KiB |  00m00s
[ 52/156] Installing pam-libs-0:1.6.1-7 100% |  69.0 MiB/s | 141.3 KiB |  00m00s
[ 53/156] Installing libcap-0:2.70-4.fc 100% |  55.0 MiB/s | 225.2 KiB |  00m00s
[ 54/156] Installing systemd-libs-0:256 100% | 225.6 MiB/s |   2.0 MiB |  00m00s
[ 55/156] Installing libsepol-0:3.7-2.f 100% | 266.5 MiB/s | 818.8 KiB |  00m00s
[ 56/156] Installing libselinux-0:3.7-5 100% |  89.0 MiB/s | 182.3 KiB |  00m00s
[ 57/156] Installing sed-0:4.9-3.fc41.x 100% | 106.2 MiB/s | 869.7 KiB |  00m00s
[ 58/156] Installing findutils-1:4.10.0 100% | 185.8 MiB/s |   1.9 MiB |  00m00s
[ 59/156] Installing libmount-0:2.40.4- 100% | 170.8 MiB/s | 349.8 KiB |  00m00s
[ 60/156] Installing libsmartcols-0:2.4 100% | 173.2 MiB/s | 177.4 KiB |  00m00s
[ 61/156] Installing lua-libs-0:5.4.7-3 100% | 139.7 MiB/s | 286.2 KiB |  00m00s
[ 62/156] Installing lz4-libs-0:1.10.0- 100% | 143.1 MiB/s | 146.6 KiB |  00m00s
[ 63/156] Installing libcom_err-0:1.47. 100% |  66.7 MiB/s |  68.3 KiB |  00m00s
[ 64/156] Installing alternatives-0:1.3 100% |  64.8 MiB/s |  66.4 KiB |  00m00s
[ 65/156] Installing libffi-0:3.4.6-3.f 100% |  85.7 MiB/s |  87.8 KiB |  00m00s
[ 66/156] Installing libtasn1-0:4.20.0- 100% |  89.0 MiB/s | 182.2 KiB |  00m00s
[ 67/156] Installing p11-kit-0:0.25.5-3 100% | 138.0 MiB/s |   2.2 MiB |  00m00s
[ 68/156] Installing libunistring-0:1.1 100% | 288.5 MiB/s |   1.7 MiB |  00m00s
[ 69/156] Installing libidn2-0:2.3.8-1. 100% |  91.6 MiB/s | 562.8 KiB |  00m00s
[ 70/156] Installing libpsl-0:0.21.5-4. 100% |  79.7 MiB/s |  81.7 KiB |  00m00s
[ 71/156] Installing p11-kit-trust-0:0. 100% |  24.0 MiB/s | 393.1 KiB |  00m00s
[ 72/156] Installing zstd-0:1.5.7-1.fc4 100% | 213.8 MiB/s |   1.7 MiB |  00m00s
[ 73/156] Installing util-linux-core-0: 100% | 122.9 MiB/s |   1.5 MiB |  00m00s
[ 74/156] Installing tar-2:1.35-4.fc41. 100% | 211.3 MiB/s |   3.0 MiB |  00m00s
[ 75/156] Installing libsemanage-0:3.7- 100% |  96.1 MiB/s | 295.2 KiB |  00m00s
[ 76/156] Installing shadow-utils-2:4.1 100% |  77.1 MiB/s |   4.2 MiB |  00m00s
[ 77/156] Installing libutempter-0:1.2. 100% |  29.2 MiB/s |  59.7 KiB |  00m00s
[ 78/156] Installing zip-0:3.0-41.fc41. 100% | 172.6 MiB/s | 707.1 KiB |  00m00s
[ 79/156] Installing gdbm-1:1.23-7.fc41 100% |  91.0 MiB/s | 465.8 KiB |  00m00s
[ 80/156] Installing cyrus-sasl-lib-0:2 100% | 230.6 MiB/s |   2.3 MiB |  00m00s
[ 81/156] Installing libfdisk-0:2.40.4- 100% | 174.5 MiB/s | 357.4 KiB |  00m00s
[ 82/156] Installing libxml2-0:2.12.10- 100% | 245.8 MiB/s |   1.7 MiB |  00m00s
[ 83/156] Installing bzip2-0:1.0.8-19.f 100% |  48.9 MiB/s | 100.2 KiB |  00m00s
[ 84/156] Installing sqlite-libs-0:3.46 100% | 245.4 MiB/s |   1.5 MiB |  00m00s
[ 85/156] Installing add-determinism-0: 100% | 294.5 MiB/s |   2.4 MiB |  00m00s
[ 86/156] Installing build-reproducibil 100% |   1.0 MiB/s |   1.0 KiB |  00m00s
[ 87/156] Installing ed-0:1.20.2-2.fc41 100% |  72.8 MiB/s | 149.2 KiB |  00m00s
[ 88/156] Installing patch-0:2.7.6-25.f 100% | 131.0 MiB/s | 268.2 KiB |  00m00s
[ 89/156] Installing elfutils-default-y 100% | 157.2 KiB/s |   2.0 KiB |  00m00s
[ 90/156] Installing elfutils-libs-0:0. 100% | 164.1 MiB/s | 672.1 KiB |  00m00s
[ 91/156] Installing cpio-0:2.15-2.fc41 100% | 137.5 MiB/s |   1.1 MiB |  00m00s
[ 92/156] Installing diffutils-0:3.10-8 100% | 159.0 MiB/s |   1.6 MiB |  00m00s
[ 93/156] Installing json-c-0:0.17-4.fc 100% |  81.7 MiB/s |  83.6 KiB |  00m00s
[ 94/156] Installing libgomp-0:14.2.1-7 100% | 251.7 MiB/s | 515.6 KiB |  00m00s
[ 95/156] Installing jansson-0:2.13.1-1 100% |  87.6 MiB/s |  89.7 KiB |  00m00s
[ 96/156] Installing libpkgconf-0:2.3.0 100% |  77.5 MiB/s |  79.3 KiB |  00m00s
[ 97/156] Installing pkgconf-0:2.3.0-1. 100% |  44.5 MiB/s |  91.1 KiB |  00m00s
[ 98/156] Installing pkgconf-pkg-config 100% |   1.7 MiB/s |   1.8 KiB |  00m00s
[ 99/156] Installing keyutils-libs-0:1. 100% |  54.5 MiB/s |  55.8 KiB |  00m00s
[100/156] Installing libverto-0:0.3.2-9 100% |  30.5 MiB/s |  31.3 KiB |  00m00s
[101/156] Installing xxhash-libs-0:0.8. 100% |  87.8 MiB/s |  89.9 KiB |  00m00s
[102/156] Installing libbrotli-0:1.1.0- 100% | 205.0 MiB/s | 839.9 KiB |  00m00s
[103/156] Installing libnghttp2-0:1.62. 100% | 163.2 MiB/s | 167.1 KiB |  00m00s
[104/156] Installing libtool-ltdl-0:2.4 100% |  32.9 MiB/s |  67.3 KiB |  00m00s
[105/156] Installing coreutils-common-0 100% | 243.3 MiB/s |  11.2 MiB |  00m00s
[106/156] Installing openssl-libs-1:3.2 100% | 301.1 MiB/s |   7.8 MiB |  00m00s
[107/156] Installing coreutils-0:9.5-11 100% | 142.7 MiB/s |   5.7 MiB |  00m00s
[108/156] Installing ca-certificates-0: 100% |   2.4 MiB/s |   2.4 MiB |  00m01s
[109/156] Installing krb5-libs-0:1.21.3 100% | 165.7 MiB/s |   2.3 MiB |  00m00s
[110/156] Installing libarchive-0:3.7.4 100% | 181.4 MiB/s | 928.6 KiB |  00m00s
[111/156] Installing libtirpc-0:1.3.6-1 100% |  97.4 MiB/s | 199.4 KiB |  00m00s
[112/156] Installing gzip-0:1.13-2.fc41 100% |  77.1 MiB/s | 394.6 KiB |  00m00s
[113/156] Installing authselect-libs-0: 100% |  81.8 MiB/s | 837.2 KiB |  00m00s
[114/156] Installing cracklib-0:2.9.11- 100% |  30.6 MiB/s | 250.3 KiB |  00m00s
[115/156] Installing libpwquality-0:1.4 100% |  46.7 MiB/s | 430.1 KiB |  00m00s
[116/156] Installing libnsl2-0:2.0.1-2. 100% |  28.8 MiB/s |  59.1 KiB |  00m00s
[117/156] Installing pam-0:1.6.1-7.fc41 100% |  75.1 MiB/s |   1.9 MiB |  00m00s
[118/156] Installing libssh-0:0.10.6-8. 100% | 167.8 MiB/s | 515.4 KiB |  00m00s
[119/156] Installing rpm-sequoia-0:1.7. 100% | 268.7 MiB/s |   2.4 MiB |  00m00s
[120/156] Installing rpm-libs-0:4.20.1- 100% | 178.6 MiB/s | 731.5 KiB |  00m00s
[121/156] Installing rpm-build-libs-0:4 100% | 103.3 MiB/s | 211.5 KiB |  00m00s
[122/156] Installing libevent-0:2.1.12- 100% | 175.7 MiB/s | 899.5 KiB |  00m00s
[123/156] Installing openldap-0:2.6.9-1 100% | 126.8 MiB/s | 649.1 KiB |  00m00s
[124/156] Installing libcurl-0:8.9.1-3. 100% | 197.8 MiB/s | 810.4 KiB |  00m00s
[125/156] Installing elfutils-debuginfo 100% |  42.2 MiB/s |  86.5 KiB |  00m00s
[126/156] Installing elfutils-0:0.192-9 100% | 223.0 MiB/s |   2.7 MiB |  00m00s
[127/156] Installing binutils-0:2.43.1- 100% | 263.3 MiB/s |  27.4 MiB |  00m00s
[128/156] Installing gdb-minimal-0:16.2 100% | 301.4 MiB/s |  13.3 MiB |  00m00s
[129/156] Installing debugedit-0:5.1-4. 100% |  65.2 MiB/s | 200.4 KiB |  00m00s
[130/156] Installing curl-0:8.9.1-3.fc4 100% |  35.3 MiB/s | 796.0 KiB |  00m00s
[131/156] Installing rpm-0:4.20.1-1.fc4 100% |  83.8 MiB/s |   2.5 MiB |  00m00s
[132/156] Installing lua-srpm-macros-0: 100% |   1.9 MiB/s |   1.9 KiB |  00m00s
[133/156] Installing zig-srpm-macros-0: 100% |   1.6 MiB/s |   1.7 KiB |  00m00s
[134/156] Installing efi-srpm-macros-0: 100% |  40.2 MiB/s |  41.2 KiB |  00m00s
[135/156] Installing rust-srpm-macros-0 100% |   5.4 MiB/s |   5.6 KiB |  00m00s
[136/156] Installing qt5-srpm-macros-0: 100% |   0.0   B/s | 776.0   B |  00m00s
[137/156] Installing perl-srpm-macros-0 100% |   0.0   B/s |   1.1 KiB |  00m00s
[138/156] Installing package-notes-srpm 100% |   2.0 MiB/s |   2.0 KiB |  00m00s
[139/156] Installing openblas-srpm-macr 100% |   0.0   B/s | 392.0   B |  00m00s
[140/156] Installing ocaml-srpm-macros- 100% |   0.0   B/s |   2.2 KiB |  00m00s
[141/156] Installing kernel-srpm-macros 100% |   0.0   B/s |   2.3 KiB |  00m00s
[142/156] Installing gnat-srpm-macros-0 100% |   0.0   B/s |   1.3 KiB |  00m00s
[143/156] Installing ghc-srpm-macros-0: 100% |   0.0   B/s |   1.0 KiB |  00m00s
[144/156] Installing fpc-srpm-macros-0: 100% |   0.0   B/s | 420.0   B |  00m00s
[145/156] Installing ansible-srpm-macro 100% |  35.4 MiB/s |  36.2 KiB |  00m00s
[146/156] Installing python-srpm-macros 100% |  50.9 MiB/s |  52.2 KiB |  00m00s
[147/156] Installing fonts-srpm-macros- 100% |  55.7 MiB/s |  57.0 KiB |  00m00s
[148/156] Installing forge-srpm-macros- 100% |  39.3 MiB/s |  40.3 KiB |  00m00s
[149/156] Installing go-srpm-macros-0:3 100% |  60.5 MiB/s |  62.0 KiB |  00m00s
[150/156] Installing redhat-rpm-config- 100% |  61.9 MiB/s | 190.2 KiB |  00m00s
[151/156] Installing rpm-build-0:4.20.1 100% |  39.5 MiB/s | 202.3 KiB |  00m00s
[152/156] Installing pyproject-srpm-mac 100% |   1.2 MiB/s |   2.5 KiB |  00m00s
[153/156] Installing util-linux-0:2.40. 100% |  82.3 MiB/s |   3.7 MiB |  00m00s
[154/156] Installing authselect-0:1.5.0 100% |  31.6 MiB/s | 161.9 KiB |  00m00s
[155/156] Installing which-0:2.21-42.fc 100% |  40.2 MiB/s |  82.4 KiB |  00m00s
[156/156] Installing info-0:7.1.1-1.fc4 100% | 260.5 KiB/s | 362.2 KiB |  00m01s
Complete!
Finish: installing minimal buildroot with dnf5
Start: creating root cache
Finish: creating root cache
Finish: chroot init
INFO: Installed packages:
INFO: add-determinism-0.3.6-3.fc41.x86_64
alternatives-1.31-1.fc41.x86_64
ansible-srpm-macros-1-16.fc41.noarch
audit-libs-4.0.3-1.fc41.x86_64
authselect-1.5.0-8.fc41.x86_64
authselect-libs-1.5.0-8.fc41.x86_64
basesystem-11-21.fc41.noarch
bash-5.2.32-1.fc41.x86_64
binutils-2.43.1-5.fc41.x86_64
build-reproducibility-srpm-macros-0.3.6-3.fc41.noarch
bzip2-1.0.8-19.fc41.x86_64
bzip2-libs-1.0.8-19.fc41.x86_64
ca-certificates-2024.2.69_v8.0.401-1.0.fc41.noarch
coreutils-9.5-11.fc41.x86_64
coreutils-common-9.5-11.fc41.x86_64
cpio-2.15-2.fc41.x86_64
cracklib-2.9.11-6.fc41.x86_64
crypto-policies-20250124-1.git4d262e7.fc41.noarch
curl-8.9.1-3.fc41.x86_64
cyrus-sasl-lib-2.1.28-27.fc41.x86_64
debugedit-5.1-4.fc41.x86_64
diffutils-3.10-8.fc41.x86_64
dwz-0.15-8.fc41.x86_64
ed-1.20.2-2.fc41.x86_64
efi-srpm-macros-5-13.fc41.noarch
elfutils-0.192-9.fc41.x86_64
elfutils-debuginfod-client-0.192-9.fc41.x86_64
elfutils-default-yama-scope-0.192-9.fc41.noarch
elfutils-libelf-0.192-9.fc41.x86_64
elfutils-libs-0.192-9.fc41.x86_64
fedora-gpg-keys-41-1.noarch
fedora-release-41-31.noarch
fedora-release-common-41-31.noarch
fedora-release-identity-basic-41-31.noarch
fedora-repos-41-1.noarch
file-5.45-7.fc41.x86_64
file-libs-5.45-7.fc41.x86_64
filesystem-3.18-23.fc41.x86_64
findutils-4.10.0-4.fc41.x86_64
fonts-srpm-macros-2.0.5-17.fc41.noarch
forge-srpm-macros-0.4.0-1.fc41.noarch
fpc-srpm-macros-1.3-13.fc41.noarch
gawk-5.3.0-4.fc41.x86_64
gdb-minimal-16.2-2.fc41.x86_64
gdbm-1.23-7.fc41.x86_64
gdbm-libs-1.23-7.fc41.x86_64
ghc-srpm-macros-1.9.1-2.fc41.noarch
glibc-2.40-24.fc41.x86_64
glibc-common-2.40-24.fc41.x86_64
glibc-gconv-extra-2.40-24.fc41.x86_64
glibc-minimal-langpack-2.40-24.fc41.x86_64
gmp-6.3.0-2.fc41.x86_64
gnat-srpm-macros-6-6.fc41.noarch
go-srpm-macros-3.6.0-5.fc41.noarch
gpg-pubkey-e99d6ad1-64d2612c
grep-3.11-9.fc41.x86_64
gzip-1.13-2.fc41.x86_64
info-7.1.1-1.fc41.x86_64
jansson-2.13.1-10.fc41.x86_64
json-c-0.17-4.fc41.x86_64
kernel-srpm-macros-1.0-24.fc41.noarch
keyutils-libs-1.6.3-4.fc41.x86_64
krb5-libs-1.21.3-4.fc41.x86_64
libacl-2.3.2-2.fc41.x86_64
libarchive-3.7.4-4.fc41.x86_64
libattr-2.5.2-4.fc41.x86_64
libblkid-2.40.4-1.fc41.x86_64
libbrotli-1.1.0-5.fc41.x86_64
libcap-2.70-4.fc41.x86_64
libcap-ng-0.8.5-3.fc41.x86_64
libcom_err-1.47.1-6.fc41.x86_64
libcurl-8.9.1-3.fc41.x86_64
libeconf-0.6.2-3.fc41.x86_64
libevent-2.1.12-14.fc41.x86_64
libfdisk-2.40.4-1.fc41.x86_64
libffi-3.4.6-3.fc41.x86_64
libgcc-14.2.1-7.fc41.x86_64
libgomp-14.2.1-7.fc41.x86_64
libidn2-2.3.8-1.fc41.x86_64
libmount-2.40.4-1.fc41.x86_64
libnghttp2-1.62.1-2.fc41.x86_64
libnsl2-2.0.1-2.fc41.x86_64
libpkgconf-2.3.0-1.fc41.x86_64
libpsl-0.21.5-4.fc41.x86_64
libpwquality-1.4.5-11.fc41.x86_64
libselinux-3.7-5.fc41.x86_64
libsemanage-3.7-2.fc41.x86_64
libsepol-3.7-2.fc41.x86_64
libsmartcols-2.40.4-1.fc41.x86_64
libssh-0.10.6-8.fc41.x86_64
libssh-config-0.10.6-8.fc41.noarch
libstdc++-14.2.1-7.fc41.x86_64
libtasn1-4.20.0-1.fc41.x86_64
libtirpc-1.3.6-1.rc3.fc41.x86_64
libtool-ltdl-2.4.7-12.fc41.x86_64
libunistring-1.1-8.fc41.x86_64
libutempter-1.2.1-15.fc41.x86_64
libuuid-2.40.4-1.fc41.x86_64
libverto-0.3.2-9.fc41.x86_64
libxcrypt-4.4.38-7.fc41.x86_64
libxml2-2.12.10-1.fc41.x86_64
libzstd-1.5.7-1.fc41.x86_64
lua-libs-5.4.7-3.fc41.x86_64
lua-srpm-macros-1-14.fc41.noarch
lz4-libs-1.10.0-1.fc41.x86_64
mpfr-4.2.1-5.fc41.x86_64
ncurses-base-6.5-2.20240629.fc41.noarch
ncurses-libs-6.5-2.20240629.fc41.x86_64
ocaml-srpm-macros-10-3.fc41.noarch
openblas-srpm-macros-2-18.fc41.noarch
openldap-2.6.9-1.fc41.x86_64
openssl-libs-3.2.4-1.fc41.x86_64
p11-kit-0.25.5-3.fc41.x86_64
p11-kit-trust-0.25.5-3.fc41.x86_64
package-notes-srpm-macros-0.5-12.fc41.noarch
pam-1.6.1-7.fc41.x86_64
pam-libs-1.6.1-7.fc41.x86_64
patch-2.7.6-25.fc41.x86_64
pcre2-10.44-1.fc41.1.x86_64
pcre2-syntax-10.44-1.fc41.1.noarch
perl-srpm-macros-1-56.fc41.noarch
pkgconf-2.3.0-1.fc41.x86_64
pkgconf-m4-2.3.0-1.fc41.noarch
pkgconf-pkg-config-2.3.0-1.fc41.x86_64
popt-1.19-7.fc41.x86_64
publicsuffix-list-dafsa-20250116-1.fc41.noarch
pyproject-srpm-macros-1.18.1-1.fc41.noarch
python-srpm-macros-3.13-3.fc41.noarch
qt5-srpm-macros-5.15.15-1.fc41.noarch
qt6-srpm-macros-6.8.2-1.fc41.noarch
readline-8.2-10.fc41.x86_64
redhat-rpm-config-294-1.fc41.noarch
rpm-4.20.1-1.fc41.x86_64
rpm-build-4.20.1-1.fc41.x86_64
rpm-build-libs-4.20.1-1.fc41.x86_64
rpm-libs-4.20.1-1.fc41.x86_64
rpm-sequoia-1.7.0-5.fc41.x86_64
rust-srpm-macros-26.3-3.fc41.noarch
sed-4.9-3.fc41.x86_64
setup-2.15.0-8.fc41.noarch
shadow-utils-4.15.1-12.fc41.x86_64
sqlite-libs-3.46.1-2.fc41.x86_64
systemd-libs-256.12-1.fc41.x86_64
tar-1.35-4.fc41.x86_64
unzip-6.0-64.fc41.x86_64
util-linux-2.40.4-1.fc41.x86_64
util-linux-core-2.40.4-1.fc41.x86_64
which-2.21-42.fc41.x86_64
xxhash-libs-0.8.3-1.fc41.x86_64
xz-5.6.2-2.fc41.x86_64
xz-libs-5.6.2-2.fc41.x86_64
zig-srpm-macros-1-3.fc41.noarch
zip-3.0-41.fc41.x86_64
zlib-ng-compat-2.2.3-2.fc41.x86_64
zstd-1.5.7-1.fc41.x86_64
Start: buildsrpm
Start: rpmbuild -bs
Building target platforms: x86_64
Building for target x86_64
warning: %source_date_epoch_from_changelog is set, but %changelog has no entries to take a date from
Wrote: /builddir/build/SRPMS/R-CRAN-Seurat-5.3.0-1.fc41.copr8957487.src.rpm

RPM build warnings:
    %source_date_epoch_from_changelog is set, but %changelog has no entries to take a date from
Finish: rpmbuild -bs
INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan
INFO: /var/lib/mock/fedora-41-x86_64-1745459939.298449/root/var/log/dnf5.log
INFO: chroot_scan: creating tarball /var/lib/copr-rpmbuild/results/chroot_scan.tar.gz
/bin/tar: Removing leading `/' from member names
Finish: buildsrpm
INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-10g91l_b/R-CRAN-Seurat/R-CRAN-Seurat.spec) Config(child) 0 minutes 13 seconds
INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results
INFO: Cleaning up build root ('cleanup_on_success=True')
Start: clean chroot
INFO: unmounting tmpfs.
Finish: clean chroot
INFO: Start(/var/lib/copr-rpmbuild/results/R-CRAN-Seurat-5.3.0-1.fc41.copr8957487.src.rpm)  Config(fedora-41-x86_64)
Start: chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-41-x86_64-1745459939.298449/root.
INFO: calling preinit hooks
INFO: enabled root cache
Start: unpacking root cache
Finish: unpacking root cache
INFO: enabled package manager cache
Start: cleaning package manager metadata
Finish: cleaning package manager metadata
INFO: enabled HW Info plugin
INFO: Buildroot is handled by package management from host and used with --installroot:
  rpm-4.20.1-1.fc41.x86_64
  rpm-sequoia-1.7.0-2.fc41.x86_64
  python3-dnf-4.23.0-1.fc41.noarch
  python3-dnf-plugins-core-4.10.1-1.fc41.noarch
  dnf5-5.2.12.0-2.fc41.x86_64
  dnf5-plugins-5.2.12.0-2.fc41.x86_64
Finish: chroot init
Start: build phase for R-CRAN-Seurat-5.3.0-1.fc41.copr8957487.src.rpm
Start: build setup for R-CRAN-Seurat-5.3.0-1.fc41.copr8957487.src.rpm
Building target platforms: x86_64
Building for target x86_64
warning: %source_date_epoch_from_changelog is set, but %changelog has no entries to take a date from
Wrote: /builddir/build/SRPMS/R-CRAN-Seurat-5.3.0-1.fc41.copr8957487.src.rpm

RPM build warnings:
    %source_date_epoch_from_changelog is set, but %changelog has no entries to take a date from
Updating and loading repositories:
 updates                                100% |   1.1 MiB/s |  30.9 KiB |  00m00s
 fedora                                 100% |   1.3 MiB/s |  31.0 KiB |  00m00s
 Copr repository                        100% |  48.1 KiB/s |   1.5 KiB |  00m00s
Repositories loaded.
Package                      Arch   Version                          Repository      Size
Installing:
 R-CRAN-KernSmooth           x86_64 2.23.26-1.fc41.copr8462471       copr_base  150.3 KiB
 R-CRAN-MASS                 x86_64 7.3.65-1.fc41.copr8711526        copr_base    1.8 MiB
 R-CRAN-Matrix               x86_64 1.7.3-1.fc41.copr8752527         copr_base    8.2 MiB
 R-CRAN-RANN                 x86_64 2.6.2-1.fc41.copr7942082         copr_base   95.5 KiB
 R-CRAN-RColorBrewer         noarch 1.1.3-1.fc41.copr7349948         copr_base   63.6 KiB
 R-CRAN-ROCR                 noarch 1.0.11-1.fc41.copr8100271        copr_base  612.1 KiB
 R-CRAN-RSpectra             x86_64 0.16.2-1.fc41.copr7752181        copr_base    1.3 MiB
 R-CRAN-Rcpp                 x86_64 1.0.14-1.fc41.copr8507898        copr_base    8.4 MiB
 R-CRAN-RcppAnnoy            x86_64 0.0.22-1.fc41.copr8100011        copr_base  668.8 KiB
 R-CRAN-RcppEigen            x86_64 0.3.4.0.2-1.fc41.copr8100507     copr_base    9.0 MiB
 R-CRAN-RcppHNSW             x86_64 0.6.0-1.fc41.copr7354842         copr_base  587.6 KiB
 R-CRAN-RcppProgress         noarch 0.4.2-3.fc41.copr7350251         copr_base   49.9 KiB
 R-CRAN-Rtsne                x86_64 0.17-1.fc41.copr8100532          copr_base  258.1 KiB
 R-CRAN-SeuratObject         x86_64 5.1.0-1.fc41.copr8953806         copr_base    3.0 MiB
 R-CRAN-cluster              x86_64 2.1.8.1-1.fc41.copr8760231       copr_base    1.0 MiB
 R-CRAN-cowplot              noarch 1.1.3-1.fc41.copr7362489         copr_base    2.1 MiB
 R-CRAN-fastDummies          noarch 1.7.5-1.fc41.copr8554247         copr_base  114.1 KiB
 R-CRAN-fitdistrplus         noarch 1.2.2-1.fc41.copr8483397         copr_base    3.7 MiB
 R-CRAN-future               noarch 1.40.0-1.fc41.copr8889331        copr_base    1.6 MiB
 R-CRAN-future.apply         noarch 1.11.3-1.fc41.copr8181593        copr_base  234.7 KiB
 R-CRAN-generics             noarch 0.1.3-1.fc41.copr7350006         copr_base  160.2 KiB
 R-CRAN-ggplot2              noarch 3.5.2-1.fc41.copr8883281         copr_base    7.2 MiB
 R-CRAN-ggrepel              x86_64 0.9.6-1.fc41.copr7995994         copr_base  454.2 KiB
 R-CRAN-ggridges             noarch 0.5.6-1.fc41.copr7362419         copr_base    3.0 MiB
 R-CRAN-httr                 noarch 1.4.7-1.fc41.copr7357937         copr_base  752.3 KiB
 R-CRAN-ica                  noarch 1.0.3-1.fc41.copr7351152         copr_base  125.3 KiB
 R-CRAN-igraph               x86_64 2.1.4-1.fc41.copr8565846         copr_base   10.2 MiB
 R-CRAN-irlba                x86_64 2.3.5.1-1.fc41.copr7356083       copr_base  354.8 KiB
 R-CRAN-jsonlite             x86_64 2.0.0-1.fc41.copr8829035         copr_base    2.3 MiB
 R-CRAN-leidenbase           x86_64 0.1.35-1.fc41.copr8854189        copr_base  561.7 KiB
 R-CRAN-lifecycle            noarch 1.0.4-1.fc41.copr7354340         copr_base  282.7 KiB
 R-CRAN-lmtest               x86_64 0.9.40-1.fc41.copr7356084        copr_base  565.6 KiB
 R-CRAN-matrixStats          x86_64 1.5.0-1.fc41.copr8483412         copr_base    1.0 MiB
 R-CRAN-miniUI               noarch 0.1.2-1.fc41.copr8917759         copr_base   55.6 KiB
 R-CRAN-patchwork            noarch 1.3.0-1.fc41.copr8025740         copr_base    4.1 MiB
 R-CRAN-pbapply              noarch 1.7.2-1.fc41.copr7350039         copr_base  146.0 KiB
 R-CRAN-plotly               noarch 4.10.4-1.fc41.copr7364942        copr_base    6.7 MiB
 R-CRAN-png                  x86_64 0.1.8-1.fc41.copr7350042         copr_base   70.1 KiB
 R-CRAN-progressr            noarch 0.15.1-1.fc41.copr8305275        copr_base    1.5 MiB
 R-CRAN-reticulate           x86_64 1.42.0-1.fc41.copr8821907        copr_base    3.0 MiB
 R-CRAN-rlang                x86_64 1.1.6-1.fc41.copr8893495         copr_base    2.6 MiB
 R-CRAN-scales               noarch 1.3.0-1.fc41.copr7356067         copr_base    1.1 MiB
 R-CRAN-scattermore          x86_64 1.2-1.fc41.copr7363483           copr_base  542.1 KiB
 R-CRAN-sctransform          x86_64 0.4.1-1.fc41.copr7363012         copr_base  741.2 KiB
 R-CRAN-shiny                noarch 1.10.0-1.fc41.copr8391677        copr_base   13.6 MiB
 R-CRAN-spatstat.explore     x86_64 3.4.2-1.fc41.copr8803598         copr_base    5.3 MiB
 R-CRAN-spatstat.geom        x86_64 3.3.6-1.fc41.copr8791059         copr_base    6.5 MiB
 R-CRAN-tibble               x86_64 3.2.1-1.fc41.copr7359525         copr_base    1.7 MiB
 R-CRAN-uwot                 x86_64 0.2.3-1.fc41.copr8696920         copr_base    1.9 MiB
 R-core                      x86_64 4.4.3-1.fc41                     updates    102.9 MiB
 R-devel                     x86_64 4.4.3-1.fc41                     updates      0.0   B
Installing dependencies:
 R-CRAN-FNN                  x86_64 1.1.4.1-1.fc41.copr8059699       copr_base  235.9 KiB
 R-CRAN-R6                   noarch 2.6.1-1.fc41.copr8657185         copr_base  123.3 KiB
 R-CRAN-RcppTOML             x86_64 0.2.3-1.fc41.copr8743200         copr_base  903.4 KiB
 R-CRAN-abind                noarch 1.4.8-1.fc41.copr8016475         copr_base   96.2 KiB
 R-CRAN-askpass              x86_64 1.2.1-1.fc41.copr8109609         copr_base   40.5 KiB
 R-CRAN-base64enc            x86_64 0.1.3-1.fc41.copr8873392         copr_base   56.2 KiB
 R-CRAN-bitops               x86_64 1.0.9-1.fc41.copr8106788         copr_base   61.8 KiB
 R-CRAN-bslib                noarch 0.9.0-1.fc41.copr8588797         copr_base   10.9 MiB
 R-CRAN-caTools              x86_64 1.18.3-1.fc41.copr7984365        copr_base  364.5 KiB
 R-CRAN-cachem               x86_64 1.1.0-1.fc41.copr7452047         copr_base  104.7 KiB
 R-CRAN-cli                  x86_64 3.6.5-1.fc41.copr8957462         copr_base    2.4 MiB
 R-CRAN-codetools            noarch 0.2.20-1.fc41.copr7352636        copr_base  106.3 KiB
 R-CRAN-colorspace           x86_64 2.1.1-1.fc41.copr7795131         copr_base    4.0 MiB
 R-CRAN-commonmark           x86_64 1.9.5-1.fc41.copr8779207         copr_base  321.3 KiB
 R-CRAN-crayon               noarch 1.5.3-1.fc41.copr7633037         copr_base  235.8 KiB
 R-CRAN-crosstalk            noarch 1.2.1-1.fc41.copr7356073         copr_base    1.0 MiB
 R-CRAN-curl                 x86_64 6.2.2-1.fc41.copr8815213         copr_base    2.1 MiB
 R-CRAN-data.table           x86_64 1.17.0-1.fc41.copr8683049        copr_base    5.2 MiB
 R-CRAN-deldir               x86_64 2.0.4-1.fc41.copr7349981         copr_base  455.3 KiB
 R-CRAN-digest               x86_64 0.6.37-1.fc41.copr7936834        copr_base  495.7 KiB
 R-CRAN-dotCall64            x86_64 1.2-1.fc41.copr8109551           copr_base   77.1 KiB
 R-CRAN-dplyr                x86_64 1.1.4-1.fc41.copr7361225         copr_base    2.6 MiB
 R-CRAN-evaluate             noarch 1.0.3-1.fc41.copr8500754         copr_base  147.9 KiB
 R-CRAN-fansi                x86_64 1.0.6-1.fc41.copr7349952         copr_base  625.8 KiB
 R-CRAN-farver               x86_64 2.1.2-1.fc41.copr7442181         copr_base    2.1 MiB
 R-CRAN-fastmap              x86_64 1.2.0-1.fc41.copr7447859         copr_base  108.5 KiB
 R-CRAN-fontawesome          noarch 0.5.3-1.fc41.copr8272230         copr_base    2.0 MiB
 R-CRAN-fs                   x86_64 1.6.6-1.fc41.copr8896446         copr_base  597.2 KiB
 R-CRAN-globals              noarch 0.17.0-1.fc41.copr8912304        copr_base  209.5 KiB
 R-CRAN-glue                 x86_64 1.8.0-1.fc41.copr8094211         copr_base  345.1 KiB
 R-CRAN-goftest              x86_64 1.2.3-1.fc41.copr7350009         copr_base   97.8 KiB
 R-CRAN-gplots               noarch 3.2.0-1.fc41.copr8111048         copr_base  783.0 KiB
 R-CRAN-gridExtra            noarch 2.3-3.fc41.copr7357925           copr_base    1.6 MiB
 R-CRAN-gtable               noarch 0.3.6-1.fc41.copr8178682         copr_base  337.9 KiB
 R-CRAN-gtools               x86_64 3.9.5-1.fc41.copr7349932         copr_base  534.9 KiB
 R-CRAN-here                 noarch 1.0.1-1.fc41.copr7353623         copr_base  138.9 KiB
 R-CRAN-highr                noarch 0.11-1.fc41.copr7494448          copr_base   65.2 KiB
 R-CRAN-htmltools            x86_64 0.5.8.1-1.fc41.copr7353596       copr_base  522.9 KiB
 R-CRAN-htmlwidgets          noarch 1.6.4-1.fc41.copr7361223         copr_base    2.0 MiB
 R-CRAN-httpuv               x86_64 1.6.16-1.fc41.copr8912306        copr_base    1.1 MiB
 R-CRAN-isoband              x86_64 0.2.7-1.fc41.copr7351195         copr_base    1.9 MiB
 R-CRAN-jquerylib            noarch 0.1.4-1.fc41.copr7357136         copr_base    1.5 MiB
 R-CRAN-knitr                noarch 1.50-1.fc41.copr8772308          copr_base    1.7 MiB
 R-CRAN-labeling             noarch 0.4.3-1.fc41.copr7349947         copr_base   92.7 KiB
 R-CRAN-later                x86_64 1.4.2-1.fc41.copr8875702         copr_base  313.7 KiB
 R-CRAN-lattice              x86_64 0.22.7-1.fc41.copr8854188        copr_base    2.0 MiB
 R-CRAN-lazyeval             x86_64 0.2.2-3.fc41.copr7349927         copr_base  362.3 KiB
 R-CRAN-listenv              noarch 0.9.1-1.fc41.copr7349926         copr_base  157.8 KiB
 R-CRAN-magrittr             x86_64 2.0.3-1.fc41.copr7349936         copr_base  417.3 KiB
 R-CRAN-memoise              noarch 2.0.1-1.fc41.copr7356088         copr_base   83.7 KiB
 R-CRAN-mgcv                 x86_64 1.9.3-1.fc41.copr8862336         copr_base    4.8 MiB
 R-CRAN-mime                 x86_64 0.13-1.fc41.copr8779224          copr_base   66.1 KiB
 R-CRAN-munsell              noarch 0.5.1-1.fc41.copr7353599         copr_base  379.0 KiB
 R-CRAN-nlme                 x86_64 3.1.168-1.fc41.copr8842786       copr_base    3.8 MiB
 R-CRAN-openssl              x86_64 2.3.2-1.fc41.copr8637656         copr_base    3.2 MiB
 R-CRAN-parallelly           x86_64 1.43.0-1.fc41.copr8815240        copr_base  912.4 KiB
 R-CRAN-pillar               noarch 1.10.2-1.fc41.copr8864268        copr_base    1.4 MiB
 R-CRAN-pkgconfig            noarch 2.0.3-3.fc41.copr7349937         copr_base   34.0 KiB
 R-CRAN-plyr                 x86_64 1.8.9-1.fc41.copr7353597         copr_base    1.1 MiB
 R-CRAN-polyclip             x86_64 1.10.7-1.fc41.copr7778695        copr_base  240.5 KiB
 R-CRAN-promises             x86_64 1.3.2-1.fc41.copr8324802         copr_base    2.6 MiB
 R-CRAN-purrr                x86_64 1.0.4-1.fc41.copr8637655         copr_base  926.2 KiB
 R-CRAN-rappdirs             x86_64 0.3.3-1.fc41.copr8099955         copr_base   87.3 KiB
 R-CRAN-reshape2             x86_64 1.4.4-3.fc41.copr7359520         copr_base  215.1 KiB
 R-CRAN-rmarkdown            noarch 2.29-1.fc41.copr8210728          copr_base    6.8 MiB
 R-CRAN-rprojroot            noarch 2.0.4-1.fc41.copr7349963         copr_base  198.2 KiB
 R-CRAN-sass                 x86_64 0.4.10-1.fc41.copr8893516        copr_base    4.2 MiB
 R-CRAN-sourcetools          x86_64 0.1.7.1-1.fc41.copr7349949       copr_base  133.5 KiB
 R-CRAN-sp                   x86_64 2.2.0-1.fc41.copr8595870         copr_base    9.4 MiB
 R-CRAN-spam                 x86_64 2.11.1-1.fc41.copr8554266        copr_base    3.6 MiB
 R-CRAN-spatstat.data        noarch 3.1.6-1.fc41.copr8779240         copr_base    4.4 MiB
 R-CRAN-spatstat.random      x86_64 3.3.3-1.fc41.copr8796127         copr_base    1.9 MiB
 R-CRAN-spatstat.sparse      x86_64 3.1.0-1.fc41.copr7649866         copr_base  308.8 KiB
 R-CRAN-spatstat.univar      x86_64 3.1.2-1.fc41.copr8731808         copr_base  554.0 KiB
 R-CRAN-spatstat.utils       x86_64 3.1.3-1.fc41.copr8771110         copr_base  630.5 KiB
 R-CRAN-stringi              x86_64 1.8.7-1.fc41.copr8829056         copr_base    2.0 MiB
 R-CRAN-stringr              noarch 1.5.1-1.fc41.copr7357924         copr_base  646.8 KiB
 R-CRAN-survival             x86_64 3.8.3-1.fc41.copr8405722         copr_base    9.9 MiB
 R-CRAN-sys                  x86_64 3.4.3-1.fc41.copr8109592         copr_base   79.9 KiB
 R-CRAN-tensor               noarch 1.5-3.fc41.copr7350073           copr_base   20.4 KiB
 R-CRAN-tidyr                x86_64 1.3.1-1.fc41.copr7362421         copr_base    1.8 MiB
 R-CRAN-tidyselect           noarch 1.2.1-1.fc41.copr7357928         copr_base  433.3 KiB
 R-CRAN-tinytex              noarch 0.57-1.fc41.copr8908340          copr_base  191.7 KiB
 R-CRAN-utf8                 x86_64 1.2.4-1.fc41.copr7349954         copr_base  470.9 KiB
 R-CRAN-vctrs                x86_64 0.6.5-1.fc41.copr7356070         copr_base    2.3 MiB
 R-CRAN-viridisLite          noarch 0.4.2-1.fc41.copr7349928         copr_base    1.3 MiB
 R-CRAN-withr                noarch 3.0.2-1.fc41.copr8184963         copr_base  396.0 KiB
 R-CRAN-xfun                 x86_64 0.52-1.fc41.copr8854229          copr_base    1.0 MiB
 R-CRAN-xtable               noarch 1.8.4-3.fc41.copr7349933         copr_base  895.3 KiB
 R-CRAN-yaml                 x86_64 2.3.10-1.fc41.copr7795167        copr_base  276.1 KiB
 R-CRAN-zoo                  x86_64 1.8.14-1.fc41.copr8889371        copr_base    1.5 MiB
 R-core-devel                x86_64 4.4.3-1.fc41                     updates    396.1 KiB
 R-java                      x86_64 4.4.3-1.fc41                     updates      0.0   B
 R-java-devel                x86_64 4.4.3-1.fc41                     updates      0.0   B
 R-littler                   x86_64 0.3.19-5.fc41                    fedora     158.1 KiB
 R-rpm-macros                noarch 1.2.1-11.fc41                    fedora       5.6 KiB
 abattis-cantarell-vf-fonts  noarch 0.301-13.fc41                    fedora     192.7 KiB
 alsa-lib                    x86_64 1.2.14-2.fc41                    updates      1.4 MiB
 annobin-docs                noarch 12.69-1.fc41                     fedora      97.7 KiB
 annobin-plugin-gcc          x86_64 12.69-1.fc41                     fedora     985.0 KiB
 avahi-libs                  x86_64 0.8-29.fc41                      fedora     166.3 KiB
 bzip2-devel                 x86_64 1.0.8-19.fc41                    fedora     309.8 KiB
 cairo                       x86_64 1.18.2-2.fc41                    updates      1.7 MiB
 cmake-filesystem            x86_64 3.30.8-1.fc41                    updates      0.0   B
 cpp                         x86_64 14.2.1-7.fc41                    updates     34.5 MiB
 cups-filesystem             noarch 1:2.4.12-2.fc41                  updates      0.0   B
 cups-libs                   x86_64 1:2.4.12-2.fc41                  updates    622.9 KiB
 dbus-libs                   x86_64 1:1.14.10-4.fc41                 fedora     368.9 KiB
 default-fonts-core-sans     noarch 4.1-2.fc41                       fedora      11.9 KiB
 desktop-file-utils          x86_64 0.27-2.fc41                      fedora     230.4 KiB
 emacs-filesystem            noarch 1:30.0-3.fc41                    fedora       0.0   B
 flexiblas                   x86_64 3.4.5-1.fc41                     updates     50.4 KiB
 flexiblas-devel             x86_64 3.4.5-1.fc41                     updates      4.9 MiB
 flexiblas-netlib            x86_64 3.4.5-1.fc41                     updates     10.9 MiB
 flexiblas-netlib64          x86_64 3.4.5-1.fc41                     updates     10.9 MiB
 flexiblas-openblas-openmp   x86_64 3.4.5-1.fc41                     updates     43.3 KiB
 flexiblas-openblas-openmp64 x86_64 3.4.5-1.fc41                     updates     43.3 KiB
 fontconfig                  x86_64 2.15.0-8.fc41                    fedora     791.9 KiB
 fonts-filesystem            noarch 1:2.0.5-17.fc41                  fedora       0.0   B
 freetype                    x86_64 2.13.3-1.fc41                    fedora     850.5 KiB
 fribidi                     x86_64 1.0.15-2.fc41                    fedora     368.4 KiB
 gcc                         x86_64 14.2.1-7.fc41                    updates    103.4 MiB
 gcc-c++                     x86_64 14.2.1-7.fc41                    updates     37.7 MiB
 gcc-gfortran                x86_64 14.2.1-7.fc41                    updates     36.8 MiB
 gcc-plugin-annobin          x86_64 14.2.1-7.fc41                    updates     59.6 KiB
 glib2                       x86_64 2.82.5-1.fc41                    updates     14.7 MiB
 glibc-devel                 x86_64 2.40-24.fc41                     updates      2.3 MiB
 glpk                        x86_64 5.0-12.fc41                      fedora     878.8 KiB
 gnutls                      x86_64 3.8.9-2.fc41                     updates      3.6 MiB
 google-noto-fonts-common    noarch 20240701-2.fc41                  fedora      17.5 KiB
 google-noto-sans-vf-fonts   noarch 20240701-2.fc41                  fedora       1.2 MiB
 graphite2                   x86_64 1.3.14-16.fc41                   fedora     192.0 KiB
 harfbuzz                    x86_64 9.0.0-3.fc41                     fedora       2.6 MiB
 java-21-openjdk             x86_64 1:21.0.6.0.7-6.fc41              updates      1.0 MiB
 java-21-openjdk-devel       x86_64 1:21.0.6.0.7-6.fc41              updates     11.2 MiB
 java-21-openjdk-headless    x86_64 1:21.0.6.0.7-6.fc41              updates    201.8 MiB
 javapackages-filesystem     noarch 6.2.0-14.fc41                    fedora       1.9 KiB
 jbigkit-libs                x86_64 2.1-30.fc41                      fedora     117.6 KiB
 kernel-headers              x86_64 6.13.3-200.fc41                  updates      6.5 MiB
 less                        x86_64 668-1.fc41                       updates    406.3 KiB
 libICE                      x86_64 1.1.2-1.fc41                     updates    196.2 KiB
 libRmath                    x86_64 4.4.3-1.fc41                     updates    250.8 KiB
 libRmath-devel              x86_64 4.4.3-1.fc41                     updates     17.4 KiB
 libSM                       x86_64 1.2.5-1.fc41                     updates     99.6 KiB
 libX11                      x86_64 1.8.11-1.fc41                    updates      1.3 MiB
 libX11-common               noarch 1.8.11-1.fc41                    updates      1.2 MiB
 libX11-devel                x86_64 1.8.11-1.fc41                    updates      1.0 MiB
 libX11-xcb                  x86_64 1.8.11-1.fc41                    updates     15.0 KiB
 libXau                      x86_64 1.0.11-7.fc41                    fedora      66.9 KiB
 libXau-devel                x86_64 1.0.11-7.fc41                    fedora       6.4 KiB
 libXcomposite               x86_64 0.4.6-4.fc41                     fedora      44.5 KiB
 libXext                     x86_64 1.3.6-2.fc41                     fedora      90.1 KiB
 libXft                      x86_64 2.3.8-7.fc41                     fedora     164.5 KiB
 libXi                       x86_64 1.8.2-1.fc41                     fedora      76.7 KiB
 libXmu                      x86_64 1.2.1-2.fc41                     fedora     191.5 KiB
 libXrender                  x86_64 0.9.12-1.fc41                    updates     48.8 KiB
 libXt                       x86_64 1.3.1-1.fc41                     updates    429.9 KiB
 libXtst                     x86_64 1.2.5-1.fc41                     fedora      33.6 KiB
 libdatrie                   x86_64 0.2.13-10.fc41                   fedora      57.9 KiB
 libdeflate                  x86_64 1.23-1.fc41                      updates    117.2 KiB
 libdeflate-devel            x86_64 1.23-1.fc41                      updates     25.9 KiB
 libfontenc                  x86_64 1.1.8-2.fc41                     fedora      67.0 KiB
 libgfortran                 x86_64 14.2.1-7.fc41                    updates      3.0 MiB
 libicu                      x86_64 74.2-2.fc41                      fedora      34.9 MiB
 libicu-devel                x86_64 74.2-2.fc41                      fedora       5.6 MiB
 libjpeg-turbo               x86_64 3.0.2-3.fc41                     fedora     776.9 KiB
 liblerc                     x86_64 4.0.0-7.fc41                     fedora     607.5 KiB
 libmpc                      x86_64 1.3.1-6.fc41                     fedora     164.7 KiB
 libpng                      x86_64 2:1.6.40-4.fc41                  fedora     245.8 KiB
 libquadmath                 x86_64 14.2.1-7.fc41                    updates    323.5 KiB
 libquadmath-devel           x86_64 14.2.1-7.fc41                    updates     21.9 KiB
 libstdc++-devel             x86_64 14.2.1-7.fc41                    updates     15.4 MiB
 libthai                     x86_64 0.1.29-9.fc41                    fedora     783.5 KiB
 libtiff                     x86_64 4.6.0-6.fc41                     fedora     606.0 KiB
 libtirpc-devel              x86_64 1.3.6-1.rc3.fc41                 updates    251.6 KiB
 libwebp                     x86_64 1.5.0-1.fc41                     updates    814.4 KiB
 libxcb                      x86_64 1.17.0-3.fc41                    fedora       1.2 MiB
 libxcb-devel                x86_64 1.17.0-3.fc41                    fedora       2.7 MiB
 libxcrypt-devel             x86_64 4.4.38-7.fc41                    updates     30.8 KiB
 lksctp-tools                x86_64 1.0.20-1.fc41                    updates    267.0 KiB
 make                        x86_64 1:4.4.1-8.fc41                   fedora       1.8 MiB
 mkfontscale                 x86_64 1.2.3-1.fc41                     fedora      49.2 KiB
 nettle                      x86_64 3.10-3.fc41                      fedora     793.0 KiB
 nspr                        x86_64 4.36.0-4.fc41                    updates    320.4 KiB
 nss                         x86_64 3.109.0-1.fc41                   updates      1.9 MiB
 nss-softokn                 x86_64 3.109.0-1.fc41                   updates      1.9 MiB
 nss-softokn-freebl          x86_64 3.109.0-1.fc41                   updates    845.1 KiB
 nss-sysinit                 x86_64 3.109.0-1.fc41                   updates     22.2 KiB
 nss-util                    x86_64 3.109.0-1.fc41                   updates    205.1 KiB
 openblas                    x86_64 0.3.26-5.fc41                    fedora      96.0 KiB
 openblas-openmp             x86_64 0.3.26-5.fc41                    fedora      39.4 MiB
 openblas-openmp64           x86_64 0.3.26-5.fc41                    fedora      39.5 MiB
 pango                       x86_64 1.56.3-1.fc41                    updates      1.0 MiB
 pcre2-devel                 x86_64 10.44-1.fc41.1                   fedora       2.0 MiB
 pcre2-utf16                 x86_64 10.44-1.fc41.1                   fedora     590.1 KiB
 pcre2-utf32                 x86_64 10.44-1.fc41.1                   fedora     562.0 KiB
 pixman                      x86_64 0.44.2-1.fc41                    updates    664.5 KiB
 suitesparse                 x86_64 7.7.0-2.fc41                     fedora     139.9 MiB
 tcl                         x86_64 1:8.6.14-5.fc41                  updates      4.2 MiB
 tk                          x86_64 1:8.6.14-2.fc41                  fedora       3.6 MiB
 tre                         x86_64 0.8.0-45.20140228gitc2f5d13.fc41 fedora      75.9 KiB
 tre-common                  noarch 0.8.0-45.20140228gitc2f5d13.fc41 fedora      81.0 KiB
 tre-devel                   x86_64 0.8.0-45.20140228gitc2f5d13.fc41 fedora      10.7 KiB
 ttmkfdir                    x86_64 3.0.9-71.fc41                    fedora     122.7 KiB
 tzdata-java                 noarch 2025b-1.fc41                     updates    100.1 KiB
 xdg-utils                   noarch 1.2.1-2.fc41                     fedora     346.3 KiB
 xml-common                  noarch 0.6.3-65.fc41                    fedora      78.4 KiB
 xorg-x11-fonts-Type1        noarch 7.5-39.fc41                      fedora     863.3 KiB
 xorg-x11-proto-devel        noarch 2024.1-3.fc41                    fedora       1.7 MiB
 xz-devel                    x86_64 1:5.6.2-2.fc41                   fedora     255.6 KiB
 zlib-ng-compat-devel        x86_64 2.2.3-2.fc41                     updates    107.0 KiB

Transaction Summary:
 Installing:       262 packages

Total size of inbound packages is 403 MiB. Need to download 108 MiB.
After this operation, 1 GiB extra will be used (install 1 GiB, remove 0 B).
[  1/262] R-CRAN-MASS-0:7.3.65-1.fc41.c 100% |   0.0   B/s |   0.0   B |  00m00s
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[ 14/262] R-littler-0:0.3.19-5.fc41.x86 100% |   0.0   B/s |   0.0   B |  00m00s
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[ 15/262] R-CRAN-gtable-0:0.3.6-1.fc41. 100% |   0.0   B/s |   0.0   B |  00m00s
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[ 20/262] R-CRAN-vctrs-0:0.6.5-1.fc41.c 100% |   0.0   B/s |   0.0   B |  00m00s
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[ 21/262] R-CRAN-withr-0:3.0.2-1.fc41.c 100% |   0.0   B/s |   0.0   B |  00m00s
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[ 22/262] R-CRAN-R6-0:2.6.1-1.fc41.copr 100% |   0.0   B/s |   0.0   B |  00m00s
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[ 27/262] R-CRAN-viridisLite-0:0.4.2-1. 100% |   0.0   B/s |   0.0   B |  00m00s
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[ 28/262] libpng-2:1.6.40-4.fc41.x86_64 100% |   0.0   B/s |   0.0   B |  00m00s
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[ 31/262] R-CRAN-nlme-0:3.1.168-1.fc41. 100% |   0.0   B/s |   0.0   B |  00m00s
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[ 32/262] R-CRAN-fansi-0:1.0.6-1.fc41.c 100% |   0.0   B/s |   0.0   B |  00m00s
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[ 33/262] R-CRAN-pillar-0:1.10.2-1.fc41 100% |   0.0   B/s |   0.0   B |  00m00s
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[ 36/262] R-rpm-macros-0:1.2.1-11.fc41. 100% |   0.0   B/s |   0.0   B |  00m00s
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[ 37/262] libRmath-0:4.4.3-1.fc41.x86_6 100% |   0.0   B/s |   0.0   B |  00m00s
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[ 38/262] libXmu-0:1.2.1-2.fc41.x86_64  100% |   0.0   B/s |   0.0   B |  00m00s
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[ 39/262] libicu-0:74.2-2.fc41.x86_64   100% |   0.0   B/s |   0.0   B |  00m00s
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[ 40/262] libjpeg-turbo-0:3.0.2-3.fc41. 100% |   0.0   B/s |   0.0   B |  00m00s
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[ 41/262] libtiff-0:4.6.0-6.fc41.x86_64 100% |   0.0   B/s |   0.0   B |  00m00s
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[ 42/262] tk-1:8.6.14-2.fc41.x86_64     100% |   0.0   B/s |   0.0   B |  00m00s
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[ 43/262] tre-0:0.8.0-45.20140228gitc2f 100% |   0.0   B/s |   0.0   B |  00m00s
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[ 45/262] R-CRAN-tidyselect-0:1.2.1-1.f 100% |   0.0   B/s |   0.0   B |  00m00s
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[ 46/262] R-CRAN-colorspace-0:2.1.1-1.f 100% |   0.0   B/s |   0.0   B |  00m00s
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[ 47/262] R-CRAN-utf8-0:1.2.4-1.fc41.co 100% |   0.0   B/s |   0.0   B |  00m00s
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[ 48/262] libRmath-devel-0:4.4.3-1.fc41 100% |   0.0   B/s |   0.0   B |  00m00s
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[ 49/262] make-1:4.4.1-8.fc41.x86_64    100% |   0.0   B/s |   0.0   B |  00m00s
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[ 51/262] libXext-0:1.3.6-2.fc41.x86_64 100% |   0.0   B/s |   0.0   B |  00m00s
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[ 63/262] abattis-cantarell-vf-fonts-0: 100% |   0.0   B/s |   0.0   B |  00m00s
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[ 64/262] google-noto-sans-vf-fonts-0:2 100% |   0.0   B/s |   0.0   B |  00m00s
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[213/262] R-CRAN-RcppTOML-0:0.2.3-1.fc4 100% |   5.1 MiB/s | 212.4 KiB |  00m00s
[214/262] R-CRAN-rappdirs-0:0.3.3-1.fc4 100% |   6.0 MiB/s |  61.4 KiB |  00m00s
[215/262] R-CRAN-here-0:1.0.1-1.fc41.co 100% |   1.7 MiB/s |  61.2 KiB |  00m00s
[216/262] R-CRAN-gridExtra-0:2.3-3.fc41 100% |  47.6 MiB/s |   1.0 MiB |  00m00s
[217/262] R-CRAN-bslib-0:0.9.0-1.fc41.c 100% |  74.1 MiB/s |   4.9 MiB |  00m00s
[218/262] R-CRAN-reshape2-0:1.4.4-3.fc4 100% |   1.4 MiB/s | 129.1 KiB |  00m00s
[219/262] R-CRAN-cachem-0:1.1.0-1.fc41. 100% |   8.8 MiB/s |  81.3 KiB |  00m00s
[220/262] R-CRAN-commonmark-0:1.9.5-1.f 100% |  13.3 MiB/s | 135.9 KiB |  00m00s
[221/262] R-CRAN-crayon-0:1.5.3-1.fc41. 100% |  16.1 MiB/s | 181.7 KiB |  00m00s
[222/262] R-CRAN-fastmap-0:1.2.0-1.fc41 100% |   7.6 MiB/s |  78.2 KiB |  00m00s
[223/262] R-CRAN-httpuv-0:1.6.16-1.fc41 100% |  23.5 MiB/s | 577.7 KiB |  00m00s
[224/262] R-CRAN-fontawesome-0:0.5.3-1. 100% |  42.8 MiB/s |   1.3 MiB |  00m00s
[225/262] R-CRAN-later-0:1.4.2-1.fc41.c 100% |  12.1 MiB/s | 148.9 KiB |  00m00s
[226/262] R-CRAN-sourcetools-0:0.1.7.1- 100% |   6.1 MiB/s |  62.6 KiB |  00m00s
[227/262] R-CRAN-abind-0:1.4.8-1.fc41.c 100% |   8.9 MiB/s |  81.7 KiB |  00m00s
[228/262] R-CRAN-xtable-0:1.8.4-3.fc41. 100% |  40.6 MiB/s | 706.5 KiB |  00m00s
[229/262] R-CRAN-goftest-0:1.2.3-1.fc41 100% |   3.5 MiB/s |  72.7 KiB |  00m00s
[230/262] R-CRAN-spatstat.data-0:3.1.6- 100% |  56.8 MiB/s |   4.0 MiB |  00m00s
[231/262] R-CRAN-spatstat.random-0:3.3. 100% |  19.1 MiB/s |   1.2 MiB |  00m00s
[232/262] R-CRAN-spatstat.univar-0:3.1. 100% |  11.9 MiB/s | 353.2 KiB |  00m00s
[233/262] R-CRAN-spatstat.sparse-0:3.1. 100% |   5.4 MiB/s | 233.5 KiB |  00m00s
[234/262] R-CRAN-spatstat.utils-0:3.1.3 100% |  16.0 MiB/s | 443.3 KiB |  00m00s
[235/262] R-CRAN-deldir-0:2.0.4-1.fc41. 100% |   4.7 MiB/s | 315.2 KiB |  00m00s
[236/262] R-CRAN-polyclip-0:1.10.7-1.fc 100% |   2.8 MiB/s | 133.3 KiB |  00m00s
[237/262] R-CRAN-FNN-0:1.1.4.1-1.fc41.c 100% |   7.5 MiB/s | 145.2 KiB |  00m00s
[238/262] R-CRAN-caTools-0:1.18.3-1.fc4 100% |   6.9 MiB/s | 239.0 KiB |  00m00s
[239/262] R-CRAN-gtools-0:3.9.5-1.fc41. 100% |  12.2 MiB/s | 388.4 KiB |  00m00s
[240/262] R-CRAN-stringi-0:1.8.7-1.fc41 100% |  47.9 MiB/s |   1.0 MiB |  00m00s
[241/262] R-CRAN-dotCall64-0:1.2-1.fc41 100% |   1.0 MiB/s |  45.2 KiB |  00m00s
[242/262] R-CRAN-codetools-0:0.2.20-1.f 100% |   8.9 MiB/s | 100.8 KiB |  00m00s
[243/262] R-CRAN-askpass-0:1.2.1-1.fc41 100% |   3.8 MiB/s |  35.1 KiB |  00m00s
[244/262] glpk-0:5.0-12.fc41.x86_64     100% | 664.5 KiB/s | 390.1 KiB |  00m01s
[245/262] R-CRAN-knitr-0:1.50-1.fc41.co 100% |  52.5 MiB/s |   1.0 MiB |  00m00s
[246/262] R-CRAN-rmarkdown-0:2.29-1.fc4 100% |  48.0 MiB/s |   2.0 MiB |  00m00s
[247/262] R-CRAN-yaml-0:2.3.10-1.fc41.c 100% |   5.3 MiB/s | 125.1 KiB |  00m00s
[248/262] R-CRAN-plyr-0:1.8.9-1.fc41.co 100% |  33.8 MiB/s | 831.1 KiB |  00m00s
[249/262] R-CRAN-rprojroot-0:2.0.4-1.fc 100% |   4.5 MiB/s | 120.1 KiB |  00m00s
[250/262] R-CRAN-jquerylib-0:0.1.4-1.fc 100% |  24.5 MiB/s | 301.1 KiB |  00m00s
[251/262] R-CRAN-memoise-0:2.0.1-1.fc41 100% |   5.1 MiB/s |  62.5 KiB |  00m00s
[252/262] R-CRAN-sass-0:0.4.10-1.fc41.c 100% |  64.6 MiB/s |   2.1 MiB |  00m00s
[253/262] R-CRAN-tensor-0:1.5-3.fc41.co 100% | 575.4 KiB/s |  25.3 KiB |  00m00s
[254/262] R-CRAN-bitops-0:1.0.9-1.fc41. 100% |   3.7 MiB/s |  41.7 KiB |  00m00s
[255/262] R-CRAN-sys-0:3.4.3-1.fc41.cop 100% |   6.3 MiB/s |  58.0 KiB |  00m00s
[256/262] R-CRAN-evaluate-0:1.0.3-1.fc4 100% |  11.5 MiB/s | 117.8 KiB |  00m00s
[257/262] R-CRAN-highr-0:0.11-1.fc41.co 100% |   5.4 MiB/s |  49.4 KiB |  00m00s
[258/262] R-CRAN-xfun-0:0.52-1.fc41.cop 100% |  39.9 MiB/s | 653.6 KiB |  00m00s
[259/262] R-CRAN-tinytex-0:0.57-1.fc41. 100% |  15.9 MiB/s | 162.9 KiB |  00m00s
[260/262] R-CRAN-fs-0:1.6.6-1.fc41.copr 100% |  23.1 MiB/s | 330.6 KiB |  00m00s
[261/262] R-CRAN-cli-0:3.6.5-1.fc41.cop 100% |  52.7 MiB/s |   1.4 MiB |  00m00s
[262/262] suitesparse-0:7.7.0-2.fc41.x8 100% |  10.8 MiB/s |  19.1 MiB |  00m02s
--------------------------------------------------------------------------------
[262/262] Total                         100% |  28.9 MiB/s | 107.9 MiB |  00m04s
Running transaction
[  1/264] Verify package files          100% | 183.0   B/s | 262.0   B |  00m01s
>>> Running pre-transaction scriptlet: java-21-openjdk-headless-1:21.0.6.0.7-6.f
>>> Finished pre-transaction scriptlet: java-21-openjdk-headless-1:21.0.6.0.7-6.
>>> [RPM] /var/lib/mock/fedora-41-x86_64-1745459939.298449/root/var/cache/dnf/co
[  2/264] Prepare transaction           100% | 642.0   B/s | 262.0   B |  00m00s
[  3/264] Installing nspr-0:4.36.0-4.fc 100% |  78.7 MiB/s | 322.3 KiB |  00m00s
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[  9/264] Installing fonts-filesystem-1 100% |   0.0   B/s | 788.0   B |  00m00s
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[ 15/264] Installing openblas-0:0.3.26- 100% |  47.8 MiB/s |  97.8 KiB |  00m00s
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[ 18/264] Installing libxcb-0:1.17.0-3. 100% | 118.8 MiB/s |   1.2 MiB |  00m00s
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[ 28/264] Installing flexiblas-netlib-0 100% | 293.4 MiB/s |  10.9 MiB |  00m00s
[ 29/264] Installing suitesparse-0:7.7. 100% | 402.2 MiB/s | 140.0 MiB |  00m00s
[ 30/264] Installing glpk-0:5.0-12.fc41 100% | 214.9 MiB/s | 880.2 KiB |  00m00s
[ 31/264] Installing openblas-openmp64- 100% | 439.2 MiB/s |  39.5 MiB |  00m00s
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[ 39/264] Installing abattis-cantarell- 100% |  94.9 MiB/s | 194.4 KiB |  00m00s
[ 40/264] Installing cpp-0:14.2.1-7.fc4 100% | 288.0 MiB/s |  34.6 MiB |  00m00s
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[ 44/264] Installing nss-0:3.109.0-1.fc 100% |  81.8 MiB/s |   1.9 MiB |  00m00s
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[ 46/264] Installing kernel-headers-0:6 100% | 103.8 MiB/s |   6.6 MiB |  00m00s
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[ 49/264] Installing gcc-0:14.2.1-7.fc4 100% | 293.8 MiB/s | 103.4 MiB |  00m00s
[ 50/264] Installing libquadmath-devel- 100% |  11.4 MiB/s |  23.4 KiB |  00m00s
[ 51/264] Installing gcc-gfortran-0:14. 100% | 274.6 MiB/s |  36.8 MiB |  00m00s
[ 52/264] Installing pixman-0:0.44.2-1. 100% | 130.0 MiB/s | 665.6 KiB |  00m00s
[ 53/264] Installing libstdc++-devel-0: 100% | 189.9 MiB/s |  15.6 MiB |  00m00s
[ 54/264] Installing gcc-c++-0:14.2.1-7 100% | 294.2 MiB/s |  37.7 MiB |  00m00s
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[ 56/264] Installing lksctp-tools-0:1.0 100% |  66.3 MiB/s | 271.5 KiB |  00m00s
[ 57/264] Installing dbus-libs-1:1.14.1 100% | 120.5 MiB/s | 370.0 KiB |  00m00s
[ 58/264] Installing avahi-libs-0:0.8-2 100% |  55.0 MiB/s | 168.9 KiB |  00m00s
[ 59/264] Installing cups-filesystem-1: 100% | 890.6 KiB/s |   1.8 KiB |  00m00s
[ 60/264] Installing alsa-lib-0:1.2.14- 100% | 108.5 MiB/s |   1.4 MiB |  00m00s
[ 61/264] Installing libX11-xcb-0:1.8.1 100% |  15.5 MiB/s |  15.9 KiB |  00m00s
[ 62/264] Installing libdatrie-0:0.2.13 100% |  57.7 MiB/s |  59.0 KiB |  00m00s
[ 63/264] Installing libthai-0:0.1.29-9 100% | 191.7 MiB/s | 785.3 KiB |  00m00s
[ 64/264] Installing fribidi-0:1.0.15-2 100% | 120.7 MiB/s | 370.9 KiB |  00m00s
[ 65/264] Installing less-0:668-1.fc41. 100% | 100.0 MiB/s | 409.6 KiB |  00m00s
[ 66/264] Installing xz-devel-1:5.6.2-2 100% |  84.4 MiB/s | 259.4 KiB |  00m00s
[ 67/264] Installing pcre2-utf32-0:10.4 100% | 183.2 MiB/s | 562.8 KiB |  00m00s
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[ 73/264] Installing javapackages-files 100% |   2.6 MiB/s |   5.3 KiB |  00m00s
[ 74/264] Installing nettle-0:3.10-3.fc 100% | 155.5 MiB/s | 796.1 KiB |  00m00s
[ 75/264] Installing gnutls-0:3.8.9-2.f 100% | 211.0 MiB/s |   3.6 MiB |  00m00s
[ 76/264] Installing glib2-0:2.82.5-1.f 100% | 262.3 MiB/s |  14.7 MiB |  00m00s
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[ 78/264] Installing java-21-openjdk-he 100% | 285.2 MiB/s | 201.9 MiB |  00m01s
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[ 82/264] Installing libXext-0:1.3.6-2. 100% |  89.2 MiB/s |  91.3 KiB |  00m00s
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[ 85/264] Installing libXt-0:1.3.1-1.fc 100% | 140.3 MiB/s | 431.1 KiB |  00m00s
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[ 94/264] Installing ttmkfdir-0:3.0.9-7 100% |  60.4 MiB/s | 123.8 KiB |  00m00s
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Warning: skipped OpenPGP checks for 140 packages from repository: copr_base
Complete!
Finish: build setup for R-CRAN-Seurat-5.3.0-1.fc41.copr8957487.src.rpm
Start: rpmbuild R-CRAN-Seurat-5.3.0-1.fc41.copr8957487.src.rpm
Building target platforms: x86_64
Building for target x86_64
warning: %source_date_epoch_from_changelog is set, but %changelog has no entries to take a date from
Executing(%mkbuilddir): /bin/sh -e /var/tmp/rpm-tmp.CNw3Hz
Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.wYVQ4x
+ umask 022
+ cd /builddir/build/BUILD/R-CRAN-Seurat-5.3.0-build
+ cd /builddir/build/BUILD/R-CRAN-Seurat-5.3.0-build
+ rm -rf Seurat
+ /usr/bin/mkdir -p Seurat
+ cd Seurat
+ /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/Seurat_5.3.0.tar.gz
+ STATUS=0
+ '[' 0 -ne 0 ']'
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w .
+ find -type f -executable -exec grep -Iq . '{}' ';' -exec sed -i -e '$a\' '{}' ';'
+ '[' -d Seurat/src ']'
+ find Seurat/src -type f -exec sed -i s@/usr/bin/strip@/usr/bin/true@g '{}' ';'
+ '[' -d Seurat/src ']'
+ find Seurat/src/Makevars -type f -exec sed -i s@-g0@@g '{}' ';'
+ find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' '{}' ';'
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.Pb7F8o
+ umask 022
+ cd /builddir/build/BUILD/R-CRAN-Seurat-5.3.0-build
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd Seurat
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.BPeX30
+ umask 022
+ cd /builddir/build/BUILD/R-CRAN-Seurat-5.3.0-build
+ '[' /builddir/build/BUILD/R-CRAN-Seurat-5.3.0-build/BUILDROOT '!=' / ']'
+ rm -rf /builddir/build/BUILD/R-CRAN-Seurat-5.3.0-build/BUILDROOT
++ dirname /builddir/build/BUILD/R-CRAN-Seurat-5.3.0-build/BUILDROOT
+ mkdir -p /builddir/build/BUILD/R-CRAN-Seurat-5.3.0-build
+ mkdir /builddir/build/BUILD/R-CRAN-Seurat-5.3.0-build/BUILDROOT
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd Seurat
+ mkdir -p /builddir/build/BUILD/R-CRAN-Seurat-5.3.0-build/BUILDROOT/usr/local/lib/R/library
+ /usr/bin/R CMD INSTALL -l /builddir/build/BUILD/R-CRAN-Seurat-5.3.0-build/BUILDROOT/usr/local/lib/R/library Seurat
* installing *source* package ‘Seurat’ ...
files ‘tests/testdata/visium_hd/binned_outputs/square_008um/spatial/scalefactors_json.json’, ‘tests/testdata/visium_hd/binned_outputs/square_016um/spatial/scalefactors_json.json’ have the wrong MD5 checksums
** using staged installation
** libs
using C compiler: ‘gcc (GCC) 14.2.1 20250110 (Red Hat 14.2.1-7)’
using C++ compiler: ‘g++ (GCC) 14.2.1 20250110 (Red Hat 14.2.1-7)’
using C++17
g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG  -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppEigen/include' -I'/usr/local/lib/R/library/RcppProgress/include' -I/usr/local/include    -fpic  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer    -c ModularityOptimizer.cpp -o ModularityOptimizer.o
ModularityOptimizer.cpp: In constructor ‘ModularityOptimizer::Network::Network(int, DVector*, std::vector<std::vector<int> >&, DVector*)’:
ModularityOptimizer.cpp:204:3: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation]
  204 |   for (size_t j = 0; j < edge[0].size(); j++)
      |   ^~~
ModularityOptimizer.cpp:216:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’
  216 |     for (; i <= nNodes; i++)
      |     ^~~
ModularityOptimizer.cpp: In member function ‘ModularityOptimizer::Clustering ModularityOptimizer::Network::identifyComponents()’:
ModularityOptimizer.cpp:387:9: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation]
  387 |         for (int l = firstNeighborIndex[node[k]]; l < firstNeighborIndex[node[k] + 1]; l++)
      |         ^~~
ModularityOptimizer.cpp:395:11: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’
  395 |           k++;
      |           ^
ModularityOptimizer.cpp:377:3: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation]
  377 |   for (int i = 0; i < nNodes; i++)
      |   ^~~
ModularityOptimizer.cpp:399:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’
  399 |     clustering.orderClustersByNNodes();
      |     ^~~~~~~~~~
ModularityOptimizer.cpp: In member function ‘ModularityOptimizer::Network ModularityOptimizer::Network::createSubnetwork(const ModularityOptimizer::Clustering&, int, IVector&, IVector&, IVector&, DVector&) const’:
ModularityOptimizer.cpp:429:7: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation]
  429 |       for (int k = firstNeighborIndex[j]; k < firstNeighborIndex[j + 1]; k++)
      |       ^~~
ModularityOptimizer.cpp:436:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’
  436 |         subnetwork.firstNeighborIndex[i + 1] = subnetwork.nEdges;
      |         ^~~~~~~~~~
ModularityOptimizer.cpp: In member function ‘int ModularityOptimizer::VOSClusteringTechnique::removeCluster(int)’:
ModularityOptimizer.cpp:710:3: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation]
  710 |   for (int j = 0; j < clustering->nClusters; j++)
      |   ^~~
ModularityOptimizer.cpp:721:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’
  721 |     if (i >= 0)
      |     ^~
ModularityOptimizer.cpp:723:7: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation]
  723 |       for (int j = 0; j < network->nNodes; j++)
      |       ^~~
ModularityOptimizer.cpp:726:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’
  726 |         if (cluster == clustering->nClusters - 1)
      |         ^~
ModularityOptimizer.cpp: In member function ‘void ModularityOptimizer::VOSClusteringTechnique::removeSmallClusters(int)’:
ModularityOptimizer.cpp:740:5: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation]
  740 |     for (int k = 0; k < vosClusteringTechnique.clustering->nClusters; k++)
      |     ^~~
ModularityOptimizer.cpp:747:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’
  747 |       if (i >= 0)
      |       ^~
ModularityOptimizer.cpp: In function ‘std::shared_ptr<ModularityOptimizer::Network> ModularityOptimizer::matrixToNetwork(IVector&, IVector&, DVector&, int, int)’:
ModularityOptimizer.cpp:764:3: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation]
  764 |   for (size_t i = 0; i < node1.size(); i++)
      |   ^~~
ModularityOptimizer.cpp:771:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’
  771 |     IVector firstNeighborIndex(nNodes + 1);
      |     ^~~~~~~
ModularityOptimizer.cpp:783:5: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation]
  783 |     for (size_t i = 0; i < node1.size(); i++)
      |     ^~~
ModularityOptimizer.cpp:796:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’
  796 |       if (modularityFunction == 1)
      |       ^~
ModularityOptimizer.cpp:761:7: warning: unused variable ‘n1_max’ [-Wunused-variable]
  761 |   int n1_max = *std::max_element(node1.cbegin(), node1.cend());
      |       ^~~~~~
ModularityOptimizer.cpp:762:7: warning: unused variable ‘n2_max’ [-Wunused-variable]
  762 |   int n2_max = *std::max_element(node2.cbegin(), node2.cend());
      |       ^~~~~~
g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG  -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppEigen/include' -I'/usr/local/lib/R/library/RcppProgress/include' -I/usr/local/include    -fpic  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer    -c RModularityOptimizer.cpp -o RModularityOptimizer.o
In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:205,
                 from /usr/local/lib/R/library/RcppEigen/include/Eigen/Dense:1,
                 from /usr/local/lib/R/library/RcppEigen/include/RcppEigenForward.h:28,
                 from /usr/local/lib/R/library/RcppEigen/include/RcppEigen.h:25,
                 from RModularityOptimizer.cpp:9:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
   46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i;
      |                                        ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
   47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b;
      |                                        ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument ‘__m128’ [-Wignored-attributes]
   49 | template<> struct is_arithmetic<__m128>  { enum { value = true }; };
      |                                       ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
   50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; };
      |                                        ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument ‘__m128d’ [-Wignored-attributes]
   51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; };
      |                                        ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
  222 | template<> struct unpacket_traits<Packet4f> {
      |                                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
  228 | template<> struct unpacket_traits<Packet2d> {
      |                                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
 1124 | ptranspose(PacketBlock<Packet4f,4>& kernel) {
      |                                  ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
 1129 | ptranspose(PacketBlock<Packet2d,2>& kernel) {
      |                                  ^
In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:174:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
   16 |   struct conj_helper<PACKET_REAL, PACKET_CPLX, false, false> {          \
      |                                                            ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
   29 |   struct conj_helper<PACKET_CPLX, PACKET_REAL, false, false> {          \
      |                                                            ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
   16 |   struct conj_helper<PACKET_REAL, PACKET_CPLX, false, false> {          \
      |                                                            ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
   29 |   struct conj_helper<PACKET_CPLX, PACKET_REAL, false, false> {          \
      |                                                            ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:165:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<float, 4>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57:   required from ‘struct Eigen::internal::traits<Eigen::Matrix<float, 4, 1> >’
   22 |   typedef typename find_best_packet<_Scalar,size>::type PacketScalar;
      |                                                         ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49:   required from ‘struct Eigen::internal::traits<Eigen::Quaternion<float> >’
  266 |     Alignment = internal::traits<Coefficients>::Alignment,
      |                                                 ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:24:46:   required from here
   24 |     ResAlignment = traits<Quaternion<float> >::Alignment
      |                                              ^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                                       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__m128’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
  208 |   typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
      |                                                                                        ^~~~
In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:271:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 1>’
  302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 3>’
  555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Matrix<float, 4, 1> >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Matrix<float, 4, 1> >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<float, 4, 1> >’
   98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
      |       ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<float, 4, 1>’
  178 | class Matrix
      |       ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50:   required from ‘class Eigen::QuaternionBase<Eigen::Quaternion<float> >’
   46 |   typedef typename Coefficients::CoeffReturnType CoeffReturnType;
      |                                                  ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7:   required from ‘class Eigen::Quaternion<float>’
  273 | class Quaternion : public QuaternionBase<Quaternion<_Scalar,_Options> >
      |       ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:27:3:   required from here
   27 |   {
      |   ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, 4>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57:   required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, 4, 1> >’
   22 |   typedef typename find_best_packet<_Scalar,size>::type PacketScalar;
      |                                                         ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49:   required from ‘struct Eigen::internal::traits<Eigen::Quaternion<double> >’
  266 |     Alignment = internal::traits<Coefficients>::Alignment,
      |                                                 ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:98:47:   required from here
   98 |     ResAlignment = traits<Quaternion<double> >::Alignment
      |                                               ^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                                       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  208 |   typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
      |                                                                                        ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 1>’
  302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 3>’
  555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Matrix<double, 4, 1> >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Matrix<double, 4, 1> >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, 4, 1> >’
   98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
      |       ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<double, 4, 1>’
  178 | class Matrix
      |       ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50:   required from ‘class Eigen::QuaternionBase<Eigen::Quaternion<double> >’
   46 |   typedef typename Coefficients::CoeffReturnType CoeffReturnType;
      |                                                  ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7:   required from ‘class Eigen::Quaternion<double>’
  273 | class Quaternion : public QuaternionBase<Quaternion<_Scalar,_Options> >
      |       ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:102:3:   required from here
  102 |   {
      |   ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/SparseCore:37,
                 from /usr/local/lib/R/library/RcppEigen/include/Eigen/Sparse:26,
                 from /usr/local/lib/R/library/RcppEigen/include/RcppEigenForward.h:29:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase<Eigen::SparseMatrix<double, 0, int> >’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7:   required from ‘class Eigen::SparseCompressedBase<Eigen::SparseMatrix<double, 0, int> >’
   36 | class SparseCompressedBase
      |       ^~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7:   required from ‘class Eigen::SparseMatrix<double, 0, int>’
   96 | class SparseMatrix
      |       ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25:   required from here
   61 |   typedef Triplet<double> T;
      |                         ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   47 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
RModularityOptimizer.cpp: In function ‘Rcpp::IntegerVector RunModularityClusteringCpp(Eigen::SparseMatrix<double, 0, int>, int, double, int, int, int, int, bool, std::string)’:
RModularityOptimizer.cpp:163:5: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation]
  163 |     else
      |     ^~~~
RModularityOptimizer.cpp:165:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’
  165 |       Rprintf("Number of communities: %d\n", clustering->getNClusters());
      |       ^~~~~~~
g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG  -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppEigen/include' -I'/usr/local/lib/R/library/RcppProgress/include' -I/usr/local/include    -fpic  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer    -c RcppExports.cpp -o RcppExports.o
In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:205,
                 from /usr/local/lib/R/library/RcppEigen/include/Eigen/Dense:1,
                 from /usr/local/lib/R/library/RcppEigen/include/RcppEigenForward.h:28,
                 from /usr/local/lib/R/library/RcppEigen/include/RcppEigen.h:25,
                 from RcppExports.cpp:4:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
   46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i;
      |                                        ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
   47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b;
      |                                        ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument ‘__m128’ [-Wignored-attributes]
   49 | template<> struct is_arithmetic<__m128>  { enum { value = true }; };
      |                                       ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
   50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; };
      |                                        ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument ‘__m128d’ [-Wignored-attributes]
   51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; };
      |                                        ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
  222 | template<> struct unpacket_traits<Packet4f> {
      |                                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
  228 | template<> struct unpacket_traits<Packet2d> {
      |                                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
 1124 | ptranspose(PacketBlock<Packet4f,4>& kernel) {
      |                                  ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
 1129 | ptranspose(PacketBlock<Packet2d,2>& kernel) {
      |                                  ^
In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:174:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
   16 |   struct conj_helper<PACKET_REAL, PACKET_CPLX, false, false> {          \
      |                                                            ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
   29 |   struct conj_helper<PACKET_CPLX, PACKET_REAL, false, false> {          \
      |                                                            ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
   16 |   struct conj_helper<PACKET_REAL, PACKET_CPLX, false, false> {          \
      |                                                            ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
   29 |   struct conj_helper<PACKET_CPLX, PACKET_REAL, false, false> {          \
      |                                                            ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:165:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<float, 4>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57:   required from ‘struct Eigen::internal::traits<Eigen::Matrix<float, 4, 1> >’
   22 |   typedef typename find_best_packet<_Scalar,size>::type PacketScalar;
      |                                                         ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49:   required from ‘struct Eigen::internal::traits<Eigen::Quaternion<float> >’
  266 |     Alignment = internal::traits<Coefficients>::Alignment,
      |                                                 ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:24:46:   required from here
   24 |     ResAlignment = traits<Quaternion<float> >::Alignment
      |                                              ^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                                       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__m128’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
  208 |   typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
      |                                                                                        ^~~~
In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:271:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 1>’
  302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 3>’
  555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Matrix<float, 4, 1> >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Matrix<float, 4, 1> >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<float, 4, 1> >’
   98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
      |       ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<float, 4, 1>’
  178 | class Matrix
      |       ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50:   required from ‘class Eigen::QuaternionBase<Eigen::Quaternion<float> >’
   46 |   typedef typename Coefficients::CoeffReturnType CoeffReturnType;
      |                                                  ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7:   required from ‘class Eigen::Quaternion<float>’
  273 | class Quaternion : public QuaternionBase<Quaternion<_Scalar,_Options> >
      |       ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:27:3:   required from here
   27 |   {
      |   ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, 4>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57:   required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, 4, 1> >’
   22 |   typedef typename find_best_packet<_Scalar,size>::type PacketScalar;
      |                                                         ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49:   required from ‘struct Eigen::internal::traits<Eigen::Quaternion<double> >’
  266 |     Alignment = internal::traits<Coefficients>::Alignment,
      |                                                 ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:98:47:   required from here
   98 |     ResAlignment = traits<Quaternion<double> >::Alignment
      |                                               ^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                                       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  208 |   typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
      |                                                                                        ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 1>’
  302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 3>’
  555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Matrix<double, 4, 1> >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Matrix<double, 4, 1> >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, 4, 1> >’
   98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
      |       ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<double, 4, 1>’
  178 | class Matrix
      |       ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50:   required from ‘class Eigen::QuaternionBase<Eigen::Quaternion<double> >’
   46 |   typedef typename Coefficients::CoeffReturnType CoeffReturnType;
      |                                                  ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7:   required from ‘class Eigen::Quaternion<double>’
  273 | class Quaternion : public QuaternionBase<Quaternion<_Scalar,_Options> >
      |       ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:102:3:   required from here
  102 |   {
      |   ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/SparseCore:37,
                 from /usr/local/lib/R/library/RcppEigen/include/Eigen/Sparse:26,
                 from /usr/local/lib/R/library/RcppEigen/include/RcppEigenForward.h:29:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase<Eigen::SparseMatrix<double, 0, int> >’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7:   required from ‘class Eigen::SparseCompressedBase<Eigen::SparseMatrix<double, 0, int> >’
   36 | class SparseCompressedBase
      |       ^~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7:   required from ‘class Eigen::SparseMatrix<double, 0, int>’
   96 | class SparseMatrix
      |       ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25:   required from here
   61 |   typedef Triplet<double> T;
      |                         ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   47 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase<Eigen::SparseMatrix<double, 1> >’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7:   required from ‘class Eigen::SparseCompressedBase<Eigen::SparseMatrix<double, 1> >’
   36 | class SparseCompressedBase
      |       ^~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7:   required from ‘class Eigen::SparseMatrix<double, 1>’
   96 | class SparseMatrix
      |       ^~~~~~~~~~~~
RcppExports.cpp:71:105:   required from here
   71 |     rcpp_result_gen = Rcpp::wrap(RowMergeMatrices(mat1, mat2, mat1_rownames, mat2_rownames, all_rownames));
      |                                                                                                         ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   47 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, -1>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57:   required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, -1, -1> >’
   22 |   typedef typename find_best_packet<_Scalar,size>::type PacketScalar;
      |                                                         ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Map.h:18:8:   required from ‘struct Eigen::internal::traits<Eigen::Map<Eigen::Matrix<double, -1, -1> > >’
   18 | struct traits<Map<PlainObjectType, MapOptions, StrideType> >
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:32:48:   required from ‘struct Eigen::internal::accessors_level<Eigen::Map<Eigen::Matrix<double, -1, -1> > >’
   32 |   enum { has_direct_access = (traits<Derived>::Flags & DirectAccessBit) ? 1 : 0,
      |                                                ^~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:111:75:   required from ‘class Eigen::Map<Eigen::Matrix<double, -1, -1> >’
  111 |          int Level = internal::accessors_level<Derived>::has_write_access ? WriteAccessors : ReadOnlyAccessors
      |                                                          ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RcppExports.cpp:94:67:   required from here
   94 |     rcpp_result_gen = Rcpp::wrap(Standardize(mat, display_progress));
      |                                                                   ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                                       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  208 |   typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
      |                                                                                        ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, -1>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, -1>, 1>’
  302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, -1>, 3>’
  555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Matrix<double, -1, -1> >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Matrix<double, -1, -1> >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, -1, -1> >’
   98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
      |       ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<double, -1, -1>’
  178 | class Matrix
      |       ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Map.h:24:49:   required from ‘struct Eigen::internal::traits<Eigen::Map<Eigen::Matrix<double, -1, -1> > >’
   24 |                              ? PlainObjectType::ColsAtCompileTime
      |                                                 ^~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:32:48:   required from ‘struct Eigen::internal::accessors_level<Eigen::Map<Eigen::Matrix<double, -1, -1> > >’
   32 |   enum { has_direct_access = (traits<Derived>::Flags & DirectAccessBit) ? 1 : 0,
      |                                                ^~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:111:75:   required from ‘class Eigen::Map<Eigen::Matrix<double, -1, -1> >’
  111 |          int Level = internal::accessors_level<Derived>::has_write_access ? WriteAccessors : ReadOnlyAccessors
      |                                                          ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RcppExports.cpp:94:67:   required from here
   94 |     rcpp_result_gen = Rcpp::wrap(Standardize(mat, display_progress));
      |                                                                   ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1>’
  302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 3>’
  555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Map<Eigen::Matrix<double, -1, -1> > >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<double, -1, -1> > >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34:   required from ‘class Eigen::MapBase<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>’
   37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors>
      |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34:   required from ‘class Eigen::MapBase<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1>’
  223 | template<typename Derived> class MapBase<Derived, WriteAccessors>
      |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79:   required from ‘class Eigen::Map<Eigen::Matrix<double, -1, -1> >’
   94 | template<typename PlainObjectType, int MapOptions, typename StrideType> class Map
      |                                                                               ^~~
RcppExports.cpp:94:67:   required from here
   94 |     rcpp_result_gen = Rcpp::wrap(Standardize(mat, display_progress));
      |                                                                   ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, 1>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, 1>, 1>’
  302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, 1>, 3>’
  555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Matrix<double, -1, 1> >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Matrix<double, -1, 1> >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, -1, 1> >’
   98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
      |       ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<double, -1, 1>’
  178 | class Matrix
      |       ^~~~~~
RcppExports.cpp:169:45:   required from here
  169 |     rcpp_result_gen = Rcpp::wrap(FastExpMean(mat, display_progress));
      |                                  ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::SparseMatrix<double, 0, int>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:336:80:   required from ‘struct Eigen::internal::evaluator<Eigen::SparseCompressedBase<Eigen::SparseMatrix<double, 0, int> > >’
  336 |   typedef typename DenseCoeffsBase<Derived,ReadOnlyAccessors>::CoeffReturnType CoeffReturnType;
      |                                                                                ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1505:8:   required from ‘struct Eigen::internal::evaluator<Eigen::SparseMatrix<double, 0, int> >’
 1505 | struct evaluator<SparseMatrix<_Scalar,_Options,_StorageIndex> >
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseAssign.h:77:20:   required from ‘void Eigen::internal::assign_sparse_to_sparse(DstXprType&, const SrcXprType&) [with DstXprType = Eigen::SparseMatrix<double, 0, int>; SrcXprType = Eigen::SparseMatrix<double, 0, int>]’
   77 |   SrcEvaluatorType srcEvaluator(src);
      |                    ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseAssign.h:132:28:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Sparse2Sparse>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<typename DstXprType::Scalar, typename SrcXprType::Scalar>&) [with DstXprType = Eigen::SparseMatrix<double, 0, int>; SrcXprType = Eigen::SparseMatrix<double, 0, int>; Functor = Eigen::internal::assign_op<double, double>; typename DstXprType::Scalar = double; typename SrcXprType::Scalar = double]’
  132 |     assign_sparse_to_sparse(dst.derived(), src.derived());
      |     ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::SparseMatrix<double, 0, int>; Src = Eigen::SparseMatrix<double, 0, int>; Func = assign_op<double, double>]’
  890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:917:27:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:713:13:   required from ‘Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::SparseMatrix(const Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>&) [with _Scalar = double; int _Options = 0; _StorageIndex = int]’
  713 |       *this = other.derived();
      |       ~~~~~~^~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/RcppEigenWrap.h:387:24:   required from ‘Eigen::SparseMatrix<Scalar> Rcpp::traits::Exporter<Eigen::SparseMatrix<Scalar> >::get() [with T = double]’
  387 |                 return ans;
      |                        ^~~
/usr/local/lib/R/library/Rcpp/include/Rcpp/as.h:89:32:   required from ‘T Rcpp::internal::as(SEXP, Rcpp::traits::r_type_generic_tag) [with T = Eigen::SparseMatrix<double, 0, int>; SEXP = SEXPREC*]’
   89 |             return exporter.get();
      |                    ~~~~~~~~~~~~^~
/usr/local/lib/R/library/Rcpp/include/Rcpp/as.h:152:31:   required from ‘T Rcpp::as(SEXP) [with T = Eigen::SparseMatrix<double, 0, int>; SEXP = SEXPREC*]’
  152 |         return internal::as<T>(x, typename traits::r_type_traits<T>::r_category());
      |                ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/Rcpp/include/Rcpp/InputParameter.h:34:43:   required from ‘Rcpp::InputParameter<T>::operator T() [with T = Eigen::SparseMatrix<double, 0, int>]’
   34 |         inline operator T() { return as<T>(x) ; }
      |                                      ~~~~~^~~
RcppExports.cpp:29:60:   required from here
   29 |     rcpp_result_gen = Rcpp::wrap(RunModularityClusteringCpp(SNN, modularityFunction, resolution, algorithm, nRandomStarts, nIterations, randomSeed, printOutput, edgefilename));
      |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::SparseMatrix<double, 1>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:336:80:   required from ‘struct Eigen::internal::evaluator<Eigen::SparseCompressedBase<Eigen::SparseMatrix<double, 1> > >’
  336 |   typedef typename DenseCoeffsBase<Derived,ReadOnlyAccessors>::CoeffReturnType CoeffReturnType;
      |                                                                                ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1505:8:   required from ‘struct Eigen::internal::evaluator<Eigen::SparseMatrix<double, 1> >’
 1505 | struct evaluator<SparseMatrix<_Scalar,_Options,_StorageIndex> >
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseAssign.h:77:20:   required from ‘void Eigen::internal::assign_sparse_to_sparse(DstXprType&, const SrcXprType&) [with DstXprType = Eigen::SparseMatrix<double, 1>; SrcXprType = Eigen::SparseMatrix<double, 1>]’
   77 |   SrcEvaluatorType srcEvaluator(src);
      |                    ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseAssign.h:132:28:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Sparse2Sparse>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<typename DstXprType::Scalar, typename SrcXprType::Scalar>&) [with DstXprType = Eigen::SparseMatrix<double, 1>; SrcXprType = Eigen::SparseMatrix<double, 1>; Functor = Eigen::internal::assign_op<double, double>; typename DstXprType::Scalar = double; typename SrcXprType::Scalar = double]’
  132 |     assign_sparse_to_sparse(dst.derived(), src.derived());
      |     ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::SparseMatrix<double, 1>; Src = Eigen::SparseMatrix<double, 1>; Func = assign_op<double, double>]’
  890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:917:27:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:713:13:   required from ‘Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::SparseMatrix(const Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>&) [with _Scalar = double; int _Options = 1; _StorageIndex = int]’
  713 |       *this = other.derived();
      |       ~~~~~~^~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/RcppEigenWrap.h:412:24:   required from ‘Eigen::SparseMatrix<_Scalar, 1> Rcpp::traits::Exporter<Eigen::SparseMatrix<_Scalar, 1> >::get() [with T = double]’
  412 |                 return ans;
      |                        ^~~
/usr/local/lib/R/library/Rcpp/include/Rcpp/as.h:89:32:   required from ‘T Rcpp::internal::as(SEXP, Rcpp::traits::r_type_generic_tag) [with T = Eigen::SparseMatrix<double, 1>; SEXP = SEXPREC*]’
   89 |             return exporter.get();
      |                    ~~~~~~~~~~~~^~
/usr/local/lib/R/library/Rcpp/include/Rcpp/as.h:152:31:   required from ‘T Rcpp::as(SEXP) [with T = Eigen::SparseMatrix<double, 1>; SEXP = SEXPREC*]’
  152 |         return internal::as<T>(x, typename traits::r_type_traits<T>::r_category());
      |                ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/Rcpp/include/Rcpp/InputParameter.h:34:43:   required from ‘Rcpp::InputParameter<T>::operator T() [with T = Eigen::SparseMatrix<double, 1>]’
   34 |         inline operator T() { return as<T>(x) ; }
      |                                      ~~~~~^~~
RcppExports.cpp:71:50:   required from here
   71 |     rcpp_result_gen = Rcpp::wrap(RowMergeMatrices(mat1, mat2, mat1_rownames, mat2_rownames, all_rownames));
      |                                  ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG  -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppEigen/include' -I'/usr/local/lib/R/library/RcppProgress/include' -I/usr/local/include    -fpic  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer    -c data_manipulation.cpp -o data_manipulation.o
In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:205,
                 from /usr/local/lib/R/library/RcppEigen/include/Eigen/Dense:1,
                 from /usr/local/lib/R/library/RcppEigen/include/RcppEigenForward.h:28,
                 from /usr/local/lib/R/library/RcppEigen/include/RcppEigen.h:25,
                 from data_manipulation.cpp:1:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
   46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i;
      |                                        ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
   47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b;
      |                                        ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument ‘__m128’ [-Wignored-attributes]
   49 | template<> struct is_arithmetic<__m128>  { enum { value = true }; };
      |                                       ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
   50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; };
      |                                        ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument ‘__m128d’ [-Wignored-attributes]
   51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; };
      |                                        ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
  222 | template<> struct unpacket_traits<Packet4f> {
      |                                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
  228 | template<> struct unpacket_traits<Packet2d> {
      |                                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
 1124 | ptranspose(PacketBlock<Packet4f,4>& kernel) {
      |                                  ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
 1129 | ptranspose(PacketBlock<Packet2d,2>& kernel) {
      |                                  ^
In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:174:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
   16 |   struct conj_helper<PACKET_REAL, PACKET_CPLX, false, false> {          \
      |                                                            ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
   29 |   struct conj_helper<PACKET_CPLX, PACKET_REAL, false, false> {          \
      |                                                            ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
   16 |   struct conj_helper<PACKET_REAL, PACKET_CPLX, false, false> {          \
      |                                                            ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
   29 |   struct conj_helper<PACKET_CPLX, PACKET_REAL, false, false> {          \
      |                                                            ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:165:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<float, 4>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57:   required from ‘struct Eigen::internal::traits<Eigen::Matrix<float, 4, 1> >’
   22 |   typedef typename find_best_packet<_Scalar,size>::type PacketScalar;
      |                                                         ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49:   required from ‘struct Eigen::internal::traits<Eigen::Quaternion<float> >’
  266 |     Alignment = internal::traits<Coefficients>::Alignment,
      |                                                 ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:24:46:   required from here
   24 |     ResAlignment = traits<Quaternion<float> >::Alignment
      |                                              ^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                                       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__m128’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
  208 |   typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
      |                                                                                        ^~~~
In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:271:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 1>’
  302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 3>’
  555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Matrix<float, 4, 1> >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Matrix<float, 4, 1> >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<float, 4, 1> >’
   98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
      |       ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<float, 4, 1>’
  178 | class Matrix
      |       ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50:   required from ‘class Eigen::QuaternionBase<Eigen::Quaternion<float> >’
   46 |   typedef typename Coefficients::CoeffReturnType CoeffReturnType;
      |                                                  ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7:   required from ‘class Eigen::Quaternion<float>’
  273 | class Quaternion : public QuaternionBase<Quaternion<_Scalar,_Options> >
      |       ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:27:3:   required from here
   27 |   {
      |   ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, 4>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57:   required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, 4, 1> >’
   22 |   typedef typename find_best_packet<_Scalar,size>::type PacketScalar;
      |                                                         ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49:   required from ‘struct Eigen::internal::traits<Eigen::Quaternion<double> >’
  266 |     Alignment = internal::traits<Coefficients>::Alignment,
      |                                                 ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:98:47:   required from here
   98 |     ResAlignment = traits<Quaternion<double> >::Alignment
      |                                               ^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                                       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  208 |   typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
      |                                                                                        ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 1>’
  302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 3>’
  555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Matrix<double, 4, 1> >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Matrix<double, 4, 1> >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, 4, 1> >’
   98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
      |       ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<double, 4, 1>’
  178 | class Matrix
      |       ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50:   required from ‘class Eigen::QuaternionBase<Eigen::Quaternion<double> >’
   46 |   typedef typename Coefficients::CoeffReturnType CoeffReturnType;
      |                                                  ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7:   required from ‘class Eigen::Quaternion<double>’
  273 | class Quaternion : public QuaternionBase<Quaternion<_Scalar,_Options> >
      |       ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:102:3:   required from here
  102 |   {
      |   ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/SparseCore:37,
                 from /usr/local/lib/R/library/RcppEigen/include/Eigen/Sparse:26,
                 from /usr/local/lib/R/library/RcppEigen/include/RcppEigenForward.h:29:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase<Eigen::SparseMatrix<double, 0, int> >’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7:   required from ‘class Eigen::SparseCompressedBase<Eigen::SparseMatrix<double, 0, int> >’
   36 | class SparseCompressedBase
      |       ^~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7:   required from ‘class Eigen::SparseMatrix<double, 0, int>’
   96 | class SparseMatrix
      |       ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25:   required from here
   61 |   typedef Triplet<double> T;
      |                         ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   47 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, -1>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57:   required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, -1, 1> >’
   22 |   typedef typename find_best_packet<_Scalar,size>::type PacketScalar;
      |                                                         ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, -1, 1> >’
   98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
      |       ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<double, -1, 1>’
  178 | class Matrix
      |       ^~~~~~
data_manipulation.cpp:18:21:   required from here
   18 |     Eigen::VectorXd colSums = data.transpose() * Eigen::VectorXd::Ones(data.rows());
      |                     ^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                                       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  208 |   typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
      |                                                                                        ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, 1>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, 1>, 1>’
  302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, 1>, 3>’
  555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Matrix<double, -1, 1> >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Matrix<double, -1, 1> >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, -1, 1> >’
   98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
      |       ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<double, -1, 1>’
  178 | class Matrix
      |       ^~~~~~
data_manipulation.cpp:18:21:   required from here
   18 |     Eigen::VectorXd colSums = data.transpose() * Eigen::VectorXd::Ones(data.rows());
      |                     ^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase<Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> > >’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7:   required from ‘class Eigen::SparseCompressedBase<Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> > >’
   36 | class SparseCompressedBase
      |       ^~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseTranspose.h:22:9:   required from ‘class Eigen::internal::SparseTransposeImpl<Eigen::SparseMatrix<double, 0, int>, 1024>’
   22 |   class SparseTransposeImpl<MatrixType,CompressedAccessBit>
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseTranspose.h:45:37:   required from ‘class Eigen::TransposeImpl<Eigen::SparseMatrix<double, 0, int>, Eigen::Sparse>’
   45 | template<typename MatrixType> class TransposeImpl<MatrixType,Sparse>
      |                                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37:   required from ‘class Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> >’
   52 | template<typename MatrixType> class Transpose
      |                                     ^~~~~~~~~
data_manipulation.cpp:18:45:   required from here
   18 |     Eigen::VectorXd colSums = data.transpose() * Eigen::VectorXd::Ones(data.rows());
      |                               ~~~~~~~~~~~~~~^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   47 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, 1> >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, 1> > >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, 1> > >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7:   required from ‘class Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, 1> >’
   60 | class CwiseNullaryOp : public internal::dense_xpr_base< CwiseNullaryOp<NullaryOp, PlainObjectType> >::type, internal::no_assignment_operator
      |       ^~~~~~~~~~~~~~
data_manipulation.cpp:18:71:   required from here
   18 |     Eigen::VectorXd colSums = data.transpose() * Eigen::VectorXd::Ones(data.rows());
      |                                                  ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Product<Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> >, Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, 1> >, 0>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Product<Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> >, Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, 1> >, 0> >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Product<Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> >, Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, 1> >, 0> >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7:   required from ‘class Eigen::internal::dense_product_base<Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> >, Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, 1> >, 0, 7>’
  120 | class dense_product_base
      |       ^~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7:   required from ‘class Eigen::ProductImpl<Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> >, Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, 1> >, 0, Eigen::Dense>’
  152 | class ProductImpl<Lhs,Rhs,Option,Dense>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7:   required from ‘class Eigen::Product<Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> >, Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, 1> >, 0>’
   71 | class Product : public ProductImpl<_Lhs,_Rhs,Option,
      |       ^~~~~~~
data_manipulation.cpp:18:83:   required from here
   18 |     Eigen::VectorXd colSums = data.transpose() * Eigen::VectorXd::Ones(data.rows());
      |                                                                                   ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase<Eigen::SparseMatrix<double, 1, int> >’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7:   required from ‘class Eigen::SparseCompressedBase<Eigen::SparseMatrix<double, 1, int> >’
   36 | class SparseCompressedBase
      |       ^~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7:   required from ‘class Eigen::SparseMatrix<double, 1, int>’
   96 | class SparseMatrix
      |       ^~~~~~~~~~~~
data_manipulation.cpp:75:127:   required from here
   75 |                                              std::vector< std::string > mat2_rownames, std::vector< std::string > all_rownames){
      |                                                                                                                               ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   47 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, -1>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, -1>, 1>’
  302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, -1>, 3>’
  555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Matrix<double, -1, -1> >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Matrix<double, -1, -1> >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, -1, -1> >’
   98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
      |       ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<double, -1, -1>’
  178 | class Matrix
      |       ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Map.h:24:49:   required from ‘struct Eigen::internal::traits<Eigen::Map<Eigen::Matrix<double, -1, -1> > >’
   24 |                              ? PlainObjectType::ColsAtCompileTime
      |                                                 ^~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:32:48:   required from ‘struct Eigen::internal::accessors_level<Eigen::Map<Eigen::Matrix<double, -1, -1> > >’
   32 |   enum { has_direct_access = (traits<Derived>::Flags & DirectAccessBit) ? 1 : 0,
      |                                                ^~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:111:75:   required from ‘class Eigen::Map<Eigen::Matrix<double, -1, -1> >’
  111 |          int Level = internal::accessors_level<Derived>::has_write_access ? WriteAccessors : ReadOnlyAccessors
      |                                                          ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
data_manipulation.cpp:131:88:   required from here
  131 | NumericMatrix Standardize(Eigen::Map<Eigen::MatrixXd> mat, bool display_progress = true){
      |                                                                                        ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1>’
  302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 3>’
  555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Map<Eigen::Matrix<double, -1, -1> > >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<double, -1, -1> > >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34:   required from ‘class Eigen::MapBase<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>’
   37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors>
      |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34:   required from ‘class Eigen::MapBase<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1>’
  223 | template<typename Derived> class MapBase<Derived, WriteAccessors>
      |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79:   required from ‘class Eigen::Map<Eigen::Matrix<double, -1, -1> >’
   94 | template<typename PlainObjectType, int MapOptions, typename StrideType> class Map
      |                                                                               ^~~
data_manipulation.cpp:131:88:   required from here
  131 | NumericMatrix Standardize(Eigen::Map<Eigen::MatrixXd> mat, bool display_progress = true){
      |                                                                                        ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, -1, 1>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, -1, 1>, 1>’
  302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, -1, 1>, 3>’
  555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Array<double, -1, 1> >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34:   required from ‘class Eigen::ArrayBase<Eigen::Array<double, -1, 1> >’
   39 | template<typename Derived> class ArrayBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, -1, 1> >’
   98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
      |       ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7:   required from ‘class Eigen::Array<double, -1, 1>’
   45 | class Array
      |       ^~~~~
data_manipulation.cpp:136:20:   required from here
  136 |     Eigen::ArrayXd r = mat.col(i).array();
      |                    ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true>, 1>’
  302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true>, 3>’
  555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true> >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true> >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34:   required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true>, 0>’
   37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors>
      |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34:   required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true>, 1>’
  223 | template<typename Derived> class MapBase<Derived, WriteAccessors>
      |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7:   required from ‘class Eigen::internal::BlockImpl_dense<Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true, true>’
  329 | class BlockImpl_dense<XprType,BlockRows,BlockCols, InnerPanel,true>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7:   required from ‘class Eigen::BlockImpl<Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true, Eigen::Dense>’
  154 | class BlockImpl<XprType, BlockRows, BlockCols, InnerPanel, Dense>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81:   required from ‘class Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true>’
  103 | template<typename XprType, int BlockRows, int BlockCols, bool InnerPanel> class Block
      |                                                                                 ^~~~~
data_manipulation.cpp:136:31:   required from here
  136 |     Eigen::ArrayXd r = mat.col(i).array();
      |                        ~~~~~~~^~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true> >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true> >, 1>’
  302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true> >, 3>’
  555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true> > >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34:   required from ‘class Eigen::ArrayBase<Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true> > >’
   39 | template<typename Derived> class ArrayBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7:   required from ‘class Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true> >’
   42 | class ArrayWrapper : public ArrayBase<ArrayWrapper<ExpressionType> >
      |       ^~~~~~~~~~~~
data_manipulation.cpp:136:40:   required from here
  136 |     Eigen::ArrayXd r = mat.col(i).array();
      |                        ~~~~~~~~~~~~~~~~^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34:   required from ‘class Eigen::ArrayBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >’
   39 | template<typename Derived> class ArrayBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7:   required from ‘class Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> >’
   60 | class CwiseNullaryOp : public internal::dense_xpr_base< CwiseNullaryOp<NullaryOp, PlainObjectType> >::type, internal::no_assignment_operator
      |       ^~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28:   required from ‘struct Eigen::internal::traits<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > > >’
   38 |                    >::type Scalar;
      |                            ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7:   required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> >, Eigen::Dense>’
  148 | class CwiseBinaryOpImpl
      |       ^~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7:   required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >’
   77 | class CwiseBinaryOp :
      |       ^~~~~~~~~~~~~
data_manipulation.cpp:138:32:   required from here
  138 |     double colSdev = sqrt((r - colMean).square().sum() / (mat.rows() - 1));
      |                                ^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > > >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34:   required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > > >’
   39 | template<typename Derived> class ArrayBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7:   required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> >, Eigen::Dense>’
  148 | class CwiseBinaryOpImpl
      |       ^~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7:   required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >’
   77 | class CwiseBinaryOp :
      |       ^~~~~~~~~~~~~
data_manipulation.cpp:138:32:   required from here
  138 |     double colSdev = sqrt((r - colMean).square().sum() / (mat.rows() - 1));
      |                                ^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > > >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > > > >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34:   required from ‘class Eigen::ArrayBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > > > >’
   39 | template<typename Derived> class ArrayBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7:   required from ‘class Eigen::CwiseUnaryOpImpl<Eigen::internal::scalar_square_op<double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >, Eigen::Dense>’
   94 | class CwiseUnaryOpImpl
      |       ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7:   required from ‘class Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > > >’
   55 | class CwiseUnaryOp : public CwiseUnaryOpImpl<UnaryOp, XprType, typename internal::traits<XprType>::StorageKind>, internal::no_assignment_operator
      |       ^~~~~~~~~~~~
data_manipulation.cpp:138:47:   required from here
  138 |     double colSdev = sqrt((r - colMean).square().sum() / (mat.rows() - 1));
      |                           ~~~~~~~~~~~~~~~~~~~~^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase<Eigen::Block<Eigen::SparseMatrix<double, 0, int>, -1, 1, true> >’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7:   required from ‘class Eigen::SparseCompressedBase<Eigen::Block<Eigen::SparseMatrix<double, 0, int>, -1, 1, true> >’
   36 | class SparseCompressedBase
      |       ^~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseBlock.h:96:7:   required from ‘class Eigen::internal::sparse_matrix_block_impl<Eigen::SparseMatrix<double, 0, int>, -1, 1>’
   96 | class sparse_matrix_block_impl
      |       ^~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseBlock.h:287:7:   required from ‘class Eigen::BlockImpl<Eigen::SparseMatrix<double, 0, int>, -1, 1, true, Eigen::Sparse>’
  287 | class BlockImpl<SparseMatrix<_Scalar, _Options, _StorageIndex>,BlockRows,BlockCols,true,Sparse>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81:   required from ‘class Eigen::Block<Eigen::SparseMatrix<double, 0, int>, -1, 1, true>’
  103 | template<typename XprType, int BlockRows, int BlockCols, bool InnerPanel> class Block
      |                                                                                 ^~~~~
data_manipulation.cpp:186:50:   required from here
  186 |     Eigen::VectorXd col = Eigen::VectorXd(mat.col(k));
      |                                           ~~~~~~~^~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   47 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, 1>’
  302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, 3>’
  555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34:   required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, 0>’
   37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors>
      |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34:   required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, 1>’
  223 | template<typename Derived> class MapBase<Derived, WriteAccessors>
      |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7:   required from ‘class Eigen::internal::BlockImpl_dense<Eigen::Matrix<double, -1, -1>, -1, 1, true, true>’
  329 | class BlockImpl_dense<XprType,BlockRows,BlockCols, InnerPanel,true>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7:   required from ‘class Eigen::BlockImpl<Eigen::Matrix<double, -1, -1>, -1, 1, true, Eigen::Dense>’
  154 | class BlockImpl<XprType, BlockRows, BlockCols, InnerPanel, Dense>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81:   required from ‘class Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>’
  103 | template<typename XprType, int BlockRows, int BlockCols, bool InnerPanel> class Block
      |                                                                                 ^~~~~
data_manipulation.cpp:187:19:   required from here
  187 |     scaled_mat.col(k) = (col.array() - colMean) / colSdev;
      |     ~~~~~~~~~~~~~~^~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::ArrayWrapper<Eigen::Matrix<double, -1, 1> >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::ArrayWrapper<Eigen::Matrix<double, -1, 1> >, 1>’
  302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::ArrayWrapper<Eigen::Matrix<double, -1, 1> >, 3>’
  555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::ArrayWrapper<Eigen::Matrix<double, -1, 1> > >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34:   required from ‘class Eigen::ArrayBase<Eigen::ArrayWrapper<Eigen::Matrix<double, -1, 1> > >’
   39 | template<typename Derived> class ArrayBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7:   required from ‘class Eigen::ArrayWrapper<Eigen::Matrix<double, -1, 1> >’
   42 | class ArrayWrapper : public ArrayBase<ArrayWrapper<ExpressionType> >
      |       ^~~~~~~~~~~~
data_manipulation.cpp:187:35:   required from here
  187 |     scaled_mat.col(k) = (col.array() - colMean) / colSdev;
      |                          ~~~~~~~~~^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, 1> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, 1> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > > >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34:   required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, 1> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > > >’
   39 | template<typename Derived> class ArrayBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7:   required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_difference_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, 1> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> >, Eigen::Dense>’
  148 | class CwiseBinaryOpImpl
      |       ^~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7:   required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, 1> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >’
   77 | class CwiseBinaryOp :
      |       ^~~~~~~~~~~~~
data_manipulation.cpp:187:40:   required from here
  187 |     scaled_mat.col(k) = (col.array() - colMean) / colSdev;
      |                                        ^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, 1> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, 1> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > > >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34:   required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, 1> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > > >’
   39 | template<typename Derived> class ArrayBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7:   required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, 1> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> >, Eigen::Dense>’
  148 | class CwiseBinaryOpImpl
      |       ^~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7:   required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, 1> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >’
   77 | class CwiseBinaryOp :
      |       ^~~~~~~~~~~~~
data_manipulation.cpp:187:51:   required from here
  187 |     scaled_mat.col(k) = (col.array() - colMean) / colSdev;
      |                                                   ^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 1>’
  302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Matrix<double, -1, -1> >, 3>’
  555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37:   required from ‘class Eigen::TransposeImpl<Eigen::Matrix<double, -1, -1>, Eigen::Dense>’
  118 | template<typename MatrixType> class TransposeImpl<MatrixType,Dense>
      |                                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37:   required from ‘class Eigen::Transpose<Eigen::Matrix<double, -1, -1> >’
   52 | template<typename MatrixType> class Transpose
      |                                     ^~~~~~~~~
data_manipulation.cpp:194:30:   required from here
  194 |   return scaled_mat.transpose();
      |          ~~~~~~~~~~~~~~~~~~~~^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0> >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0> >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/VectorwiseOp.h:56:7:   required from ‘class Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>’
   56 | class PartialReduxExpr : public internal::dense_xpr_base< PartialReduxExpr<MatrixType, MemberOp, Direction> >::type,
      |       ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28:   required from ‘struct Eigen::internal::traits<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > > >’
   38 |                    >::type Scalar;
      |                            ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7:   required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> >, Eigen::Dense>’
  148 | class CwiseBinaryOpImpl
      |       ^~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7:   required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > >’
   77 | class CwiseBinaryOp :
      |       ^~~~~~~~~~~~~
data_manipulation.cpp:229:45:   required from here
  229 |     mat = mat.rowwise() - mat.colwise().mean();
      |                           ~~~~~~~~~~~~~~~~~~^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7:   required from ‘class Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> >’
   60 | class CwiseNullaryOp : public internal::dense_xpr_base< CwiseNullaryOp<NullaryOp, PlainObjectType> >::type, internal::no_assignment_operator
      |       ^~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28:   required from ‘struct Eigen::internal::traits<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > > >’
   38 |                    >::type Scalar;
      |                            ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7:   required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> >, Eigen::Dense>’
  148 | class CwiseBinaryOpImpl
      |       ^~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7:   required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > >’
   77 | class CwiseBinaryOp :
      |       ^~~~~~~~~~~~~
data_manipulation.cpp:229:45:   required from here
  229 |     mat = mat.rowwise() - mat.colwise().mean();
      |                           ~~~~~~~~~~~~~~~~~~^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > > >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > > >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7:   required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> >, Eigen::Dense>’
  148 | class CwiseBinaryOpImpl
      |       ^~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7:   required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > >’
   77 | class CwiseBinaryOp :
      |       ^~~~~~~~~~~~~
data_manipulation.cpp:229:45:   required from here
  229 |     mat = mat.rowwise() - mat.colwise().mean();
      |                           ~~~~~~~~~~~~~~~~~~^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 1, -1>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 1, -1>, 1>’
  302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 1, -1>, 3>’
  555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Matrix<double, 1, -1> >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Matrix<double, 1, -1> >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, 1, -1> >’
   98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
      |       ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<double, 1, -1>’
  178 | class Matrix
      |       ^~~~~~
data_manipulation.cpp:229:46:   required from here
  229 |     mat = mat.rowwise() - mat.colwise().mean();
      |                                              ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Replicate<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > >, -1, 1>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Replicate<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > >, -1, 1> >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Replicate<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > >, -1, 1> >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Replicate.h:61:65:   required from ‘class Eigen::Replicate<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > >, -1, 1>’
   61 | template<typename MatrixType,int RowFactor,int ColFactor> class Replicate
      |                                                                 ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28:   required from ‘struct Eigen::internal::traits<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Replicate<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > >, -1, 1> > >’
   38 |                    >::type Scalar;
      |                            ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7:   required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Replicate<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > >, -1, 1>, Eigen::Dense>’
  148 | class CwiseBinaryOpImpl
      |       ^~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7:   required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Replicate<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > >, -1, 1> >’
   77 | class CwiseBinaryOp :
      |       ^~~~~~~~~~~~~
data_manipulation.cpp:229:46:   required from here
  229 |     mat = mat.rowwise() - mat.colwise().mean();
      |                                              ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Replicate<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > >, -1, 1> >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Replicate<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > >, -1, 1> > >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Replicate<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > >, -1, 1> > >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7:   required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Replicate<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > >, -1, 1>, Eigen::Dense>’
  148 | class CwiseBinaryOpImpl
      |       ^~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7:   required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Replicate<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > >, -1, 1> >’
   77 | class CwiseBinaryOp :
      |       ^~~~~~~~~~~~~
data_manipulation.cpp:229:46:   required from here
  229 |     mat = mat.rowwise() - mat.colwise().mean();
      |                                              ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 2>’
  481 | class DenseCoeffsBase<Derived, DirectAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> > >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> > >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37:   required from ‘class Eigen::TransposeImpl<const Eigen::Matrix<double, -1, -1>, Eigen::Dense>’
  118 | template<typename MatrixType> class TransposeImpl<MatrixType,Dense>
      |                                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37:   required from ‘class Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >’
   52 | template<typename MatrixType> class Transpose
      |                                     ^~~~~~~~~
data_manipulation.cpp:231:37:   required from here
  231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
      |                          ~~~~~~~~~~~^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0> >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0> >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7:   required from ‘class Eigen::internal::dense_product_base<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0, 8>’
  120 | class dense_product_base
      |       ^~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7:   required from ‘class Eigen::ProductImpl<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0, Eigen::Dense>’
  152 | class ProductImpl<Lhs,Rhs,Option,Dense>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7:   required from ‘class Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>’
   71 | class Product : public ProductImpl<_Lhs,_Rhs,Option,
      |       ^~~~~~~
data_manipulation.cpp:231:42:   required from here
  231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
      |                                          ^~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7:   required from ‘class Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> >’
   60 | class CwiseNullaryOp : public internal::dense_xpr_base< CwiseNullaryOp<NullaryOp, PlainObjectType> >::type, internal::no_assignment_operator
      |       ^~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28:   required from ‘struct Eigen::internal::traits<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > > >’
   38 |                    >::type Scalar;
      |                            ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7:   required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> >, Eigen::Dense>’
  148 | class CwiseBinaryOpImpl
      |       ^~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7:   required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >’
   77 | class CwiseBinaryOp :
      |       ^~~~~~~~~~~~~
data_manipulation.cpp:231:70:   required from here
  231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
      |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > > >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > > >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7:   required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> >, Eigen::Dense>’
  148 | class CwiseBinaryOpImpl
      |       ^~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7:   required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >’
   77 | class CwiseBinaryOp :
      |       ^~~~~~~~~~~~~
data_manipulation.cpp:231:70:   required from here
  231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
      |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false>, 1>’
  302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false>, 3>’
  555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false> >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false> >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34:   required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false>, 0>’
   37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors>
      |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34:   required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false>, 1>’
  223 | template<typename Derived> class MapBase<Derived, WriteAccessors>
      |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7:   required from ‘class Eigen::internal::BlockImpl_dense<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false, true>’
  329 | class BlockImpl_dense<XprType,BlockRows,BlockCols, InnerPanel,true>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7:   required from ‘class Eigen::BlockImpl<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false, Eigen::Dense>’
  154 | class BlockImpl<XprType, BlockRows, BlockCols, InnerPanel, Dense>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81:   required from ‘class Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false>’
  103 | template<typename XprType, int BlockRows, int BlockCols, bool InnerPanel> class Block
      |                                                                                 ^~~~~
data_manipulation.cpp:368:29:   required from here
  368 |     Eigen::ArrayXd r = x.row(i).array();
      |                        ~~~~~^~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false> >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false> >, 1>’
  302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false> >, 3>’
  555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false> > >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34:   required from ‘class Eigen::ArrayBase<Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false> > >’
   39 | template<typename Derived> class ArrayBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7:   required from ‘class Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false> >’
   42 | class ArrayWrapper : public ArrayBase<ArrayWrapper<ExpressionType> >
      |       ^~~~~~~~~~~~
data_manipulation.cpp:368:38:   required from here
  368 |     Eigen::ArrayXd r = x.row(i).array();
      |                        ~~~~~~~~~~~~~~^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::SparseMatrix<double, 0, int>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:336:80:   required from ‘struct Eigen::internal::evaluator<Eigen::SparseCompressedBase<Eigen::SparseMatrix<double, 0, int> > >’
  336 |   typedef typename DenseCoeffsBase<Derived,ReadOnlyAccessors>::CoeffReturnType CoeffReturnType;
      |                                                                                ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1505:8:   required from ‘struct Eigen::internal::evaluator<Eigen::SparseMatrix<double, 0, int> >’
 1505 | struct evaluator<SparseMatrix<_Scalar,_Options,_StorageIndex> >
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseTranspose.h:58:63:   required from ‘struct Eigen::internal::unary_evaluator<Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> >, Eigen::internal::IteratorBased, double>’
   58 |     typedef typename evaluator<ArgType>::InnerIterator        EvalIterator;
      |                                                               ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8:   required from ‘struct Eigen::internal::evaluator<Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> > >’
   90 | struct evaluator : public unary_evaluator<T>
      |        ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1181:93:   required from ‘Eigen::SparseMatrix<_Scalar, _Options, _StorageIndex>& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::operator=(const Eigen::SparseMatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> >; _Scalar = double; int _Options = 0; _StorageIndex = int]’
 1181 |   const bool needToTranspose = (Flags & RowMajorBit) != (internal::evaluator<OtherDerived>::Flags & RowMajorBit);
      |                                                                                             ^~~~~
data_manipulation.cpp:150:23:   required from here
  150 |   mat = mat.transpose();
      |                       ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, 1>’
  302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, 3>’
  555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false> >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false> >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34:   required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, 0>’
   37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors>
      |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34:   required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, 1>’
  223 | template<typename Derived> class MapBase<Derived, WriteAccessors>
      |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7:   required from ‘class Eigen::internal::BlockImpl_dense<Eigen::Matrix<double, -1, -1>, -1, -1, false, true>’
  329 | class BlockImpl_dense<XprType,BlockRows,BlockCols, InnerPanel,true>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7:   required from ‘class Eigen::BlockImpl<Eigen::Matrix<double, -1, -1>, -1, -1, false, Eigen::Dense>’
  154 | class BlockImpl<XprType, BlockRows, BlockCols, InnerPanel, Dense>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81:   required from ‘class Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>’
  103 | template<typename XprType, int BlockRows, int BlockCols, bool InnerPanel> class Block
      |                                                                                 ^~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CommaInitializer.h:99:21:   required from ‘Eigen::CommaInitializer<MatrixType>& Eigen::CommaInitializer<MatrixType>::operator,(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Matrix<double, -1, -1>; XprType = Eigen::Matrix<double, -1, -1>]’
   98 |     m_xpr.template block<OtherDerived::RowsAtCompileTime, OtherDerived::ColsAtCompileTime>
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   99 |                     (m_row, m_col, other.rows(), other.cols()) = other;
      |                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
data_manipulation.cpp:249:17:   required from here
  249 |   mat3 << mat1, mat2;
      |                 ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::SparseMatrix<double, 1, int>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:336:80:   required from ‘struct Eigen::internal::evaluator<Eigen::SparseCompressedBase<Eigen::SparseMatrix<double, 1, int> > >’
  336 |   typedef typename DenseCoeffsBase<Derived,ReadOnlyAccessors>::CoeffReturnType CoeffReturnType;
      |                                                                                ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1505:8:   required from ‘struct Eigen::internal::evaluator<Eigen::SparseMatrix<double, 1, int> >’
 1505 | struct evaluator<SparseMatrix<_Scalar,_Options,_StorageIndex> >
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1181:93:   required from ‘Eigen::SparseMatrix<_Scalar, _Options, _StorageIndex>& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::operator=(const Eigen::SparseMatrixBase<OtherDerived>&) [with OtherDerived = Eigen::SparseMatrix<double, 1, int>; _Scalar = double; int _Options = 0; _StorageIndex = int]’
 1181 |   const bool needToTranspose = (Flags & RowMajorBit) != (internal::evaluator<OtherDerived>::Flags & RowMajorBit);
      |                                                                                             ^~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1063:7:   required from ‘void Eigen::internal::set_from_triplets(const InputIterator&, const InputIterator&, SparseMatrixType&, DupFunctor) [with InputIterator = __gnu_cxx::__normal_iterator<Eigen::Triplet<double>*, std::vector<Eigen::Triplet<double> > >; SparseMatrixType = Eigen::SparseMatrix<double, 0, int>; DupFunctor = scalar_sum_op<double, double>]’
 1063 |   mat = trMat;
      |   ~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1110:92:   required from ‘void Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::setFromTriplets(const InputIterators&, const InputIterators&) [with InputIterators = __gnu_cxx::__normal_iterator<Eigen::Triplet<double>*, std::vector<Eigen::Triplet<double> > >; _Scalar = double; int _Options = 0; _StorageIndex = int]’
 1110 |   internal::set_from_triplets<InputIterators, SparseMatrix<Scalar,_Options,_StorageIndex> >(begin, end, *this, internal::scalar_sum_op<Scalar,Scalar>());
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
data_manipulation.cpp:110:31:   required from here
  110 |   combined_mat.setFromTriplets(tripletList.begin(), tripletList.end());
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase<Eigen::Ref<const Eigen::SparseMatrix<double, 0, int>, 0, Eigen::OuterStride<> > >’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7:   required from ‘class Eigen::SparseCompressedBase<Eigen::Ref<const Eigen::SparseMatrix<double, 0, int>, 0, Eigen::OuterStride<> > >’
   36 | class SparseCompressedBase
      |       ^~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:50:7:   required from ‘class Eigen::SparseMapBase<Eigen::Ref<const Eigen::SparseMatrix<double, 0, int>, 0, Eigen::OuterStride<> >, 0>’
   50 | class SparseMapBase<Derived,ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseRef.h:83:34:   required from ‘class Eigen::internal::SparseRefBase<Eigen::Ref<const Eigen::SparseMatrix<double, 0, int>, 0, Eigen::OuterStride<> > >’
   83 | template<typename Derived> class SparseRefBase
      |                                  ^~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseRef.h:177:7:   required from ‘class Eigen::Ref<const Eigen::SparseMatrix<double, 0, int>, 0, Eigen::OuterStride<> >’
  177 | class Ref<const SparseMatrix<MatScalar,MatOptions,MatIndex>, Options, StrideType>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseBlock.h:128:88:   required from ‘Eigen::internal::sparse_matrix_block_impl<SparseMatrixType, BlockRows, BlockCols>::BlockType& Eigen::internal::sparse_matrix_block_impl<SparseMatrixType, BlockRows, BlockCols>::operator=(const Eigen::SparseMatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Block<Eigen::SparseMatrix<double, 0, int>, -1, 1, true>; SparseMatrixType = Eigen::SparseMatrix<double, 0, int>; int BlockRows = -1; int BlockCols = 1; BlockType = Eigen::Block<Eigen::SparseMatrix<double, 0, int>, -1, 1, true>]’
  128 |       Ref<const SparseMatrix<Scalar, IsRowMajor ? RowMajor : ColMajor, StorageIndex> > tmp(other.derived());
      |                                                                                        ^~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseBlock.h:216:34:   required from ‘Eigen::internal::sparse_matrix_block_impl<SparseMatrixType, BlockRows, BlockCols>::BlockType& Eigen::internal::sparse_matrix_block_impl<SparseMatrixType, BlockRows, BlockCols>::operator=(const BlockType&) [with SparseMatrixType = Eigen::SparseMatrix<double, 0, int>; int BlockRows = -1; int BlockCols = 1; BlockType = Eigen::Block<Eigen::SparseMatrix<double, 0, int>, -1, 1, true>]’
  216 |       return operator=<BlockType>(other);
      |              ~~~~~~~~~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:111:5:   required from ‘Eigen::Block<XprType, BlockRows, BlockCols, InnerPanel>& Eigen::Block<XprType, BlockRows, BlockCols, InnerPanel>::operator=(const Eigen::Block<XprType, BlockRows, BlockCols, InnerPanel>&) [with XprType = Eigen::SparseMatrix<double, 0, int>; int BlockRows = -1; int BlockCols = 1; bool InnerPanel = true]’
 1207 |       Base::operator=(other); \
      |       ~~~~~~~~~~~~~~~^~~~~~~
data_manipulation.cpp:409:42:   required from here
  409 |     mat.col(ci) = replacement.col(rep_idx);
      |                                          ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   47 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase<Eigen::Block<Eigen::Ref<const Eigen::SparseMatrix<double, 0, int>, 0, Eigen::OuterStride<> >, -1, 1, true> >’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseBlock.h:17:7:   required from ‘class Eigen::BlockImpl<Eigen::Ref<const Eigen::SparseMatrix<double, 0, int>, 0, Eigen::OuterStride<> >, -1, 1, true, Eigen::Sparse>’
   17 | class BlockImpl<XprType,BlockRows,BlockCols,true,Sparse>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81:   required from ‘class Eigen::Block<Eigen::Ref<const Eigen::SparseMatrix<double, 0, int>, 0, Eigen::OuterStride<> >, -1, 1, true>’
  103 | template<typename XprType, int BlockRows, int BlockCols, bool InnerPanel> class Block
      |                                                                                 ^~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseBlock.h:194:85:   required from ‘Eigen::internal::sparse_matrix_block_impl<SparseMatrixType, BlockRows, BlockCols>::BlockType& Eigen::internal::sparse_matrix_block_impl<SparseMatrixType, BlockRows, BlockCols>::operator=(const Eigen::SparseMatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Block<Eigen::SparseMatrix<double, 0, int>, -1, 1, true>; SparseMatrixType = Eigen::SparseMatrix<double, 0, int>; int BlockRows = -1; int BlockCols = 1; BlockType = Eigen::Block<Eigen::SparseMatrix<double, 0, int>, -1, 1, true>]’
  194 |           StorageIndex nnz_k = internal::convert_index<StorageIndex>(tmp.innerVector(k).nonZeros());
      |                                                                      ~~~~~~~~~~~~~~~^~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseBlock.h:216:34:   required from ‘Eigen::internal::sparse_matrix_block_impl<SparseMatrixType, BlockRows, BlockCols>::BlockType& Eigen::internal::sparse_matrix_block_impl<SparseMatrixType, BlockRows, BlockCols>::operator=(const BlockType&) [with SparseMatrixType = Eigen::SparseMatrix<double, 0, int>; int BlockRows = -1; int BlockCols = 1; BlockType = Eigen::Block<Eigen::SparseMatrix<double, 0, int>, -1, 1, true>]’
  216 |       return operator=<BlockType>(other);
      |              ~~~~~~~~~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:111:5:   required from ‘Eigen::Block<XprType, BlockRows, BlockCols, InnerPanel>& Eigen::Block<XprType, BlockRows, BlockCols, InnerPanel>::operator=(const Eigen::Block<XprType, BlockRows, BlockCols, InnerPanel>&) [with XprType = Eigen::SparseMatrix<double, 0, int>; int BlockRows = -1; int BlockCols = 1; bool InnerPanel = true]’
 1207 |       Base::operator=(other); \
      |       ~~~~~~~~~~~~~~~^~~~~~~
data_manipulation.cpp:409:42:   required from here
  409 |     mat.col(ci) = replacement.col(rep_idx);
      |                                          ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   47 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase<Derived>&) [with Derived = Eigen::Array<double, -1, 1>; Eigen::Index = long int]’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:243:63:   required from ‘static Eigen::internal::redux_impl<Func, Evaluator, 3, 0>::Scalar Eigen::internal::redux_impl<Func, Evaluator, 3, 0>::run(const Evaluator&, const Func&, const XprType&) [with XprType = Eigen::Array<double, -1, 1>; Func = Eigen::internal::scalar_sum_op<double, double>; Evaluator = Eigen::internal::redux_evaluator<Eigen::Array<double, -1, 1> >; Scalar = double]’
  243 |     const Index alignedStart = internal::first_default_aligned(xpr);
      |                                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56:   required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::Array<double, -1, 1>; typename Eigen::internal::traits<T>::Scalar = double]’
  418 |   return internal::redux_impl<Func, ThisEvaluator>::run(thisEval, func, derived());
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:478:32:   required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::mean() const [with Derived = Eigen::Array<double, -1, 1>; typename Eigen::internal::traits<T>::Scalar = double]’
  478 |   return Scalar(derived().redux(Eigen::internal::scalar_sum_op<Scalar,Scalar>())) / Scalar(this->size());
      |                 ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
data_manipulation.cpp:137:28:   required from here
  137 |     double colMean = r.mean();
      |                      ~~~~~~^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  654 |   return internal::first_aligned<int(unpacket_traits<DefaultPacketType>::alignment),Derived>(m);
      |                                                                          ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase<Derived>&) [with Derived = Eigen::CwiseUnaryOp<scalar_square_op<double>, const Eigen::CwiseBinaryOp<scalar_difference_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > > >; Eigen::Index = long int]’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:243:63:   required from ‘static Eigen::internal::redux_impl<Func, Evaluator, 3, 0>::Scalar Eigen::internal::redux_impl<Func, Evaluator, 3, 0>::run(const Evaluator&, const Func&, const XprType&) [with XprType = Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > > >; Func = Eigen::internal::scalar_sum_op<double, double>; Evaluator = Eigen::internal::redux_evaluator<Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > > > >; Scalar = double]’
  243 |     const Index alignedStart = internal::first_default_aligned(xpr);
      |                                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56:   required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > > >; typename Eigen::internal::traits<T>::Scalar = double]’
  418 |   return internal::redux_impl<Func, ThisEvaluator>::run(thisEval, func, derived());
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:463:25:   required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::sum() const [with Derived = Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > > >; typename Eigen::internal::traits<T>::Scalar = double]’
  463 |   return derived().redux(Eigen::internal::scalar_sum_op<Scalar,Scalar>());
      |          ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
data_manipulation.cpp:138:53:   required from here
  138 |     double colSdev = sqrt((r - colMean).square().sum() / (mat.rows() - 1));
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~~~^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  654 |   return internal::first_aligned<int(unpacket_traits<DefaultPacketType>::alignment),Derived>(m);
      |                                                                          ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Array<double, -1, 1> >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Array<double, -1, 1> >, 1>’
  302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Array<double, -1, 1> >, 3>’
  555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Transpose<Eigen::Array<double, -1, 1> > >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34:   required from ‘class Eigen::ArrayBase<Eigen::Transpose<Eigen::Array<double, -1, 1> > >’
   39 | template<typename Derived> class ArrayBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37:   required from ‘class Eigen::TransposeImpl<Eigen::Array<double, -1, 1>, Eigen::Dense>’
  118 | template<typename MatrixType> class TransposeImpl<MatrixType,Dense>
      |                                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37:   required from ‘class Eigen::Transpose<Eigen::Array<double, -1, 1> >’
   52 | template<typename MatrixType> class Transpose
      |                                     ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:883:17:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Array<double, -1, 1>; Src = Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false> >; Func = assign_op<double, double>]’
  883 |   ActualDstType actualDst(dst);
      |                 ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false> >; Derived = Eigen::Array<double, -1, 1>]’
  797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false> >; Derived = Eigen::Array<double, -1, 1>]’
  594 |       _set_noalias(other);
      |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Array.h:288:29:   required from ‘Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Array(const Eigen::EigenBase<OtherDerived>&, typename Eigen::internal::enable_if<std::is_convertible<typename OtherDerived::Scalar, typename Eigen::internal::traits<Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols> >::Scalar>::value, PrivateType>::type) [with OtherDerived = Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1; typename Eigen::internal::enable_if<std::is_convertible<typename OtherDerived::Scalar, typename Eigen::internal::traits<Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols> >::Scalar>::value, PrivateType>::type = Eigen::Array<double, -1, 1>::PrivateType; typename OtherDerived::Scalar = double; typename Eigen::internal::traits<Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols> >::Scalar = double]’
  288 |       : Base(other.derived())
      |                             ^
data_manipulation.cpp:368:39:   required from here
  368 |     Eigen::ArrayXd r = x.row(i).array();
      |                                       ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Ref<const Eigen::SparseMatrix<double, 0, int>, 0, Eigen::OuterStride<> >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:336:80:   required from ‘struct Eigen::internal::evaluator<Eigen::SparseCompressedBase<Eigen::Ref<const Eigen::SparseMatrix<double, 0, int>, 0, Eigen::OuterStride<> > > >’
  336 |   typedef typename DenseCoeffsBase<Derived,ReadOnlyAccessors>::CoeffReturnType CoeffReturnType;
      |                                                                                ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseRef.h:364:8:   required from ‘struct Eigen::internal::evaluator<Eigen::Ref<const Eigen::SparseMatrix<double, 0, int>, 0, Eigen::OuterStride<> > >’
  364 | struct evaluator<Ref<const SparseMatrix<MatScalar,MatOptions,MatIndex>, Options, StrideType> >
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseBlock.h:45:21:   required from ‘Eigen::Index Eigen::BlockImpl<XprType, BlockRows, BlockCols, true, Eigen::Sparse>::nonZeros() const [with XprType = Eigen::Ref<const Eigen::SparseMatrix<double, 0, int>, 0, Eigen::OuterStride<> >; int BlockRows = -1; int BlockCols = 1; Eigen::Index = long int]’
   45 |       EvaluatorType matEval(m_matrix);
      |                     ^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseBlock.h:194:97:   required from ‘Eigen::internal::sparse_matrix_block_impl<SparseMatrixType, BlockRows, BlockCols>::BlockType& Eigen::internal::sparse_matrix_block_impl<SparseMatrixType, BlockRows, BlockCols>::operator=(const Eigen::SparseMatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Block<Eigen::SparseMatrix<double, 0, int>, -1, 1, true>; SparseMatrixType = Eigen::SparseMatrix<double, 0, int>; int BlockRows = -1; int BlockCols = 1; BlockType = Eigen::Block<Eigen::SparseMatrix<double, 0, int>, -1, 1, true>]’
  194 |           StorageIndex nnz_k = internal::convert_index<StorageIndex>(tmp.innerVector(k).nonZeros());
      |                                                                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseBlock.h:216:34:   required from ‘Eigen::internal::sparse_matrix_block_impl<SparseMatrixType, BlockRows, BlockCols>::BlockType& Eigen::internal::sparse_matrix_block_impl<SparseMatrixType, BlockRows, BlockCols>::operator=(const BlockType&) [with SparseMatrixType = Eigen::SparseMatrix<double, 0, int>; int BlockRows = -1; int BlockCols = 1; BlockType = Eigen::Block<Eigen::SparseMatrix<double, 0, int>, -1, 1, true>]’
  216 |       return operator=<BlockType>(other);
      |              ~~~~~~~~~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:111:5:   required from ‘Eigen::Block<XprType, BlockRows, BlockCols, InnerPanel>& Eigen::Block<XprType, BlockRows, BlockCols, InnerPanel>::operator=(const Eigen::Block<XprType, BlockRows, BlockCols, InnerPanel>&) [with XprType = Eigen::SparseMatrix<double, 0, int>; int BlockRows = -1; int BlockCols = 1; bool InnerPanel = true]’
 1207 |       Base::operator=(other); \
      |       ~~~~~~~~~~~~~~~^~~~~~~
data_manipulation.cpp:409:42:   required from here
  409 |     mat.col(ci) = replacement.col(rep_idx);
      |                                          ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:277:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true> >’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1384:41:   required from ‘struct Eigen::internal::evaluator_wrapper_base<Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true> > >’
 1384 |     CoeffReadCost = evaluator<ArgType>::CoeffReadCost,
      |                                         ^~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1464:8:   required from ‘struct Eigen::internal::unary_evaluator<Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true> >, Eigen::internal::IndexBased, double>’
 1464 | struct unary_evaluator<ArrayWrapper<TArgType> >
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8:   required from ‘struct Eigen::internal::evaluator<Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true> > >’
   90 | struct evaluator : public unary_evaluator<T>
      |        ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:774:20:   required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Array<double, -1, 1>; SrcXprType = Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true> >; Functor = assign_op<double, double>]’
  774 |   SrcEvaluatorType srcEvaluator(src);
      |                    ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Array<double, -1, 1>; SrcXprType = Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true> >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
  954 |     call_dense_assignment_loop(dst, src, func);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Array<double, -1, 1>; Src = Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true> >; Func = assign_op<double, double>]’
  890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true> >; Derived = Eigen::Array<double, -1, 1>]’
  797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true> >; Derived = Eigen::Array<double, -1, 1>]’
  594 |       _set_noalias(other);
      |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Array.h:288:29:   required from ‘Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Array(const Eigen::EigenBase<OtherDerived>&, typename Eigen::internal::enable_if<std::is_convertible<typename OtherDerived::Scalar, typename Eigen::internal::traits<Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols> >::Scalar>::value, PrivateType>::type) [with OtherDerived = Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1; typename Eigen::internal::enable_if<std::is_convertible<typename OtherDerived::Scalar, typename Eigen::internal::traits<Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols> >::Scalar>::value, PrivateType>::type = Eigen::Array<double, -1, 1>::PrivateType; typename OtherDerived::Scalar = double; typename Eigen::internal::traits<Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols> >::Scalar = double]’
  288 |       : Base(other.derived())
      |                             ^
data_manipulation.cpp:136:41:   required from here
  136 |     Eigen::ArrayXd r = mat.col(i).array();
      |                                         ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
 1071 |     PacketAlignment = unpacket_traits<PacketScalar>::alignment,
      |                                                      ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> >’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:780:20:   required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>; SrcXprType = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::CwiseBinaryOp<scalar_difference_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, 1> >, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >; Functor = assign_op<double, double>]’
  780 |   DstEvaluatorType dstEvaluator(dst);
      |                    ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, 1> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
  954 |     call_dense_assignment_loop(dst, src, func);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::CwiseBinaryOp<scalar_difference_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, 1> >, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >; Func = assign_op<double, double>]’
  890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:858:27:   required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing<Src>::value), void*>::type) [with Dst = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::CwiseBinaryOp<scalar_difference_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, 1> >, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >; Func = assign_op<double, double>; typename enable_if<(! evaluator_assume_aliasing<Src>::value), void*>::type = void*; typename evaluator_traits<SrcXprType>::Shape = Eigen::DenseShape]’
  858 |   call_assignment_no_alias(dst, src, func);
      |   ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18:   required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::CwiseBinaryOp<scalar_difference_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, 1> >, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >]’
  836 |   call_assignment(dst, src, internal::assign_op<typename Dst::Scalar,typename Src::Scalar>());
      |   ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Assign.h:66:28:   required from ‘Derived& Eigen::MatrixBase<Derived>::operator=(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, 1> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >; Derived = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>]’
   66 |   internal::call_assignment(derived(), other.derived());
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
data_manipulation.cpp:187:51:   required from here
  187 |     scaled_mat.col(k) = (col.array() - colMean) / colSdev;
      |                                                   ^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
 1071 |     PacketAlignment = unpacket_traits<PacketScalar>::alignment,
      |                                                      ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false> >’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1384:41:   required from ‘struct Eigen::internal::evaluator_wrapper_base<Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false> > >’
 1384 |     CoeffReadCost = evaluator<ArgType>::CoeffReadCost,
      |                                         ^~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1464:8:   required from ‘struct Eigen::internal::unary_evaluator<Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false> >, Eigen::internal::IndexBased, double>’
 1464 | struct unary_evaluator<ArrayWrapper<TArgType> >
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8:   required from ‘struct Eigen::internal::evaluator<Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false> > >’
   90 | struct evaluator : public unary_evaluator<T>
      |        ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:774:20:   required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Transpose<Eigen::Array<double, -1, 1> >; SrcXprType = Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false> >; Functor = assign_op<double, double>]’
  774 |   SrcEvaluatorType srcEvaluator(src);
      |                    ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Transpose<Eigen::Array<double, -1, 1> >; SrcXprType = Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false> >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
  954 |     call_dense_assignment_loop(dst, src, func);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Array<double, -1, 1>; Src = Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false> >; Func = assign_op<double, double>]’
  890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false> >; Derived = Eigen::Array<double, -1, 1>]’
  797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false> >; Derived = Eigen::Array<double, -1, 1>]’
  594 |       _set_noalias(other);
      |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Array.h:288:29:   required from ‘Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Array(const Eigen::EigenBase<OtherDerived>&, typename Eigen::internal::enable_if<std::is_convertible<typename OtherDerived::Scalar, typename Eigen::internal::traits<Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols> >::Scalar>::value, PrivateType>::type) [with OtherDerived = Eigen::ArrayWrapper<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1; typename Eigen::internal::enable_if<std::is_convertible<typename OtherDerived::Scalar, typename Eigen::internal::traits<Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols> >::Scalar>::value, PrivateType>::type = Eigen::Array<double, -1, 1>::PrivateType; typename OtherDerived::Scalar = double; typename Eigen::internal::traits<Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols> >::Scalar = double]’
  288 |       : Base(other.derived())
      |                             ^
data_manipulation.cpp:368:39:   required from here
  368 |     Eigen::ArrayXd r = x.row(i).array();
      |                                       ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
 1071 |     PacketAlignment = unpacket_traits<PacketScalar>::alignment,
      |                                                      ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::SparseMatrix<double, 0, int>, -1, 1, true>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:336:80:   required from ‘struct Eigen::internal::evaluator<Eigen::SparseCompressedBase<Eigen::Block<Eigen::SparseMatrix<double, 0, int>, -1, 1, true> > >’
  336 |   typedef typename DenseCoeffsBase<Derived,ReadOnlyAccessors>::CoeffReturnType CoeffReturnType;
      |                                                                                ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseBlock.h:549:8:   required from ‘struct Eigen::internal::unary_evaluator<Eigen::Block<Eigen::SparseMatrix<double, 0, int>, -1, 1, true>, Eigen::internal::IteratorBased, double>’
  549 | struct unary_evaluator<Block<SparseMatrix<_Scalar, _Options, _StorageIndex>,BlockRows,BlockCols,true>, IteratorBased>
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1087:8:   required from ‘struct Eigen::internal::block_evaluator<Eigen::SparseMatrix<double, 0, int>, -1, 1, true, false>’
 1087 | struct block_evaluator<ArgType, BlockRows, BlockCols, InnerPanel, /*HasDirectAccess*/ false>
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1034:8:   required from ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::SparseMatrix<double, 0, int>, -1, 1, true> >’
 1034 | struct evaluator<Block<ArgType, BlockRows, BlockCols, InnerPanel> >
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:687:97:   required from ‘Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::SparseMatrix(const Eigen::SparseMatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Block<Eigen::SparseMatrix<double, 0, int>, -1, 1, true>; _Scalar = double; int _Options = 0; _StorageIndex = int]’
  687 |       const bool needToTranspose = (Flags & RowMajorBit) != (internal::evaluator<OtherDerived>::Flags & RowMajorBit);
      |                                                                                                 ^~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseRef.h:217:9:   required from ‘void Eigen::Ref<const Eigen::SparseMatrix<_Scalar, _Options, _StorageIndex>, _Options, _StrideType>::construct(const Expression&, Eigen::internal::true_type) [with Expression = Eigen::Block<Eigen::SparseMatrix<double, 0, int>, -1, 1, true>; MatScalar = double; int MatOptions = 0; MatIndex = int; int Options = 0; StrideType = Eigen::OuterStride<>]’
  217 |         ::new (obj) TPlainObjectType(expr);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseRef.h:190:16:   required from ‘Eigen::Ref<const Eigen::SparseMatrix<_Scalar, _Options, _StorageIndex>, _Options, _StrideType>::Ref(const Eigen::SparseMatrixBase<OtherDerived>&) [with Derived = Eigen::Block<Eigen::SparseMatrix<double, 0, int>, -1, 1, true>; MatScalar = double; int MatOptions = 0; MatIndex = int; int Options = 0; StrideType = Eigen::OuterStride<>]’
  190 |       construct(expr.derived(), typename Traits::template match<Derived>::type());
      |       ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseBlock.h:128:88:   required from ‘Eigen::internal::sparse_matrix_block_impl<SparseMatrixType, BlockRows, BlockCols>::BlockType& Eigen::internal::sparse_matrix_block_impl<SparseMatrixType, BlockRows, BlockCols>::operator=(const Eigen::SparseMatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Block<Eigen::SparseMatrix<double, 0, int>, -1, 1, true>; SparseMatrixType = Eigen::SparseMatrix<double, 0, int>; int BlockRows = -1; int BlockCols = 1; BlockType = Eigen::Block<Eigen::SparseMatrix<double, 0, int>, -1, 1, true>]’
  128 |       Ref<const SparseMatrix<Scalar, IsRowMajor ? RowMajor : ColMajor, StorageIndex> > tmp(other.derived());
      |                                                                                        ^~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseBlock.h:216:34:   required from ‘Eigen::internal::sparse_matrix_block_impl<SparseMatrixType, BlockRows, BlockCols>::BlockType& Eigen::internal::sparse_matrix_block_impl<SparseMatrixType, BlockRows, BlockCols>::operator=(const BlockType&) [with SparseMatrixType = Eigen::SparseMatrix<double, 0, int>; int BlockRows = -1; int BlockCols = 1; BlockType = Eigen::Block<Eigen::SparseMatrix<double, 0, int>, -1, 1, true>]’
  216 |       return operator=<BlockType>(other);
      |              ~~~~~~~~~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:111:5:   required from ‘Eigen::Block<XprType, BlockRows, BlockCols, InnerPanel>& Eigen::Block<XprType, BlockRows, BlockCols, InnerPanel>::operator=(const Eigen::Block<XprType, BlockRows, BlockCols, InnerPanel>&) [with XprType = Eigen::SparseMatrix<double, 0, int>; int BlockRows = -1; int BlockCols = 1; bool InnerPanel = true]’
 1207 |       Base::operator=(other); \
      |       ~~~~~~~~~~~~~~~^~~~~~~
data_manipulation.cpp:409:42:   required from here
  409 |     mat.col(ci) = replacement.col(rep_idx);
      |                                          ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::SparseMatrix<double, 0, int>, -1, 1, true> >’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:687:97:   required from ‘Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::SparseMatrix(const Eigen::SparseMatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Block<Eigen::SparseMatrix<double, 0, int>, -1, 1, true>; _Scalar = double; int _Options = 0; _StorageIndex = int]’
  687 |       const bool needToTranspose = (Flags & RowMajorBit) != (internal::evaluator<OtherDerived>::Flags & RowMajorBit);
      |                                                                                                 ^~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseRef.h:217:9:   required from ‘void Eigen::Ref<const Eigen::SparseMatrix<_Scalar, _Options, _StorageIndex>, _Options, _StrideType>::construct(const Expression&, Eigen::internal::true_type) [with Expression = Eigen::Block<Eigen::SparseMatrix<double, 0, int>, -1, 1, true>; MatScalar = double; int MatOptions = 0; MatIndex = int; int Options = 0; StrideType = Eigen::OuterStride<>]’
  217 |         ::new (obj) TPlainObjectType(expr);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseRef.h:190:16:   required from ‘Eigen::Ref<const Eigen::SparseMatrix<_Scalar, _Options, _StorageIndex>, _Options, _StrideType>::Ref(const Eigen::SparseMatrixBase<OtherDerived>&) [with Derived = Eigen::Block<Eigen::SparseMatrix<double, 0, int>, -1, 1, true>; MatScalar = double; int MatOptions = 0; MatIndex = int; int Options = 0; StrideType = Eigen::OuterStride<>]’
  190 |       construct(expr.derived(), typename Traits::template match<Derived>::type());
      |       ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseBlock.h:128:88:   required from ‘Eigen::internal::sparse_matrix_block_impl<SparseMatrixType, BlockRows, BlockCols>::BlockType& Eigen::internal::sparse_matrix_block_impl<SparseMatrixType, BlockRows, BlockCols>::operator=(const Eigen::SparseMatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Block<Eigen::SparseMatrix<double, 0, int>, -1, 1, true>; SparseMatrixType = Eigen::SparseMatrix<double, 0, int>; int BlockRows = -1; int BlockCols = 1; BlockType = Eigen::Block<Eigen::SparseMatrix<double, 0, int>, -1, 1, true>]’
  128 |       Ref<const SparseMatrix<Scalar, IsRowMajor ? RowMajor : ColMajor, StorageIndex> > tmp(other.derived());
      |                                                                                        ^~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseBlock.h:216:34:   required from ‘Eigen::internal::sparse_matrix_block_impl<SparseMatrixType, BlockRows, BlockCols>::BlockType& Eigen::internal::sparse_matrix_block_impl<SparseMatrixType, BlockRows, BlockCols>::operator=(const BlockType&) [with SparseMatrixType = Eigen::SparseMatrix<double, 0, int>; int BlockRows = -1; int BlockCols = 1; BlockType = Eigen::Block<Eigen::SparseMatrix<double, 0, int>, -1, 1, true>]’
  216 |       return operator=<BlockType>(other);
      |              ~~~~~~~~~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:111:5:   required from ‘Eigen::Block<XprType, BlockRows, BlockCols, InnerPanel>& Eigen::Block<XprType, BlockRows, BlockCols, InnerPanel>::operator=(const Eigen::Block<XprType, BlockRows, BlockCols, InnerPanel>&) [with XprType = Eigen::SparseMatrix<double, 0, int>; int BlockRows = -1; int BlockCols = 1; bool InnerPanel = true]’
 1207 |       Base::operator=(other); \
      |       ~~~~~~~~~~~~~~~^~~~~~~
data_manipulation.cpp:409:42:   required from here
  409 |     mat.col(ci) = replacement.col(rep_idx);
      |                                          ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
 1071 |     PacketAlignment = unpacket_traits<PacketScalar>::alignment,
      |                                                      ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false> >’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:780:20:   required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>; SrcXprType = Eigen::Matrix<double, -1, -1>; Functor = assign_op<double, double>]’
  780 |   DstEvaluatorType dstEvaluator(dst);
      |                    ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>; SrcXprType = Eigen::Matrix<double, -1, -1>; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
  954 |     call_dense_assignment_loop(dst, src, func);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>; Src = Eigen::Matrix<double, -1, -1>; Func = assign_op<double, double>]’
  890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:858:27:   required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing<Src>::value), void*>::type) [with Dst = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>; Src = Eigen::Matrix<double, -1, -1>; Func = assign_op<double, double>; typename enable_if<(! evaluator_assume_aliasing<Src>::value), void*>::type = void*; typename evaluator_traits<SrcXprType>::Shape = Eigen::DenseShape]’
  858 |   call_assignment_no_alias(dst, src, func);
      |   ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18:   required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>; Src = Eigen::Matrix<double, -1, -1>]’
  836 |   call_assignment(dst, src, internal::assign_op<typename Dst::Scalar,typename Src::Scalar>());
      |   ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Assign.h:66:28:   required from ‘Derived& Eigen::MatrixBase<Derived>::operator=(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Matrix<double, -1, -1>; Derived = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>]’
   66 |   internal::call_assignment(derived(), other.derived());
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CommaInitializer.h:99:64:   required from ‘Eigen::CommaInitializer<MatrixType>& Eigen::CommaInitializer<MatrixType>::operator,(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Matrix<double, -1, -1>; XprType = Eigen::Matrix<double, -1, -1>]’
   98 |     m_xpr.template block<OtherDerived::RowsAtCompileTime, OtherDerived::ColsAtCompileTime>
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   99 |                     (m_row, m_col, other.rows(), other.cols()) = other;
      |                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~
data_manipulation.cpp:249:17:   required from here
  249 |   mat3 << mat1, mat2;
      |                 ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
 1071 |     PacketAlignment = unpacket_traits<PacketScalar>::alignment,
      |                                                      ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, 0>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, 0> >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, 0> >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7:   required from ‘class Eigen::internal::dense_product_base<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, 0, 7>’
  120 | class dense_product_base
      |       ^~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7:   required from ‘class Eigen::ProductImpl<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, 0, Eigen::Dense>’
  152 | class ProductImpl<Lhs,Rhs,Option,Dense>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7:   required from ‘class Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, 0>’
   71 | class Product : public ProductImpl<_Lhs,_Rhs,Option,
      |       ^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:345:45:   [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
  954 |     call_dense_assignment_loop(dst, src, func);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
  890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  594 |       _set_noalias(other);
      |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
  423 |       : Base(other.derived())
      |                             ^
data_manipulation.cpp:231:70:   required from here
  231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
      |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, 2>’
  481 | class DenseCoeffsBase<Derived, DirectAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34:   required from ‘class Eigen::MapBase<Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, 0>’
   37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors>
      |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7:   required from ‘class Eigen::internal::BlockImpl_dense<const Eigen::Matrix<double, -1, -1>, -1, 1, true, true>’
  329 | class BlockImpl_dense<XprType,BlockRows,BlockCols, InnerPanel,true>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7:   [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
  954 |     call_dense_assignment_loop(dst, src, func);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
  890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  594 |       _set_noalias(other);
      |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
  423 |       : Base(other.derived())
      |                             ^
data_manipulation.cpp:231:70:   required from here
  231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
      |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8:   required from ‘struct Eigen::internal::evaluator<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >’
  100 | struct evaluator<const T>
      |        ^~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:372:102:   required from ‘struct Eigen::internal::plain_object_eval<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, Eigen::Dense>’
  372 |   typedef typename plain_matrix_type_dense<T,typename traits<T>::XprKind, evaluator<T>::Flags>::type type;
      |                                                                                                      ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:370:45:   required from ‘struct Eigen::internal::generic_product_impl<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, Eigen::DenseShape, Eigen::DenseShape, 7>’
  370 |   typedef typename nested_eval<Rhs,1>::type RhsNested;
      |                                             ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:479:24:   required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, -1>; Scalar = double]’
  478 |       return internal::generic_product_impl<Lhs,typename Rhs::ConstColXpr,DenseShape,DenseShape,GemvProduct>
      |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  479 |         ::scaleAndAddTo(dst_vec, a_lhs, a_rhs.col(0), alpha);
      |         ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:445:20:   required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, -1>]’
  445 |       scaleAndAddTo(dst, lhs, rhs, Scalar(1));
      |       ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:124:75:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
  954 |     call_dense_assignment_loop(dst, src, func);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
  890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  594 |       _set_noalias(other);
      |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
  423 |       : Base(other.derived())
      |                             ^
data_manipulation.cpp:231:70:   required from here
  231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
      |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
 1071 |     PacketAlignment = unpacket_traits<PacketScalar>::alignment,
      |                                                      ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 1>’
  302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 3>’
  555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34:   required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 0>’
   37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors>
      |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34:   [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
  954 |     call_dense_assignment_loop(dst, src, func);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
  890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  594 |       _set_noalias(other);
      |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
  423 |       : Base(other.derived())
      |                             ^
data_manipulation.cpp:231:70:   required from here
  231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
      |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Product<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, Eigen::Matrix<double, -1, -1>, 0>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Product<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, Eigen::Matrix<double, -1, -1>, 0> >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Product<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, Eigen::Matrix<double, -1, -1>, 0> >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7:   required from ‘class Eigen::internal::dense_product_base<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, Eigen::Matrix<double, -1, -1>, 0, 7>’
  120 | class dense_product_base
      |       ^~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7:   required from ‘class Eigen::ProductImpl<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, Eigen::Matrix<double, -1, -1>, 0, Eigen::Dense>’
  152 | class ProductImpl<Lhs,Rhs,Option,Dense>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7:   required from ‘class Eigen::Product<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, Eigen::Matrix<double, -1, -1>, 0>’
   71 | class Product : public ProductImpl<_Lhs,_Rhs,Option,
      |       ^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:345:45:   [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
  954 |     call_dense_assignment_loop(dst, src, func);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
  890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  594 |       _set_noalias(other);
      |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
  423 |       : Base(other.derived())
      |                             ^
data_manipulation.cpp:231:70:   required from here
  231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
      |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 2>’
  481 | class DenseCoeffsBase<Derived, DirectAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true> >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true> >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34:   required from ‘class Eigen::MapBase<Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 0>’
   37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors>
      |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7:   required from ‘class Eigen::internal::BlockImpl_dense<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true, true>’
  329 | class BlockImpl_dense<XprType,BlockRows,BlockCols, InnerPanel,true>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7:   [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
  954 |     call_dense_assignment_loop(dst, src, func);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
  890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  594 |       _set_noalias(other);
      |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
  423 |       : Base(other.derived())
      |                             ^
data_manipulation.cpp:231:70:   required from here
  231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
      |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true> >’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8:   required from ‘struct Eigen::internal::evaluator<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true> >’
  100 | struct evaluator<const T>
      |        ^~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:372:102:   required from ‘struct Eigen::internal::plain_object_eval<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, Eigen::Dense>’
  372 |   typedef typename plain_matrix_type_dense<T,typename traits<T>::XprKind, evaluator<T>::Flags>::type type;
      |                                                                                                      ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:369:45:   required from ‘struct Eigen::internal::generic_product_impl<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, Eigen::Matrix<double, -1, -1>, Eigen::DenseShape, Eigen::DenseShape, 7>’
  369 |   typedef typename nested_eval<Lhs,1>::type LhsNested;
      |                                             ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:486:24:   required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, -1>; Scalar = double]’
  485 |       return internal::generic_product_impl<typename Lhs::ConstRowXpr,Rhs,DenseShape,DenseShape,GemvProduct>
      |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  486 |         ::scaleAndAddTo(dst_vec, a_lhs.row(0), a_rhs, alpha);
      |         ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:445:20:   required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, -1>]’
  445 |       scaleAndAddTo(dst, lhs, rhs, Scalar(1));
      |       ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:124:75:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
  954 |     call_dense_assignment_loop(dst, src, func);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
  890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  594 |       _set_noalias(other);
      |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
  423 |       : Base(other.derived())
      |                             ^
data_manipulation.cpp:231:70:   required from here
  231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
      |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
 1071 |     PacketAlignment = unpacket_traits<PacketScalar>::alignment,
      |                                                      ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 1>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 1> >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 1> >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7:   required from ‘class Eigen::internal::dense_product_base<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 1, 8>’
  120 | class dense_product_base
      |       ^~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7:   required from ‘class Eigen::ProductImpl<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 1, Eigen::Dense>’
  152 | class ProductImpl<Lhs,Rhs,Option,Dense>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7:   required from ‘class Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 1>’
   71 | class Product : public ProductImpl<_Lhs,_Rhs,Option,
      |       ^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:462:68:   [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
  954 |     call_dense_assignment_loop(dst, src, func);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
  890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  594 |       _set_noalias(other);
      |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
  423 |       : Base(other.derived())
      |                             ^
data_manipulation.cpp:231:70:   required from here
  231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
      |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, -1> >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, -1> > >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, -1> > >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7:   required from ‘class Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, -1> >’
   60 | class CwiseNullaryOp : public internal::dense_xpr_base< CwiseNullaryOp<NullaryOp, PlainObjectType> >::type, internal::no_assignment_operator
      |       ^~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:347:30:   required from ‘Derived& Eigen::DenseBase<Derived>::setConstant(const Scalar&) [with Derived = Eigen::Matrix<double, -1, -1>; Scalar = double]’
  347 |   return derived() = Constant(rows(), cols(), val);
      |                      ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:548:10:   required from ‘Derived& Eigen::DenseBase<Derived>::setZero() [with Derived = Eigen::Matrix<double, -1, -1>]’
  548 |   return setConstant(Scalar(0));
      |          ^~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:444:18:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
  954 |     call_dense_assignment_loop(dst, src, func);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
  890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  594 |       _set_noalias(other);
      |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
  423 |       : Base(other.derived())
      |                             ^
data_manipulation.cpp:231:70:   required from here
  231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
      |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, true>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, true>, 2>’
  481 | class DenseCoeffsBase<Derived, DirectAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Block<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, true> >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Block<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, true> >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34:   required from ‘class Eigen::MapBase<Eigen::Block<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, true>, 0>’
   37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors>
      |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7:   required from ‘class Eigen::internal::BlockImpl_dense<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, true, true>’
  329 | class BlockImpl_dense<XprType,BlockRows,BlockCols, InnerPanel,true>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7:   [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
  954 |     call_dense_assignment_loop(dst, src, func);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
  890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  594 |       _set_noalias(other);
      |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
  423 |       : Base(other.derived())
      |                             ^
data_manipulation.cpp:231:70:   required from here
  231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
      |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 1, -1, true>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 1, -1, true>, 2>’
  481 | class DenseCoeffsBase<Derived, DirectAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Block<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 1, -1, true> >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Block<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 1, -1, true> >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34:   required from ‘class Eigen::MapBase<Eigen::Block<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 1, -1, true>, 0>’
   37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors>
      |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7:   required from ‘class Eigen::internal::BlockImpl_dense<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 1, -1, true, true>’
  329 | class BlockImpl_dense<XprType,BlockRows,BlockCols, InnerPanel,true>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7:   [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
  954 |     call_dense_assignment_loop(dst, src, func);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
  890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  594 |       _set_noalias(other);
      |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
  423 |       : Base(other.derived())
      |                             ^
data_manipulation.cpp:231:70:   required from here
  231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
      |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> >, 1>’
  302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> >, 3>’
  555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> > >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> > >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34:   required from ‘class Eigen::MapBase<Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> >, 0>’
   37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors>
      |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34:   [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
  954 |     call_dense_assignment_loop(dst, src, func);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
  890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  594 |       _set_noalias(other);
      |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
  423 |       : Base(other.derived())
      |                             ^
data_manipulation.cpp:231:70:   required from here
  231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
      |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:333:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h: In instantiation of ‘class Eigen::internal::gemv_traits<double, double, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:306:38:   required from ‘struct Eigen::internal::general_matrix_vector_product<long int, double, Eigen::internal::const_blas_data_mapper<double, long int, 1>, 1, false, double, Eigen::internal::const_blas_data_mapper<double, long int, 0>, false, 0>’
  306 |   typedef typename Traits::LhsPacket LhsPacket;
      |                                      ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:347:132:   required from ‘static void Eigen::internal::gemv_dense_selector<2, 1, true>::run(const Lhs&, const Rhs&, Dest&, const typename Dest::Scalar&) [with Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>; Dest = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>; typename Dest::Scalar = double]’
  346 |     general_matrix_vector_product
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~                                                                                                   
  347 |         <Index,LhsScalar,LhsMapper,RowMajor,LhsBlasTraits::NeedToConjugate,RhsScalar,RhsMapper,RhsBlasTraits::NeedToConjugate>::run(
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
  348 |         actualLhs.rows(), actualLhs.cols(),
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~                                                                                         
  349 |         LhsMapper(actualLhs.data(), actualLhs.outerStride()),
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~                                                                       
  350 |         RhsMapper(actualRhsPtr, 1),
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~                                                                                                 
  351 |         dest.data(), dest.col(0).innerStride(), //NOTE  if dest is not a vector at compile-time, then dest.innerStride() might be wrong. (bug 1166)
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  352 |         actualAlpha);
      |         ~~~~~~~~~~~~                                                                                                                
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:388:34:   required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 7>::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>; Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>; Scalar = double]’
  385 |     internal::gemv_dense_selector<Side,
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  386 |                             (int(MatrixType::Flags)&RowMajorBit) ? RowMajor : ColMajor,
      |                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  387 |                             bool(internal::blas_traits<MatrixType>::HasUsableDirectAccess)
      |                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  388 |                            >::run(actual_lhs, actual_rhs, dst, alpha);
      |                            ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:479:24:   required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, -1>; Scalar = double]’
  478 |       return internal::generic_product_impl<Lhs,typename Rhs::ConstColXpr,DenseShape,DenseShape,GemvProduct>
      |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  479 |         ::scaleAndAddTo(dst_vec, a_lhs, a_rhs.col(0), alpha);
      |         ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:445:20:   required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, -1>]’
  445 |       scaleAndAddTo(dst, lhs, rhs, Scalar(1));
      |       ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:124:75:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
  954 |     call_dense_assignment_loop(dst, src, func);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
  890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  594 |       _set_noalias(other);
      |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
  423 |       : Base(other.derived())
      |                             ^
data_manipulation.cpp:231:70:   required from here
  231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
      |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   44 |   PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   44 |   PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   44 |   PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   44 |   PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   45 |   PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   45 |   PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   45 |   PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   45 |   PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   46 |   PACKET_DECL_COND_PREFIX(_, Res, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   46 |   PACKET_DECL_COND_PREFIX(_, Res, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   46 |   PACKET_DECL_COND_PREFIX(_, Res, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   46 |   PACKET_DECL_COND_PREFIX(_, Res, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   51 |         Vectorizable = unpacket_traits<_LhsPacket>::vectorizable &&
      |                                                     ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   52 |         unpacket_traits<_RhsPacket>::vectorizable &&
      |                                      ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   53 |         int(unpacket_traits<_LhsPacket>::size)==int(unpacket_traits<_RhsPacket>::size),
      |                                          ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   53 |         int(unpacket_traits<_LhsPacket>::size)==int(unpacket_traits<_RhsPacket>::size),
      |                                                                                  ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   54 |         LhsPacketSize = Vectorizable ? unpacket_traits<_LhsPacket>::size : 1,
      |                                                                     ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   55 |         RhsPacketSize = Vectorizable ? unpacket_traits<_RhsPacket>::size : 1,
      |                                                                     ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |         ResPacketSize = Vectorizable ? unpacket_traits<_ResPacket>::size : 1
      |                                                                     ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   59 |   typedef typename conditional<Vectorizable,_LhsPacket,LhsScalar>::type LhsPacket;
      |                                                                         ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   60 |   typedef typename conditional<Vectorizable,_RhsPacket,RhsScalar>::type RhsPacket;
      |                                                                         ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   61 |   typedef typename conditional<Vectorizable,_ResPacket,ResScalar>::type ResPacket;
      |                                                                         ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h: In instantiation of ‘class Eigen::internal::gemv_traits<double, double, 1>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:310:42:   required from ‘struct Eigen::internal::general_matrix_vector_product<long int, double, Eigen::internal::const_blas_data_mapper<double, long int, 1>, 1, false, double, Eigen::internal::const_blas_data_mapper<double, long int, 0>, false, 0>’
  310 |   typedef typename HalfTraits::LhsPacket LhsPacketHalf;
      |                                          ^~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:347:132:   required from ‘static void Eigen::internal::gemv_dense_selector<2, 1, true>::run(const Lhs&, const Rhs&, Dest&, const typename Dest::Scalar&) [with Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>; Dest = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>; typename Dest::Scalar = double]’
  346 |     general_matrix_vector_product
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~                                                                                                   
  347 |         <Index,LhsScalar,LhsMapper,RowMajor,LhsBlasTraits::NeedToConjugate,RhsScalar,RhsMapper,RhsBlasTraits::NeedToConjugate>::run(
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
  348 |         actualLhs.rows(), actualLhs.cols(),
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~                                                                                         
  349 |         LhsMapper(actualLhs.data(), actualLhs.outerStride()),
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~                                                                       
  350 |         RhsMapper(actualRhsPtr, 1),
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~                                                                                                 
  351 |         dest.data(), dest.col(0).innerStride(), //NOTE  if dest is not a vector at compile-time, then dest.innerStride() might be wrong. (bug 1166)
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  352 |         actualAlpha);
      |         ~~~~~~~~~~~~                                                                                                                
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:388:34:   required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 7>::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>; Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>; Scalar = double]’
  385 |     internal::gemv_dense_selector<Side,
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  386 |                             (int(MatrixType::Flags)&RowMajorBit) ? RowMajor : ColMajor,
      |                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  387 |                             bool(internal::blas_traits<MatrixType>::HasUsableDirectAccess)
      |                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  388 |                            >::run(actual_lhs, actual_rhs, dst, alpha);
      |                            ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:479:24:   required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, -1>; Scalar = double]’
  478 |       return internal::generic_product_impl<Lhs,typename Rhs::ConstColXpr,DenseShape,DenseShape,GemvProduct>
      |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  479 |         ::scaleAndAddTo(dst_vec, a_lhs, a_rhs.col(0), alpha);
      |         ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:445:20:   required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, -1>]’
  445 |       scaleAndAddTo(dst, lhs, rhs, Scalar(1));
      |       ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:124:75:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
  954 |     call_dense_assignment_loop(dst, src, func);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
  890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  594 |       _set_noalias(other);
      |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
  423 |       : Base(other.derived())
      |                             ^
data_manipulation.cpp:231:70:   required from here
  231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
      |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   44 |   PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   44 |   PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   44 |   PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   44 |   PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   45 |   PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   45 |   PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   45 |   PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   45 |   PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   46 |   PACKET_DECL_COND_PREFIX(_, Res, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   46 |   PACKET_DECL_COND_PREFIX(_, Res, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   46 |   PACKET_DECL_COND_PREFIX(_, Res, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   46 |   PACKET_DECL_COND_PREFIX(_, Res, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   51 |         Vectorizable = unpacket_traits<_LhsPacket>::vectorizable &&
      |                                                     ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   52 |         unpacket_traits<_RhsPacket>::vectorizable &&
      |                                      ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   53 |         int(unpacket_traits<_LhsPacket>::size)==int(unpacket_traits<_RhsPacket>::size),
      |                                          ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   53 |         int(unpacket_traits<_LhsPacket>::size)==int(unpacket_traits<_RhsPacket>::size),
      |                                                                                  ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   54 |         LhsPacketSize = Vectorizable ? unpacket_traits<_LhsPacket>::size : 1,
      |                                                                     ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   55 |         RhsPacketSize = Vectorizable ? unpacket_traits<_RhsPacket>::size : 1,
      |                                                                     ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |         ResPacketSize = Vectorizable ? unpacket_traits<_ResPacket>::size : 1
      |                                                                     ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   59 |   typedef typename conditional<Vectorizable,_LhsPacket,LhsScalar>::type LhsPacket;
      |                                                                         ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   60 |   typedef typename conditional<Vectorizable,_RhsPacket,RhsScalar>::type RhsPacket;
      |                                                                         ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   61 |   typedef typename conditional<Vectorizable,_ResPacket,ResScalar>::type ResPacket;
      |                                                                         ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h: In instantiation of ‘class Eigen::internal::gemv_traits<double, double, 2>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:314:45:   required from ‘struct Eigen::internal::general_matrix_vector_product<long int, double, Eigen::internal::const_blas_data_mapper<double, long int, 1>, 1, false, double, Eigen::internal::const_blas_data_mapper<double, long int, 0>, false, 0>’
  314 |   typedef typename QuarterTraits::LhsPacket LhsPacketQuarter;
      |                                             ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:347:132:   required from ‘static void Eigen::internal::gemv_dense_selector<2, 1, true>::run(const Lhs&, const Rhs&, Dest&, const typename Dest::Scalar&) [with Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>; Dest = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>; typename Dest::Scalar = double]’
  346 |     general_matrix_vector_product
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~                                                                                                   
  347 |         <Index,LhsScalar,LhsMapper,RowMajor,LhsBlasTraits::NeedToConjugate,RhsScalar,RhsMapper,RhsBlasTraits::NeedToConjugate>::run(
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
  348 |         actualLhs.rows(), actualLhs.cols(),
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~                                                                                         
  349 |         LhsMapper(actualLhs.data(), actualLhs.outerStride()),
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~                                                                       
  350 |         RhsMapper(actualRhsPtr, 1),
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~                                                                                                 
  351 |         dest.data(), dest.col(0).innerStride(), //NOTE  if dest is not a vector at compile-time, then dest.innerStride() might be wrong. (bug 1166)
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  352 |         actualAlpha);
      |         ~~~~~~~~~~~~                                                                                                                
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:388:34:   required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 7>::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>; Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>; Scalar = double]’
  385 |     internal::gemv_dense_selector<Side,
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  386 |                             (int(MatrixType::Flags)&RowMajorBit) ? RowMajor : ColMajor,
      |                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  387 |                             bool(internal::blas_traits<MatrixType>::HasUsableDirectAccess)
      |                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  388 |                            >::run(actual_lhs, actual_rhs, dst, alpha);
      |                            ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:479:24:   required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, -1>; Scalar = double]’
  478 |       return internal::generic_product_impl<Lhs,typename Rhs::ConstColXpr,DenseShape,DenseShape,GemvProduct>
      |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  479 |         ::scaleAndAddTo(dst_vec, a_lhs, a_rhs.col(0), alpha);
      |         ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:445:20:   required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, -1>]’
  445 |       scaleAndAddTo(dst, lhs, rhs, Scalar(1));
      |       ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:124:75:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
  954 |     call_dense_assignment_loop(dst, src, func);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
  890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  594 |       _set_noalias(other);
      |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
  423 |       : Base(other.derived())
      |                             ^
data_manipulation.cpp:231:70:   required from here
  231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
      |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   44 |   PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   44 |   PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   44 |   PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   44 |   PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   45 |   PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   45 |   PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   45 |   PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   45 |   PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   46 |   PACKET_DECL_COND_PREFIX(_, Res, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   46 |   PACKET_DECL_COND_PREFIX(_, Res, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   46 |   PACKET_DECL_COND_PREFIX(_, Res, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   46 |   PACKET_DECL_COND_PREFIX(_, Res, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
   42 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   51 |         Vectorizable = unpacket_traits<_LhsPacket>::vectorizable &&
      |                                                     ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   52 |         unpacket_traits<_RhsPacket>::vectorizable &&
      |                                      ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   53 |         int(unpacket_traits<_LhsPacket>::size)==int(unpacket_traits<_RhsPacket>::size),
      |                                          ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   53 |         int(unpacket_traits<_LhsPacket>::size)==int(unpacket_traits<_RhsPacket>::size),
      |                                                                                  ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   54 |         LhsPacketSize = Vectorizable ? unpacket_traits<_LhsPacket>::size : 1,
      |                                                                     ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   55 |         RhsPacketSize = Vectorizable ? unpacket_traits<_RhsPacket>::size : 1,
      |                                                                     ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |         ResPacketSize = Vectorizable ? unpacket_traits<_ResPacket>::size : 1
      |                                                                     ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   59 |   typedef typename conditional<Vectorizable,_LhsPacket,LhsScalar>::type LhsPacket;
      |                                                                         ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   60 |   typedef typename conditional<Vectorizable,_RhsPacket,RhsScalar>::type RhsPacket;
      |                                                                         ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
   61 |   typedef typename conditional<Vectorizable,_ResPacket,ResScalar>::type ResPacket;
      |                                                                         ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, true>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, true>, 1>’
  302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, true>, 3>’
  555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, true> >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, true> >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34:   required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, true>, 0>’
   37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors>
      |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34:   [ skipping 15 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
  954 |     call_dense_assignment_loop(dst, src, func);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
  890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  594 |       _set_noalias(other);
      |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
  423 |       : Base(other.derived())
      |                             ^
data_manipulation.cpp:231:70:   required from here
  231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
      |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >, 1>’
  302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >, 3>’
  555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Transpose<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> > >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Transpose<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> > >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37:   required from ‘class Eigen::TransposeImpl<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, Eigen::Dense>’
  118 | template<typename MatrixType> class TransposeImpl<MatrixType,Dense>
      |                                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37:   [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
  954 |     call_dense_assignment_loop(dst, src, func);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
  890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  594 |       _set_noalias(other);
      |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
  423 |       : Base(other.derived())
      |                             ^
data_manipulation.cpp:231:70:   required from here
  231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
      |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true> >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true> >, 2>’
  481 | class DenseCoeffsBase<Derived, DirectAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true> > >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true> > >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37:   required from ‘class Eigen::TransposeImpl<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, Eigen::Dense>’
  118 | template<typename MatrixType> class TransposeImpl<MatrixType,Dense>
      |                                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37:   required from ‘class Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true> >’
   52 | template<typename MatrixType> class Transpose
      |                                     ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:207:43:   [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
  954 |     call_dense_assignment_loop(dst, src, func);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
  890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  594 |       _set_noalias(other);
      |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
  423 |       : Base(other.derived())
      |                             ^
data_manipulation.cpp:231:70:   required from here
  231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
      |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true> >, const Eigen::Block<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, true> >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true> >, const Eigen::Block<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, true> > >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true> >, const Eigen::Block<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, true> > >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7:   required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true> >, const Eigen::Block<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, true>, Eigen::Dense>’
  148 | class CwiseBinaryOpImpl
      |       ^~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7:   required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true> >, const Eigen::Block<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, true> >’
   77 | class CwiseBinaryOp :
      |       ^~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:50:56:   required from ‘static Eigen::internal::dot_nocheck<T, U, true>::ResScalar Eigen::internal::dot_nocheck<T, U, true>::run(const Eigen::MatrixBase<Derived>&, const Eigen::MatrixBase<U>&) [with T = Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>; U = Eigen::Block<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, true>; ResScalar = double]’
   50 |     return a.transpose().template binaryExpr<conj_prod>(b).sum();
      |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:84:58:   [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
  954 |     call_dense_assignment_loop(dst, src, func);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
  890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  594 |       _set_noalias(other);
      |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
  423 |       : Base(other.derived())
      |                             ^
data_manipulation.cpp:231:70:   required from here
  231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
      |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<const Eigen::Block<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 1, -1, true> >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<const Eigen::Block<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 1, -1, true> >, 2>’
  481 | class DenseCoeffsBase<Derived, DirectAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Transpose<const Eigen::Block<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 1, -1, true> > >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Transpose<const Eigen::Block<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 1, -1, true> > >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37:   required from ‘class Eigen::TransposeImpl<const Eigen::Block<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 1, -1, true>, Eigen::Dense>’
  118 | template<typename MatrixType> class TransposeImpl<MatrixType,Dense>
      |                                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37:   required from ‘class Eigen::Transpose<const Eigen::Block<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 1, -1, true> >’
   52 | template<typename MatrixType> class Transpose
      |                                     ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:50:23:   [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
  954 |     call_dense_assignment_loop(dst, src, func);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
  890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  594 |       _set_noalias(other);
      |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
  423 |       : Base(other.derived())
      |                             ^
data_manipulation.cpp:231:70:   required from here
  231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
      |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 1, -1, true> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 1, -1, true> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> > >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 1, -1, true> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> > >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7:   required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 1, -1, true> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, Eigen::Dense>’
  148 | class CwiseBinaryOpImpl
      |       ^~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7:   required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 1, -1, true> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >’
   77 | class CwiseBinaryOp :
      |       ^~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:50:56:   required from ‘static Eigen::internal::dot_nocheck<T, U, true>::ResScalar Eigen::internal::dot_nocheck<T, U, true>::run(const Eigen::MatrixBase<Derived>&, const Eigen::MatrixBase<U>&) [with T = Eigen::Block<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 1, -1, true>; U = Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>; ResScalar = double]’
   50 |     return a.transpose().template binaryExpr<conj_prod>(b).sum();
      |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:84:58:   [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
  954 |     call_dense_assignment_loop(dst, src, func);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
  890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  594 |       _set_noalias(other);
      |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
  423 |       : Base(other.derived())
      |                             ^
data_manipulation.cpp:231:70:   required from here
  231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
      |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Transpose<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >, -1, 1, true>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Transpose<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >, -1, 1, true>, 1>’
  302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Transpose<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >, -1, 1, true>, 3>’
  555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Transpose<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >, -1, 1, true> >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Transpose<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >, -1, 1, true> >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34:   required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Transpose<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >, -1, 1, true>, 0>’
   37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors>
      |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34:   [ skipping 16 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
  954 |     call_dense_assignment_loop(dst, src, func);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
  890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  594 |       _set_noalias(other);
      |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
  423 |       : Base(other.derived())
      |                             ^
data_manipulation.cpp:231:70:   required from here
  231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
      |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:330:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of ‘class Eigen::internal::gebp_traits<double, double, false, false, 1, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:147:40:   required from ‘void Eigen::internal::evaluateProductBlockingSizesHeuristic(Index&, Index&, Index&, Index) [with LhsScalar = double; RhsScalar = double; int KcFactor = 1; Index = long int]’
  147 |     typedef typename Traits::ResScalar ResScalar;
      |                                        ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:342:81:   required from ‘void Eigen::internal::computeProductBlockingSizes(Index&, Index&, Index&, Index) [with LhsScalar = double; RhsScalar = double; int KcFactor = 1; Index = long int]’
  342 |     evaluateProductBlockingSizesHeuristic<LhsScalar, RhsScalar, KcFactor, Index>(k, m, n, num_threads);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:355:66:   required from ‘Eigen::internal::gemm_blocking_space<StorageOrder, _LhsScalar, _RhsScalar, MaxRows, MaxCols, MaxDepth, KcFactor, false>::gemm_blocking_space(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, bool) [with int StorageOrder = 0; _LhsScalar = double; _RhsScalar = double; int MaxRows = -1; int MaxCols = -1; int MaxDepth = -1; int KcFactor = 1; Eigen::Index = long int]’
  355 |         computeProductBlockingSizes<LhsScalar,RhsScalar,KcFactor>(this->m_kc, this->m_mc, this->m_nc, num_threads);
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:507:18:   required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, -1>; Scalar = double]’
  507 |     BlockingType blocking(dst.rows(), dst.cols(), lhs.cols(), 1, true);
      |                  ^~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:445:20:   required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, -1>]’
  445 |       scaleAndAddTo(dst, lhs, rhs, Scalar(1));
      |       ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:124:75:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
  954 |     call_dense_assignment_loop(dst, src, func);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
  890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  594 |       _set_noalias(other);
      |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
  423 |       : Base(other.derived())
      |                             ^
data_manipulation.cpp:231:70:   required from here
  231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
      |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:425:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  425 |   PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:425:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  425 |   PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:425:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  425 |   PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:425:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  425 |   PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:426:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  426 |   PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:426:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  426 |   PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:426:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  426 |   PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:426:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  426 |   PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:427:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  427 |   PACKET_DECL_COND_PREFIX(_, Res, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:427:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  427 |   PACKET_DECL_COND_PREFIX(_, Res, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:427:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  427 |   PACKET_DECL_COND_PREFIX(_, Res, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:427:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  427 |   PACKET_DECL_COND_PREFIX(_, Res, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:49: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  432 |     Vectorizable = unpacket_traits<_LhsPacket>::vectorizable && unpacket_traits<_RhsPacket>::vectorizable,
      |                                                 ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:49: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:49: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:49: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:94: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  432 |     Vectorizable = unpacket_traits<_LhsPacket>::vectorizable && unpacket_traits<_RhsPacket>::vectorizable,
      |                                                                                              ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:94: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:94: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:94: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:433:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  433 |     LhsPacketSize = Vectorizable ? unpacket_traits<_LhsPacket>::size : 1,
      |                                                                 ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:433:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:433:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:433:65: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:434:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  434 |     RhsPacketSize = Vectorizable ? unpacket_traits<_RhsPacket>::size : 1,
      |                                                                 ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:434:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:434:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:434:65: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:435:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  435 |     ResPacketSize = Vectorizable ? unpacket_traits<_ResPacket>::size : 1,
      |                                                                 ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:435:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:435:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:435:65: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:460:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  460 |   typedef typename conditional<Vectorizable,_LhsPacket,LhsScalar>::type LhsPacket;
      |                                                                         ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:460:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:460:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:460:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:461:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  461 |   typedef typename conditional<Vectorizable,_RhsPacket,RhsScalar>::type RhsPacket;
      |                                                                         ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:461:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:461:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:461:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:462:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  462 |   typedef typename conditional<Vectorizable,_ResPacket,ResScalar>::type ResPacket;
      |                                                                         ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:462:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:462:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:462:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  465 |   typedef QuadPacket<RhsPacket> RhsPacketx4;
      |                                 ^~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of ‘class Eigen::internal::gebp_traits<double, double, false, false, 1, 1>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1080:42:   required from ‘struct Eigen::internal::gebp_kernel<double, double, long int, Eigen::internal::blas_data_mapper<double, long int, 0, 0, 1>, 4, 4, false, false>’
 1080 |   typedef typename HalfTraits::LhsPacket LhsPacketHalf;
      |                                          ^~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:82:107:   required from ‘static void Eigen::internal::general_matrix_matrix_product<Index, LhsScalar, LhsStorageOrder, ConjugateLhs, RhsScalar, RhsStorageOrder, ConjugateRhs, 0, ResInnerStride>::run(Index, Index, Index, const LhsScalar*, Index, const RhsScalar*, Index, ResScalar*, Index, Index, ResScalar, Eigen::internal::level3_blocking<LhsScalar, RhsScalar>&, Eigen::internal::GemmParallelInfo<Index>*) [with Index = long int; LhsScalar = double; int LhsStorageOrder = 1; bool ConjugateLhs = false; RhsScalar = double; int RhsStorageOrder = 0; bool ConjugateRhs = false; int ResInnerStride = 1; ResScalar = double]’
   82 |   gebp_kernel<LhsScalar, RhsScalar, Index, ResMapper, Traits::mr, Traits::nr, ConjugateLhs, ConjugateRhs> gebp;
      |                                                                                                           ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:230:14:   required from ‘void Eigen::internal::gemm_functor<Scalar, Index, Gemm, Lhs, Rhs, Dest, BlockingType>::operator()(Index, Index, Index, Index, Eigen::internal::GemmParallelInfo<Index>*) const [with Scalar = double; Index = long int; Gemm = Eigen::internal::general_matrix_matrix_product<long int, double, 1, false, double, 0, false, 0, 1>; Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, -1>; Dest = Eigen::Matrix<double, -1, -1>; BlockingType = Eigen::internal::gemm_blocking_space<0, double, double, -1, -1, -1, 1, false>]’
  230 |     Gemm::run(rows, cols, m_lhs.cols(),
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
  231 |               &m_lhs.coeffRef(row,0), m_lhs.outerStride(),
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  232 |               &m_rhs.coeffRef(0,col), m_rhs.outerStride(),
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  233 |               (Scalar*)&(m_dest.coeffRef(row,col)), m_dest.innerStride(), m_dest.outerStride(),
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  234 |               m_actualAlpha, m_blocking, info);
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/Parallelizer.h:114:7:   required from ‘void Eigen::internal::parallelize_gemm(const Functor&, Index, Index, Index, bool) [with bool Condition = true; Functor = gemm_functor<double, long int, general_matrix_matrix_product<long int, double, 1, false, double, 0, false, 0, 1>, Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, Eigen::Matrix<double, -1, -1>, gemm_blocking_space<0, double, double, -1, -1, -1, 1, false> >; Index = long int]’
  114 |   func(0,rows, 0,cols);
      |   ~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:509:9:   required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, -1>; Scalar = double]’
  508 |     internal::parallelize_gemm<(Dest::MaxRowsAtCompileTime>32 || Dest::MaxRowsAtCompileTime==Dynamic)>
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  509 |         (GemmFunctor(lhs, rhs, dst, actualAlpha, blocking), a_lhs.rows(), a_rhs.cols(), a_lhs.cols(), Dest::Flags&RowMajorBit);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:445:20:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
  954 |     call_dense_assignment_loop(dst, src, func);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
  890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  594 |       _set_noalias(other);
      |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
  423 |       : Base(other.derived())
      |                             ^
data_manipulation.cpp:231:70:   required from here
  231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
      |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:425:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  425 |   PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:425:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  425 |   PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:425:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  425 |   PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:425:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  425 |   PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:426:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  426 |   PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:426:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  426 |   PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:426:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  426 |   PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:426:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  426 |   PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:427:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  427 |   PACKET_DECL_COND_PREFIX(_, Res, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:427:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  427 |   PACKET_DECL_COND_PREFIX(_, Res, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:427:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  427 |   PACKET_DECL_COND_PREFIX(_, Res, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:427:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  427 |   PACKET_DECL_COND_PREFIX(_, Res, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:49: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  432 |     Vectorizable = unpacket_traits<_LhsPacket>::vectorizable && unpacket_traits<_RhsPacket>::vectorizable,
      |                                                 ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:49: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:49: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:49: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:94: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  432 |     Vectorizable = unpacket_traits<_LhsPacket>::vectorizable && unpacket_traits<_RhsPacket>::vectorizable,
      |                                                                                              ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:94: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:94: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:94: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:433:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  433 |     LhsPacketSize = Vectorizable ? unpacket_traits<_LhsPacket>::size : 1,
      |                                                                 ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:433:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:433:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:433:65: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:434:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  434 |     RhsPacketSize = Vectorizable ? unpacket_traits<_RhsPacket>::size : 1,
      |                                                                 ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:434:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:434:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:434:65: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:435:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  435 |     ResPacketSize = Vectorizable ? unpacket_traits<_ResPacket>::size : 1,
      |                                                                 ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:435:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:435:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:435:65: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:460:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  460 |   typedef typename conditional<Vectorizable,_LhsPacket,LhsScalar>::type LhsPacket;
      |                                                                         ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:460:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:460:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:460:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:461:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  461 |   typedef typename conditional<Vectorizable,_RhsPacket,RhsScalar>::type RhsPacket;
      |                                                                         ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:461:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:461:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:461:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:462:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  462 |   typedef typename conditional<Vectorizable,_ResPacket,ResScalar>::type ResPacket;
      |                                                                         ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:462:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:462:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:462:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  465 |   typedef QuadPacket<RhsPacket> RhsPacketx4;
      |                                 ^~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of ‘class Eigen::internal::gebp_traits<double, double, false, false, 1, 2>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1085:45:   required from ‘struct Eigen::internal::gebp_kernel<double, double, long int, Eigen::internal::blas_data_mapper<double, long int, 0, 0, 1>, 4, 4, false, false>’
 1085 |   typedef typename QuarterTraits::LhsPacket LhsPacketQuarter;
      |                                             ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:82:107:   required from ‘static void Eigen::internal::general_matrix_matrix_product<Index, LhsScalar, LhsStorageOrder, ConjugateLhs, RhsScalar, RhsStorageOrder, ConjugateRhs, 0, ResInnerStride>::run(Index, Index, Index, const LhsScalar*, Index, const RhsScalar*, Index, ResScalar*, Index, Index, ResScalar, Eigen::internal::level3_blocking<LhsScalar, RhsScalar>&, Eigen::internal::GemmParallelInfo<Index>*) [with Index = long int; LhsScalar = double; int LhsStorageOrder = 1; bool ConjugateLhs = false; RhsScalar = double; int RhsStorageOrder = 0; bool ConjugateRhs = false; int ResInnerStride = 1; ResScalar = double]’
   82 |   gebp_kernel<LhsScalar, RhsScalar, Index, ResMapper, Traits::mr, Traits::nr, ConjugateLhs, ConjugateRhs> gebp;
      |                                                                                                           ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:230:14:   required from ‘void Eigen::internal::gemm_functor<Scalar, Index, Gemm, Lhs, Rhs, Dest, BlockingType>::operator()(Index, Index, Index, Index, Eigen::internal::GemmParallelInfo<Index>*) const [with Scalar = double; Index = long int; Gemm = Eigen::internal::general_matrix_matrix_product<long int, double, 1, false, double, 0, false, 0, 1>; Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, -1>; Dest = Eigen::Matrix<double, -1, -1>; BlockingType = Eigen::internal::gemm_blocking_space<0, double, double, -1, -1, -1, 1, false>]’
  230 |     Gemm::run(rows, cols, m_lhs.cols(),
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
  231 |               &m_lhs.coeffRef(row,0), m_lhs.outerStride(),
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  232 |               &m_rhs.coeffRef(0,col), m_rhs.outerStride(),
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  233 |               (Scalar*)&(m_dest.coeffRef(row,col)), m_dest.innerStride(), m_dest.outerStride(),
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  234 |               m_actualAlpha, m_blocking, info);
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/Parallelizer.h:114:7:   required from ‘void Eigen::internal::parallelize_gemm(const Functor&, Index, Index, Index, bool) [with bool Condition = true; Functor = gemm_functor<double, long int, general_matrix_matrix_product<long int, double, 1, false, double, 0, false, 0, 1>, Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, Eigen::Matrix<double, -1, -1>, gemm_blocking_space<0, double, double, -1, -1, -1, 1, false> >; Index = long int]’
  114 |   func(0,rows, 0,cols);
      |   ~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:509:9:   required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, -1>; Scalar = double]’
  508 |     internal::parallelize_gemm<(Dest::MaxRowsAtCompileTime>32 || Dest::MaxRowsAtCompileTime==Dynamic)>
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  509 |         (GemmFunctor(lhs, rhs, dst, actualAlpha, blocking), a_lhs.rows(), a_rhs.cols(), a_lhs.cols(), Dest::Flags&RowMajorBit);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:445:20:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
  954 |     call_dense_assignment_loop(dst, src, func);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
  890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  594 |       _set_noalias(other);
      |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
  423 |       : Base(other.derived())
      |                             ^
data_manipulation.cpp:231:70:   required from here
  231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
      |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:425:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  425 |   PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:425:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  425 |   PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:425:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  425 |   PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:425:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  425 |   PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:426:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  426 |   PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:426:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  426 |   PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:426:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  426 |   PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:426:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  426 |   PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:427:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  427 |   PACKET_DECL_COND_PREFIX(_, Res, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:427:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  427 |   PACKET_DECL_COND_PREFIX(_, Res, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:427:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  427 |   PACKET_DECL_COND_PREFIX(_, Res, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:427:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  427 |   PACKET_DECL_COND_PREFIX(_, Res, _PacketSize);
      |                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’
  384 |   prefix ## name ## Packet
      |   ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:49: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  432 |     Vectorizable = unpacket_traits<_LhsPacket>::vectorizable && unpacket_traits<_RhsPacket>::vectorizable,
      |                                                 ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:49: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:49: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:49: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:94: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  432 |     Vectorizable = unpacket_traits<_LhsPacket>::vectorizable && unpacket_traits<_RhsPacket>::vectorizable,
      |                                                                                              ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:94: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:94: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:94: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:433:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  433 |     LhsPacketSize = Vectorizable ? unpacket_traits<_LhsPacket>::size : 1,
      |                                                                 ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:433:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:433:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:433:65: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:434:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  434 |     RhsPacketSize = Vectorizable ? unpacket_traits<_RhsPacket>::size : 1,
      |                                                                 ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:434:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:434:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:434:65: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:435:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  435 |     ResPacketSize = Vectorizable ? unpacket_traits<_ResPacket>::size : 1,
      |                                                                 ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:435:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:435:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:435:65: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:460:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  460 |   typedef typename conditional<Vectorizable,_LhsPacket,LhsScalar>::type LhsPacket;
      |                                                                         ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:460:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:460:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:460:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:461:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  461 |   typedef typename conditional<Vectorizable,_RhsPacket,RhsScalar>::type RhsPacket;
      |                                                                         ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:461:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:461:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:461:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:462:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  462 |   typedef typename conditional<Vectorizable,_ResPacket,ResScalar>::type ResPacket;
      |                                                                         ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:462:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:462:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:462:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
  465 |   typedef QuadPacket<RhsPacket> RhsPacketx4;
      |                                 ^~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of ‘void Eigen::internal::gemm_pack_lhs<Scalar, Index, DataMapper, Pack1, Pack2, Packet, 1, Conjugate, PanelMode>::operator()(Scalar*, const DataMapper&, Index, Index, Index, Index) [with Scalar = double; Index = long int; DataMapper = Eigen::internal::const_blas_data_mapper<double, long int, 1>; int Pack1 = 4; int Pack2 = 2; Packet = __vector(2) double; bool Conjugate = false; bool PanelMode = false]’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:184:17:   required from ‘static void Eigen::internal::general_matrix_matrix_product<Index, LhsScalar, LhsStorageOrder, ConjugateLhs, RhsScalar, RhsStorageOrder, ConjugateRhs, 0, ResInnerStride>::run(Index, Index, Index, const LhsScalar*, Index, const RhsScalar*, Index, ResScalar*, Index, Index, ResScalar, Eigen::internal::level3_blocking<LhsScalar, RhsScalar>&, Eigen::internal::GemmParallelInfo<Index>*) [with Index = long int; LhsScalar = double; int LhsStorageOrder = 1; bool ConjugateLhs = false; RhsScalar = double; int RhsStorageOrder = 0; bool ConjugateRhs = false; int ResInnerStride = 1; ResScalar = double]’
  184 |         pack_lhs(blockA, lhs.getSubMapper(i2,k2), actual_kc, actual_mc);
      |         ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:230:14:   required from ‘void Eigen::internal::gemm_functor<Scalar, Index, Gemm, Lhs, Rhs, Dest, BlockingType>::operator()(Index, Index, Index, Index, Eigen::internal::GemmParallelInfo<Index>*) const [with Scalar = double; Index = long int; Gemm = Eigen::internal::general_matrix_matrix_product<long int, double, 1, false, double, 0, false, 0, 1>; Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, -1>; Dest = Eigen::Matrix<double, -1, -1>; BlockingType = Eigen::internal::gemm_blocking_space<0, double, double, -1, -1, -1, 1, false>]’
  230 |     Gemm::run(rows, cols, m_lhs.cols(),
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
  231 |               &m_lhs.coeffRef(row,0), m_lhs.outerStride(),
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  232 |               &m_rhs.coeffRef(0,col), m_rhs.outerStride(),
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  233 |               (Scalar*)&(m_dest.coeffRef(row,col)), m_dest.innerStride(), m_dest.outerStride(),
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  234 |               m_actualAlpha, m_blocking, info);
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/Parallelizer.h:114:7:   required from ‘void Eigen::internal::parallelize_gemm(const Functor&, Index, Index, Index, bool) [with bool Condition = true; Functor = gemm_functor<double, long int, general_matrix_matrix_product<long int, double, 1, false, double, 0, false, 0, 1>, Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, Eigen::Matrix<double, -1, -1>, gemm_blocking_space<0, double, double, -1, -1, -1, 1, false> >; Index = long int]’
  114 |   func(0,rows, 0,cols);
      |   ~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:509:9:   required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, -1>; Scalar = double]’
  508 |     internal::parallelize_gemm<(Dest::MaxRowsAtCompileTime>32 || Dest::MaxRowsAtCompileTime==Dynamic)>
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  509 |         (GemmFunctor(lhs, rhs, dst, actualAlpha, blocking), a_lhs.rows(), a_rhs.cols(), a_lhs.cols(), Dest::Flags&RowMajorBit);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:445:20:   required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, -1>]’
  445 |       scaleAndAddTo(dst, lhs, rhs, Scalar(1));
      |       ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:124:75:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
  954 |     call_dense_assignment_loop(dst, src, func);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
  890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  594 |       _set_noalias(other);
      |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
  423 |       : Base(other.derived())
      |                             ^
data_manipulation.cpp:231:70:   required from here
  231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
      |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2256:82: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
 2256 |   typedef typename unpacket_traits<typename unpacket_traits<Packet>::half>::half QuarterPacket;
      |                                                                                  ^~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2258:56: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
 2258 |          HalfPacketSize = unpacket_traits<HalfPacket>::size,
      |                                                        ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2259:62: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
 2259 |          QuarterPacketSize = unpacket_traits<QuarterPacket>::size,
      |                                                              ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2259:62: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2298:39: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
 2298 |               PacketBlock<HalfPacket> kernel_half;
      |                                       ^~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2298:39: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2304:42: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
 2304 |               PacketBlock<QuarterPacket> kernel_quarter;
      |                                          ^~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2304:42: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2304:42: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2304:42: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of ‘void Eigen::internal::gemm_pack_rhs<Scalar, Index, DataMapper, nr, 0, Conjugate, PanelMode>::operator()(Scalar*, const DataMapper&, Index, Index, Index, Index) [with Scalar = double; Index = long int; DataMapper = Eigen::internal::const_blas_data_mapper<double, long int, 0>; int nr = 4; bool Conjugate = false; bool PanelMode = false]’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:195:21:   required from ‘static void Eigen::internal::general_matrix_matrix_product<Index, LhsScalar, LhsStorageOrder, ConjugateLhs, RhsScalar, RhsStorageOrder, ConjugateRhs, 0, ResInnerStride>::run(Index, Index, Index, const LhsScalar*, Index, const RhsScalar*, Index, ResScalar*, Index, Index, ResScalar, Eigen::internal::level3_blocking<LhsScalar, RhsScalar>&, Eigen::internal::GemmParallelInfo<Index>*) [with Index = long int; LhsScalar = double; int LhsStorageOrder = 1; bool ConjugateLhs = false; RhsScalar = double; int RhsStorageOrder = 0; bool ConjugateRhs = false; int ResInnerStride = 1; ResScalar = double]’
  195 |             pack_rhs(blockB, rhs.getSubMapper(k2,j2), actual_kc, actual_nc);
      |             ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:230:14:   required from ‘void Eigen::internal::gemm_functor<Scalar, Index, Gemm, Lhs, Rhs, Dest, BlockingType>::operator()(Index, Index, Index, Index, Eigen::internal::GemmParallelInfo<Index>*) const [with Scalar = double; Index = long int; Gemm = Eigen::internal::general_matrix_matrix_product<long int, double, 1, false, double, 0, false, 0, 1>; Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, -1>; Dest = Eigen::Matrix<double, -1, -1>; BlockingType = Eigen::internal::gemm_blocking_space<0, double, double, -1, -1, -1, 1, false>]’
  230 |     Gemm::run(rows, cols, m_lhs.cols(),
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
  231 |               &m_lhs.coeffRef(row,0), m_lhs.outerStride(),
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  232 |               &m_rhs.coeffRef(0,col), m_rhs.outerStride(),
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  233 |               (Scalar*)&(m_dest.coeffRef(row,col)), m_dest.innerStride(), m_dest.outerStride(),
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  234 |               m_actualAlpha, m_blocking, info);
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/Parallelizer.h:114:7:   required from ‘void Eigen::internal::parallelize_gemm(const Functor&, Index, Index, Index, bool) [with bool Condition = true; Functor = gemm_functor<double, long int, general_matrix_matrix_product<long int, double, 1, false, double, 0, false, 0, 1>, Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, Eigen::Matrix<double, -1, -1>, gemm_blocking_space<0, double, double, -1, -1, -1, 1, false> >; Index = long int]’
  114 |   func(0,rows, 0,cols);
      |   ~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:509:9:   required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, -1>; Scalar = double]’
  508 |     internal::parallelize_gemm<(Dest::MaxRowsAtCompileTime>32 || Dest::MaxRowsAtCompileTime==Dynamic)>
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  509 |         (GemmFunctor(lhs, rhs, dst, actualAlpha, blocking), a_lhs.rows(), a_rhs.cols(), a_lhs.cols(), Dest::Flags&RowMajorBit);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:445:20:   required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, -1>]’
  445 |       scaleAndAddTo(dst, lhs, rhs, Scalar(1));
      |       ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:124:75:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
  954 |     call_dense_assignment_loop(dst, src, func);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
  890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  594 |       _set_noalias(other);
      |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
  423 |       : Base(other.derived())
      |                             ^
data_manipulation.cpp:231:70:   required from here
  231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
      |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2459:62: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
 2459 |           PacketBlock<Packet,(PacketSize%4)==0?4:PacketSize> kernel;
      |                                                              ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of ‘void Eigen::internal::gebp_kernel<LhsScalar, RhsScalar, Index, DataMapper, mr, nr, ConjugateLhs, ConjugateRhs>::operator()(const DataMapper&, const LhsScalar*, const RhsScalar*, Index, Index, Index, ResScalar, Index, Index, Index, Index) [with LhsScalar = double; RhsScalar = double; Index = long int; DataMapper = Eigen::internal::blas_data_mapper<double, long int, 0, 0, 1>; int mr = 4; int nr = 4; bool ConjugateLhs = false; bool ConjugateRhs = false; ResScalar = double]’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:198:15:   required from ‘static void Eigen::internal::general_matrix_matrix_product<Index, LhsScalar, LhsStorageOrder, ConjugateLhs, RhsScalar, RhsStorageOrder, ConjugateRhs, 0, ResInnerStride>::run(Index, Index, Index, const LhsScalar*, Index, const RhsScalar*, Index, ResScalar*, Index, Index, ResScalar, Eigen::internal::level3_blocking<LhsScalar, RhsScalar>&, Eigen::internal::GemmParallelInfo<Index>*) [with Index = long int; LhsScalar = double; int LhsStorageOrder = 1; bool ConjugateLhs = false; RhsScalar = double; int RhsStorageOrder = 0; bool ConjugateRhs = false; int ResInnerStride = 1; ResScalar = double]’
  198 |           gebp(res.getSubMapper(i2, j2), blockA, blockB, actual_mc, actual_kc, actual_nc, alpha);
      |           ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:230:14:   required from ‘void Eigen::internal::gemm_functor<Scalar, Index, Gemm, Lhs, Rhs, Dest, BlockingType>::operator()(Index, Index, Index, Index, Eigen::internal::GemmParallelInfo<Index>*) const [with Scalar = double; Index = long int; Gemm = Eigen::internal::general_matrix_matrix_product<long int, double, 1, false, double, 0, false, 0, 1>; Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, -1>; Dest = Eigen::Matrix<double, -1, -1>; BlockingType = Eigen::internal::gemm_blocking_space<0, double, double, -1, -1, -1, 1, false>]’
  230 |     Gemm::run(rows, cols, m_lhs.cols(),
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
  231 |               &m_lhs.coeffRef(row,0), m_lhs.outerStride(),
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  232 |               &m_rhs.coeffRef(0,col), m_rhs.outerStride(),
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  233 |               (Scalar*)&(m_dest.coeffRef(row,col)), m_dest.innerStride(), m_dest.outerStride(),
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  234 |               m_actualAlpha, m_blocking, info);
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/Parallelizer.h:114:7:   required from ‘void Eigen::internal::parallelize_gemm(const Functor&, Index, Index, Index, bool) [with bool Condition = true; Functor = gemm_functor<double, long int, general_matrix_matrix_product<long int, double, 1, false, double, 0, false, 0, 1>, Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, Eigen::Matrix<double, -1, -1>, gemm_blocking_space<0, double, double, -1, -1, -1, 1, false> >; Index = long int]’
  114 |   func(0,rows, 0,cols);
      |   ~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:509:9:   required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, -1>; Scalar = double]’
  508 |     internal::parallelize_gemm<(Dest::MaxRowsAtCompileTime>32 || Dest::MaxRowsAtCompileTime==Dynamic)>
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  509 |         (GemmFunctor(lhs, rhs, dst, actualAlpha, blocking), a_lhs.rows(), a_rhs.cols(), a_lhs.cols(), Dest::Flags&RowMajorBit);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:445:20:   required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, -1>]’
  445 |       scaleAndAddTo(dst, lhs, rhs, Scalar(1));
      |       ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:124:75:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
  954 |     call_dense_assignment_loop(dst, src, func);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
  890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  594 |       _set_noalias(other);
      |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
  423 |       : Base(other.derived())
      |                             ^
data_manipulation.cpp:231:70:   required from here
  231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
      |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1920:103: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
 1920 |           const int SResPacketHalfSize = unpacket_traits<typename unpacket_traits<SResPacket>::half>::size;
      |                                                                                                       ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1921:138: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
 1921 |           const int SResPacketQuarterSize = unpacket_traits<typename unpacket_traits<typename unpacket_traits<SResPacket>::half>::half>::size;
      |                                                                                                                                          ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1921:138: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1977:135: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
 1977 |               typedef typename conditional<SwappedTraits::LhsProgress>=8,typename unpacket_traits<SResPacket>::half,SResPacket>::type SResPacketHalf;
      |                                                                                                                                       ^~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1978:135: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
 1978 |               typedef typename conditional<SwappedTraits::LhsProgress>=8,typename unpacket_traits<SLhsPacket>::half,SLhsPacket>::type SLhsPacketHalf;
      |                                                                                                                                       ^~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1979:135: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
 1979 |               typedef typename conditional<SwappedTraits::LhsProgress>=8,typename unpacket_traits<SRhsPacket>::half,SRhsPacket>::type SRhsPacketHalf;
      |                                                                                                                                       ^~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1980:135: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
 1980 |               typedef typename conditional<SwappedTraits::LhsProgress>=8,typename unpacket_traits<SAccPacket>::half,SAccPacket>::type SAccPacketHalf;
      |                                                                                                                                       ^~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, true> >’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8:   required from ‘struct Eigen::internal::evaluator<const Eigen::Block<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, true> >’
  100 | struct evaluator<const T>
      |        ^~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:78:   required from ‘struct Eigen::internal::binary_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true> >, const Eigen::Block<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, true> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’
  739 |     CoeffReadCost = int(evaluator<Lhs>::CoeffReadCost) + int(evaluator<Rhs>::CoeffReadCost) + int(functor_traits<BinaryOp>::Cost),
      |                                                                              ^~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8:   required from ‘struct Eigen::internal::evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true> >, const Eigen::Block<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, true> > >’
  722 | struct evaluator<CwiseBinaryOp<BinaryOp, Lhs, Rhs> >
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:357:7:   required from ‘class Eigen::internal::redux_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true> >, const Eigen::Block<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, true> > >’
  357 | class redux_evaluator : public internal::evaluator<_XprType>
      |       ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:414:17:   required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true> >, const Eigen::Block<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, true> >; typename Eigen::internal::traits<T>::Scalar = double]’
  414 |   ThisEvaluator thisEval(derived());
      |                 ^~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:463:25:   [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
  954 |     call_dense_assignment_loop(dst, src, func);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
  890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  594 |       _set_noalias(other);
      |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
  423 |       : Base(other.derived())
      |                             ^
data_manipulation.cpp:231:70:   required from here
  231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
      |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
 1071 |     PacketAlignment = unpacket_traits<PacketScalar>::alignment,
      |                                                      ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 1, -1, true> >’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8:   required from ‘struct Eigen::internal::evaluator<const Eigen::Block<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 1, -1, true> >’
  100 | struct evaluator<const T>
      |        ^~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:311:41:   required from ‘struct Eigen::internal::unary_evaluator<Eigen::Transpose<const Eigen::Block<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 1, -1, true> >, Eigen::internal::IndexBased, double>’
  311 |     CoeffReadCost = evaluator<ArgType>::CoeffReadCost,
      |                                         ^~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8:   required from ‘struct Eigen::internal::evaluator<Eigen::Transpose<const Eigen::Block<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 1, -1, true> > >’
   90 | struct evaluator : public unary_evaluator<T>
      |        ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8:   required from ‘struct Eigen::internal::evaluator<const Eigen::Transpose<const Eigen::Block<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 1, -1, true> > >’
  100 | struct evaluator<const T>
      |        ^~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:41:   required from ‘struct Eigen::internal::binary_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 1, -1, true> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’
  739 |     CoeffReadCost = int(evaluator<Lhs>::CoeffReadCost) + int(evaluator<Rhs>::CoeffReadCost) + int(functor_traits<BinaryOp>::Cost),
      |                                         ^~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8:   [ skipping 16 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
  954 |     call_dense_assignment_loop(dst, src, func);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
  890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  594 |       _set_noalias(other);
      |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
  423 |       : Base(other.derived())
      |                             ^
data_manipulation.cpp:231:70:   required from here
  231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
      |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
 1071 |     PacketAlignment = unpacket_traits<PacketScalar>::alignment,
      |                                                      ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> > >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> > >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7:   required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, Eigen::Dense>’
  148 | class CwiseBinaryOpImpl
      |       ^~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7:   required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >’
   77 | class CwiseBinaryOp :
      |       ^~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:606:52:   required from ‘const Eigen::internal::product_evaluator<Eigen::Product<Lhs, Rhs, 1>, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::CoeffReturnType Eigen::internal::product_evaluator<Eigen::Product<Lhs, Rhs, 1>, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::coeff(Eigen::Index, Eigen::Index) const [with Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, -1>; int ProductTag = 8; typename Eigen::internal::traits<typename Eigen::Product<Lhs, Rhs, 1>::Lhs>::Scalar = double; typename Eigen::Product<Lhs, Rhs, 1>::Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; typename Eigen::internal::traits<typename Eigen::Product<Lhs, Rhs, 1>::Rhs>::Scalar = double; typename Eigen::Product<Lhs, Rhs, 1>::Rhs = Eigen::Matrix<double, -1, -1>; CoeffReturnType = double; Eigen::Index = long int]’
  606 |     return (m_lhs.row(row).transpose().cwiseProduct( m_rhs.col(col) )).sum();
      |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:654:63:   [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
  954 |     call_dense_assignment_loop(dst, src, func);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
  890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  594 |       _set_noalias(other);
      |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
  423 |       : Base(other.derived())
      |                             ^
data_manipulation.cpp:231:70:   required from here
  231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
      |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase<Derived>&) [with Derived = Eigen::CwiseBinaryOp<scalar_conj_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true> >, const Eigen::Block<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, true> >; Eigen::Index = long int]’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:243:63:   required from ‘static Eigen::internal::redux_impl<Func, Evaluator, 3, 0>::Scalar Eigen::internal::redux_impl<Func, Evaluator, 3, 0>::run(const Evaluator&, const Func&, const XprType&) [with XprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true> >, const Eigen::Block<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, true> >; Func = Eigen::internal::scalar_sum_op<double, double>; Evaluator = Eigen::internal::redux_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true> >, const Eigen::Block<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, true> > >; Scalar = double]’
  243 |     const Index alignedStart = internal::first_default_aligned(xpr);
      |                                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56:   required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true> >, const Eigen::Block<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, true> >; typename Eigen::internal::traits<T>::Scalar = double]’
  418 |   return internal::redux_impl<Func, ThisEvaluator>::run(thisEval, func, derived());
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:463:25:   required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::sum() const [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true> >, const Eigen::Block<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, true> >; typename Eigen::internal::traits<T>::Scalar = double]’
  463 |   return derived().redux(Eigen::internal::scalar_sum_op<Scalar,Scalar>());
      |          ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:50:63:   required from ‘static Eigen::internal::dot_nocheck<T, U, true>::ResScalar Eigen::internal::dot_nocheck<T, U, true>::run(const Eigen::MatrixBase<Derived>&, const Eigen::MatrixBase<U>&) [with T = Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>; U = Eigen::Block<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, true>; ResScalar = double]’
   50 |     return a.transpose().template binaryExpr<conj_prod>(b).sum();
      |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:84:58:   required from ‘typename Eigen::ScalarBinaryOpTraits<typename Eigen::internal::traits<T>::Scalar, typename Eigen::internal::traits<OtherDerived>::Scalar>::ReturnType Eigen::MatrixBase<Derived>::dot(const Eigen::MatrixBase<OtherDerived>&) const [with OtherDerived = Eigen::Block<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, true>; Derived = Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>; typename Eigen::ScalarBinaryOpTraits<typename Eigen::internal::traits<T>::Scalar, typename Eigen::internal::traits<OtherDerived>::Scalar>::ReturnType = double; typename Eigen::internal::traits<T>::Scalar = double; typename Eigen::internal::traits<OtherDerived>::Scalar = double]’
   84 |   return internal::dot_nocheck<Derived,OtherDerived>::run(*this, other);
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:380:62:   [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
  954 |     call_dense_assignment_loop(dst, src, func);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
  890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  594 |       _set_noalias(other);
      |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
  423 |       : Base(other.derived())
      |                             ^
data_manipulation.cpp:231:70:   required from here
  231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
      |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  654 |   return internal::first_aligned<int(unpacket_traits<DefaultPacketType>::alignment),Derived>(m);
      |                                                                          ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase<Derived>&) [with Derived = Eigen::CwiseBinaryOp<scalar_conj_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 1, -1, true> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >; Eigen::Index = long int]’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:243:63:   required from ‘static Eigen::internal::redux_impl<Func, Evaluator, 3, 0>::Scalar Eigen::internal::redux_impl<Func, Evaluator, 3, 0>::run(const Evaluator&, const Func&, const XprType&) [with XprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 1, -1, true> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >; Func = Eigen::internal::scalar_sum_op<double, double>; Evaluator = Eigen::internal::redux_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 1, -1, true> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> > >; Scalar = double]’
  243 |     const Index alignedStart = internal::first_default_aligned(xpr);
      |                                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56:   required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 1, -1, true> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >; typename Eigen::internal::traits<T>::Scalar = double]’
  418 |   return internal::redux_impl<Func, ThisEvaluator>::run(thisEval, func, derived());
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:463:25:   required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::sum() const [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 1, -1, true> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >; typename Eigen::internal::traits<T>::Scalar = double]’
  463 |   return derived().redux(Eigen::internal::scalar_sum_op<Scalar,Scalar>());
      |          ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:50:63:   required from ‘static Eigen::internal::dot_nocheck<T, U, true>::ResScalar Eigen::internal::dot_nocheck<T, U, true>::run(const Eigen::MatrixBase<Derived>&, const Eigen::MatrixBase<U>&) [with T = Eigen::Block<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 1, -1, true>; U = Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>; ResScalar = double]’
   50 |     return a.transpose().template binaryExpr<conj_prod>(b).sum();
      |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:84:58:   required from ‘typename Eigen::ScalarBinaryOpTraits<typename Eigen::internal::traits<T>::Scalar, typename Eigen::internal::traits<OtherDerived>::Scalar>::ReturnType Eigen::MatrixBase<Derived>::dot(const Eigen::MatrixBase<OtherDerived>&) const [with OtherDerived = Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>; Derived = Eigen::Block<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true>, 1, -1, true>; typename Eigen::ScalarBinaryOpTraits<typename Eigen::internal::traits<T>::Scalar, typename Eigen::internal::traits<OtherDerived>::Scalar>::ReturnType = double; typename Eigen::internal::traits<T>::Scalar = double; typename Eigen::internal::traits<OtherDerived>::Scalar = double]’
   84 |   return internal::dot_nocheck<Derived,OtherDerived>::run(*this, other);
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:380:62:   [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
  954 |     call_dense_assignment_loop(dst, src, func);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
  890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  594 |       _set_noalias(other);
      |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
  423 |       : Base(other.derived())
      |                             ^
data_manipulation.cpp:231:70:   required from here
  231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
      |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  654 |   return internal::first_aligned<int(unpacket_traits<DefaultPacketType>::alignment),Derived>(m);
      |                                                                          ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase<Derived>&) [with Derived = Eigen::CwiseBinaryOp<scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >; Eigen::Index = long int]’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:243:63:   required from ‘static Eigen::internal::redux_impl<Func, Evaluator, 3, 0>::Scalar Eigen::internal::redux_impl<Func, Evaluator, 3, 0>::run(const Evaluator&, const Func&, const XprType&) [with XprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >; Func = Eigen::internal::scalar_sum_op<double, double>; Evaluator = Eigen::internal::redux_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> > >; Scalar = double]’
  243 |     const Index alignedStart = internal::first_default_aligned(xpr);
      |                                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56:   required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >; typename Eigen::internal::traits<T>::Scalar = double]’
  418 |   return internal::redux_impl<Func, ThisEvaluator>::run(thisEval, func, derived());
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:463:25:   required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::sum() const [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 1, -1, true> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >; typename Eigen::internal::traits<T>::Scalar = double]’
  463 |   return derived().redux(Eigen::internal::scalar_sum_op<Scalar,Scalar>());
      |          ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:606:75:   required from ‘const Eigen::internal::product_evaluator<Eigen::Product<Lhs, Rhs, 1>, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::CoeffReturnType Eigen::internal::product_evaluator<Eigen::Product<Lhs, Rhs, 1>, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::coeff(Eigen::Index, Eigen::Index) const [with Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, -1>; int ProductTag = 8; typename Eigen::internal::traits<typename Eigen::Product<Lhs, Rhs, 1>::Lhs>::Scalar = double; typename Eigen::Product<Lhs, Rhs, 1>::Lhs = Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; typename Eigen::internal::traits<typename Eigen::Product<Lhs, Rhs, 1>::Rhs>::Scalar = double; typename Eigen::Product<Lhs, Rhs, 1>::Rhs = Eigen::Matrix<double, -1, -1>; CoeffReturnType = double; Eigen::Index = long int]’
  606 |     return (m_lhs.row(row).transpose().cwiseProduct( m_rhs.col(col) )).sum();
      |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:654:63:   required from ‘void Eigen::internal::generic_dense_assignment_kernel<DstEvaluatorTypeT, SrcEvaluatorTypeT, Functor, Version>::assignCoeff(Eigen::Index, Eigen::Index) [with DstEvaluatorTypeT = Eigen::internal::evaluator<Eigen::Matrix<double, -1, -1> >; SrcEvaluatorTypeT = Eigen::internal::evaluator<Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 1> >; Functor = Eigen::internal::assign_op<double, double>; int Version = 1; Eigen::Index = long int]’
  654 |     m_functor.assignCoeff(m_dst.coeffRef(row,col), m_src.coeff(row,col));
      |                                                    ~~~~~~~~~~~^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:668:16:   [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
  954 |     call_dense_assignment_loop(dst, src, func);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]’
  890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  594 |       _set_noalias(other);
      |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Product<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
  423 |       : Base(other.derived())
      |                             ^
data_manipulation.cpp:231:70:   required from here
  231 |   Eigen::MatrixXd cov = (mat.adjoint() * mat) / double(mat.rows() - 1);
      |                                                                      ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  654 |   return internal::first_aligned<int(unpacket_traits<DefaultPacketType>::alignment),Derived>(m);
      |                                                                          ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase<Derived>&) [with Derived = Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>; Eigen::Index = long int]’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:243:63:   required from ‘static Eigen::internal::redux_impl<Func, Evaluator, 3, 0>::Scalar Eigen::internal::redux_impl<Func, Evaluator, 3, 0>::run(const Evaluator&, const Func&, const XprType&) [with XprType = Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>; Func = Eigen::internal::scalar_sum_op<double, double>; Evaluator = Eigen::internal::redux_evaluator<Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >; Scalar = double]’
  243 |     const Index alignedStart = internal::first_default_aligned(xpr);
      |                                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56:   required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>; typename Eigen::internal::traits<T>::Scalar = double]’
  418 |   return internal::redux_impl<Func, ThisEvaluator>::run(thisEval, func, derived());
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:463:25:   required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::sum() const [with Derived = Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>; typename Eigen::internal::traits<T>::Scalar = double]’
  463 |   return derived().redux(Eigen::internal::scalar_sum_op<Scalar,Scalar>());
      |          ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/VectorwiseOp.h:114:1:   required from ‘ResultType Eigen::internal::member_sum<ResultType, Scalar>::operator()(const XprType&) const [with XprType = Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>; ResultType = double; Scalar = double]’
   97 |     { return mat.MEMBER(); }                                                                \
      |              ~~~~~~~~~~^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PartialReduxEvaluator.h:183:21:   required from ‘const Eigen::internal::evaluator<Eigen::PartialReduxExpr<MatrixType, MemberOp, Direction> >::Scalar Eigen::internal::evaluator<Eigen::PartialReduxExpr<MatrixType, MemberOp, Direction> >::coeff(Eigen::Index) const [with ArgType = Eigen::Matrix<double, -1, -1>; MemberOp = Eigen::internal::member_sum<double, double>; int Direction = 0; Scalar = double; Eigen::Index = long int]’
  183 |     return m_functor(m_arg.template subVector<DirectionType(Direction)>(index));
      |            ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:775:40:   [ skipping 17 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Replicate<Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, member_sum<double, double>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > >, -1, 1> >; Func = assign_op<double, double>]’
  890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:858:27:   required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing<Src>::value), void*>::type) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Replicate<Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, member_sum<double, double>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > >, -1, 1> >; Func = assign_op<double, double>; typename enable_if<(! evaluator_assume_aliasing<Src>::value), void*>::type = void*; typename evaluator_traits<SrcXprType>::Shape = Eigen::DenseShape]’
  858 |   call_assignment_no_alias(dst, src, func);
      |   ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18:   required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Replicate<Eigen::CwiseBinaryOp<scalar_quotient_op<double, double>, const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, member_sum<double, double>, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > >, -1, 1> >]’
  836 |   call_assignment(dst, src, internal::assign_op<typename Dst::Scalar,typename Src::Scalar>());
      |   ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Replicate<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > >, -1, 1> >; Derived = Eigen::Matrix<double, -1, -1>]’
  779 |       internal::call_assignment(this->derived(), other.derived());
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Replicate<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > >, -1, 1> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
  225 |       return Base::_set(other);
      |              ~~~~~~~~~~^~~~~~~
data_manipulation.cpp:229:46:   required from here
  229 |     mat = mat.rowwise() - mat.colwise().mean();
      |                                              ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  654 |   return internal::first_aligned<int(unpacket_traits<DefaultPacketType>::alignment),Derived>(m);
      |                                                                          ^~~~~~~~~
g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG  -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppEigen/include' -I'/usr/local/lib/R/library/RcppProgress/include' -I/usr/local/include    -fpic  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer    -c fast_NN_dist.cpp -o fast_NN_dist.o
fast_NN_dist.cpp: In function ‘Rcpp::List fast_dist(Rcpp::NumericMatrix, Rcpp::NumericMatrix, Rcpp::List)’:
fast_NN_dist.cpp:37:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   37 |   if (x.nrow() != ngraph_size) { return List(); }
      |       ~~~~~~~~~^~~~~~~~~~~~~~
fast_NN_dist.cpp:51:23: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘R_xlen_t’ {aka ‘long int’} [-Wsign-compare]
   51 |     for (size_t j=0; j<neighbors.size(); ++j) {
      |                      ~^~~~~~~~~~~~~~~~~
g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG  -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppEigen/include' -I'/usr/local/lib/R/library/RcppProgress/include' -I/usr/local/include    -fpic  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer    -c integration.cpp -o integration.o
In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:205,
                 from /usr/local/lib/R/library/RcppEigen/include/Eigen/Dense:1,
                 from /usr/local/lib/R/library/RcppEigen/include/RcppEigenForward.h:28,
                 from /usr/local/lib/R/library/RcppEigen/include/RcppEigen.h:25,
                 from integration.cpp:1:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
   46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i;
      |                                        ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
   47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b;
      |                                        ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument ‘__m128’ [-Wignored-attributes]
   49 | template<> struct is_arithmetic<__m128>  { enum { value = true }; };
      |                                       ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
   50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; };
      |                                        ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument ‘__m128d’ [-Wignored-attributes]
   51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; };
      |                                        ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
  222 | template<> struct unpacket_traits<Packet4f> {
      |                                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
  228 | template<> struct unpacket_traits<Packet2d> {
      |                                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
 1124 | ptranspose(PacketBlock<Packet4f,4>& kernel) {
      |                                  ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
 1129 | ptranspose(PacketBlock<Packet2d,2>& kernel) {
      |                                  ^
In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:174:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
   16 |   struct conj_helper<PACKET_REAL, PACKET_CPLX, false, false> {          \
      |                                                            ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
   29 |   struct conj_helper<PACKET_CPLX, PACKET_REAL, false, false> {          \
      |                                                            ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
   16 |   struct conj_helper<PACKET_REAL, PACKET_CPLX, false, false> {          \
      |                                                            ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
   29 |   struct conj_helper<PACKET_CPLX, PACKET_REAL, false, false> {          \
      |                                                            ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:165:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<float, 4>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57:   required from ‘struct Eigen::internal::traits<Eigen::Matrix<float, 4, 1> >’
   22 |   typedef typename find_best_packet<_Scalar,size>::type PacketScalar;
      |                                                         ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49:   required from ‘struct Eigen::internal::traits<Eigen::Quaternion<float> >’
  266 |     Alignment = internal::traits<Coefficients>::Alignment,
      |                                                 ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:24:46:   required from here
   24 |     ResAlignment = traits<Quaternion<float> >::Alignment
      |                                              ^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                                       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__m128’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
  208 |   typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
      |                                                                                        ^~~~
In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:271:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 1>’
  302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 3>’
  555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Matrix<float, 4, 1> >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Matrix<float, 4, 1> >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<float, 4, 1> >’
   98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
      |       ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<float, 4, 1>’
  178 | class Matrix
      |       ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50:   required from ‘class Eigen::QuaternionBase<Eigen::Quaternion<float> >’
   46 |   typedef typename Coefficients::CoeffReturnType CoeffReturnType;
      |                                                  ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7:   required from ‘class Eigen::Quaternion<float>’
  273 | class Quaternion : public QuaternionBase<Quaternion<_Scalar,_Options> >
      |       ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:27:3:   required from here
   27 |   {
      |   ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, 4>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57:   required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, 4, 1> >’
   22 |   typedef typename find_best_packet<_Scalar,size>::type PacketScalar;
      |                                                         ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49:   required from ‘struct Eigen::internal::traits<Eigen::Quaternion<double> >’
  266 |     Alignment = internal::traits<Coefficients>::Alignment,
      |                                                 ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:98:47:   required from here
   98 |     ResAlignment = traits<Quaternion<double> >::Alignment
      |                                               ^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                                       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  208 |   typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
      |                                                                                        ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 1>’
  302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 3>’
  555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Matrix<double, 4, 1> >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Matrix<double, 4, 1> >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, 4, 1> >’
   98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
      |       ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<double, 4, 1>’
  178 | class Matrix
      |       ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50:   required from ‘class Eigen::QuaternionBase<Eigen::Quaternion<double> >’
   46 |   typedef typename Coefficients::CoeffReturnType CoeffReturnType;
      |                                                  ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7:   required from ‘class Eigen::Quaternion<double>’
  273 | class Quaternion : public QuaternionBase<Quaternion<_Scalar,_Options> >
      |       ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:102:3:   required from here
  102 |   {
      |   ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/SparseCore:37,
                 from /usr/local/lib/R/library/RcppEigen/include/Eigen/Sparse:26,
                 from /usr/local/lib/R/library/RcppEigen/include/RcppEigenForward.h:29:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase<Eigen::SparseMatrix<double, 0, int> >’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7:   required from ‘class Eigen::SparseCompressedBase<Eigen::SparseMatrix<double, 0, int> >’
   36 | class SparseCompressedBase
      |       ^~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7:   required from ‘class Eigen::SparseMatrix<double, 0, int>’
   96 | class SparseMatrix
      |       ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25:   required from here
   61 |   typedef Triplet<double> T;
      |                         ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   47 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, -1>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57:   required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, -1, -1> >’
   22 |   typedef typename find_best_packet<_Scalar,size>::type PacketScalar;
      |                                                         ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, -1, -1> >’
   98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
      |       ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<double, -1, -1>’
  178 | class Matrix
      |       ^~~~~~
integration.cpp:23:1:   required from here
   23 | ) {
      | ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                                       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  208 |   typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
      |                                                                                        ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, -1>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, -1>, 1>’
  302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, -1>, 3>’
  555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Matrix<double, -1, -1> >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Matrix<double, -1, -1> >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, -1, -1> >’
   98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
      |       ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<double, -1, -1>’
  178 | class Matrix
      |       ^~~~~~
integration.cpp:23:1:   required from here
   23 | ) {
      | ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, 1>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, 1>, 1>’
  302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, 1>, 3>’
  555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Matrix<double, -1, 1> >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Matrix<double, -1, 1> >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, -1, 1> >’
   98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
      |       ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<double, -1, 1>’
  178 | class Matrix
      |       ^~~~~~
integration.cpp:23:1:   required from here
   23 | ) {
      | ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
integration.cpp: In function ‘Eigen::SparseMatrix<double, 0, int> FindWeightsC(Rcpp::NumericVector, Eigen::MatrixXd, std::vector<std::__cxx11::basic_string<char> >, std::vector<std::__cxx11::basic_string<char> >, Eigen::MatrixXd, Eigen::VectorXd, double, double, bool)’:
integration.cpp:29:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   29 |   for(int i=0; i<anchor_cells2.size(); ++i){
      |                ~^~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 1>’
  302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 3>’
  555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34:   required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 0>’
   37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors>
      |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34:   required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 1>’
  223 | template<typename Derived> class MapBase<Derived, WriteAccessors>
      |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7:   required from ‘class Eigen::internal::BlockImpl_dense<Eigen::Matrix<double, -1, -1>, 1, -1, false, true>’
  329 | class BlockImpl_dense<XprType,BlockRows,BlockCols, InnerPanel,true>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7:   required from ‘class Eigen::BlockImpl<Eigen::Matrix<double, -1, -1>, 1, -1, false, Eigen::Dense>’
  154 | class BlockImpl<XprType, BlockRows, BlockCols, InnerPanel, Dense>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81:   required from ‘class Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>’
  103 | template<typename XprType, int BlockRows, int BlockCols, bool InnerPanel> class Block
      |                                                                                 ^~~~~
integration.cpp:43:41:   required from here
   43 |     Eigen::VectorXd dist = distances.row(cell);
      |                            ~~~~~~~~~~~~~^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
integration.cpp:48:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   48 |       for(int j=0; j<mnn_idx.size() && k<indices.size(); ++j){
      |                    ~^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase<Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> > >’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7:   required from ‘class Eigen::SparseCompressedBase<Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> > >’
   36 | class SparseCompressedBase
      |       ^~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseTranspose.h:22:9:   required from ‘class Eigen::internal::SparseTransposeImpl<Eigen::SparseMatrix<double, 0, int>, 1024>’
   22 |   class SparseTransposeImpl<MatrixType,CompressedAccessBit>
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseTranspose.h:45:37:   required from ‘class Eigen::TransposeImpl<Eigen::SparseMatrix<double, 0, int>, Eigen::Sparse>’
   45 | template<typename MatrixType> class TransposeImpl<MatrixType,Sparse>
      |                                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37:   required from ‘class Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> >’
   52 | template<typename MatrixType> class Transpose
      |                                     ^~~~~~~~~
integration.cpp:60:53:   required from here
   60 |     Eigen::VectorXd colSums = dist_weights.transpose() * Eigen::VectorXd::Ones(dist_weights.rows());
      |                               ~~~~~~~~~~~~~~~~~~~~~~^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   47 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, 1> >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, 1> > >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, 1> > >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7:   required from ‘class Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, 1> >’
   60 | class CwiseNullaryOp : public internal::dense_xpr_base< CwiseNullaryOp<NullaryOp, PlainObjectType> >::type, internal::no_assignment_operator
      |       ^~~~~~~~~~~~~~
integration.cpp:60:79:   required from here
   60 |     Eigen::VectorXd colSums = dist_weights.transpose() * Eigen::VectorXd::Ones(dist_weights.rows());
      |                                                          ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Product<Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> >, Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, 1> >, 0>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Product<Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> >, Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, 1> >, 0> >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Product<Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> >, Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, 1> >, 0> >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7:   required from ‘class Eigen::internal::dense_product_base<Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> >, Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, 1> >, 0, 7>’
  120 | class dense_product_base
      |       ^~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7:   required from ‘class Eigen::ProductImpl<Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> >, Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, 1> >, 0, Eigen::Dense>’
  152 | class ProductImpl<Lhs,Rhs,Option,Dense>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7:   required from ‘class Eigen::Product<Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> >, Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, 1> >, 0>’
   71 | class Product : public ProductImpl<_Lhs,_Rhs,Option,
      |       ^~~~~~~
integration.cpp:60:99:   required from here
   60 |     Eigen::VectorXd colSums = dist_weights.transpose() * Eigen::VectorXd::Ones(dist_weights.rows());
      |                                                                                                   ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, -1> >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, -1> > >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, -1> > >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7:   required from ‘class Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, -1> >’
   60 | class CwiseNullaryOp : public internal::dense_xpr_base< CwiseNullaryOp<NullaryOp, PlainObjectType> >::type, internal::no_assignment_operator
      |       ^~~~~~~~~~~~~~
integration.cpp:68:61:   required from here
   68 |     Eigen::MatrixXd dist_weights = Eigen::MatrixXd::Constant(integration_matrix_rownames.size(), cells2.size(), min_dist);
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0> >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0> >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/VectorwiseOp.h:56:7:   required from ‘class Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>’
   56 | class PartialReduxExpr : public internal::dense_xpr_base< PartialReduxExpr<MatrixType, MemberOp, Direction> >::type,
      |       ^~~~~~~~~~~~~~~~
integration.cpp:77:57:   required from here
   77 |     Eigen::VectorXd colSums = dist_weights.colwise().sum();
      |                               ~~~~~~~~~~~~~~~~~~~~~~~~~~^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase<Eigen::SparseView<Eigen::Matrix<double, -1, -1> > >’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseView.h:45:7:   required from ‘class Eigen::SparseView<Eigen::Matrix<double, -1, -1> >’
   45 | class SparseView : public SparseMatrixBase<SparseView<MatrixType> >
      |       ^~~~~~~~~~
integration.cpp:83:41:   required from here
   83 |     return_mat = dist_weights.sparseView();
      |                  ~~~~~~~~~~~~~~~~~~~~~~~^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   47 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase<Eigen::Product<Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> >, Eigen::SparseMatrix<double, 0, int>, 2> >’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:145:7:   required from ‘class Eigen::ProductImpl<Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> >, Eigen::SparseMatrix<double, 0, int>, 2, Eigen::Sparse>’
  145 | class ProductImpl : public internal::generic_xpr_base<Product<Lhs,Rhs,Option>, MatrixXpr, StorageKind>::type
      |       ^~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7:   required from ‘class Eigen::Product<Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> >, Eigen::SparseMatrix<double, 0, int>, 2>’
   71 | class Product : public ProductImpl<_Lhs,_Rhs,Option,
      |       ^~~~~~~
integration.cpp:94:85:   required from here
   94 |   Eigen::SparseMatrix<double> corrected = expression_cells2 - weights.transpose() * integration_matrix;
      |                                                                                     ^~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   47 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::SparseMatrix<double, 0, int>, const Eigen::Product<Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> >, Eigen::SparseMatrix<double, 0, int>, 2> > >’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCwiseBinaryOp.h:36:7:   required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_difference_op<double, double>, const Eigen::SparseMatrix<double, 0, int>, const Eigen::Product<Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> >, Eigen::SparseMatrix<double, 0, int>, 2>, Eigen::Sparse>’
   36 | class CwiseBinaryOpImpl<BinaryOp, Lhs, Rhs, Sparse>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7:   required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::SparseMatrix<double, 0, int>, const Eigen::Product<Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> >, Eigen::SparseMatrix<double, 0, int>, 2> >’
   77 | class CwiseBinaryOp :
      |       ^~~~~~~~~~~~~
integration.cpp:94:85:   required from here
   94 |   Eigen::SparseMatrix<double> corrected = expression_cells2 - weights.transpose() * integration_matrix;
      |                                                                                     ^~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   47 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
integration.cpp: In function ‘std::vector<double> ScoreHelper(Eigen::SparseMatrix<double, 0, int>, Eigen::MatrixXd, Eigen::MatrixXd, Eigen::MatrixXd, int, bool, bool)’:
integration.cpp:135:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<long unsigned int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  135 |     if (k_snn_i > nonzero_order.size()) k_snn_i = nonzero_order.size();
      |         ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
integration.cpp:136:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<long unsigned int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  136 |     for (int j = 0; j < nonzero_order.size(); ++j) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~~
integration.cpp:139:26: warning: comparison of integer expressions of different signedness: ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  139 |       if(bw_dists.size() < k_snn_i || nonzero[nonzero_order[j]] == nonzero[nonzero_order[k_snn_i-1]]) {
      |          ~~~~~~~~~~~~~~~~^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, 1>’
  302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, 3>’
  555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34:   required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, 0>’
   37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors>
      |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34:   required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, 1>’
  223 | template<typename Derived> class MapBase<Derived, WriteAccessors>
      |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7:   required from ‘class Eigen::internal::BlockImpl_dense<Eigen::Matrix<double, -1, -1>, -1, 1, true, true>’
  329 | class BlockImpl_dense<XprType,BlockRows,BlockCols, InnerPanel,true>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7:   required from ‘class Eigen::BlockImpl<Eigen::Matrix<double, -1, -1>, -1, 1, true, Eigen::Dense>’
  154 | class BlockImpl<XprType, BlockRows, BlockCols, InnerPanel, Dense>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81:   required from ‘class Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>’
  103 | template<typename XprType, int BlockRows, int BlockCols, bool InnerPanel> class Block
      |                                                                                 ^~~~~
integration.cpp:140:36:   required from here
  140 |         double res = (query_pca.col(cell) - query_pca.col(i)).norm();
      |                       ~~~~~~~~~~~~~^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> > >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> > >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7:   required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, Eigen::Dense>’
  148 | class CwiseBinaryOpImpl
      |       ^~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7:   required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> >’
   77 | class CwiseBinaryOp :
      |       ^~~~~~~~~~~~~
integration.cpp:140:60:   required from here
  140 |         double res = (query_pca.col(cell) - query_pca.col(i)).norm();
      |                                                            ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
integration.cpp:148:25: warning: comparison of integer expressions of different signedness: ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  148 |     if (bw_dists.size() > k_snn_i) {
      |         ~~~~~~~~~~~~~~~~^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::SparseMatrix<double, 0, int>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:336:80:   required from ‘struct Eigen::internal::evaluator<Eigen::SparseCompressedBase<Eigen::SparseMatrix<double, 0, int> > >’
  336 |   typedef typename DenseCoeffsBase<Derived,ReadOnlyAccessors>::CoeffReturnType CoeffReturnType;
      |                                                                                ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1505:8:   required from ‘struct Eigen::internal::evaluator<Eigen::SparseMatrix<double, 0, int> >’
 1505 | struct evaluator<SparseMatrix<_Scalar,_Options,_StorageIndex> >
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8:   required from ‘struct Eigen::internal::evaluator<const Eigen::SparseMatrix<double, 0, int> >’
  100 | struct evaluator<const T>
      |        ^~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCwiseBinaryOp.h:64:51:   required from ‘struct Eigen::internal::binary_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::SparseMatrix<double, 0, int>, const Eigen::Product<Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> >, Eigen::SparseMatrix<double, 0, int>, 2> >, Eigen::internal::IteratorBased, Eigen::internal::IteratorBased, double, double>’
   64 |   typedef typename evaluator<Lhs>::InnerIterator  LhsIterator;
      |                                                   ^~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8:   required from ‘struct Eigen::internal::evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::SparseMatrix<double, 0, int>, const Eigen::Product<Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> >, Eigen::SparseMatrix<double, 0, int>, 2> > >’
  722 | struct evaluator<CwiseBinaryOp<BinaryOp, Lhs, Rhs> >
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:687:97:   required from ‘Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::SparseMatrix(const Eigen::SparseMatrixBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::SparseMatrix<double, 0, int>, const Eigen::Product<Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> >, Eigen::SparseMatrix<double, 0, int>, 2> >; _Scalar = double; int _Options = 0; _StorageIndex = int]’
  687 |       const bool needToTranspose = (Flags & RowMajorBit) != (internal::evaluator<OtherDerived>::Flags & RowMajorBit);
      |                                                                                                 ^~~~~
integration.cpp:94:85:   required from here
   94 |   Eigen::SparseMatrix<double> corrected = expression_cells2 - weights.transpose() * integration_matrix;
      |                                                                                     ^~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase<Eigen::SparseMatrix<double, 1> >’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7:   required from ‘class Eigen::SparseCompressedBase<Eigen::SparseMatrix<double, 1> >’
   36 | class SparseCompressedBase
      |       ^~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7:   required from ‘class Eigen::SparseMatrix<double, 1>’
   96 | class SparseMatrix
      |       ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1040:66:   required from ‘void Eigen::internal::set_from_triplets(const InputIterator&, const InputIterator&, SparseMatrixType&, DupFunctor) [with InputIterator = __gnu_cxx::__normal_iterator<Eigen::Triplet<double>*, std::vector<Eigen::Triplet<double> > >; SparseMatrixType = Eigen::SparseMatrix<double, 0, int>; DupFunctor = FindWeightsC(Rcpp::NumericVector, Eigen::MatrixXd, std::vector<std::__cxx11::basic_string<char> >, std::vector<std::__cxx11::basic_string<char> >, Eigen::MatrixXd, Eigen::VectorXd, double, double, bool)::<lambda(const double&, const double&)>]’
 1040 |   SparseMatrix<Scalar,IsRowMajor?ColMajor:RowMajor,StorageIndex> trMat(mat.rows(),mat.cols());
      |                                                                  ^~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1126:103:   required from ‘void Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::setFromTriplets(const InputIterators&, const InputIterators&, DupFunctor) [with InputIterators = __gnu_cxx::__normal_iterator<Eigen::Triplet<double>*, std::vector<Eigen::Triplet<double> > >; DupFunctor = FindWeightsC(Rcpp::NumericVector, Eigen::MatrixXd, std::vector<std::__cxx11::basic_string<char> >, std::vector<std::__cxx11::basic_string<char> >, Eigen::MatrixXd, Eigen::VectorXd, double, double, bool)::<lambda(const double&, const double&)>; _Scalar = double; int _Options = 0; _StorageIndex = int]’
 1126 |   internal::set_from_triplets<InputIterators, SparseMatrix<Scalar,_Options,_StorageIndex>, DupFunctor>(begin, end, *this, dup_func);
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
integration.cpp:59:33:   required from here
   59 |     dist_weights.setFromTriplets(tripletList.begin(), tripletList.end(), [] (const double&, const double &b) { return b; });
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   47 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> > >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> > > >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> > > >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7:   required from ‘class Eigen::CwiseUnaryOpImpl<Eigen::internal::scalar_abs2_op<double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> >, Eigen::Dense>’
   94 | class CwiseUnaryOpImpl
      |       ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7:   required from ‘class Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> > >’
   55 | class CwiseUnaryOp : public CwiseUnaryOpImpl<UnaryOp, XprType, typename internal::traits<XprType>::StorageKind>, internal::no_assignment_operator
      |       ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:98:40:   required from ‘typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real Eigen::MatrixBase<Derived>::squaredNorm() const [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> >; typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real = double; typename Eigen::internal::traits<T>::Scalar = double]’
   98 |   return numext::real((*this).cwiseAbs2().sum());
      |                       ~~~~~~~~~~~~~~~~~^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:110:23:   required from ‘typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real Eigen::MatrixBase<Derived>::norm() const [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> >; typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real = double; typename Eigen::internal::traits<T>::Scalar = double]’
  110 |   return numext::sqrt(squaredNorm());
      |                       ^~~~~~~~~~~
integration.cpp:140:67:   required from here
  140 |         double res = (query_pca.col(cell) - query_pca.col(i)).norm();
      |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::SparseMatrix<double, 1>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:336:80:   required from ‘struct Eigen::internal::evaluator<Eigen::SparseCompressedBase<Eigen::SparseMatrix<double, 1> > >’
  336 |   typedef typename DenseCoeffsBase<Derived,ReadOnlyAccessors>::CoeffReturnType CoeffReturnType;
      |                                                                                ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1505:8:   required from ‘struct Eigen::internal::evaluator<Eigen::SparseMatrix<double, 1> >’
 1505 | struct evaluator<SparseMatrix<_Scalar,_Options,_StorageIndex> >
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1181:93:   required from ‘Eigen::SparseMatrix<_Scalar, _Options, _StorageIndex>& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::operator=(const Eigen::SparseMatrixBase<OtherDerived>&) [with OtherDerived = Eigen::SparseMatrix<double, 1>; _Scalar = double; int _Options = 0; _StorageIndex = int]’
 1181 |   const bool needToTranspose = (Flags & RowMajorBit) != (internal::evaluator<OtherDerived>::Flags & RowMajorBit);
      |                                                                                             ^~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1063:7:   required from ‘void Eigen::internal::set_from_triplets(const InputIterator&, const InputIterator&, SparseMatrixType&, DupFunctor) [with InputIterator = __gnu_cxx::__normal_iterator<Eigen::Triplet<double>*, std::vector<Eigen::Triplet<double> > >; SparseMatrixType = Eigen::SparseMatrix<double, 0, int>; DupFunctor = FindWeightsC(Rcpp::NumericVector, Eigen::MatrixXd, std::vector<std::__cxx11::basic_string<char> >, std::vector<std::__cxx11::basic_string<char> >, Eigen::MatrixXd, Eigen::VectorXd, double, double, bool)::<lambda(const double&, const double&)>]’
 1063 |   mat = trMat;
      |   ~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1126:103:   required from ‘void Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::setFromTriplets(const InputIterators&, const InputIterators&, DupFunctor) [with InputIterators = __gnu_cxx::__normal_iterator<Eigen::Triplet<double>*, std::vector<Eigen::Triplet<double> > >; DupFunctor = FindWeightsC(Rcpp::NumericVector, Eigen::MatrixXd, std::vector<std::__cxx11::basic_string<char> >, std::vector<std::__cxx11::basic_string<char> >, Eigen::MatrixXd, Eigen::VectorXd, double, double, bool)::<lambda(const double&, const double&)>; _Scalar = double; int _Options = 0; _StorageIndex = int]’
 1126 |   internal::set_from_triplets<InputIterators, SparseMatrix<Scalar,_Options,_StorageIndex>, DupFunctor>(begin, end, *this, dup_func);
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
integration.cpp:59:33:   required from here
   59 |     dist_weights.setFromTriplets(tripletList.begin(), tripletList.end(), [] (const double&, const double &b) { return b; });
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Matrix<double, -1, 1> >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Matrix<double, -1, 1> >, 1>’
  302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Matrix<double, -1, 1> >, 3>’
  555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Transpose<Eigen::Matrix<double, -1, 1> > >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Transpose<Eigen::Matrix<double, -1, 1> > >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37:   required from ‘class Eigen::TransposeImpl<Eigen::Matrix<double, -1, 1>, Eigen::Dense>’
  118 | template<typename MatrixType> class TransposeImpl<MatrixType,Dense>
      |                                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37:   required from ‘class Eigen::Transpose<Eigen::Matrix<double, -1, 1> >’
   52 | template<typename MatrixType> class Transpose
      |                                     ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:883:17:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, 1>; Src = Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>; Func = assign_op<double, double>]’
  883 |   ActualDstType actualDst(dst);
      |                 ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>; Derived = Eigen::Matrix<double, -1, 1>]’
  797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>; Derived = Eigen::Matrix<double, -1, 1>]’
  594 |       _set_noalias(other);
      |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’
  423 |       : Base(other.derived())
      |                             ^
integration.cpp:43:46:   required from here
   43 |     Eigen::VectorXd dist = distances.row(cell);
      |                                              ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:277:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> >’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8:   required from ‘struct Eigen::internal::evaluator<const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> >’
  100 | struct evaluator<const T>
      |        ^~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:41:   required from ‘struct Eigen::internal::binary_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’
  739 |     CoeffReadCost = int(evaluator<Lhs>::CoeffReadCost) + int(evaluator<Rhs>::CoeffReadCost) + int(functor_traits<BinaryOp>::Cost),
      |                                         ^~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8:   required from ‘struct Eigen::internal::evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> > >’
  722 | struct evaluator<CwiseBinaryOp<BinaryOp, Lhs, Rhs> >
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8:   required from ‘struct Eigen::internal::evaluator<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> > >’
  100 | struct evaluator<const T>
      |        ^~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:564:45:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:357:7:   required from ‘class Eigen::internal::redux_evaluator<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> > > >’
  357 | class redux_evaluator : public internal::evaluator<_XprType>
      |       ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:414:17:   required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> > >; typename Eigen::internal::traits<T>::Scalar = double]’
  414 |   ThisEvaluator thisEval(derived());
      |                 ^~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:463:25:   required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::sum() const [with Derived = Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> > >; typename Eigen::internal::traits<T>::Scalar = double]’
  463 |   return derived().redux(Eigen::internal::scalar_sum_op<Scalar,Scalar>());
      |          ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:98:46:   required from ‘typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real Eigen::MatrixBase<Derived>::squaredNorm() const [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> >; typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real = double; typename Eigen::internal::traits<T>::Scalar = double]’
   98 |   return numext::real((*this).cwiseAbs2().sum());
      |                       ~~~~~~~~~~~~~~~~~~~~~~~^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:110:23:   required from ‘typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real Eigen::MatrixBase<Derived>::norm() const [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> >; typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real = double; typename Eigen::internal::traits<T>::Scalar = double]’
  110 |   return numext::sqrt(squaredNorm());
      |                       ^~~~~~~~~~~
integration.cpp:140:67:   required from here
  140 |         double res = (query_pca.col(cell) - query_pca.col(i)).norm();
      |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
 1071 |     PacketAlignment = unpacket_traits<PacketScalar>::alignment,
      |                                                      ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:774:20:   required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Transpose<Eigen::Matrix<double, -1, 1> >; SrcXprType = Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>; Functor = assign_op<double, double>]’
  774 |   SrcEvaluatorType srcEvaluator(src);
      |                    ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Transpose<Eigen::Matrix<double, -1, 1> >; SrcXprType = Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
  954 |     call_dense_assignment_loop(dst, src, func);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, 1>; Src = Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>; Func = assign_op<double, double>]’
  890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>; Derived = Eigen::Matrix<double, -1, 1>]’
  797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>; Derived = Eigen::Matrix<double, -1, 1>]’
  594 |       _set_noalias(other);
      |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’
  423 |       : Base(other.derived())
      |                             ^
integration.cpp:43:46:   required from here
   43 |     Eigen::VectorXd dist = distances.row(cell);
      |                                              ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
 1071 |     PacketAlignment = unpacket_traits<PacketScalar>::alignment,
      |                                                      ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase<Derived>&) [with Derived = Eigen::CwiseUnaryOp<scalar_abs2_op<double>, const Eigen::CwiseBinaryOp<scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> > >; Eigen::Index = long int]’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:243:63:   required from ‘static Eigen::internal::redux_impl<Func, Evaluator, 3, 0>::Scalar Eigen::internal::redux_impl<Func, Evaluator, 3, 0>::run(const Evaluator&, const Func&, const XprType&) [with XprType = Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> > >; Func = Eigen::internal::scalar_sum_op<double, double>; Evaluator = Eigen::internal::redux_evaluator<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> > > >; Scalar = double]’
  243 |     const Index alignedStart = internal::first_default_aligned(xpr);
      |                                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56:   required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> > >; typename Eigen::internal::traits<T>::Scalar = double]’
  418 |   return internal::redux_impl<Func, ThisEvaluator>::run(thisEval, func, derived());
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:463:25:   required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::sum() const [with Derived = Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> > >; typename Eigen::internal::traits<T>::Scalar = double]’
  463 |   return derived().redux(Eigen::internal::scalar_sum_op<Scalar,Scalar>());
      |          ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:98:46:   required from ‘typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real Eigen::MatrixBase<Derived>::squaredNorm() const [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> >; typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real = double; typename Eigen::internal::traits<T>::Scalar = double]’
   98 |   return numext::real((*this).cwiseAbs2().sum());
      |                       ~~~~~~~~~~~~~~~~~~~~~~~^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:110:23:   required from ‘typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real Eigen::MatrixBase<Derived>::norm() const [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> >; typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real = double; typename Eigen::internal::traits<T>::Scalar = double]’
  110 |   return numext::sqrt(squaredNorm());
      |                       ^~~~~~~~~~~
integration.cpp:140:67:   required from here
  140 |         double res = (query_pca.col(cell) - query_pca.col(i)).norm();
      |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  654 |   return internal::first_aligned<int(unpacket_traits<DefaultPacketType>::alignment),Derived>(m);
      |                                                                          ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, 2>’
  481 | class DenseCoeffsBase<Derived, DirectAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34:   required from ‘class Eigen::MapBase<Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, 0>’
   37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors>
      |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7:   required from ‘class Eigen::internal::BlockImpl_dense<const Eigen::Matrix<double, -1, -1>, -1, 1, true, true>’
  329 | class BlockImpl_dense<XprType,BlockRows,BlockCols, InnerPanel,true>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Transpose<Eigen::Matrix<double, -1, 1> >; SrcXprType = Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
  954 |     call_dense_assignment_loop(dst, src, func);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, 1>; Src = Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, member_sum<double, double>, 0>; Func = assign_op<double, double>]’
  890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>; Derived = Eigen::Matrix<double, -1, 1>]’
  797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>; Derived = Eigen::Matrix<double, -1, 1>]’
  594 |       _set_noalias(other);
      |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’
  423 |       : Base(other.derived())
      |                             ^
integration.cpp:77:58:   required from here
   77 |     Eigen::VectorXd colSums = dist_weights.colwise().sum();
      |                                                          ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:357:7:   required from ‘class Eigen::internal::redux_evaluator<Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >’
  357 | class redux_evaluator : public internal::evaluator<_XprType>
      |       ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:414:17:   required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>; typename Eigen::internal::traits<T>::Scalar = double]’
  414 |   ThisEvaluator thisEval(derived());
      |                 ^~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:463:25:   required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::sum() const [with Derived = Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>; typename Eigen::internal::traits<T>::Scalar = double]’
  463 |   return derived().redux(Eigen::internal::scalar_sum_op<Scalar,Scalar>());
      |          ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/VectorwiseOp.h:114:1:   required from ‘ResultType Eigen::internal::member_sum<ResultType, Scalar>::operator()(const XprType&) const [with XprType = Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>; ResultType = double; Scalar = double]’
   97 |     { return mat.MEMBER(); }                                                                \
      |              ~~~~~~~~~~^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PartialReduxEvaluator.h:183:21:   required from ‘const Eigen::internal::evaluator<Eigen::PartialReduxExpr<MatrixType, MemberOp, Direction> >::Scalar Eigen::internal::evaluator<Eigen::PartialReduxExpr<MatrixType, MemberOp, Direction> >::coeff(Eigen::Index) const [with ArgType = Eigen::Matrix<double, -1, -1>; MemberOp = Eigen::internal::member_sum<double, double>; int Direction = 0; Scalar = double; Eigen::Index = long int]’
  183 |     return m_functor(m_arg.template subVector<DirectionType(Direction)>(index));
      |            ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:660:61:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Transpose<Eigen::Matrix<double, -1, 1> >; SrcXprType = Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
  954 |     call_dense_assignment_loop(dst, src, func);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, 1>; Src = Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, member_sum<double, double>, 0>; Func = assign_op<double, double>]’
  890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>; Derived = Eigen::Matrix<double, -1, 1>]’
  797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>; Derived = Eigen::Matrix<double, -1, 1>]’
  594 |       _set_noalias(other);
      |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’
  423 |       : Base(other.derived())
      |                             ^
integration.cpp:77:58:   required from here
   77 |     Eigen::VectorXd colSums = dist_weights.colwise().sum();
      |                                                          ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
 1071 |     PacketAlignment = unpacket_traits<PacketScalar>::alignment,
      |                                                      ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase<Derived>&) [with Derived = Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>; Eigen::Index = long int]’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:243:63:   required from ‘static Eigen::internal::redux_impl<Func, Evaluator, 3, 0>::Scalar Eigen::internal::redux_impl<Func, Evaluator, 3, 0>::run(const Evaluator&, const Func&, const XprType&) [with XprType = Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>; Func = Eigen::internal::scalar_sum_op<double, double>; Evaluator = Eigen::internal::redux_evaluator<Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >; Scalar = double]’
  243 |     const Index alignedStart = internal::first_default_aligned(xpr);
      |                                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56:   required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>; typename Eigen::internal::traits<T>::Scalar = double]’
  418 |   return internal::redux_impl<Func, ThisEvaluator>::run(thisEval, func, derived());
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:463:25:   required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::sum() const [with Derived = Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>; typename Eigen::internal::traits<T>::Scalar = double]’
  463 |   return derived().redux(Eigen::internal::scalar_sum_op<Scalar,Scalar>());
      |          ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/VectorwiseOp.h:114:1:   required from ‘ResultType Eigen::internal::member_sum<ResultType, Scalar>::operator()(const XprType&) const [with XprType = Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>; ResultType = double; Scalar = double]’
   97 |     { return mat.MEMBER(); }                                                                \
      |              ~~~~~~~~~~^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PartialReduxEvaluator.h:183:21:   required from ‘const Eigen::internal::evaluator<Eigen::PartialReduxExpr<MatrixType, MemberOp, Direction> >::Scalar Eigen::internal::evaluator<Eigen::PartialReduxExpr<MatrixType, MemberOp, Direction> >::coeff(Eigen::Index) const [with ArgType = Eigen::Matrix<double, -1, -1>; MemberOp = Eigen::internal::member_sum<double, double>; int Direction = 0; Scalar = double; Eigen::Index = long int]’
  183 |     return m_functor(m_arg.template subVector<DirectionType(Direction)>(index));
      |            ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:660:61:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Transpose<Eigen::Matrix<double, -1, 1> >; SrcXprType = Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
  954 |     call_dense_assignment_loop(dst, src, func);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, 1>; Src = Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, member_sum<double, double>, 0>; Func = assign_op<double, double>]’
  890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>; Derived = Eigen::Matrix<double, -1, 1>]’
  797 |       internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>; Derived = Eigen::Matrix<double, -1, 1>]’
  594 |       _set_noalias(other);
      |       ~~~~~~~~~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::PartialReduxExpr<Eigen::Matrix<double, -1, -1>, Eigen::internal::member_sum<double, double>, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’
  423 |       : Base(other.derived())
      |                             ^
integration.cpp:77:58:   required from here
   77 |     Eigen::VectorXd colSums = dist_weights.colwise().sum();
      |                                                          ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  654 |   return internal::first_aligned<int(unpacket_traits<DefaultPacketType>::alignment),Derived>(m);
      |                                                                          ^~~~~~~~~
g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG  -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppEigen/include' -I'/usr/local/lib/R/library/RcppProgress/include' -I/usr/local/include    -fpic  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer    -c snn.cpp -o snn.o
In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:205,
                 from /usr/local/lib/R/library/RcppEigen/include/Eigen/Dense:1,
                 from /usr/local/lib/R/library/RcppEigen/include/RcppEigenForward.h:28,
                 from /usr/local/lib/R/library/RcppEigen/include/RcppEigen.h:25,
                 from snn.cpp:1:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
   46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i;
      |                                        ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
   47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b;
      |                                        ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument ‘__m128’ [-Wignored-attributes]
   49 | template<> struct is_arithmetic<__m128>  { enum { value = true }; };
      |                                       ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
   50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; };
      |                                        ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument ‘__m128d’ [-Wignored-attributes]
   51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; };
      |                                        ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
  222 | template<> struct unpacket_traits<Packet4f> {
      |                                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
  228 | template<> struct unpacket_traits<Packet2d> {
      |                                           ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
 1124 | ptranspose(PacketBlock<Packet4f,4>& kernel) {
      |                                  ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
 1129 | ptranspose(PacketBlock<Packet2d,2>& kernel) {
      |                                  ^
In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:174:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
   16 |   struct conj_helper<PACKET_REAL, PACKET_CPLX, false, false> {          \
      |                                                            ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
   29 |   struct conj_helper<PACKET_CPLX, PACKET_REAL, false, false> {          \
      |                                                            ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
   16 |   struct conj_helper<PACKET_REAL, PACKET_CPLX, false, false> {          \
      |                                                            ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
   29 |   struct conj_helper<PACKET_CPLX, PACKET_REAL, false, false> {          \
      |                                                            ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:165:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<float, 4>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57:   required from ‘struct Eigen::internal::traits<Eigen::Matrix<float, 4, 1> >’
   22 |   typedef typename find_best_packet<_Scalar,size>::type PacketScalar;
      |                                                         ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49:   required from ‘struct Eigen::internal::traits<Eigen::Quaternion<float> >’
  266 |     Alignment = internal::traits<Coefficients>::Alignment,
      |                                                 ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:24:46:   required from here
   24 |     ResAlignment = traits<Quaternion<float> >::Alignment
      |                                              ^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                                       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__m128’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
  208 |   typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
      |                                                                                        ^~~~
In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:271:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 1>’
  302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 3>’
  555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Matrix<float, 4, 1> >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Matrix<float, 4, 1> >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<float, 4, 1> >’
   98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
      |       ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<float, 4, 1>’
  178 | class Matrix
      |       ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50:   required from ‘class Eigen::QuaternionBase<Eigen::Quaternion<float> >’
   46 |   typedef typename Coefficients::CoeffReturnType CoeffReturnType;
      |                                                  ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7:   required from ‘class Eigen::Quaternion<float>’
  273 | class Quaternion : public QuaternionBase<Quaternion<_Scalar,_Options> >
      |       ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:27:3:   required from here
   27 |   {
      |   ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, 4>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57:   required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, 4, 1> >’
   22 |   typedef typename find_best_packet<_Scalar,size>::type PacketScalar;
      |                                                         ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49:   required from ‘struct Eigen::internal::traits<Eigen::Quaternion<double> >’
  266 |     Alignment = internal::traits<Coefficients>::Alignment,
      |                                                 ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:98:47:   required from here
   98 |     ResAlignment = traits<Quaternion<double> >::Alignment
      |                                               ^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                                       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  208 |   typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
      |                                                                                        ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 1>’
  302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 3>’
  555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Matrix<double, 4, 1> >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Matrix<double, 4, 1> >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, 4, 1> >’
   98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
      |       ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<double, 4, 1>’
  178 | class Matrix
      |       ^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50:   required from ‘class Eigen::QuaternionBase<Eigen::Quaternion<double> >’
   46 |   typedef typename Coefficients::CoeffReturnType CoeffReturnType;
      |                                                  ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7:   required from ‘class Eigen::Quaternion<double>’
  273 | class Quaternion : public QuaternionBase<Quaternion<_Scalar,_Options> >
      |       ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:102:3:   required from here
  102 |   {
      |   ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/SparseCore:37,
                 from /usr/local/lib/R/library/RcppEigen/include/Eigen/Sparse:26,
                 from /usr/local/lib/R/library/RcppEigen/include/RcppEigenForward.h:29:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase<Eigen::SparseMatrix<double, 0, int> >’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7:   required from ‘class Eigen::SparseCompressedBase<Eigen::SparseMatrix<double, 0, int> >’
   36 | class SparseCompressedBase
      |       ^~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7:   required from ‘class Eigen::SparseMatrix<double, 0, int>’
   96 | class SparseMatrix
      |       ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25:   required from here
   61 |   typedef Triplet<double> T;
      |                         ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   47 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, -1>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57:   required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, -1, -1> >’
   22 |   typedef typename find_best_packet<_Scalar,size>::type PacketScalar;
      |                                                         ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, -1, -1> >’
   98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
      |       ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<double, -1, -1>’
  178 | class Matrix
      |       ^~~~~~
snn.cpp:16:79:   required from here
   16 | Eigen::SparseMatrix<double> ComputeSNN(Eigen::MatrixXd nn_ranked, double prune) {
      |                                                                               ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                                       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  208 |   typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
      |                                                                                        ^~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, -1>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, -1>, 1>’
  302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, -1>, 3>’
  555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Matrix<double, -1, -1> >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Matrix<double, -1, -1> >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, -1, -1> >’
   98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
      |       ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<double, -1, -1>’
  178 | class Matrix
      |       ^~~~~~
snn.cpp:16:79:   required from here
   16 | Eigen::SparseMatrix<double> ComputeSNN(Eigen::MatrixXd nn_ranked, double prune) {
      |                                                                               ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase<Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> > >’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7:   required from ‘class Eigen::SparseCompressedBase<Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> > >’
   36 | class SparseCompressedBase
      |       ^~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseTranspose.h:22:9:   required from ‘class Eigen::internal::SparseTransposeImpl<Eigen::SparseMatrix<double, 0, int>, 1024>’
   22 |   class SparseTransposeImpl<MatrixType,CompressedAccessBit>
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseTranspose.h:45:37:   required from ‘class Eigen::TransposeImpl<Eigen::SparseMatrix<double, 0, int>, Eigen::Sparse>’
   45 | template<typename MatrixType> class TransposeImpl<MatrixType,Sparse>
      |                                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37:   required from ‘class Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> >’
   52 | template<typename MatrixType> class Transpose
      |                                     ^~~~~~~~~
snn.cpp:27:29:   required from here
   27 |   SNN = SNN * (SNN.transpose());
      |                ~~~~~~~~~~~~~^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   47 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase<Eigen::Product<Eigen::SparseMatrix<double, 0, int>, Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> >, 2> >’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:145:7:   required from ‘class Eigen::ProductImpl<Eigen::SparseMatrix<double, 0, int>, Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> >, 2, Eigen::Sparse>’
  145 | class ProductImpl : public internal::generic_xpr_base<Product<Lhs,Rhs,Option>, MatrixXpr, StorageKind>::type
      |       ^~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7:   required from ‘class Eigen::Product<Eigen::SparseMatrix<double, 0, int>, Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> >, 2>’
   71 | class Product : public ProductImpl<_Lhs,_Rhs,Option,
      |       ^~~~~~~
snn.cpp:27:31:   required from here
   27 |   SNN = SNN * (SNN.transpose());
      |                               ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   47 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
snn.cpp: In function ‘std::vector<double> SNN_SmallestNonzero_Dist(Eigen::SparseMatrix<double, 0, int>, Eigen::MatrixXd, int, std::vector<double>)’:
snn.cpp:99:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<long unsigned int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   99 |     if (n_i > nonzero_order.size()) n_i = nonzero_order.size();
      |         ~~~~^~~~~~~~~~~~~~~~~~~~~~
snn.cpp:101:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<long unsigned int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  101 |     for (int j = 0; j < nonzero_order.size(); ++j) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~~
snn.cpp:105:23: warning: comparison of integer expressions of different signedness: ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  105 |       if(dists.size() < n_i  || nonzero[nonzero_order[j]] == nonzero[nonzero_order[n_i-1]]) {
      |          ~~~~~~~~~~~~~^~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 1>’
  302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 3>’
  555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34:   required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 0>’
   37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors>
      |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34:   required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 1>’
  223 | template<typename Derived> class MapBase<Derived, WriteAccessors>
      |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7:   required from ‘class Eigen::internal::BlockImpl_dense<Eigen::Matrix<double, -1, -1>, 1, -1, false, true>’
  329 | class BlockImpl_dense<XprType,BlockRows,BlockCols, InnerPanel,true>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7:   required from ‘class Eigen::BlockImpl<Eigen::Matrix<double, -1, -1>, 1, -1, false, Eigen::Dense>’
  154 | class BlockImpl<XprType, BlockRows, BlockCols, InnerPanel, Dense>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81:   required from ‘class Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>’
  103 | template<typename XprType, int BlockRows, int BlockCols, bool InnerPanel> class Block
      |                                                                                 ^~~~~
snn.cpp:106:30:   required from here
  106 |         double res = (mat.row(cell) - mat.row(i)).norm();
      |                       ~~~~~~~^~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> > >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> > >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7:   required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, Eigen::Dense>’
  148 | class CwiseBinaryOpImpl
      |       ^~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7:   required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >’
   77 | class CwiseBinaryOp :
      |       ^~~~~~~~~~~~~
snn.cpp:106:48:   required from here
  106 |         double res = (mat.row(cell) - mat.row(i)).norm();
      |                                                ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
snn.cpp:117:22: warning: comparison of integer expressions of different signedness: ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  117 |     if (dists.size() > n_i) {
      |         ~~~~~~~~~~~~~^~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase<Eigen::SparseMatrix<double, 1> >’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7:   required from ‘class Eigen::SparseCompressedBase<Eigen::SparseMatrix<double, 1> >’
   36 | class SparseCompressedBase
      |       ^~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7:   required from ‘class Eigen::SparseMatrix<double, 1>’
   96 | class SparseMatrix
      |       ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1040:66:   required from ‘void Eigen::internal::set_from_triplets(const InputIterator&, const InputIterator&, SparseMatrixType&, DupFunctor) [with InputIterator = __gnu_cxx::__normal_iterator<Eigen::Triplet<double>*, std::vector<Eigen::Triplet<double> > >; SparseMatrixType = Eigen::SparseMatrix<double, 0, int>; DupFunctor = scalar_sum_op<double, double>]’
 1040 |   SparseMatrix<Scalar,IsRowMajor?ColMajor:RowMajor,StorageIndex> trMat(mat.rows(),mat.cols());
      |                                                                  ^~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1110:92:   required from ‘void Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::setFromTriplets(const InputIterators&, const InputIterators&) [with InputIterators = __gnu_cxx::__normal_iterator<Eigen::Triplet<double>*, std::vector<Eigen::Triplet<double> > >; _Scalar = double; int _Options = 0; _StorageIndex = int]’
 1110 |   internal::set_from_triplets<InputIterators, SparseMatrix<Scalar,_Options,_StorageIndex> >(begin, end, *this, internal::scalar_sum_op<Scalar,Scalar>());
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
snn.cpp:26:22:   required from here
   26 |   SNN.setFromTriplets(tripletList.begin(), tripletList.end());
      |   ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   47 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> > >, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> > > >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> > > >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7:   required from ‘class Eigen::CwiseUnaryOpImpl<Eigen::internal::scalar_abs2_op<double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >, Eigen::Dense>’
   94 | class CwiseUnaryOpImpl
      |       ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7:   required from ‘class Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> > >’
   55 | class CwiseUnaryOp : public CwiseUnaryOpImpl<UnaryOp, XprType, typename internal::traits<XprType>::StorageKind>, internal::no_assignment_operator
      |       ^~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:98:40:   required from ‘typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real Eigen::MatrixBase<Derived>::squaredNorm() const [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >; typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real = double; typename Eigen::internal::traits<T>::Scalar = double]’
   98 |   return numext::real((*this).cwiseAbs2().sum());
      |                       ~~~~~~~~~~~~~~~~~^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:110:23:   required from ‘typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real Eigen::MatrixBase<Derived>::norm() const [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >; typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real = double; typename Eigen::internal::traits<T>::Scalar = double]’
  110 |   return numext::sqrt(squaredNorm());
      |                       ^~~~~~~~~~~
snn.cpp:106:55:   required from here
  106 |         double res = (mat.row(cell) - mat.row(i)).norm();
      |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::SparseMatrix<double, 1>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:336:80:   required from ‘struct Eigen::internal::evaluator<Eigen::SparseCompressedBase<Eigen::SparseMatrix<double, 1> > >’
  336 |   typedef typename DenseCoeffsBase<Derived,ReadOnlyAccessors>::CoeffReturnType CoeffReturnType;
      |                                                                                ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1505:8:   required from ‘struct Eigen::internal::evaluator<Eigen::SparseMatrix<double, 1> >’
 1505 | struct evaluator<SparseMatrix<_Scalar,_Options,_StorageIndex> >
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1181:93:   required from ‘Eigen::SparseMatrix<_Scalar, _Options, _StorageIndex>& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::operator=(const Eigen::SparseMatrixBase<OtherDerived>&) [with OtherDerived = Eigen::SparseMatrix<double, 1>; _Scalar = double; int _Options = 0; _StorageIndex = int]’
 1181 |   const bool needToTranspose = (Flags & RowMajorBit) != (internal::evaluator<OtherDerived>::Flags & RowMajorBit);
      |                                                                                             ^~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1063:7:   required from ‘void Eigen::internal::set_from_triplets(const InputIterator&, const InputIterator&, SparseMatrixType&, DupFunctor) [with InputIterator = __gnu_cxx::__normal_iterator<Eigen::Triplet<double>*, std::vector<Eigen::Triplet<double> > >; SparseMatrixType = Eigen::SparseMatrix<double, 0, int>; DupFunctor = scalar_sum_op<double, double>]’
 1063 |   mat = trMat;
      |   ~~~~^~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1110:92:   required from ‘void Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::setFromTriplets(const InputIterators&, const InputIterators&) [with InputIterators = __gnu_cxx::__normal_iterator<Eigen::Triplet<double>*, std::vector<Eigen::Triplet<double> > >; _Scalar = double; int _Options = 0; _StorageIndex = int]’
 1110 |   internal::set_from_triplets<InputIterators, SparseMatrix<Scalar,_Options,_StorageIndex> >(begin, end, *this, internal::scalar_sum_op<Scalar,Scalar>());
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
snn.cpp:26:22:   required from here
   26 |   SNN.setFromTriplets(tripletList.begin(), tripletList.end());
      |   ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::SparseMatrix<double, 0, int>, 0>’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:336:80:   required from ‘struct Eigen::internal::evaluator<Eigen::SparseCompressedBase<Eigen::SparseMatrix<double, 0, int> > >’
  336 |   typedef typename DenseCoeffsBase<Derived,ReadOnlyAccessors>::CoeffReturnType CoeffReturnType;
      |                                                                                ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1505:8:   required from ‘struct Eigen::internal::evaluator<Eigen::SparseMatrix<double, 0, int> >’
 1505 | struct evaluator<SparseMatrix<_Scalar,_Options,_StorageIndex> >
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseUtil.h:121:8:   required from ‘struct Eigen::internal::plain_object_eval<Eigen::SparseMatrix<double, 0, int>, Eigen::Sparse>’
  121 | struct plain_object_eval<T,Sparse>
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseProduct.h:71:53:   required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::SparseShape, Eigen::SparseShape, ProductType>::evalTo(Dest&, const Lhs&, const Rhs&, Eigen::SparseShape) [with Dest = Eigen::SparseMatrix<double, 0, int>; Lhs = Eigen::SparseMatrix<double, 0, int>; Rhs = Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> >; int ProductType = 8]’
   71 |     typedef typename nested_eval<Lhs,Dynamic>::type LhsNested;
      |                                                     ^~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseProduct.h:43:11:   required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::SparseShape, Eigen::SparseShape, ProductType>::evalTo(Dest&, const Lhs&, const Rhs&) [with Dest = Eigen::SparseMatrix<double, 0, int>; Lhs = Eigen::SparseMatrix<double, 0, int>; Rhs = Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> >; int ProductType = 8]’
   43 |     evalTo(dst, lhs, rhs, typename evaluator_traits<Dest>::Shape());
      |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseProduct.h:174:51:   required from ‘Eigen::SparseMatrix<_Scalar, _Options, _StorageIndex>& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::operator=(const Eigen::Product<Lhs, Rhs, 2>&) [with Lhs = Eigen::SparseMatrix<double, 0, int>; Rhs = Eigen::Transpose<Eigen::SparseMatrix<double, 0, int> >; _Scalar = double; int _Options = 0; _StorageIndex = int]’
  174 |   internal::generic_product_impl<Lhs, Rhs>::evalTo(dst,src.lhs(),src.rhs());
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
snn.cpp:27:31:   required from here
   27 |   SNN = SNN * (SNN.transpose());
      |                               ^
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:277:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >’:
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8:   required from ‘struct Eigen::internal::evaluator<const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >’
  100 | struct evaluator<const T>
      |        ^~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:41:   required from ‘struct Eigen::internal::binary_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’
  739 |     CoeffReadCost = int(evaluator<Lhs>::CoeffReadCost) + int(evaluator<Rhs>::CoeffReadCost) + int(functor_traits<BinaryOp>::Cost),
      |                                         ^~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8:   required from ‘struct Eigen::internal::evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> > >’
  722 | struct evaluator<CwiseBinaryOp<BinaryOp, Lhs, Rhs> >
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8:   required from ‘struct Eigen::internal::evaluator<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> > >’
  100 | struct evaluator<const T>
      |        ^~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:564:45:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:357:7:   required from ‘class Eigen::internal::redux_evaluator<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> > > >’
  357 | class redux_evaluator : public internal::evaluator<_XprType>
      |       ^~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:414:17:   required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> > >; typename Eigen::internal::traits<T>::Scalar = double]’
  414 |   ThisEvaluator thisEval(derived());
      |                 ^~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:463:25:   required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::sum() const [with Derived = Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> > >; typename Eigen::internal::traits<T>::Scalar = double]’
  463 |   return derived().redux(Eigen::internal::scalar_sum_op<Scalar,Scalar>());
      |          ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:98:46:   required from ‘typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real Eigen::MatrixBase<Derived>::squaredNorm() const [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >; typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real = double; typename Eigen::internal::traits<T>::Scalar = double]’
   98 |   return numext::real((*this).cwiseAbs2().sum());
      |                       ~~~~~~~~~~~~~~~~~~~~~~~^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:110:23:   required from ‘typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real Eigen::MatrixBase<Derived>::norm() const [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >; typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real = double; typename Eigen::internal::traits<T>::Scalar = double]’
  110 |   return numext::sqrt(squaredNorm());
      |                       ^~~~~~~~~~~
snn.cpp:106:55:   required from here
  106 |         double res = (mat.row(cell) - mat.row(i)).norm();
      |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
/usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
 1071 |     PacketAlignment = unpacket_traits<PacketScalar>::alignment,
      |                                                      ^~~~~~~~~
g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG  -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppEigen/include' -I'/usr/local/lib/R/library/RcppProgress/include' -I/usr/local/include    -fpic  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer    -c stats.cpp -o stats.o
gcc -I"/usr/include/R" -DNDEBUG  -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppEigen/include' -I'/usr/local/lib/R/library/RcppProgress/include' -I/usr/local/include    -fpic  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer   -c valid_pointer.c -o valid_pointer.o
g++ -std=gnu++17 -shared -L/usr/lib64/R/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o Seurat.so ModularityOptimizer.o RModularityOptimizer.o RcppExports.o data_manipulation.o fast_NN_dist.o integration.o snn.o stats.o valid_pointer.o -L/usr/lib64/R/lib -lR
installing to /builddir/build/BUILD/R-CRAN-Seurat-5.3.0-build/BUILDROOT/usr/local/lib/R/library/00LOCK-Seurat/00new/Seurat/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
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    AddAzimuthResults                       html  
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** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (Seurat)
+ test -d Seurat/src
+ cd Seurat/src
+ rm -f ModularityOptimizer.o RModularityOptimizer.o RcppExports.o data_manipulation.o fast_NN_dist.o integration.o snn.o stats.o valid_pointer.o Seurat.so
+ rm -f /builddir/build/BUILD/R-CRAN-Seurat-5.3.0-build/BUILDROOT/usr/local/lib/R/library/R.css
+ find /builddir/build/BUILD/R-CRAN-Seurat-5.3.0-build/BUILDROOT/usr/local/lib/R/library -type f -exec sed -i s@/builddir/build/BUILD/R-CRAN-Seurat-5.3.0-build/BUILDROOT@@g '{}' ';'
+ /usr/bin/find-debuginfo -j2 --strict-build-id -m -i --build-id-seed 5.3.0-1.fc41.copr8957487 --unique-debug-suffix -5.3.0-1.fc41.copr8957487.x86_64 --unique-debug-src-base R-CRAN-Seurat-5.3.0-1.fc41.copr8957487.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/R-CRAN-Seurat-5.3.0-build/Seurat
find-debuginfo: starting
Extracting debug info from 1 files
DWARF-compressing 1 files
sepdebugcrcfix: Updated 1 CRC32s, 0 CRC32s did match.
Creating .debug symlinks for symlinks to ELF files
Copying sources found by 'debugedit -l' to /usr/src/debug/R-CRAN-Seurat-5.3.0-1.fc41.copr8957487.x86_64
find-debuginfo: done
+ /usr/lib/rpm/check-buildroot
+ /usr/lib/rpm/redhat/brp-ldconfig
+ /usr/lib/rpm/brp-compress
+ /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip
+ /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip
+ /usr/lib/rpm/redhat/brp-mangle-shebangs
+ /usr/lib/rpm/brp-remove-la-files
+ env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j2
+ /usr/lib/rpm/redhat/brp-python-hardlink
+ /usr/bin/add-determinism --brp -j2 /builddir/build/BUILD/R-CRAN-Seurat-5.3.0-build/BUILDROOT
Scanned 28 directories and 774 files,
               processed 735 inodes,
               0 modified (0 replaced + 0 rewritten),
               0 unsupported format, 0 errors
Reading /builddir/build/BUILD/R-CRAN-Seurat-5.3.0-build/SPECPARTS/rpm-debuginfo.specpart
Processing files: R-CRAN-Seurat-5.3.0-1.fc41.copr8957487.x86_64
Provides: R-CRAN-Seurat = 5.3.0-1.fc41.copr8957487 R-CRAN-Seurat(x86-64) = 5.3.0-1.fc41.copr8957487
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: libR.so()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.11)(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_2.4)(64bit) libc.so.6(GLIBC_ABI_DT_RELR)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.29)(64bit) libm.so.6(GLIBC_2.38)(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.15)(64bit) libstdc++.so.6(CXXABI_1.3.5)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.19)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) rtld(GNU_HASH)
Processing files: R-CRAN-Seurat-debugsource-5.3.0-1.fc41.copr8957487.x86_64
Provides: R-CRAN-Seurat-debugsource = 5.3.0-1.fc41.copr8957487 R-CRAN-Seurat-debugsource(x86-64) = 5.3.0-1.fc41.copr8957487
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Processing files: R-CRAN-Seurat-debuginfo-5.3.0-1.fc41.copr8957487.x86_64
Provides: R-CRAN-Seurat-debuginfo = 5.3.0-1.fc41.copr8957487 R-CRAN-Seurat-debuginfo(x86-64) = 5.3.0-1.fc41.copr8957487 debuginfo(build-id) = 59bc070e8ffdc8987f6497fd66b871d36ea2c241
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: R-CRAN-Seurat-debugsource(x86-64) = 5.3.0-1.fc41.copr8957487
Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILD/R-CRAN-Seurat-5.3.0-build/BUILDROOT
Wrote: /builddir/build/RPMS/R-CRAN-Seurat-5.3.0-1.fc41.copr8957487.x86_64.rpm
Wrote: /builddir/build/RPMS/R-CRAN-Seurat-debugsource-5.3.0-1.fc41.copr8957487.x86_64.rpm
Wrote: /builddir/build/RPMS/R-CRAN-Seurat-debuginfo-5.3.0-1.fc41.copr8957487.x86_64.rpm
Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.SvtExJ
+ umask 022
+ cd /builddir/build/BUILD/R-CRAN-Seurat-5.3.0-build
+ test -d /builddir/build/BUILD/R-CRAN-Seurat-5.3.0-build
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/R-CRAN-Seurat-5.3.0-build
+ rm -rf /builddir/build/BUILD/R-CRAN-Seurat-5.3.0-build
+ RPM_EC=0

RPM build warnings:
++ jobs -p
+ exit 0
    %source_date_epoch_from_changelog is set, but %changelog has no entries to take a date from
Finish: rpmbuild R-CRAN-Seurat-5.3.0-1.fc41.copr8957487.src.rpm
Finish: build phase for R-CRAN-Seurat-5.3.0-1.fc41.copr8957487.src.rpm
INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan
INFO: /var/lib/mock/fedora-41-x86_64-1745459939.298449/root/var/log/dnf5.log
INFO: chroot_scan: creating tarball /var/lib/copr-rpmbuild/results/chroot_scan.tar.gz
/bin/tar: Removing leading `/' from member names
INFO: Done(/var/lib/copr-rpmbuild/results/R-CRAN-Seurat-5.3.0-1.fc41.copr8957487.src.rpm) Config(child) 2 minutes 0 seconds
INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results
INFO: Cleaning up build root ('cleanup_on_success=True')
Start: clean chroot
INFO: unmounting tmpfs.
Finish: clean chroot
Finish: run
Running RPMResults tool
Package info:
{
    "packages": [
        {
            "name": "R-CRAN-Seurat",
            "epoch": null,
            "version": "5.3.0",
            "release": "1.fc41.copr8957487",
            "arch": "x86_64"
        },
        {
            "name": "R-CRAN-Seurat",
            "epoch": null,
            "version": "5.3.0",
            "release": "1.fc41.copr8957487",
            "arch": "src"
        },
        {
            "name": "R-CRAN-Seurat-debugsource",
            "epoch": null,
            "version": "5.3.0",
            "release": "1.fc41.copr8957487",
            "arch": "x86_64"
        },
        {
            "name": "R-CRAN-Seurat-debuginfo",
            "epoch": null,
            "version": "5.3.0",
            "release": "1.fc41.copr8957487",
            "arch": "x86_64"
        }
    ]
}
RPMResults finished