extract_run {dpcR} | R Documentation |
Extract Digital PCR Run
Description
Extract runs from a dpcr
object while preserving all other
attributes.
Usage
extract_run(input, id)
Arguments
input |
|
id |
vector of indices or names of runs. |
Details
The extract_run
function allows to choose one or more panels from an
object of the adpcr
or dpcr
class
and save it without changing other attributes. It is the most recommended
method of extracting a subset from an array of panels, because it preserves
class and structure of the object in contrary to standard operator
Extract.
Value
The object of the input's class (adpcr
or
dpcr
).
Note
The standard Extract
operator x[i]
treats
dpcr objects as matrix
and extracts values without preserving other
attributies of the object.
Author(s)
Michal Burdukiewicz.
See Also
Opposite function: bind_dpcr
Extract multiple runs belonging to an experiment of assay:
extract_dpcr
Examples
#sample extracting
panels <- sim_adpcr(10, 40, 1000, pos_sums = FALSE, n_panels = 50)
single_panel <- extract_run(panels, 5)
random_three <- extract_run(panels, sample.int(ncol(panels), 3))
all_but_one <- extract_run(panels, -5)
#the same for fluorescence data
fluos <- sim_dpcr(10, 40, 1000, pos_sums = FALSE, n_exp = 50,
fluo = list(0.1, 0))
single_fluo <- extract_run(fluos, 5)
[Package dpcR version 0.6 Index]