getCharacterizationDemographics {OhdsiReportGenerator}R Documentation

Extract the binary age groups for the cases and targets

Description

This function extracts the age group feature extraction results for cases and targets corresponding to specified target and outcome cohorts.

Usage

getCharacterizationDemographics(
  connectionHandler,
  schema,
  cTablePrefix = "c_",
  cgTablePrefix = "cg_",
  databaseTable = "database_meta_data",
  targetId = NULL,
  outcomeId = NULL,
  type = "age"
)

Arguments

connectionHandler

A connection handler that connects to the database and extracts sql queries. Create a connection handler via 'ResultModelManager::ConnectionHandler$new()'.

schema

The result database schema (e.g., 'main' for sqlite)

cTablePrefix

The prefix used for the characterization results tables

cgTablePrefix

The prefix used for the cohort generator results tables

databaseTable

The name of the table with the database details (default 'database_meta_data')

targetId

An integer corresponding to the target cohort ID

outcomeId

Am integer corresponding to the outcome cohort ID

type

A character of 'age' or 'sex'

Details

Specify the connectionHandler, the schema and the target/outcome cohort IDs

Value

Returns a data.frame with the columns:

See Also

Other Characterization: getBinaryCaseSeries(), getBinaryRiskFactors(), getCaseBinaryFeatures(), getCaseContinuousFeatures(), getCaseCounts(), getContinuousCaseSeries(), getContinuousRiskFactors(), getDechallengeRechallenge(), getIncidenceRates(), getTargetBinaryFeatures(), getTargetContinuousFeatures(), getTargetCounts(), getTimeToEvent(), plotAgeDistributions(), plotSexDistributions()

Examples

# example code

conDet <- getExampleConnectionDetails()

connectionHandler <- ResultModelManager::ConnectionHandler$new(conDet)

ageData <- getCharacterizationDemographics(
connectionHandler = connectionHandler, 
schema = 'main'
)


[Package OhdsiReportGenerator version 1.1.1 Index]