jpinfect-package {jpinfect} | R Documentation |
jpinfect: Japan Institute for Health Security Infectious Disease Data in R
Description
This package provides functions to download and post-process infectious disease data from the Japan Institute for Health Security.
Main Functions
-
jpinfect_url_confirmed()
: Display dataset URLs of Confirmed Cases based on Infectious Diseases Weekly Report (IDWR) -
jpinfect_url_bullet()
: Display Infectious Diseases Weekly Report (IDWR) URLs -
jpinfect_get_confirmed()
: Download the confirmed case datasets from the Japan Institute for Health Security (JIHS) -
jpinfect_get_bullet()
: Download the bullet reports from the Japan Institute for Health Security (JIHS) -
jpinfect_read_confirmed()
: Import one year or more years of confirmed dataset -
jpinfect_read_bullet()
: Import one week or more weeks of bullet reports -
jpinfect_merge()
: Merge multiple disease datasets into a unified data table -
jpinfect_pivot()
: Convert data from wide format to long format for easier analysis
Author(s)
Maintainer: Tomonori Hoshi tomonori.hoshi.japan@gmail.com
Authors:
Erina Ishigaki Erina.Ishigaki1@alumni.lshtm.ac.uk
Satoshi Kaneko skaneko@nagasaki-u.ac.jp
See Also
Useful links:
Report bugs at https://github.com/TomonoriHoshi/jpinfect/issues