plotClusterLog10 {doblin} | R Documentation |
Plot individual barcode frequencies (log10) for a single cluster
Description
Plots all barcodes in a cluster on a log10 y-scale, along with the LOESS-smoothed average trajectory.
Usage
plotClusterLog10(
df,
cluster,
color,
tf,
effective.breaks,
output_directory,
input_name
)
Arguments
df |
A dataframe containing barcode frequencies in a single cluster. |
cluster |
The cluster ID (numeric or character). |
color |
A color code to use for the cluster. |
tf |
A dataframe containing the LOESS-smoothed trajectory for the cluster. |
effective.breaks |
A vector of time points used as breaks on the x-axis. |
output_directory |
A string specifying the directory where plots will be saved. |
input_name |
A string used as the base name for output files (e.g., "replicate1"). |
Value
A ggplot object showing the log10-transformed barcode frequencies and the LOESS-smoothed average trajectory for a single cluster.
[Package doblin version 0.1.1 Index]