fortify_data_frame.phylo {ggalign} | R Documentation |
Build a data frame
Description
This function converts various objects to a data frame.
Usage
## S3 method for class 'phylo'
fortify_data_frame(
data,
...,
type = "rectangle",
center = FALSE,
tree_type = NULL,
tip_pos = NULL,
data_arg = NULL,
call = NULL
)
Arguments
data |
A |
... |
These dots are for future extensions and must be empty. |
type |
A string indicates the plot type, |
center |
A boolean value. if |
tree_type |
A single string, one of
Usually, you don't need to modify this. |
tip_pos |
The x-coordinates of the tip. Must be the same length
of the number of tips in |
data_arg |
The argument name for |
call |
The execution environment where |
Value
A data frame
with the node coordinates:
-
.index
: the original index in the tree for the the tip/node. -
label
: the tip/node label text. -
x
andy
: x-axis and y-axis coordinates for the tip/node. -
tip
: A logical value indicates whether current node is a tip.
ggalign attributes
edge
: A data frame
for edge coordinates:
-
x
andy
: x-axis and y-axis coordinates for the start node of the edge. -
xend
andyend
: the x-axis and y-axis coordinates of the terminal node for edge.
See Also
Other fortify_data_frame()
methods:
fortify_data_frame.character()
,
fortify_data_frame.default()
,
fortify_data_frame.dendrogram()
,
fortify_data_frame.matrix()