qc_variance_hist {gimap} | R Documentation |
Create a histogram for the variance within replicates for each pgRNA
Description
This function uses pivot_longer to rearrange the data for plotting, finds the variance for each pgRNA construct (using row number as a proxy) and then plots a histogram of these variances
Usage
qc_variance_hist(
gimap_dataset,
filter_replicates_target_col = NULL,
wide_ar = 0.75
)
Arguments
gimap_dataset |
The special gimap_dataset from the 'setup_data' function which contains the transformed data |
filter_replicates_target_col |
default is NULL; Which sample columns are replicates whose variation you'd like to analyze; If NULL, the last 3 sample columns are used |
wide_ar |
aspect ratio, default is 0.75 |
Value
a ggplot histogram
Examples
## Not run:
gimap_dataset <- get_example_data("gimap")
qc_variance_hist(gimap_dataset)
## End(Not run)
[Package gimap version 1.1.1 Index]