ccViolin {circlizePlus} | R Documentation |
Draw violin plots
Description
Object ccCellGeom will call the function circlize::circos.violin while drawing.
Usage
ccViolin(
value,
pos,
violin_width = 0.8,
col = NA,
border = "black",
lwd = par("lwd"),
lty = par("lty"),
show_quantile = TRUE,
pt.col = par("col"),
cex = par("cex"),
pch = 16,
max_density = NULL
)
Arguments
value |
A numeric vector, a matrix or a list. If it is a matrix, boxplots are made by columns. |
pos |
Positions of the boxes. |
violin_width |
Width of violins. |
col |
Filled color of boxes. |
border |
Color for the border as well as the quantile lines. |
lwd |
Line width. |
lty |
Line style |
show_quantile |
Whether to show the quantile lines. |
pt.col |
Point color |
cex |
Point size. |
pch |
Point type. |
max_density |
The maximal density value across several violins. It is used to compare between violins. |
Value
Object ccCellGeom
Examples
library(circlizePlus)
cc <- ccPlot(sectors = letters[1:4], xlim = c(0, 10))
track <- ccTrack(ylim = c(0, 1))
cell <- ccCell(sector.index = "a") + ccViolin(value = replicate(runif(10),
n = 10, simplify = FALSE), pos = 1:10 - 0.5, col = 1:10)
track <- track + cell
cc + track
[Package circlizePlus version 0.9.1 Index]